View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14396_high_11 (Length: 226)
Name: NF14396_high_11
Description: NF14396
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14396_high_11 |
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Alignment Details
Target: chr4 (Bit Score: 176; Significance: 6e-95; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 24058711 - 24058500
Alignment:
| Q |
1 |
ttttttcaatccagttgatttacaagatcattcccttccaccattgtagcttgcatcgtttgatat-atatggaactccaccacgtccctcacgttgctt |
99 |
Q |
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| T |
24058711 |
tttttacaatccaattgatttacaagatcattcccttccaccattgtagcttgcatcatttaatttgatatggaactccaccacgtccctcacgttgctt |
24058612 |
T |
|
| Q |
100 |
atgttgccattataagagttggtaagacat-tttactatgggaaaattacactaatcactgctcaccgtttatgtgaatatatcacatctccactctatt |
198 |
Q |
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| T |
24058611 |
atgttgccattataagagttggtaagacatgtttactatgggaaaattacactaatcactgctcaccgtttatgtgaatatatcacatctccactctatt |
24058512 |
T |
|
| Q |
199 |
ttataactcaac |
210 |
Q |
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|||||||||||| |
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| T |
24058511 |
ttataactcaac |
24058500 |
T |
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