View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14396_low_5 (Length: 273)
Name: NF14396_low_5
Description: NF14396
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14396_low_5 |
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Alignment Details
Target: chr1 (Bit Score: 256; Significance: 1e-142; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 10821875 - 10822130
Alignment:
| Q |
1 |
tattatattagtatacctcaaaatcatttaatttgatagtatgcttttaaccattaatttgacaatatgttcatttttaatgcatacatgaaaagagtta |
100 |
Q |
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| T |
10821875 |
tattatattagtatacctcaaaatcatttaatttgatagtatgcttttaaccattaatttgacaatatgttcatttttaatgcatacatgaaaagagtta |
10821974 |
T |
|
| Q |
101 |
tatatgattgttatatttaaccaactgctcacatgaaagcaaacaattagaatggacaatcgacaattagaatattttctattaaatataccaaaaagga |
200 |
Q |
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| T |
10821975 |
tatatgattgttatatttaaccaactgctcacatgaaagcaaacaattagaatggacaatcgacaattagaatattttctattaaatataccaaaaagga |
10822074 |
T |
|
| Q |
201 |
ttcaaaaatcgacaatgtcatcataagtctacttcaattgagatggagtaatgtat |
256 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10822075 |
ttcaaaaatcgacaatgtcatcataagtctacttcaattgagatggagtaatgtat |
10822130 |
T |
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