View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14397_low_13 (Length: 238)
Name: NF14397_low_13
Description: NF14397
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14397_low_13 |
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Alignment Details
Target: chr7 (Bit Score: 152; Significance: 1e-80; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 11 - 222
Target Start/End: Original strand, 36126855 - 36127049
Alignment:
| Q |
11 |
cacagacacacacacaattactaacaacgattaaataactaaaccttcgcaaaactaaaaccttcaccagtcataccatacctgcatttttgcatctcaa |
110 |
Q |
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| T |
36126855 |
cacagacacacacacaattactaacaacgattaaataactaaac-----------------cttcaccagtcataccatacctgcatttttgcatctcaa |
36126937 |
T |
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| Q |
111 |
aaaacaaaccacgtgcctgatccgttctattatgcctagcatgcaacctaatcatcatgttgtacatatctgttctggcacaataatttttctgattctt |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
36126938 |
aaaacaaaccacgtgcctgatccgttctattatgcctagcatgcaacctaatcatcatgttgtatatatctgttctggcacaataatttttctgattctt |
36127037 |
T |
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