View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14397_low_4 (Length: 491)
Name: NF14397_low_4
Description: NF14397
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14397_low_4 |
 |  |
|
| [»] scaffold0016 (1 HSPs) |
 |  |  |
|
| [»] scaffold0153 (1 HSPs) |
 |  |  |
|
| [»] scaffold0237 (1 HSPs) |
 |  |  |
|
| [»] scaffold0202 (1 HSPs) |
 |  |  |
|
| [»] scaffold0472 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr1 (Bit Score: 275; Significance: 1e-153; HSPs: 15)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 275; E-Value: 1e-153
Query Start/End: Original strand, 19 - 472
Target Start/End: Complemental strand, 1928335 - 1927882
Alignment:
| Q |
19 |
cagtagtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtg |
118 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1928335 |
cagtggtattcaattcagattttgcacaacttaaaaattgtctattggtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtg |
1928236 |
T |
 |
| Q |
119 |
agactttttaatgtaaaatgcatctactaacaatctcacacctagccttgagacttttttgtctcccgcacatagtcttgagannnnnnnnaattgcttc |
218 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| | ||||||| |
|
|
| T |
1928235 |
agactttttagtgtaaaatgcatctactaacaatctcacacctagccttgtgacttttttgtctcccacacatagtcttgagattttttttagttgcttc |
1928136 |
T |
 |
| Q |
219 |
tcgttattttcnnnnnnnacagtagttgcttctcgagtctcgacgttgctgttcacattccagtccnnnnnnntaaatcttcctgcacacgttatatagt |
318 |
Q |
| |
|
||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||| |
|
|
| T |
1928135 |
tcgttattttc-ttttttatggtagttgcttctcgagtctcgacgttgctgttcacgttccagtcccaaaaaaaaaatcttcctgcacacgttacatagt |
1928037 |
T |
 |
| Q |
319 |
tatcacatttcacttaaaaatattatagattttactgttctttagcaattttgtacaagt-aannnnnnnactaatatcatttttatcaagttataaagt |
417 |
Q |
| |
|
||||||||||||||| ||| | ||| ||||||||||||||||||||| |||||| ||||| | ||||||||||||||||| |||||||||||| |
|
|
| T |
1928036 |
tatcacatttcactttaaagttttacagattttactgttctttagcagttttgtgcaagtcattttttttactaatatcatttttatgaagttataaagt |
1927937 |
T |
 |
| Q |
418 |
tttgtgcaagcagtaaaatatgaacaatatcattaaaatataaaatatcaaaatg |
472 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
1927936 |
tttgtgcaagcagtaaaatatgaacaatatcattaaaatataaaatataaaaatg |
1927882 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 24 - 201
Target Start/End: Original strand, 29208913 - 29209090
Alignment:
| Q |
24 |
gtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtgagact |
123 |
Q |
| |
|
|||||||||| ||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
29208913 |
gtattcaattgagattttacacaacttaaaaattgtctattggtattcaaagttctaaggattttaatggattgttgtgagtaatggattttgtgagact |
29209012 |
T |
 |
| Q |
124 |
ttttaatgtaaaatgcatctactaacaatctcacacctagccttgagacttttttgtctcccgcacatagtcttgaga |
201 |
Q |
| |
|
||||| ||||| || |||||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |
|
|
| T |
29209013 |
ttttagtgtaacatatatctaccaacaatctcacacctagccttgagacttttttgtctcccacacatagccttgaga |
29209090 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 19 - 192
Target Start/End: Original strand, 36402400 - 36402573
Alignment:
| Q |
19 |
cagtagtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtg |
118 |
Q |
| |
|
|||| |||||||||| |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
36402400 |
cagtggtattcaattgagattttgcacaacttaaaaattgtctattggtattcaaaattgtaaggattttaatggattgttgtgagtaatggattttgtg |
36402499 |
T |
 |
| Q |
119 |
agactttttaatgtaaaatgcatctactaacaatctcacacctagccttgagacttttttgtctcccgcacata |
192 |
Q |
| |
|
|||||||||| ||||||||| | ||||||||||||||||| ||| |||||||||||||||||||||| |||||| |
|
|
| T |
36402500 |
agactttttagtgtaaaatgtacctactaacaatctcacatctaaccttgagacttttttgtctcccacacata |
36402573 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 19 - 193
Target Start/End: Original strand, 10896953 - 10897127
Alignment:
| Q |
19 |
cagtagtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtg |
118 |
Q |
| |
|
|||| |||||||||| ||||||||| |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10896953 |
cagtggtattcaattgagattttgcccaacttaaaaattgtctattggtattcaaaattggtaggattttaatggattgttatgagtaatggattttgtg |
10897052 |
T |
 |
| Q |
119 |
agactttttaatgtaaaatgcatctactaacaatctcacacctagccttgagacttttttgtctcccgcacatag |
193 |
Q |
| |
|
| || ||||||||||||||| | ||||||||||||||||||||| |||||| ||||||||||||| | ||||||| |
|
|
| T |
10897053 |
aaacattttaatgtaaaatgtacctactaacaatctcacacctaaccttgacacttttttgtctctcacacatag |
10897127 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 33243241 - 33243063
Alignment:
| Q |
19 |
cagtagtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtg |
118 |
Q |
| |
|
|||| |||||||||| |||||||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
33243241 |
cagtggtattcaattgagattttgtacaacttaaaaattgtctattggtattcaaaattgtaaggattttaatggattgttgtgagtaatggattttgtg |
33243142 |
T |
 |
| Q |
119 |
agactttttaatgtaaaatgcatctactaacaatctcacacctagccttgagacttttttgtctcccgcacatagtcttgaga |
201 |
Q |
| |
|
| ||||||||||||||| || | ||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||| |
|
|
| T |
33243141 |
aaactttttaatgtaaattgtacctactaacaatctcacaccta----agagacttttttgtctcccacacatagccttgaga |
33243063 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 33263414 - 33263236
Alignment:
| Q |
19 |
cagtagtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtg |
118 |
Q |
| |
|
|||| |||||||||| |||||||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
33263414 |
cagtggtattcaattgagattttgtacaacttaaaaattgtctattggtattcaaaattgtaaggattttaatggattgttgtgagtaatggattttgtg |
33263315 |
T |
 |
| Q |
119 |
agactttttaatgtaaaatgcatctactaacaatctcacacctagccttgagacttttttgtctcccgcacatagtcttgaga |
201 |
Q |
| |
|
| ||||||||||||||| || | ||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||| |
|
|
| T |
33263314 |
aaactttttaatgtaaattgtacctactaacaatctcacaccta----agagacttttttgtctcccacacatagccttgaga |
33263236 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 45318613 - 45318795
Alignment:
| Q |
19 |
cagtagtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtg |
118 |
Q |
| |
|
|||| |||||||||| |||||||||| ||||||||||||||||| | |||||||||| |||| |||||||||||||||||| |||||||||||||||||| |
|
|
| T |
45318613 |
cagtggtattcaattgagattttgcataacttaaaaattgtctactggtattcaaaactctacggattttaatggattgttgtgagtaatggattttgtg |
45318712 |
T |
 |
| Q |
119 |
agactttttaatgtaaaatgcatctactaacaatctcacacctagccttgagacttttttgtctcccgcacatagtcttgaga |
201 |
Q |
| |
|
||| | |||| ||||||||| | ||||||||||||||||||||| ||||||||||||||| || ||| ||||||| ||||||| |
|
|
| T |
45318713 |
agattgtttagtgtaaaatgtacctactaacaatctcacacctaaccttgagacttttttatcacccacacatagccttgaga |
45318795 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 26882757 - 26882575
Alignment:
| Q |
19 |
cagtagtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtg |
118 |
Q |
| |
|
|||| |||||||||| |||||||||| ||||||||||||||||| | |||||||||| |||| ||||||||||||||||| |||||||||||||||||| |
|
|
| T |
26882757 |
cagtggtattcaattgagattttgcataacttaaaaattgtctactggtattcaaaactctacagattttaatggattgttgtgagtaatggattttgtg |
26882658 |
T |
 |
| Q |
119 |
agactttttaatgtaaaatgcatctactaacaatctcacacctagccttgagacttttttgtctcccgcacatagtcttgaga |
201 |
Q |
| |
|
||| | |||| ||||||||| || |||||||||||||||||||||||||||||||||| | || ||| ||||||| ||||||| |
|
|
| T |
26882657 |
agattgtttagtgtaaaatgtatatactaacaatctcacacctagccttgagacttttctatcacccacacatagccttgaga |
26882575 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 52705546 - 52705728
Alignment:
| Q |
19 |
cagtagtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtg |
118 |
Q |
| |
|
|||| |||||||||| |||||||||| ||||||||||||||||| | |||||||||| |||| |||||||||||||||||| |||||||||||||||||| |
|
|
| T |
52705546 |
cagtggtattcaattgagattttgcataacttaaaaattgtctactggtattcaaaactctacggattttaatggattgttgtgagtaatggattttgtg |
52705645 |
T |
 |
| Q |
119 |
agactttttaatgtaaaatgcatctactaacaatctcacacctagccttgagacttttttgtctcccgcacatagtcttgaga |
201 |
Q |
| |
|
||| | ||| ||||||||| | ||||||||||||||| ||||||||| |||||||| | |||||| ||||||| ||||||| |
|
|
| T |
52705646 |
agattgtttggtgtaaaatgtacttactaacaatctcacgcctagccttaagacttttctatctcccacacatagccttgaga |
52705728 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 79 - 167
Target Start/End: Original strand, 9831779 - 9831867
Alignment:
| Q |
79 |
taaggattttaatggattgttatgagtaatggattttgtgagactttttaatgtaaaatgcatctactaacaatctcacacctagcctt |
167 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||| |||| |
|
|
| T |
9831779 |
taaggattttaatggattgttgtgagtaatggattttgtgagactttttagtgtaaaatatacttactaacaatctcacacctaacctt |
9831867 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 83 - 171
Target Start/End: Original strand, 45535001 - 45535089
Alignment:
| Q |
83 |
gattttaatggattgttatgagtaatggattttgtgagactttttaatgtaaaatgcatctactaacaatctcacacctagccttgaga |
171 |
Q |
| |
|
||||||||||||||||| ||||||||||||||| ||||| | || | ||||||||| | |||||||||||||||||| ||||||||||| |
|
|
| T |
45535001 |
gattttaatggattgttgtgagtaatggattttttgagattgttgagtgtaaaatgtacctactaacaatctcacacgtagccttgaga |
45535089 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 9831443 - 9831501
Alignment:
| Q |
19 |
cagtagtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaatt |
77 |
Q |
| |
|
|||| |||||||||| ||||||||||||||||| |||||||||||| |||||||||||| |
|
|
| T |
9831443 |
cagtggtattcaattgagattttgcacaacttacaaattgtctattggtattcaaaatt |
9831501 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 128
Target Start/End: Original strand, 42657873 - 42657976
Alignment:
| Q |
24 |
gtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtgagact |
123 |
Q |
| |
|
|||||||||| |||||| ||||||||| ||| |||| ||| |||||||||| |||||| ||||| ||||||| || | | |||||||||| ||||||| |
|
|
| T |
42657873 |
gtattcaattaggatttttcacaacttataaaatgtccattggtattcaaaaatctaag-attttgatggattcttctatggaatggattttatgagact |
42657971 |
T |
 |
| Q |
124 |
tttta |
128 |
Q |
| |
|
||||| |
|
|
| T |
42657972 |
tttta |
42657976 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 19007506 - 19007402
Alignment:
| Q |
24 |
gtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtgagact |
123 |
Q |
| |
|
|||||||||| |||||| || ||||| ||||||||||| ||||| |||| |||| |||||| ||||||| || | |||||||||||||||||| |
|
|
| T |
19007506 |
gtattcaattgagatttctcatgacttatgaattgtctattggtattaaaaagtctatagattttgatggattcttggatggaatggattttgtgagact |
19007407 |
T |
 |
| Q |
124 |
tttta |
128 |
Q |
| |
|
||||| |
|
|
| T |
19007406 |
tttta |
19007402 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 24 - 128
Target Start/End: Original strand, 48194748 - 48194852
Alignment:
| Q |
24 |
gtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtgagact |
123 |
Q |
| |
|
|||||||||| |||||| || ||||| ||||||| ||| |||||||||| |||| |||||| ||||||| || | |||||||||||||||||| |
|
|
| T |
48194748 |
gtattcaattgagatttctcatgacttatgaattgtccattggtattcaaaagtctatagattttgatggattcttggatggaatggattttgtgagact |
48194847 |
T |
 |
| Q |
124 |
tttta |
128 |
Q |
| |
|
||||| |
|
|
| T |
48194848 |
tttta |
48194852 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 210; Significance: 1e-115; HSPs: 11)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 24 - 472
Target Start/End: Original strand, 30878010 - 30878436
Alignment:
| Q |
24 |
gtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtgagact |
123 |
Q |
| |
|
||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30878010 |
gtattcaattcagattttgtacagcttaaaaattgtctattggtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtgagact |
30878109 |
T |
 |
| Q |
124 |
ttttaatgtaaaatgcatctactaacaatctcacacctagccttgagacttttttgtctcccgcacatagtcttgagannnnnnnnaattgcttctcgtt |
223 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| | |||||||||||| |
|
|
| T |
30878110 |
ttttagtgtaaaatgcatctactaacaatctcacatctagccttgagacttttttgtctcccacacatagtcttgaga-tttttttagttgcttctcgtt |
30878208 |
T |
 |
| Q |
224 |
attttcnnnnnnnacagtagttgcttctcgagtctcgacgttgctgttcacattccagtccnnnnnnntaaatcttcctgcacacgttatatagttatca |
323 |
Q |
| |
|
|||||| || ||||||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||| || | |||||||||| |
|
|
| T |
30878209 |
attttc-ttttttacggtagttgcttctcgagtctcgacgttgctgttcacgttccagtcccaaaaaaaaaatctt-ctgcacaggtaacatagttatca |
30878306 |
T |
 |
| Q |
324 |
catttcacttaaaaatattatagattttactgttctttagcaattttgtacaagtaannnnnnnactaatatcatttttatcaagttataaagttttgtg |
423 |
Q |
| |
|
||||| |||||||||||||||||| |||||| ||||| | ||||||||||||||||| |||||||||||||||||| |
|
|
| T |
30878307 |
cattt-------------------ttttactgttctttagcagttttgtgcaagtcatttttttactaatatcatttttatgaagttataaagttttgtg |
30878387 |
T |
 |
| Q |
424 |
caagcagtaaaatatgaacaatatcattaaaatataaaatatcaaaatg |
472 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
30878388 |
caagcagtaaaatatgaacaatatcattaaaatataaaatataaaaatg |
30878436 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 6476644 - 6476462
Alignment:
| Q |
19 |
cagtagtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtg |
118 |
Q |
| |
|
|||| |||||||||| |||||||||| ||||||||||||||||| |||||||||||| |||| |||||||||||||||||| |||||||||||||||||| |
|
|
| T |
6476644 |
cagtggtattcaattgagattttgcataacttaaaaattgtctactagtattcaaaactctacggattttaatggattgttgtgagtaatggattttgtg |
6476545 |
T |
 |
| Q |
119 |
agactttttaatgtaaaatgcatctactaacaatctcacacctagccttgagacttttttgtctcccgcacatagtcttgaga |
201 |
Q |
| |
|
||| | |||| ||||||||| | ||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||| |
|
|
| T |
6476544 |
agattgtttagtgtaaaatgtaactactaacaatctcacacctagccttgagacttttctgtctcccacacatagccttgaga |
6476462 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 19 - 193
Target Start/End: Complemental strand, 10643945 - 10643769
Alignment:
| Q |
19 |
cagtagtattcaattcagattttg--cacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttg |
116 |
Q |
| |
|
|||| |||||||||| |||||||| |||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
10643945 |
cagtggtattcaattgagattttgatcacaacttaaaaattgtctattggtaatcaaaattgtaaggattttaatggattgttgtgagtaatggattttg |
10643846 |
T |
 |
| Q |
117 |
tgagactttttaatgtaaaatgcatctactaacaatctcacacctagccttgagacttttttgtctcccgcacatag |
193 |
Q |
| |
|
|||||||||||| ||||||||| | ||||||||||||||||||||| ||| ||||||||||||||||| ||||||| |
|
|
| T |
10643845 |
tgagactttttagtgtaaaatgtacctactaacaatctcacacctaatcttaagacttttttgtctcccacacatag |
10643769 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 19 - 171
Target Start/End: Complemental strand, 29834216 - 29834064
Alignment:
| Q |
19 |
cagtagtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtg |
118 |
Q |
| |
|
|||| |||||||||| |||||||||| |||||||||||||||||| |||||||||| |||| |||||||||||||||||| ||||||||||||||| || |
|
|
| T |
29834216 |
cagtggtattcaattgagattttgcataacttaaaaattgtctatcggtattcaaaactctacggattttaatggattgttgtgagtaatggattttatg |
29834117 |
T |
 |
| Q |
119 |
agactttttaatgtaaaatgcatctactaacaatctcacacctagccttgaga |
171 |
Q |
| |
|
||| | |||| ||||||||| | ||||||||||||||||||||| |||||||| |
|
|
| T |
29834116 |
agattgtttagtgtaaaatgtacctactaacaatctcacacctaaccttgaga |
29834064 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 19 - 171
Target Start/End: Complemental strand, 29865650 - 29865498
Alignment:
| Q |
19 |
cagtagtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtg |
118 |
Q |
| |
|
|||| |||||||||| |||||||||| |||||||||||||||||| |||||||||| |||| |||||||||||||||||| ||||||||||||||| || |
|
|
| T |
29865650 |
cagtggtattcaattgagattttgcataacttaaaaattgtctatcggtattcaaaactctacggattttaatggattgttgtgagtaatggattttatg |
29865551 |
T |
 |
| Q |
119 |
agactttttaatgtaaaatgcatctactaacaatctcacacctagccttgaga |
171 |
Q |
| |
|
||| | |||| ||||||||| | ||||||||||||||||||||| |||||||| |
|
|
| T |
29865550 |
agattgtttagtgtaaaatgtacctactaacaatctcacacctaaccttgaga |
29865498 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 24 - 126
Target Start/End: Complemental strand, 7858300 - 7858198
Alignment:
| Q |
24 |
gtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtgagact |
123 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||| |||||||| |||||||||||||| |
|
|
| T |
7858300 |
gtattcaattgagattttgcacaacttaaaaattgtctattgatattcaaaattctacggattttaatgcattgttgtgagtaatagattttgtgagact |
7858201 |
T |
 |
| Q |
124 |
ttt |
126 |
Q |
| |
|
||| |
|
|
| T |
7858200 |
ttt |
7858198 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 25 - 193
Target Start/End: Complemental strand, 3110210 - 3110042
Alignment:
| Q |
25 |
tattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtgagactt |
124 |
Q |
| |
|
||||||||| ||||||||| ||||| |||||||| | ||||||||| |||| |||||||||||||||||| ||||||||||||||||||||| | |
|
|
| T |
3110210 |
tattcaattgagattttgcctaacttgaaaattgtgtgcagttattcaaaactctacggattttaatggattgttgtgagtaatggattttgtgagattg |
3110111 |
T |
 |
| Q |
125 |
tttaatgtaaaatgcatctactaacaatctcacacctagccttgagacttttttgtctcccgcacatag |
193 |
Q |
| |
|
|||| ||||||||| | |||| |||||||| ||||||| || |||||||| | |||||| ||||||| |
|
|
| T |
3110110 |
tttagtgtaaaatgtacatactgacaatctcgcacctagtattaagacttttctatctcccacacatag |
3110042 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 54 - 128
Target Start/End: Original strand, 709102 - 709176
Alignment:
| Q |
54 |
aattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtgagacttttta |
128 |
Q |
| |
|
||||||||||| |||||||||| |||| |||||| ||||||| || ||||||||||||||||||||||||| |
|
|
| T |
709102 |
aattgtctattggtattcaaaagtctatagattttgatggattcttggatgtaatggattttgtgagacttttta |
709176 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 128
Target Start/End: Original strand, 5957287 - 5957391
Alignment:
| Q |
24 |
gtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtgagact |
123 |
Q |
| |
|
|||||||||| |||||| || ||||| ||||||||||| |||||||||| |||| ||||||||| ||| || | ||||||||||||||||||| |
|
|
| T |
5957287 |
gtattcaattaagatttctcatgacttatgaattgtctattggtattcaaaagtctatagattttaatatattttttcgtataatggattttgtgagact |
5957386 |
T |
 |
| Q |
124 |
tttta |
128 |
Q |
| |
|
||||| |
|
|
| T |
5957387 |
tttta |
5957391 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 24 - 128
Target Start/End: Original strand, 7100322 - 7100426
Alignment:
| Q |
24 |
gtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtgagact |
123 |
Q |
| |
|
|||||||||| |||||| || ||||| ||||||| ||| |||||||||| |||| |||||| ||||||| || | |||||||||||||||||| |
|
|
| T |
7100322 |
gtattcaattgagatttctcatgacttatgaattgtccattggtattcaaaagtctatagattttgatggattcttggatggaatggattttgtgagact |
7100421 |
T |
 |
| Q |
124 |
tttta |
128 |
Q |
| |
|
||||| |
|
|
| T |
7100422 |
tttta |
7100426 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 8794308 - 8794204
Alignment:
| Q |
24 |
gtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtgagact |
123 |
Q |
| |
|
|||||||||| |||||| || ||||| ||||||| ||| |||||||||| |||| |||||| ||||||| || | |||||||||||||||||| |
|
|
| T |
8794308 |
gtattcaattgagatttctcatgacttatgaattgtccattggtattcaaaagtctatagattttgatggattcttggatggaatggattttgtgagact |
8794209 |
T |
 |
| Q |
124 |
tttta |
128 |
Q |
| |
|
||||| |
|
|
| T |
8794208 |
tttta |
8794204 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 201; Significance: 1e-109; HSPs: 13)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 16 - 472
Target Start/End: Complemental strand, 20157691 - 20157255
Alignment:
| Q |
16 |
attcagtagtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggatttt |
115 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
20157691 |
attcagtggtattcaattcagattttgcacaacttaaatattgtctattggtattcaaaattctaaggattttaatagattgttatgagtaatggatttt |
20157592 |
T |
 |
| Q |
116 |
gtgagactttttaatgtaaaatgcatctactaacaatctcacacctagccttgagacttttttgtctcccgcacatagtcttgagannnnnnnnaattgc |
215 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| | |||| |
|
|
| T |
20157591 |
gtgagactttttagtgtaaaatgcatctactaacaatctcacacctagctttgagacttttttgtctcccacacatagtcttgagattttttttagttgc |
20157492 |
T |
 |
| Q |
216 |
ttctcgttattttcnnnnnnnacagtagttgcttctcgagtctcgacgttgctgttcacattccagtcc-nnnnnnntaaatcttcctgcacacgttata |
314 |
Q |
| |
|
|||||||||||||| || | ||||||||||||||||||||| ||| ||||||| ||| ||||| |||||||||||||||||| | | |
|
|
| T |
20157491 |
ttctcgttattttc-ttttttacggaagttgcttctcgagtctcgacattgttgttcacgttcgagtccaaaaaaaaaaaatcttcctgcacacgtaaca |
20157393 |
T |
 |
| Q |
315 |
tagttatcacatttcacttaaaaatattatagattttactgttctttagcaattttgtacaagtaannnnnnnactaatatcatttttatcaagttataa |
414 |
Q |
| |
|
||||||||||||| |||||||||||||||||| |||||| ||||| | ||||||||||||||||| ||||||||| |
|
|
| T |
20157392 |
tagttatcacatt--------------------ttttactgttctttagcagttttgtgcaagtcatttttttactaatatcatttttatgaagttataa |
20157313 |
T |
 |
| Q |
415 |
agttttgtgcaagcagtaaaatatgaacaatatcattaaaatataaaatatcaaaatg |
472 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
20157312 |
agttttgtgcaatcagtaaaatatgaacaatatcattaaaatataaaatataaaaatg |
20157255 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 34028863 - 34028681
Alignment:
| Q |
19 |
cagtagtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtg |
118 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
34028863 |
cagtggtattcaattcagattttgcacaacttaaaaattgtctattggtattcaaaattataaggattttaatggattgttacgagtaatggattttgtg |
34028764 |
T |
 |
| Q |
119 |
agactttttaatgtaaaatgcatctactaacaatctcacacctagccttgagacttttttgtctcccgcacatagtcttgaga |
201 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| |
|
|
| T |
34028763 |
agactttttagtgtaaaatgcatctactaacaatctcacacctagccttgagacttttttgtctgccacacatagtcttgaga |
34028681 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 16 - 199
Target Start/End: Complemental strand, 24193420 - 24193237
Alignment:
| Q |
16 |
attcagtagtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggatttt |
115 |
Q |
| |
|
||||||| |||||||||| |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
24193420 |
attcagtggtattcaattgagattttgcacaacttaaaaattgtctattggtattcaaaattgtaaggattttaatggattgttgtgagtaatggatttt |
24193321 |
T |
 |
| Q |
116 |
gtgagactttttaatgtaaaatgcatctactaacaatctcacacctagccttgagacttttttgtctcccgcacatagtcttga |
199 |
Q |
| |
|
||||||||||||| ||||||||| | |||||||||||||||||| || |||||||||||||||||||||| ||||||||||||| |
|
|
| T |
24193320 |
gtgagactttttagtgtaaaatgtacctactaacaatctcacacttaaccttgagacttttttgtctcccacacatagtcttga |
24193237 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 26 - 193
Target Start/End: Original strand, 11534995 - 11535162
Alignment:
| Q |
26 |
attcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtgagacttt |
125 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
11534995 |
attcaattgagattttgcacaacttaaaaattgtctattggtattcaaaattgtaaggattttaatggattgttgtgagtaatggattttgtgagacttt |
11535094 |
T |
 |
| Q |
126 |
ttaatgtaaaatgcatctactaacaatctcacacctagccttgagacttttttgtctcccgcacatag |
193 |
Q |
| |
|
||| ||||||||| | |||||||||||||||||| || |||||||||||||||||||||| ||||||| |
|
|
| T |
11535095 |
ttagtgtaaaatgtacctactaacaatctcacacataaccttgagacttttttgtctcccacacatag |
11535162 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 24 - 199
Target Start/End: Complemental strand, 11998343 - 11998169
Alignment:
| Q |
24 |
gtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtgagact |
123 |
Q |
| |
|
|||||||||| ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
11998343 |
gtattcaattgagattttacacaacttaaaaattgtctattggtattcaaaattctaaggattttaatggtttgttgtgagtaatggattttgtgagact |
11998244 |
T |
 |
| Q |
124 |
ttttaatgtaaaatgcatctactaacaatctcacacctagccttgagacttttttgtctcccgcacatagtcttga |
199 |
Q |
| |
|
||||| ||||||||| |||||| |||||||||||||| |||||||||| ||||||||||||| ||||||| ||||| |
|
|
| T |
11998243 |
ttttagtgtaaaatgtatctaccaacaatctcacacc-agccttgagatttttttgtctcccacacatagccttga |
11998169 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 6289432 - 6289250
Alignment:
| Q |
19 |
cagtagtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtg |
118 |
Q |
| |
|
|||| |||||||||| |||||||||| |||||||||||||||| |||||||||||| |||| |||||||||||||||||| |||||||||||||||||| |
|
|
| T |
6289432 |
cagtggtattcaattgagattttgcataacttaaaaattgtctgctagtattcaaaactctacggattttaatggattgttgtgagtaatggattttgtg |
6289333 |
T |
 |
| Q |
119 |
agactttttaatgtaaaatgcatctactaacaatctcacacctagccttgagacttttttgtctcccgcacatagtcttgaga |
201 |
Q |
| |
|
||| | |||| ||||||||| | |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |
|
|
| T |
6289332 |
agattgtttagtgtaaaatgtacctactaacaatctcacacctagccttgagacttttttgtctcccacacatagccttgaga |
6289250 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 29941098 - 29941280
Alignment:
| Q |
19 |
cagtagtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtg |
118 |
Q |
| |
|
|||| |||||||||| |||||||||| ||||||||||||||||| | |||||||||| |||| |||||||||||||||||| |||||||||||||||||| |
|
|
| T |
29941098 |
cagtggtattcaattgagattttgcataacttaaaaattgtctactggtattcaaaactctacggattttaatggattgttgtgagtaatggattttgtg |
29941197 |
T |
 |
| Q |
119 |
agactttttaatgtaaaatgcatctactaacaatctcacacctagccttgagacttttttgtctcccgcacatagtcttgaga |
201 |
Q |
| |
|
||| | |||| ||||||||| | ||||||||||||||||||||||||||||||||||| | |||||| || |||| ||||||| |
|
|
| T |
29941198 |
agattgtttagtgtaaaatgtacctactaacaatctcacacctagccttgagacttttctatctcccacatatagccttgaga |
29941280 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 293 - 472
Target Start/End: Complemental strand, 34028615 - 34028435
Alignment:
| Q |
293 |
aaatcttcctgcacacgttatatagttatcacatttcacttaaaaatattatagattttactgttctttagcaattttgtacaagtaannnnnnn-acta |
391 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||| ||| | ||| ||||||||||||||||||||| |||||||||||| | |||| |
|
|
| T |
34028615 |
aaatcttcctgcacacgttacatagttatcacatttcactttaaagttttacagattttactgttctttagcagttttgtacaagtcattttttttacta |
34028516 |
T |
 |
| Q |
392 |
atatcatttttatcaagttataaagttttgtgcaagcagtaaaatatgaacaatatcattaaaatataaaatatcaaaatg |
472 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| |||||| |
|
|
| T |
34028515 |
atatcatttttatgaagttataaagttttgtgcaagcagtaaaatatgaacattatcattcaaatataaaatataaaaatg |
34028435 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 16 - 201
Target Start/End: Original strand, 45547081 - 45547266
Alignment:
| Q |
16 |
attcagtagtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggatttt |
115 |
Q |
| |
|
||||||| |||||||||| |||||| ||| ||||||||||||||||| | |||||||||| |||| |||||||||||||||||| | ||||||||||||| |
|
|
| T |
45547081 |
attcagtggtattcaattgagatttagcataacttaaaaattgtctactggtattcaaaactctacggattttaatggattgttgtaagtaatggatttt |
45547180 |
T |
 |
| Q |
116 |
gtgagactttttaatgtaaaatgcatctactaacaatctcacacctagccttgagacttttttgtctcccgcacatagtcttgaga |
201 |
Q |
| |
|
|||||| | |||| ||||||||| | ||||||||||||||||||||| ||||||||||||| | |||||| ||||||| ||||||| |
|
|
| T |
45547181 |
gtgagattgtttagtgtaaaatgtacctactaacaatctcacacctaaccttgagacttttatatctcccacacatagccttgaga |
45547266 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 24 - 185
Target Start/End: Original strand, 24193707 - 24193875
Alignment:
| Q |
24 |
gtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggatttt-------aatggattgttatgagtaatggattttg |
116 |
Q |
| |
|
|||||||||| ||||||||||||||||||||| ||| |||| ||||||||||||||| | ||||| ||||||||| | |||||||||||||||| |
|
|
| T |
24193707 |
gtattcaattgagattttgcacaacttaaaaactgtttattggtattcaaaattctacgaattttaatttttaatggattgctgtgagtaatggattttg |
24193806 |
T |
 |
| Q |
117 |
tgagactttttaatgtaaaatgcatctactaacaatctcacacctagccttgagacttttttgtctccc |
185 |
Q |
| |
|
|||||||||||| ||||||||| | |||||||||||||||||| |||||| |||||||| |||||||| |
|
|
| T |
24193807 |
tgagactttttagtgtaaaatgtacctactaacaatctcacacttagcctcaagacttttctgtctccc |
24193875 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 58 - 138
Target Start/End: Original strand, 45485543 - 45485623
Alignment:
| Q |
58 |
gtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtgagactttttaatgtaaaatg |
138 |
Q |
| |
|
||||| || |||||||||||||| |||||||||||||||||| ||||||||||||||||||||| | |||| |||||||| |
|
|
| T |
45485543 |
gtctactaatattcaaaattctatggattttaatggattgttgtgagtaatggattttgtgagattgtttagcgtaaaatg |
45485623 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 18176395 - 18176291
Alignment:
| Q |
24 |
gtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtgagact |
123 |
Q |
| |
|
|||||||||| ||||||| | | |||| ||| |||||||| |||||||||||||| |||||||||||||| | || | |||||||||||||||| |
|
|
| T |
18176395 |
gtattcaattgagattttataaatcttataaaatgtctattggtattcaaaattcttgagattttaatggattctattgtagagtggattttgtgagact |
18176296 |
T |
 |
| Q |
124 |
tttta |
128 |
Q |
| |
|
||||| |
|
|
| T |
18176295 |
tttta |
18176291 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 7488056 - 7487952
Alignment:
| Q |
24 |
gtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtgagact |
123 |
Q |
| |
|
|||||||||| |||||| | |||||| ||| ||||| | ||||| |||||| | ||||||||||||||| | || |||||||||| ||||||||| |
|
|
| T |
7488056 |
gtattcaattaagatttctaagaacttataaaatgtctcgtggtattgaaaattagacggattttaatggattcatttgtgtaatggattgtgtgagact |
7487957 |
T |
 |
| Q |
124 |
tttta |
128 |
Q |
| |
|
||||| |
|
|
| T |
7487956 |
tttta |
7487952 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 196; Significance: 1e-106; HSPs: 13)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 16 - 472
Target Start/End: Original strand, 40097244 - 40097679
Alignment:
| Q |
16 |
attcagtagtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggatttt |
115 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
40097244 |
attcagtggtattcaattcagattttgcacaacttaaaaattgtctattggtattcaaaattctaaggattttaatggattgttatgactaatggatttt |
40097343 |
T |
 |
| Q |
116 |
gtgagactttttaatgtaaaatgcatctactaacaatctcacacctagccttgagac-ttttttgtctcccgcacatagtcttgagannnnnnnnaattg |
214 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||| | ||| |
|
|
| T |
40097344 |
gtgagactttttaatgtaaaatgcatctactaacaatctcacacctagctttgagactttttttgtctcccacacatagtcttgagattttttttagttg |
40097443 |
T |
 |
| Q |
215 |
cttctcgttattttcnnnnnnnacagtagttgcttctcgagtctcgacgttgctgttcacattccagtccnnnnnnntaaatcttcctgcacacgttata |
314 |
Q |
| |
|
||||||||||||||| || |||| |||||||||||||||||||| ||||||| ||||||||| ||||||||||||||| || | | |
|
|
| T |
40097444 |
cttctcgttattttc-ttttttacgaaagttacttctcgagtctcgacgttgttgttcacgttccagtccaaaaaaa-aaatcttcctgcacaggtaaca |
40097541 |
T |
 |
| Q |
315 |
tagttatcacatttcacttaaaaatattatagattttactgttctttagcaattttgtacaagtaannnnnnnactaatatcatttttatcaagttataa |
414 |
Q |
| |
|
|||||||||||||| |||||||||||||||||| |||||| ||||| | ||||||||||||||||| ||||||||| |
|
|
| T |
40097542 |
tagttatcacattt-------------------ttttactgttctttagcagttttgtgcaagtcatttttttactaatatcatttttatgaagttataa |
40097622 |
T |
 |
| Q |
415 |
agttttgtgcaagcagtaaaatatgaacaatatcattaaaatataaaatatcaaaatg |
472 |
Q |
| |
|
|| ||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
40097623 |
ag-tttgtgcaatcagtaaaatatgaacaatatcattaaaatataaaatataaaaatg |
40097679 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 30110956 - 30111138
Alignment:
| Q |
19 |
cagtagtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtg |
118 |
Q |
| |
|
|||| |||||||||| |||||||||| |||||||||||||||| || ||||||||| |||| |||||||||||||||||| |||||||||||||||||| |
|
|
| T |
30110956 |
cagtggtattcaattgagattttgcataacttaaaaattgtctgctattattcaaaactctacggattttaatggattgttgtgagtaatggattttgtg |
30111055 |
T |
 |
| Q |
119 |
agactttttaatgtaaaatgcatctactaacaatctcacacctagccttgagacttttttgtctcccgcacatagtcttgaga |
201 |
Q |
| |
|
||| | |||| ||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||| ||||||| ||||||| |
|
|
| T |
30111056 |
agattgtttagtgtaaaatgtatctattaacaatctcacacctaaccttgagacttttttgtctcccacacatagccttgaga |
30111138 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 43057612 - 43057430
Alignment:
| Q |
19 |
cagtagtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtg |
118 |
Q |
| |
|
|||| |||||||||| |||||||||| ||||||||||||||||| | |||||||||| |||| |||||||||||||||||| |||||||||||||||||| |
|
|
| T |
43057612 |
cagtggtattcaattgagattttgcataacttaaaaattgtctactggtattcaaaactctacggattttaatggattgttgtgagtaatggattttgtg |
43057513 |
T |
 |
| Q |
119 |
agactttttaatgtaaaatgcatctactaacaatctcacacctagccttgagacttttttgtctcccgcacatagtcttgaga |
201 |
Q |
| |
|
||| | |||| ||||||||| | ||||||||||||||||||||||||||||||||||| | |||||| ||||||| ||||||| |
|
|
| T |
43057512 |
agattgtttagtgtaaaatgtacctactaacaatctcacacctagccttgagacttttctatctcccacacatagccttgaga |
43057430 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 19 - 193
Target Start/End: Original strand, 152011 - 152185
Alignment:
| Q |
19 |
cagtagtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtg |
118 |
Q |
| |
|
|||| |||||||||| |||||||||| ||||||||||||||||| | |||||||||| |||| |||||||||||||||||| |||||||||||||||||| |
|
|
| T |
152011 |
cagtggtattcaattgagattttgcataacttaaaaattgtctaatggtattcaaaactctacggattttaatggattgttgtgagtaatggattttgtg |
152110 |
T |
 |
| Q |
119 |
agactttttaatgtaaaatgcatctactaacaatctcacacctagccttgagacttttttgtctcccgcacatag |
193 |
Q |
| |
|
||| | |||| ||||||||| | ||||||||||||||||||||||||||||||||||| | |||||| ||||||| |
|
|
| T |
152111 |
agattgtttagtgtaaaatgtacctactaacaatctcacacctagccttgagacttttctatctcccacacatag |
152185 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 27418573 - 27418391
Alignment:
| Q |
19 |
cagtagtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtg |
118 |
Q |
| |
|
|||| |||||||||| |||||||||| |||||||||||||||| ||||| |||||| |||| |||||||||||||||||| |||||||||||||||||| |
|
|
| T |
27418573 |
cagtggtattcaattgagattttgcataacttaaaaattgtctgctagtaatcaaaactctacggattttaatggattgttgtgagtaatggattttgtg |
27418474 |
T |
 |
| Q |
119 |
agactttttaatgtaaaatgcatctactaacaatctcacacctagccttgagacttttttgtctcccgcacatagtcttgaga |
201 |
Q |
| |
|
||| | |||| ||||||||| ||||| ||||||||||||||||| |||||||||||||| ||||||| |||| || ||||||| |
|
|
| T |
27418473 |
agattgtttagtgtaaaatgtatctattaacaatctcacacctaaccttgagactttttggtctcccacacaaagccttgaga |
27418391 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 24 - 201
Target Start/End: Complemental strand, 35090032 - 35089855
Alignment:
| Q |
24 |
gtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtgagact |
123 |
Q |
| |
|
|||||||||| |||||||||| ||||||||||||||||| | |||||||||| |||| |||||||||||||||||| ||||||||| ||||||||||| | |
|
|
| T |
35090032 |
gtattcaattgagattttgcataacttaaaaattgtctactggtattcaaaactctacggattttaatggattgttgtgagtaatgaattttgtgagatt |
35089933 |
T |
 |
| Q |
124 |
ttttaatgtaaaatgcatctactaacaatctcacacctagccttgagacttttttgtctcccgcacatagtcttgaga |
201 |
Q |
| |
|
||| | ||||||| | ||||||||||||||||||||| ||||||||||||| | |||||| ||||||| ||||||| |
|
|
| T |
35089932 |
gtttggtataaaatgtacctactaacaatctcacacctaaccttgagacttttctatctcccacacatagccttgaga |
35089855 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 39301176 - 39301005
Alignment:
| Q |
19 |
cagtagtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtg |
118 |
Q |
| |
|
|||| |||||||||| |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||||||| ||||||||||| |
|
|
| T |
39301176 |
cagtggtattcaattgagattttgcacaacttaaaaattgtctattggtattcaaaattgtaaggattttaatagattgttgtgagtaatgga------- |
39301084 |
T |
 |
| Q |
119 |
agactttttaatgtaaaatgcatctactaacaatctcacacctagccttgagac-ttttttgtctcccgcacatagtcttgaga |
201 |
Q |
| |
|
||||||||||||||| | ||||||||||||||||||||| ||||||||| ||||||||||||| || |||| ||||||| |
|
|
| T |
39301083 |
-----ttttaatgtaaaatgtacctactaacaatctcacacctaaccttgagactttttttgtctcccacatatagccttgaga |
39301005 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 47914988 - 47914886
Alignment:
| Q |
19 |
cagtagtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtg |
118 |
Q |
| |
|
|||| |||||||||| |||||||||| |||||||||||||||| |||||||||||| |||| |||||| |||||||||| |||||||||||||||||| |
|
|
| T |
47914988 |
cagtggtattcaattgagattttgcataacttaaaaattgtctgctagtattcaaaactctacagatttttatggattgttgtgagtaatggattttgtg |
47914889 |
T |
 |
| Q |
119 |
aga |
121 |
Q |
| |
|
||| |
|
|
| T |
47914888 |
aga |
47914886 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 130 - 201
Target Start/End: Complemental strand, 47914149 - 47914078
Alignment:
| Q |
130 |
tgtaaaatgcatctactaacaatctcacacctagccttgagacttttttgtctcccgcacatagtcttgaga |
201 |
Q |
| |
|
||||||||| | |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |
|
|
| T |
47914149 |
tgtaaaatgtacctactaacaatctcacacctagccttgagacttttttgtctcccacacatagccttgaga |
47914078 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 42678119 - 42678015
Alignment:
| Q |
24 |
gtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtgagact |
123 |
Q |
| |
|
|||||||||| |||||| ||||||| ||| |||||||| |||||||||| ||| |||||||||||||| || || |||||||||| ||||||| |
|
|
| T |
42678119 |
gtattcaattaagatttgtaccaacttataaaatgtctattggtattcaaaaatctgcagattttaatggattcttttgtagaatggattttatgagact |
42678020 |
T |
 |
| Q |
124 |
tttta |
128 |
Q |
| |
|
||||| |
|
|
| T |
42678019 |
tttta |
42678015 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 46037276 - 46037172
Alignment:
| Q |
24 |
gtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtgagact |
123 |
Q |
| |
|
|||||||||| |||||| || ||||| ||||||||||| |||||||||| |||| |||||| ||||||| || | |||||||||||||||||| |
|
|
| T |
46037276 |
gtattcaattgagatttctcatgacttatgaattgtctattggtattcaaaagtctatagattttgatggattcttggatggaatggattttgtgagact |
46037177 |
T |
 |
| Q |
124 |
tttta |
128 |
Q |
| |
|
||||| |
|
|
| T |
46037176 |
tttta |
46037172 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 130
Target Start/End: Complemental strand, 34115378 - 34115293
Alignment:
| Q |
45 |
caacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtgagactttttaat |
130 |
Q |
| |
|
||||||| ||| ||| ||| |||||||||| ||| |||||||||||||| || || || ||||||||||||||||||||||| |
|
|
| T |
34115378 |
caacttataaaatgtttataggtattcaaaaatctgtagattttaatggattcttttgtatagtggattttgtgagactttttaat |
34115293 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 31494397 - 31494469
Alignment:
| Q |
24 |
gtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggatt |
96 |
Q |
| |
|
||||||||| ||||||| |||||||||||||||||| || ||||| |||| | || |||||||||||||| |
|
|
| T |
31494397 |
gtattcaatcaagattttttacaacttaaaaattgtctcttggtattaaaaaatgtattgattttaatggatt |
31494469 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 134; Significance: 1e-69; HSPs: 19)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 24 - 201
Target Start/End: Original strand, 26336226 - 26336403
Alignment:
| Q |
24 |
gtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtgagact |
123 |
Q |
| |
|
|||||||||| ||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |
|
|
| T |
26336226 |
gtattcaattgagattttacacaacttaaaaattgtttattggtattcaaaattctaaggattttaatggattattgtgagtaatggattttgtgagact |
26336325 |
T |
 |
| Q |
124 |
ttttaatgtaaaatgcatctactaacaatctcacacctagccttgagacttttttgtctcccgcacatagtcttgaga |
201 |
Q |
| |
|
||||| ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |
|
|
| T |
26336326 |
ttttagtgtaaaatgtatctaccaacaatctcacacctagccttgagacttttttgtctcccacacatagccttgaga |
26336403 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 24 - 201
Target Start/End: Original strand, 45332824 - 45333001
Alignment:
| Q |
24 |
gtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtgagact |
123 |
Q |
| |
|
|||||||||| ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||| |
|
|
| T |
45332824 |
gtattcaattgagattttacacaacttaaaaattgtctattggtattcaaaattctaaggattttaatggattgttgtgagtaatggattttatgaaact |
45332923 |
T |
 |
| Q |
124 |
ttttaatgtaaaatgcatctactaacaatctcacacctagccttgagacttttttgtctcccgcacatagtcttgaga |
201 |
Q |
| |
|
||||| ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |
|
|
| T |
45332924 |
ttttagtgtaaaatgtatctaccaacaatctcacacctagccttgagacttttttgtctcccacacatagccttgaga |
45333001 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 24 - 201
Target Start/End: Original strand, 45340514 - 45340691
Alignment:
| Q |
24 |
gtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtgagact |
123 |
Q |
| |
|
|||||||||| ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||| |
|
|
| T |
45340514 |
gtattcaattgagattttacacaacttaaaaattgtctattggtattcaaaattctaaggattttaatggattgttgtgagtaatggattttatgaaact |
45340613 |
T |
 |
| Q |
124 |
ttttaatgtaaaatgcatctactaacaatctcacacctagccttgagacttttttgtctcccgcacatagtcttgaga |
201 |
Q |
| |
|
||||| ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |
|
|
| T |
45340614 |
ttttagtgtaaaatgtatctaccaacaatctcacacctagccttgagacttttttgtctcccacacatagccttgaga |
45340691 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 24 - 201
Target Start/End: Original strand, 42720877 - 42721055
Alignment:
| Q |
24 |
gtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtgagact |
123 |
Q |
| |
|
|||||||||| ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
42720877 |
gtattcaattgagattttacacaacttaaaaattgtctattggtattcaaaattctaaggattttaatgggttgttgtgagtaatggattttgtgagact |
42720976 |
T |
 |
| Q |
124 |
ttttaatgtaaaatgcatctactaacaatctcacacctagccttgagac-ttttttgtctcccgcacatagtcttgaga |
201 |
Q |
| |
|
||||| ||||||||| |||||| |||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||| |
|
|
| T |
42720977 |
ttttagtgtaaaatgtatctaccaacaatctcacacctagccttgagactttttttgtctcccacacatagccttgaga |
42721055 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 47685294 - 47685477
Alignment:
| Q |
16 |
attcagtagtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggatttt |
115 |
Q |
| |
|
||||||| |||||||||| ||||||||| |||||||||||||||||||| |||||||||||| ||||||||||||||||||||| |||||||| |||||| |
|
|
| T |
47685294 |
attcagtggtattcaattgagattttgctcaacttaaaaattgtctattggtattcaaaattgtaaggattttaatggattgttgtgagtaatagatttt |
47685393 |
T |
 |
| Q |
116 |
gtgagactttttaatgtaaaatgcatctactaacaatctcacacctagccttgagacttttttgtctcccgcacatagtcttga |
199 |
Q |
| |
|
| ||||||||||| ||||||||| | ||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||| |
|
|
| T |
47685394 |
gcgagactttttagtgtaaaatgtacctactaacaatctcacacctaaacttgagacttttttgtctcccacacatagccttga |
47685477 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 19 - 193
Target Start/End: Original strand, 54509867 - 54510039
Alignment:
| Q |
19 |
cagtagtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtg |
118 |
Q |
| |
|
|||| |||||||||| |||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
54509867 |
cagtggtattcaattgagattttgcacaacttaaaaattgtctattggtattcaaaattgtaaggattttaatggattgttatg---aatggattttgtg |
54509963 |
T |
 |
| Q |
119 |
agactttttaatgtaaaatgcatctactaacaatctcacacctagccttgagac-ttttttgtctcccgcacatag |
193 |
Q |
| |
|
|||||||||| ||||||||| | ||||||||||||||||||||| ||||||| | ||||||||||||| ||||||| |
|
|
| T |
54509964 |
agactttttagtgtaaaatgtacctactaacaatctcacacctaaccttgaggctttttttgtctcccacacatag |
54510039 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 19 - 185
Target Start/End: Original strand, 8880597 - 8880763
Alignment:
| Q |
19 |
cagtagtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtg |
118 |
Q |
| |
|
|||| |||||||||| |||||||||| ||||||||||||||||| |||||||||||| |||| |||||||||||||||||| ||||||||| |||||||| |
|
|
| T |
8880597 |
cagtggtattcaattgagattttgcataacttaaaaattgtctactagtattcaaaactctacggattttaatggattgttgtgagtaatgaattttgtg |
8880696 |
T |
 |
| Q |
119 |
agactttttaatgtaaaatgcatctactaacaatctcacacctagccttgagacttttttgtctccc |
185 |
Q |
| |
|
||| | |||| ||||||||| | ||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
8880697 |
agattgtttagtgtaaaatgtacctactaacaatctcacacctagccttgagacttttctgtctccc |
8880763 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 16 - 201
Target Start/End: Complemental strand, 8583939 - 8583754
Alignment:
| Q |
16 |
attcagtagtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggatttt |
115 |
Q |
| |
|
||||||| |||||||||| |||||||||| ||||||||||||||||| | |||||||||| |||| |||||||||||||||||| ||||||||| ||||| |
|
|
| T |
8583939 |
attcagtggtattcaattaagattttgcataacttaaaaattgtctactggtattcaaaactctacggattttaatggattgttgtgagtaatgaatttt |
8583840 |
T |
 |
| Q |
116 |
gtgagactttttaatgtaaaatgcatctactaacaatctcacacctagccttgagacttttttgtctcccgcacatagtcttgaga |
201 |
Q |
| |
|
|||||| | |||| ||||||||| | ||||||||||||||||||||||||||||||||||| | ||||| ||||||| ||||||| |
|
|
| T |
8583839 |
gtgagattgtttagtgtaaaatgtacctactaacaatctcacacctagccttgagacttttctatctccaacacatagccttgaga |
8583754 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 24 - 185
Target Start/End: Complemental strand, 33450105 - 33449944
Alignment:
| Q |
24 |
gtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtgagact |
123 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| || |||||||||||||||||||||| |
|
|
| T |
33450105 |
gtattcaattgagattttgcacaacttaaaaattgtctattggtattcaaaattctacggattttaatggattattgtgagtaatggattttgtgagaca |
33450006 |
T |
 |
| Q |
124 |
ttttaatgtaaaatgcatctactaacaatctcacacctagccttgagacttttttgtctccc |
185 |
Q |
| |
|
||||| ||||||||| |||||||||||||||||||| |||||| | |||||| |||||||| |
|
|
| T |
33450005 |
ttttagtgtaaaatgtatctactaacaatctcacacatagcctcaacacttttctgtctccc |
33449944 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 16 - 201
Target Start/End: Original strand, 44930025 - 44930210
Alignment:
| Q |
16 |
attcagtagtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggatttt |
115 |
Q |
| |
|
||||||| |||||||||| |||||||||| ||||||||||||||||| |||||||||| |||| |||||||||||||||||| ||||||| ||||||| |
|
|
| T |
44930025 |
attcagtggtattcaattgagattttgcataacttaaaaattgtctacgggtattcaaaactctacggattttaatggattgttgtgagtaaaggatttt |
44930124 |
T |
 |
| Q |
116 |
gtgagactttttaatgtaaaatgcatctactaacaatctcacacctagccttgagacttttttgtctcccgcacatagtcttgaga |
201 |
Q |
| |
|
|||||| | |||| ||||||||| | |||||||||||||||||||||||||||||| |||| | |||||| ||||||| ||||||| |
|
|
| T |
44930125 |
gtgagattgtttagtgtaaaatgtacctactaacaatctcacacctagccttgagatttttctatctcccacacatagccttgaga |
44930210 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 42218377 - 42218195
Alignment:
| Q |
19 |
cagtagtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtg |
118 |
Q |
| |
|
|||| |||||||||| |||||||||| ||||||||||||||||| | ||||||||| |||| |||||||||||||||||| ||||||||| |||||||| |
|
|
| T |
42218377 |
cagtggtattcaattgagattttgcataacttaaaaattgtctactgatattcaaaactctacggattttaatggattgttgtgagtaatgaattttgtg |
42218278 |
T |
 |
| Q |
119 |
agactttttaatgtaaaatgcatctactaacaatctcacacctagccttgagacttttttgtctcccgcacatagtcttgaga |
201 |
Q |
| |
|
||| | |||| ||||||||| | ||||||||||||||||||||||||||||||||||| | ||||| ||||||| ||||||| |
|
|
| T |
42218277 |
agattgtttagtgtaaaatgtacctactaacaatctcacacctagccttgagacttttctatctcctacacatagccttgaga |
42218195 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 24 - 201
Target Start/End: Original strand, 52109564 - 52109741
Alignment:
| Q |
24 |
gtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtgagact |
123 |
Q |
| |
|
|||||||||| |||||||||| |||||||||||||| || ||||||||| |||| |||||||||||||||||| ||||||||||||||||||||| | |
|
|
| T |
52109564 |
gtattcaattgagattttgcataacttaaaaattgtataccgatattcaaaactctacggattttaatggattgttgtgagtaatggattttgtgagatt |
52109663 |
T |
 |
| Q |
124 |
ttttaatgtaaaatgcatctactaacaatctcacacctagccttgagacttttttgtctcccgcacatagtcttgaga |
201 |
Q |
| |
|
|||||||||||||| | |||||||||||| |||||||||||||||||||||| |||||||| |||||| ||||||| |
|
|
| T |
52109664 |
gtttaatgtaaaatgtacctactaacaatcccacacctagccttgagacttttctgtctcccacacataaccttgaga |
52109741 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 16 - 176
Target Start/End: Complemental strand, 3435891 - 3435731
Alignment:
| Q |
16 |
attcagtagtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggatttt |
115 |
Q |
| |
|
||||||| |||||||||| |||||||||| |||||||||||||| | | |||||||||| |||| |||||||||||||||||| |||||||| |||||| |
|
|
| T |
3435891 |
attcagtggtattcaattgagattttgcataacttaaaaattgtgtgctggtattcaaaactctacggattttaatggattgttgtgagtaatagatttt |
3435792 |
T |
 |
| Q |
116 |
gtgagactttttaatgtaaaatgcatctactaacaatctcacacctagccttgagactttt |
176 |
Q |
| |
|
|||||| | |||| ||||||||| | ||||||||||||||||||||||||||||||||||| |
|
|
| T |
3435791 |
gtgagattgtttagtgtaaaatgtacctactaacaatctcacacctagccttgagactttt |
3435731 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 20 - 201
Target Start/End: Original strand, 25935941 - 25936123
Alignment:
| Q |
20 |
agtagtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtga |
119 |
Q |
| |
|
|||||||||||||| |||||||||| ||||||||||||||||| |||||||||||| || | |||||||||||||||| ||||||||||||||||||| |
|
|
| T |
25935941 |
agtagtattcaattgagattttgcataacttaaaaattgtctactagtattcaaaactcatcgaattttaatggattgttgtgagtaatggattttgtga |
25936040 |
T |
 |
| Q |
120 |
gactttttaatgtaaaatgcatctactaacaatctcacacctagccttgagacttt--tttgtctcccgcacatagtcttgaga |
201 |
Q |
| |
|
|| | |||| ||||||||| | ||| ||||||||||||| |||||||||||||||| | |||||||| |||||| |||||||| |
|
|
| T |
25936041 |
gattgtttagtgtaaaatgaacctattaacaatctcaca-ctagccttgagacttttctgtgtctcccacacataatcttgaga |
25936123 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 24 - 201
Target Start/End: Original strand, 40143934 - 40144095
Alignment:
| Q |
24 |
gtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtgagact |
123 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||| |||||||||||| |||| |||||||||||||||| |||||||| |
|
|
| T |
40143934 |
gtattcaattgagattttgcacaacttaaaaattgtctattggtattcaaaattgtaagaattttaatggattgtt----------------gtgagact |
40144017 |
T |
 |
| Q |
124 |
ttttaatgtaaaatgcatctactaacaatctcacacctagccttgagacttttttgtctcccgcacatagtcttgaga |
201 |
Q |
| |
|
||||| ||||||||| | |||||||||||||||||| || |||||||||||||||||||||| ||||||| ||||||| |
|
|
| T |
40144018 |
ttttagtgtaaaatgtacctactaacaatctcacacttaaccttgagacttttttgtctcccacacatagccttgaga |
40144095 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 7820292 - 7820373
Alignment:
| Q |
112 |
ttttgtgagactttttaatgtaaaatgcatctactaacaatctcacacctagccttgagacttttttgtctcccgcacatag |
193 |
Q |
| |
|
|||| ||||| | |||| ||||||||||| ||||||||||||||||||||||||| ||||||||| |||||||| ||||||| |
|
|
| T |
7820292 |
ttttatgagattgtttagtgtaaaatgcacctactaacaatctcacacctagcctggagacttttctgtctcccacacatag |
7820373 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 7820242 - 7820288
Alignment:
| Q |
46 |
aacttaaaaattgtctattagtattcaaaattctaaggattttaatg |
92 |
Q |
| |
|
||||||||||||||||| |||||||||||| |||| ||||||||||| |
|
|
| T |
7820242 |
aacttaaaaattgtctactagtattcaaaactctacggattttaatg |
7820288 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 128
Target Start/End: Complemental strand, 28100507 - 28100404
Alignment:
| Q |
25 |
tattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtgagactt |
124 |
Q |
| |
|
||||||||| |||||| ||||||||| ||| ||||| ||||||||||||| | | |||||| ||||||| || | | ||||||||||| ||||||| |
|
|
| T |
28100507 |
tattcaattaagatttctcacaacttataaaatgtcttttagtattcaaaaattaatagattttgatggattcttttatggaatggattttgagagactt |
28100408 |
T |
 |
| Q |
125 |
ttta |
128 |
Q |
| |
|
|||| |
|
|
| T |
28100407 |
ttta |
28100404 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 24 - 128
Target Start/End: Original strand, 38230930 - 38231034
Alignment:
| Q |
24 |
gtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtgagact |
123 |
Q |
| |
|
|||||||||| |||||| || ||||| ||||||| ||| |||||||||| |||| |||||| ||||||| || | |||||||||||||||||| |
|
|
| T |
38230930 |
gtattcaattgagatttctcatgacttatgaattgtccattggtattcaaaagtctatagattttgatggattcttggatggaatggattttgtgagact |
38231029 |
T |
 |
| Q |
124 |
tttta |
128 |
Q |
| |
|
||||| |
|
|
| T |
38231030 |
tttta |
38231034 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 131; Significance: 9e-68; HSPs: 24)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 19 - 193
Target Start/End: Complemental strand, 37567303 - 37567129
Alignment:
| Q |
19 |
cagtagtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtg |
118 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| || ||||||||||| |||||| |||||||||||||||||| |
|
|
| T |
37567303 |
cagtagtattcaattgagattttgcacaacttaaaaattgtctattggtattcaaaattgtacggattttaatgaattgttgtgagtaatggattttgtg |
37567204 |
T |
 |
| Q |
119 |
agactttttaatgtaaaatgcatctactaacaatctcacacctagccttgagacttttttgtctcccgcacatag |
193 |
Q |
| |
|
|| ||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||||| |
|
|
| T |
37567203 |
aggctttttagtgtaaaatgtatctactaacaatctcacacctaaccttgagacttttttgtctcccacacatag |
37567129 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 24 - 201
Target Start/End: Complemental strand, 4302734 - 4302555
Alignment:
| Q |
24 |
gtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtgagact |
123 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| | |||||| |
|
|
| T |
4302734 |
gtattcaattgagattttgcacaacttaaaaattgtctattagtattcaaaattgtaaggattttaatggattgttgtgagtaatggatttagcgagact |
4302635 |
T |
 |
| Q |
124 |
ttttaatgtaaaatgcatctactaacaatctcacacctagccttgagac--ttttttgtctcccgcacatagtcttgaga |
201 |
Q |
| |
|
||||| ||||||||| | ||||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||| |
|
|
| T |
4302634 |
ttttagtgtaaaatgtacctactaacaatctcacacctagccttgagacatttttttgtctcccacacatagccttgaga |
4302555 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 19 - 192
Target Start/End: Complemental strand, 30382605 - 30382432
Alignment:
| Q |
19 |
cagtagtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtg |
118 |
Q |
| |
|
|||| |||||||||| |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| |||||||| |||||||| |
|
|
| T |
30382605 |
cagtggtattcaattgagattttgcacaacttaaaaattgtctattggtattcaaaattgtaaggattttaatggattgttgtgagtaatcaattttgtg |
30382506 |
T |
 |
| Q |
119 |
agactttttaatgtaaaatgcatctactaacaatctcacacctagccttgagacttttttgtctcccgcacata |
192 |
Q |
| |
|
|||||||||| ||||||||| | ||||||||||||||||| ||| |||||||||||||||||||||| |||||| |
|
|
| T |
30382505 |
agactttttagtgtaaaatgtacctactaacaatctcacatctaaccttgagacttttttgtctcccacacata |
30382432 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 43605295 - 43605113
Alignment:
| Q |
19 |
cagtagtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtg |
118 |
Q |
| |
|
|||| |||||||||| |||||| ||| |||||||||||||||| |||||||||||| |||| |||||||||||||||||| |||||||||||||||||| |
|
|
| T |
43605295 |
cagtggtattcaattgagatttcgcataacttaaaaattgtctgctagtattcaaaactctacggattttaatggattgttgtgagtaatggattttgtg |
43605196 |
T |
 |
| Q |
119 |
agactttttaatgtaaaatgcatctactaacaatctcacacctagccttgagacttttttgtctcccgcacatagtcttgaga |
201 |
Q |
| |
|
||| | |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |
|
|
| T |
43605195 |
agattgtttaatgtaaaatgtacttactaacaatctcacacctagccttgagacttttttgtctcccacacatagccttgaga |
43605113 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 19 - 185
Target Start/End: Complemental strand, 10802702 - 10802536
Alignment:
| Q |
19 |
cagtagtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtg |
118 |
Q |
| |
|
|||| |||||||||| |||||||||| ||||||||||||||||| |||||||||||| |||| |||||||||||||||||| |||||||||||||||||| |
|
|
| T |
10802702 |
cagtggtattcaattgagattttgcataacttaaaaattgtctactagtattcaaaactctacggattttaatggattgttgtgagtaatggattttgtg |
10802603 |
T |
 |
| Q |
119 |
agactttttaatgtaaaatgcatctactaacaatctcacacctagccttgagacttttttgtctccc |
185 |
Q |
| |
|
||| | |||| ||||||||| | ||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
10802602 |
agattgtttagtgtaaaatgtacctactaacaatctcacacctagccttgagacttttctgtctccc |
10802536 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 41386801 - 41386619
Alignment:
| Q |
19 |
cagtagtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtg |
118 |
Q |
| |
|
|||| |||||||||| |||||||||| ||||||||||||||||| |||||||||||| |||| |||||||||||||||||| ||||||||||||||| || |
|
|
| T |
41386801 |
cagtggtattcaattgagattttgcataacttaaaaattgtctactagtattcaaaactctacggattttaatggattgttgtgagtaatggattttatg |
41386702 |
T |
 |
| Q |
119 |
agactttttaatgtaaaatgcatctactaacaatctcacacctagccttgagacttttttgtctcccgcacatagtcttgaga |
201 |
Q |
| |
|
||| | |||| ||||||||| | ||||||||||||||||||||||||||||||||||| | |||||| ||||||| ||||||| |
|
|
| T |
41386701 |
agattgtttagtgtaaaatgtacctactaacaatctcacacctagccttgagacttttctatctcccacacatagccttgaga |
41386619 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 16 - 201
Target Start/End: Original strand, 4655197 - 4655382
Alignment:
| Q |
16 |
attcagtagtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggatttt |
115 |
Q |
| |
|
||||||| |||||||||| |||||||||| ||||||||||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
4655197 |
attcagtggtattcaattgagattttgcataacttaaaaattgtctaccggtattcaaaactctacggattttaatggattgttatgagtaatggatttt |
4655296 |
T |
 |
| Q |
116 |
gtgagactttttaatgtaaaatgcatctactaacaatctcacacctagccttgagacttttttgtctcccgcacatagtcttgaga |
201 |
Q |
| |
|
|||||| | |||| ||||||||| | |||||||||||||||||||||||||||||||||| | |||| | ||||||| ||||||| |
|
|
| T |
4655297 |
gtgagattgtttagtgtaaaatgtacatactaacaatctcacacctagccttgagacttttctatctctcacacatagccttgaga |
4655382 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 24 - 185
Target Start/End: Original strand, 8502790 - 8502951
Alignment:
| Q |
24 |
gtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtgagact |
123 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||| ||||||||||||||| ||||||| |
|
|
| T |
8502790 |
gtattcaattaagattttgcacaacttaaaaattgtctattggtatttaaaattctacggattttaatggattgttgtgagtaatggattttatgagact |
8502889 |
T |
 |
| Q |
124 |
ttttaatgtaaaatgcatctactaacaatctcacacctagccttgagacttttttgtctccc |
185 |
Q |
| |
|
||||| ||||||||| | |||||||||||||||||| ||||||| |||||||| ||||||| |
|
|
| T |
8502890 |
ttttagtgtaaaatgtacctactaacaatctcacacatagccttaagacttttccgtctccc |
8502951 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 7148193 - 7148375
Alignment:
| Q |
19 |
cagtagtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtg |
118 |
Q |
| |
|
|||| |||||||||| |||||||||| |||||| |||||||||| | | |||||||| |||| |||||||||||||||||| |||||||||||||||||| |
|
|
| T |
7148193 |
cagtggtattcaattgagattttgcataacttagaaattgtctactggcattcaaaactctacggattttaatggattgttgtgagtaatggattttgtg |
7148292 |
T |
 |
| Q |
119 |
agactttttaatgtaaaatgcatctactaacaatctcacacctagccttgagacttttttgtctcccgcacatagtcttgaga |
201 |
Q |
| |
|
||| | |||| ||||||||| | ||||||||||||||||||||||||||||||||||| | |||||| ||||||| ||||||| |
|
|
| T |
7148293 |
agattgtttagtgtaaaatgtacctactaacaatctcacacctagccttgagacttttctatctcccacacatagccttgaga |
7148375 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 29260207 - 29260025
Alignment:
| Q |
19 |
cagtagtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtg |
118 |
Q |
| |
|
|||| |||||||||| |||||||||| ||||||||||||||||| | |||||||||| |||| |||||||||||||||||| |||||||||||||||||| |
|
|
| T |
29260207 |
cagtggtattcaattgagattttgcataacttaaaaattgtctactggtattcaaaactctacggattttaatggattgttgtgagtaatggattttgtg |
29260108 |
T |
 |
| Q |
119 |
agactttttaatgtaaaatgcatctactaacaatctcacacctagccttgagacttttttgtctcccgcacatagtcttgaga |
201 |
Q |
| |
|
||| | |||| ||||||||| | |||||||||||||||||||| ||||||||||||| | |||||| ||||||| ||||||| |
|
|
| T |
29260107 |
agattgtttagtgtaaaatgtacgtactaacaatctcacacctaaccttgagacttttctatctcccacacatagccttgaga |
29260025 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 19 - 185
Target Start/End: Complemental strand, 40265212 - 40265046
Alignment:
| Q |
19 |
cagtagtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtg |
118 |
Q |
| |
|
|||| |||||||||| |||||||||| ||||||||||||||||| | |||||||||| |||| |||||||||||||||||| |||||||||||||||||| |
|
|
| T |
40265212 |
cagtggtattcaattgagattttgcataacttaaaaattgtctaatggtattcaaaactctatggattttaatggattgttgtgagtaatggattttgtg |
40265113 |
T |
 |
| Q |
119 |
agactttttaatgtaaaatgcatctactaacaatctcacacctagccttgagacttttttgtctccc |
185 |
Q |
| |
|
||| | |||| ||||||||| | ||||||||||||||||||||||||||||||||||| | |||||| |
|
|
| T |
40265112 |
agattgtttagtgtaaaatgtacctactaacaatctcacacctagccttgagacttttctatctccc |
40265046 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 24 - 201
Target Start/End: Original strand, 42275130 - 42275308
Alignment:
| Q |
24 |
gtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtgagact |
123 |
Q |
| |
|
|||||||||| |||||||||| ||||||||||||||||| |||||||||||| |||| ||||||| |||||||||| ||||||||||||||||||||| | |
|
|
| T |
42275130 |
gtattcaattgagattttgcataacttaaaaattgtctactagtattcaaaactctacggatttttatggattgttgtgagtaatggattttgtgagatt |
42275229 |
T |
 |
| Q |
124 |
ttttaatgtaaaatgcatctactaa-caatctcacacctagccttgagacttttttgtctcccgcacatagtcttgaga |
201 |
Q |
| |
|
|||| ||||||||| | ||||||| |||||||||||||||||||||||||||| |||||||| |||||| ||||||| |
|
|
| T |
42275230 |
gtttagtgtaaaatgtacctactaaccaatctcacacctagccttgagacttttctgtctcccacacataaccttgaga |
42275308 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 2112944 - 2113126
Alignment:
| Q |
19 |
cagtagtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtg |
118 |
Q |
| |
|
|||| |||||||||| |||||| ||| ||||||||||||||||| | |||||||||| |||| |||||||||||||||||| |||||||||||||||||| |
|
|
| T |
2112944 |
cagtggtattcaattgagatttcgcataacttaaaaattgtctactggtattcaaaactctacggattttaatggattgttgtgagtaatggattttgtg |
2113043 |
T |
 |
| Q |
119 |
agactttttaatgtaaaatgcatctactaacaatctcacacctagccttgagacttttttgtctcccgcacatagtcttgaga |
201 |
Q |
| |
|
||| | |||| ||||||||| | ||||| ||||||||||||||||| ||||||||||| |||||||| || |||| ||||||| |
|
|
| T |
2113044 |
agattgtttagtgtaaaatgtacctactgacaatctcacacctagcattgagacttttctgtctcccacatatagccttgaga |
2113126 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 16 - 201
Target Start/End: Original strand, 28619994 - 28620179
Alignment:
| Q |
16 |
attcagtagtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggatttt |
115 |
Q |
| |
|
||||||| |||||||||| |||||||||| ||||||||||||||||| | |||||||||| |||| |||||||||||||||||| ||||||||| | ||| |
|
|
| T |
28619994 |
attcagtggtattcaattgagattttgcataacttaaaaattgtctactggtattcaaaactctacggattttaatggattgttgtgagtaatgaacttt |
28620093 |
T |
 |
| Q |
116 |
gtgagactttttaatgtaaaatgcatctactaacaatctcacacctagccttgagacttttttgtctcccgcacatagtcttgaga |
201 |
Q |
| |
|
|||||| | ||||||||| |||| | ||||||||||||||||||||| |||||||||||| |||||||| |||||| ||||||| |
|
|
| T |
28620094 |
gtgagattgtttaatgtacaatgtacctactaacaatctcacacctaatcttgagacttttctgtctcccacacataaccttgaga |
28620179 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 19 - 171
Target Start/End: Original strand, 9457696 - 9457848
Alignment:
| Q |
19 |
cagtagtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtg |
118 |
Q |
| |
|
|||| |||||||||| |||||||||| |||||||||||||||||| |||||||||| |||| |||||||||||||||||| ||||||||||||||| || |
|
|
| T |
9457696 |
cagtggtattcaattgagattttgcataacttaaaaattgtctatcggtattcaaaactctacggattttaatggattgttgtgagtaatggattttatg |
9457795 |
T |
 |
| Q |
119 |
agactttttaatgtaaaatgcatctactaacaatctcacacctagccttgaga |
171 |
Q |
| |
|
||| | |||| ||||||||| | ||||||||||||||||||||| |||||||| |
|
|
| T |
9457796 |
agattgtttagtgtaaaatgtacctactaacaatctcacacctaaccttgaga |
9457848 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 41965729 - 41965549
Alignment:
| Q |
19 |
cagtagtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtg |
118 |
Q |
| |
|
|||| |||||||||| |||||||||| |||||||| ||||||| | |||||||||| |||| |||||||||||||||| |||||||||||||||||| |
|
|
| T |
41965729 |
cagtggtattcaattgagattttgcataacttaaa--ttgtctactggtattcaaaactctacatattttaatggattgttgtgagtaatggattttgtg |
41965632 |
T |
 |
| Q |
119 |
agactttttaatgtaaaatgcatctactaacaatctcacacctagccttgagacttttttgtctcccgcacatagtcttgaga |
201 |
Q |
| |
|
||| | |||| ||||||||| | |||||||||||||| |||||||||||||||||||| | |||||| ||||||| ||||||| |
|
|
| T |
41965631 |
agattatttagtgtaaaatgtacctactaacaatctcgcacctagccttgagacttttctatctcccacacatagccttgaga |
41965549 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 24 - 185
Target Start/End: Original strand, 35142200 - 35142361
Alignment:
| Q |
24 |
gtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtgagact |
123 |
Q |
| |
|
|||||||||| |||||||| ||||||||||||||||||||| ||||||||||| || |||||||| | ||||||| ||||||||||||||| ||||||| |
|
|
| T |
35142200 |
gtattcaattaagattttgtacaacttaaaaattgtctattggtattcaaaatattacggattttattagattgttgtgagtaatggattttatgagact |
35142299 |
T |
 |
| Q |
124 |
ttttaatgtaaaatgcatctactaacaatctcacacctagccttgagacttttttgtctccc |
185 |
Q |
| |
|
||||| |||||||| | ||||||||| ||||||| ||||||| |||||||| ||||||| |
|
|
| T |
35142300 |
ttttagtgtaaaatctacctactaacactctcacaactagcctcaagacttttcggtctccc |
35142361 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 19 - 155
Target Start/End: Original strand, 9209189 - 9209325
Alignment:
| Q |
19 |
cagtagtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtg |
118 |
Q |
| |
|
|||| |||||||||| | |||||| ||||||||||||||||||||| |||||||||| ||||||||||||||| | ||||| || ||||| |||||||| |
|
|
| T |
9209189 |
cagtggtattcaattgaaattttggacaacttaaaaattgtctattggtattcaaaactctaaggattttaatagtttgttgtgggtaatttattttgtg |
9209288 |
T |
 |
| Q |
119 |
agactttttaatgtaaaatgcatctactaacaatctc |
155 |
Q |
| |
|
|||||||||| ||||||||| | |||||||||||||| |
|
|
| T |
9209289 |
agactttttagtgtaaaatgtacctactaacaatctc |
9209325 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 95 - 185
Target Start/End: Complemental strand, 40013350 - 40013264
Alignment:
| Q |
95 |
ttgttatgagtaatggattttgtgagactttttaatgtaaaatgcatctactaacaatctcacacctagccttgagacttttttgtctccc |
185 |
Q |
| |
|
||||||||||||||||||||| |||||||| | |||||| | |||||||||||||||||| | |||||||||||||| |||||||| |
|
|
| T |
40013350 |
ttgttatgagtaatggatttta----actttttagtataaaatatacctactaacaatctcacacttggccttgagacttttctgtctccc |
40013264 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 41965404 - 41965347
Alignment:
| Q |
144 |
actaacaatctcacacctagccttgagacttttttgtctcccgcacatagtcttgaga |
201 |
Q |
| |
|
|||||||||||| |||||||||||||||||||| | |||||| ||||||| ||||||| |
|
|
| T |
41965404 |
actaacaatctcgcacctagccttgagacttttctatctcccacacatagccttgaga |
41965347 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 40013406 - 40013358
Alignment:
| Q |
16 |
attcagtagtattcaattcagattttgcacaacttaaaaattgtctatt |
64 |
Q |
| |
|
||||||| |||||||||| ||||||||||||||||||||||||| |||| |
|
|
| T |
40013406 |
attcagtggtattcaatttagattttgcacaacttaaaaattgtttatt |
40013358 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 1605944 - 1605902
Alignment:
| Q |
19 |
cagtagtattcaattcagattttgcacaacttaaaaattgtct |
61 |
Q |
| |
|
||||||||||||||| |||||||||| |||||||||||||||| |
|
|
| T |
1605944 |
cagtagtattcaattgagattttgcataacttaaaaattgtct |
1605902 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 60 - 128
Target Start/End: Complemental strand, 39039013 - 39038945
Alignment:
| Q |
60 |
ctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtgagacttttta |
128 |
Q |
| |
|
||||| |||||||||| |||| ||||||||||||| || || ||||| |||||||||||||||||| |
|
|
| T |
39039013 |
ctattggtattcaaaaatctataaattttaatggattcttttgtataatgaattttgtgagacttttta |
39038945 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 24 - 128
Target Start/End: Original strand, 43489064 - 43489168
Alignment:
| Q |
24 |
gtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtgagact |
123 |
Q |
| |
|
|||||||||| |||||| | |||||| ||| ||||| | ||||| |||||| | ||||||||||||||| | || |||||||||| ||||||||| |
|
|
| T |
43489064 |
gtattcaattaagatttctaagaacttataaaatgtctcgtggtattgaaaattagacggattttaatggattcatttgtgtaatggattgtgtgagact |
43489163 |
T |
 |
| Q |
124 |
tttta |
128 |
Q |
| |
|
||||| |
|
|
| T |
43489164 |
tttta |
43489168 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 126; Significance: 9e-65; HSPs: 22)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 16 - 193
Target Start/End: Original strand, 27593302 - 27593479
Alignment:
| Q |
16 |
attcagtagtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggatttt |
115 |
Q |
| |
|
||||||| |||||||||| || ||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
27593302 |
attcagtggtattcaattgaggttttgcacatcttaaaaattgtctattggtattcaaaattgtaaggattttaatggattgttgtgagtaatggatttt |
27593401 |
T |
 |
| Q |
116 |
gtgagactttttaatgtaaaatgcatctactaacaatctcacacctagccttgagacttttttgtctcccgcacatag |
193 |
Q |
| |
|
||||||||||||| ||||||||| | ||||||||||||||||||||| ||||||||||||||||||||| ||||||| |
|
|
| T |
27593402 |
gtgagactttttagtgtaaaatgtacctactaacaatctcacacctaaccttgagacttttttgtctccaacacatag |
27593479 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 36054938 - 36054756
Alignment:
| Q |
19 |
cagtagtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtg |
118 |
Q |
| |
|
|||| |||||||||| |||||||||| |||||||||||||||| |||| ||||||| |||| |||||||||||||||||| |||||||||||||||||| |
|
|
| T |
36054938 |
cagtggtattcaattgagattttgcataacttaaaaattgtctgctagttttcaaaactctacggattttaatggattgttgtgagtaatggattttgtg |
36054839 |
T |
 |
| Q |
119 |
agactttttaatgtaaaatgcatctactaacaatctcacacctagccttgagacttttttgtctcccgcacatagtcttgaga |
201 |
Q |
| |
|
||| | |||| ||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||| ||||||| ||||||| |
|
|
| T |
36054838 |
agattgtttagtgtaaaatgtatctattaacaatctcacacctaaccttgagacttttttgtctcccacacatagccttgaga |
36054756 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 19 - 282
Target Start/End: Original strand, 36786124 - 36786385
Alignment:
| Q |
19 |
cagtagtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtg |
118 |
Q |
| |
|
|||| |||||||||| |||||||||| ||||| ||| ||||||||| |||||||||||| |||||||||||||| |||||| ||||||||||||||| || |
|
|
| T |
36786124 |
cagtggtattcaattgagattttgcaaaactttaaacttgtctattggtattcaaaattgtaaggattttaatgaattgttgtgagtaatggattttatg |
36786223 |
T |
 |
| Q |
119 |
agactttttaatgtaaaatgcatctactaacaatctcacacctagccttgagacttttttgtctcccgcacatagtcttgagannnnnnnnaattgcttc |
218 |
Q |
| |
|
|||||||||| ||||||||| | |||||||||||| ||||||| ||||||||||||||||||||| | ||||||| ||||||| | ||||||| |
|
|
| T |
36786224 |
agactttttagtgtaaaatgtacctactaacaatcacacacct-gccttgagacttttttgtctctcacacatagccttgagattttttttagttgcttc |
36786322 |
T |
 |
| Q |
219 |
tcgttattttcnnnnnnnacagtagttgcttctcgagtctcgacgttgctgttcacattccagt |
282 |
Q |
| |
|
||||||||||| || | |||||||||||||||||||||||| ||||||| ||||||| |
|
|
| T |
36786323 |
tcgttattttc-ttttttacggaagttgcttctcgagtctcgacgttattgttcacgttccagt |
36786385 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 19 - 177
Target Start/End: Complemental strand, 39338228 - 39338072
Alignment:
| Q |
19 |
cagtagtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtg |
118 |
Q |
| |
|
|||| |||||||||| |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| |||||||||||||| || |
|
|
| T |
39338228 |
cagtggtattcaattgagattttgcacaacttaaaaattgtctattggtattcaaaattgtaaggattttaatggattgttgtgagtaatggattt--tg |
39338131 |
T |
 |
| Q |
119 |
agactttttaatgtaaaatgcatctactaacaatctcacacctagccttgagacttttt |
177 |
Q |
| |
|
|||||||||| ||||||||| | ||||||||||||||||||||| |||||||||||||| |
|
|
| T |
39338130 |
agactttttagtgtaaaatgtacctactaacaatctcacacctaaccttgagacttttt |
39338072 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 24150763 - 24150581
Alignment:
| Q |
19 |
cagtagtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtg |
118 |
Q |
| |
|
|||| |||||||||| |||||||||| ||||||||||||||| | | |||||||||| |||| |||||||||||||||||| |||||||||||||||||| |
|
|
| T |
24150763 |
cagtggtattcaattgagattttgcataacttaaaaattgtccactggtattcaaaactctacggattttaatggattgttgtgagtaatggattttgtg |
24150664 |
T |
 |
| Q |
119 |
agactttttaatgtaaaatgcatctactaacaatctcacacctagccttgagacttttttgtctcccgcacatagtcttgaga |
201 |
Q |
| |
|
||| | |||| ||||||||| | ||||||||||||||||||||||||||||||||||| | |||||| ||||||| ||||||| |
|
|
| T |
24150663 |
agattgtttagtgtaaaatgtacctactaacaatctcacacctagccttgagacttttctatctcccacacatagccttgaga |
24150581 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 35731085 - 35731267
Alignment:
| Q |
19 |
cagtagtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtg |
118 |
Q |
| |
|
|||| |||||||||| |||||||||| ||||||||||||||||| | |||||||||| |||| |||||||||||||||||| |||||||||||||||||| |
|
|
| T |
35731085 |
cagtggtattcaattgagattttgcataacttaaaaattgtctactggtattcaaaactctacggattttaatggattgttgtgagtaatggattttgtg |
35731184 |
T |
 |
| Q |
119 |
agactttttaatgtaaaatgcatctactaacaatctcacacctagccttgagacttttttgtctcccgcacatagtcttgaga |
201 |
Q |
| |
|
||| | |||| ||||||||||| || |||||||||||||||||||| ||||||||||| | |||||| ||||||| ||||||| |
|
|
| T |
35731185 |
agattgtttagtgtaaaatgcacctgctaacaatctcacacctagcattgagacttttctatctcccacacatagccttgaga |
35731267 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 37 - 201
Target Start/End: Complemental strand, 26005768 - 26005604
Alignment:
| Q |
37 |
attttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtgagactttttaatgtaaaa |
136 |
Q |
| |
|
|||||||| ||||||||||||||||||| |||||||||| |||| |||||||||||||||||| ||||||||||||||||||||| | |||| ||||||| |
|
|
| T |
26005768 |
attttgcataacttaaaaattgtctattggtattcaaaactctacggattttaatggattgttgtgagtaatggattttgtgagattgtttagtgtaaaa |
26005669 |
T |
 |
| Q |
137 |
tgcatctactaacaatctcacacctagccttgagacttttttgtctcccgcacatagtcttgaga |
201 |
Q |
| |
|
|| | ||||||||||||||||||||||||||||||||||| | |||||| ||||||| ||||||| |
|
|
| T |
26005668 |
tgtacctactaacaatctcacacctagccttgagacttttctatctcccacacatagccttgaga |
26005604 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 24 - 201
Target Start/End: Complemental strand, 38629726 - 38629549
Alignment:
| Q |
24 |
gtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtgagact |
123 |
Q |
| |
|
|||||||||| |||||||||| ||||||||||||||||| | |||||||||| | || |||||||||||||||||| ||||||||||||||||||||| | |
|
|
| T |
38629726 |
gtattcaattgagattttgcataacttaaaaattgtctactggtattcaaaactatacggattttaatggattgttgtgagtaatggattttgtgagatt |
38629627 |
T |
 |
| Q |
124 |
ttttaatgtaaaatgcatctactaacaatctcacacctagccttgagacttttttgtctcccgcacatagtcttgaga |
201 |
Q |
| |
|
|||| ||||||||| | |||||||||||||||||||||||||||||| |||| | |||||| ||||||| ||||||| |
|
|
| T |
38629626 |
gtttagtgtaaaatgtacctactaacaatctcacacctagccttgagatttttctatctcccacacatagccttgaga |
38629549 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 19 - 192
Target Start/End: Complemental strand, 46252134 - 46251961
Alignment:
| Q |
19 |
cagtagtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtg |
118 |
Q |
| |
|
|||| |||||||||| |||||||||| |||||||||||||||| | |||||||||| | || |||||||||||||||||| |||||||||||||||||| |
|
|
| T |
46252134 |
cagtggtattcaattgagattttgcataacttaaaaattgtctgctggtattcaaaactttacggattttaatggattgttgtgagtaatggattttgtg |
46252035 |
T |
 |
| Q |
119 |
agactttttaatgtaaaatgcatctactaacaatctcacacctagccttgagacttttttgtctcccgcacata |
192 |
Q |
| |
|
||| | |||| ||||||||| | ||||||||||||||||||||||||||||||||||| |||||||| |||||| |
|
|
| T |
46252034 |
agattgtttagtgtaaaatgtacctactaacaatctcacacctagccttgagacttttctgtctcccacacata |
46251961 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 13662701 - 13662883
Alignment:
| Q |
19 |
cagtagtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtg |
118 |
Q |
| |
|
|||| |||||||||| |||||| ||||||||||||||||||||| | |||||||||| ||| || ||||||||||||||| |||||||||||||||||| |
|
|
| T |
13662701 |
cagtggtattcaattgagatttcgcacaacttaaaaattgtctactcgtattcaaaacactacgggttttaatggattgttgtgagtaatggattttgtg |
13662800 |
T |
 |
| Q |
119 |
agactttttaatgtaaaatgcatctactaacaatctcacacctagccttgagacttttttgtctcccgcacatagtcttgaga |
201 |
Q |
| |
|
||| | |||| ||||||||| | ||||||||||||||||||||||||||||||||||| || ||||| |||||| ||||||| |
|
|
| T |
13662801 |
agattgtttagtgtaaaatgtacctactaacaatctcacacctagccttgagacttttctgcctcccacacataaccttgaga |
13662883 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 16 - 178
Target Start/End: Original strand, 30588989 - 30589151
Alignment:
| Q |
16 |
attcagtagtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggatttt |
115 |
Q |
| |
|
||||||| |||||||||| |||||| ||| ||||||||||||||||| | |||||||||| |||| |||||||||||||||||| ||||||||||||||| |
|
|
| T |
30588989 |
attcagtggtattcaattgagatttagcataacttaaaaattgtctactggtattcaaaactctacggattttaatggattgttgtgagtaatggatttt |
30589088 |
T |
 |
| Q |
116 |
gtgagactttttaatgtaaaatgcatctactaacaatctcacacctagccttgagactttttt |
178 |
Q |
| |
|
|||||| | |||| ||||||||| | ||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
30589089 |
gtgagattgtttagtgtaaaatgtacctactaacaatctcacacctaaccttgagactttttt |
30589151 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 19 - 191
Target Start/End: Complemental strand, 50900378 - 50900206
Alignment:
| Q |
19 |
cagtagtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtg |
118 |
Q |
| |
|
|||| |||||| ||| |||||||||| ||||||||||||||||| | |||||||||| |||| ||||||||||||||||| |||||||||||||||||| |
|
|
| T |
50900378 |
cagtggtattcgattgagattttgcataacttaaaaattgtctactggtattcaaaactctagagattttaatggattgttgtgagtaatggattttgtg |
50900279 |
T |
 |
| Q |
119 |
agactttttaatgtaaaatgcatctactaacaatctcacacctagccttgagacttttttgtctcccgcacat |
191 |
Q |
| |
|
||| | |||||||||||||| | |||||||||||||||||||||||||||||||||| | |||||| ||||| |
|
|
| T |
50900278 |
agattgtttaatgtaaaatgtacatactaacaatctcacacctagccttgagacttttctatctcccacacat |
50900206 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 19 - 198
Target Start/End: Complemental strand, 52024130 - 52023955
Alignment:
| Q |
19 |
cagtagtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtg |
118 |
Q |
| |
|
|||| |||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||||||| | |
|
|
| T |
52024130 |
cagtggtattcaattgagattttgcacaatttaaaaattgtctattagtaatcaaaattctacggattttaatggattgttgtgagtaatggattttaag |
52024031 |
T |
 |
| Q |
119 |
agactttttaatgtaaaatgcatctactaacaatctcacacctagccttgagacttttttgtctcccgcacatagtcttg |
198 |
Q |
| |
|
|||||||||| | ||||||| | ||| ||||||||||||||||| | ||||||||||||||||| ||||||| |||| |
|
|
| T |
52024030 |
agactttttagtataaaatgtacctagtaacaatctcacacctaac----agacttttttgtctcccacacatagacttg |
52023955 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 25 - 201
Target Start/End: Complemental strand, 26293492 - 26293316
Alignment:
| Q |
25 |
tattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtgagactt |
124 |
Q |
| |
|
|||| |||| |||||||||| |||||||||||||| || |||||||||||| |||| |||||||||||||||||| |||||||||||||||||| || | |
|
|
| T |
26293492 |
tatttaattgagattttgcataacttaaaaattgtttactagtattcaaaactctacggattttaatggattgttgtgagtaatggattttgtgtgattg |
26293393 |
T |
 |
| Q |
125 |
tttaatgtaaaatgcatctactaacaatctcacacctagccttgagacttttttgtctcccgcacatagtcttgaga |
201 |
Q |
| |
|
|||| ||||||||| | |||||||||| |||||||||| |||||||||||| |||||||| ||||||| ||||||| |
|
|
| T |
26293392 |
tttagtgtaaaatgtacctactaacaacctcacacctaatcttgagacttttctgtctcccacacatagccttgaga |
26293316 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 19 - 163
Target Start/End: Complemental strand, 26005914 - 26005770
Alignment:
| Q |
19 |
cagtagtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtg |
118 |
Q |
| |
|
|||| |||||||||| |||||||||| ||||||||||||||||| | |||||||||| |||| |||||||||||||||||| |||||||||||||||||| |
|
|
| T |
26005914 |
cagtggtattcaattgagattttgcataacttaaaaattgtctactggtattcaaaactctatggattttaatggattgttgtgagtaatggattttgtg |
26005815 |
T |
 |
| Q |
119 |
agactttttaatgtaaaatgcatctactaacaatctcacacctag |
163 |
Q |
| |
|
||| | |||| ||||||||| | |||||||||||||||||||||| |
|
|
| T |
26005814 |
agattgtttagtgtaaaatgtacctactaacaatctcacacctag |
26005770 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 25 - 166
Target Start/End: Original strand, 38682585 - 38682728
Alignment:
| Q |
25 |
tattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtgagactt |
124 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||| |||||||||||||||||| |||||||||||||||| |||| || |
|
|
| T |
38682585 |
tattcaattgagattttgcacaacttaaaaattgt-tattggtattcaaaattctacggattttaatggattgttgtgagtaatggattttgagagattt |
38682683 |
T |
 |
| Q |
125 |
tttaatgtaaaatgcat---ctactaacaatctcacacctagcct |
166 |
Q |
| |
|
|||| | ||||||| | ||||||||||||||||||||||||| |
|
|
| T |
38682684 |
tttagtataaaatgtagtacctactaacaatctcacacctagcct |
38682728 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 19552079 - 19551907
Alignment:
| Q |
19 |
cagtagtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtg |
118 |
Q |
| |
|
|||| ||||| |||| |||||||||| ||||||||||||||||| | |||||||||| |||| ||||||||| ||||||| ||||||||| |
|
|
| T |
19552079 |
cagtggtatttaattaagattttgcataacttaaaaattgtctagtggtattcaaaactctacagattttaattgattgtt----------gattttgtg |
19551990 |
T |
 |
| Q |
119 |
agactttttaatgtaaaatgcatctactaacaatctcacacctagccttgagacttttttgtctcccgcacatagtcttgaga |
201 |
Q |
| |
|
| | | |||| ||||||||| | ||| ||||||||||||||||||||||||||||||| | |||||| || |||| ||||||| |
|
|
| T |
19551989 |
aaattgtttagtgtaaaatgtacctaataacaatctcacacctagccttgagacttttctttctcccacatatagccttgaga |
19551907 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 105 - 192
Target Start/End: Original strand, 26556036 - 26556123
Alignment:
| Q |
105 |
taatggattttgtgagactttttaatgtaaaatgcatctactaacaatctcacacctagccttgagacttttttgtctcccgcacata |
192 |
Q |
| |
|
||||||||||||||||| | |||| ||||||||| | ||||||||||||||||||||||||||||||||||| | |||||| |||||| |
|
|
| T |
26556036 |
taatggattttgtgagattgtttagtgtaaaatgtacctactaacaatctcacacctagccttgagacttttctatctcccacacata |
26556123 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 19 - 96
Target Start/End: Original strand, 26555967 - 26556044
Alignment:
| Q |
19 |
cagtagtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggatt |
96 |
Q |
| |
|
|||| |||||||||| |||||||||| ||||||||||||||||| |||||||||| |||| ||||||||||||||| |
|
|
| T |
26555967 |
cagtggtattcaattgagattttgcataacttaaaaattgtctacgggtattcaaaactctacggattttaatggatt |
26556044 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 298 - 343
Target Start/End: Original strand, 36786402 - 36786447
Alignment:
| Q |
298 |
ttcctgcacacgttatatagttatcacatttcacttaaaaatatta |
343 |
Q |
| |
|
||||||||||||||| |||||||| ||||||||||| ||| ||||| |
|
|
| T |
36786402 |
ttcctgcacacgttacatagttattacatttcactttaaagtatta |
36786447 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 24 - 128
Target Start/End: Original strand, 85909 - 86013
Alignment:
| Q |
24 |
gtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtgagact |
123 |
Q |
| |
|
|||||||||| ||||||| | |||||| ||| ||||| | ||||| |||||| | |||||||| |||||| | || |||||||||| ||||||||| |
|
|
| T |
85909 |
gtattcaattaagatttttaagaacttataaaatgtctcgtggtattgaaaattagacggattttactggattcatttgtgtaatggattgtgtgagact |
86008 |
T |
 |
| Q |
124 |
tttta |
128 |
Q |
| |
|
||||| |
|
|
| T |
86009 |
tttta |
86013 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 24 - 128
Target Start/End: Original strand, 23697165 - 23697269
Alignment:
| Q |
24 |
gtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtgagact |
123 |
Q |
| |
|
|||||||||| |||||| | |||||| ||| ||||| | ||||| |||||| | ||||||||||||||| | || |||||||||| ||||||||| |
|
|
| T |
23697165 |
gtattcaattaagatttctaagaacttataaaatgtctcgtggtattgaaaattagacggattttaatggattcatttgtgtaatggattgtgtgagact |
23697264 |
T |
 |
| Q |
124 |
tttta |
128 |
Q |
| |
|
||||| |
|
|
| T |
23697265 |
tttta |
23697269 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 124; Significance: 1e-63; HSPs: 8)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 19 - 193
Target Start/End: Complemental strand, 6828723 - 6828548
Alignment:
| Q |
19 |
cagtagtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtg |
118 |
Q |
| |
|
|||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6828723 |
cagtggtattcaattgagattttgcacaacttaaaaattgtctattgatattcaaaattgtaaggattttaatggattgttatgagtaatggattttgtg |
6828624 |
T |
 |
| Q |
119 |
agactttttaatgtaaaatgcatctactaacaatctcacacctagccttgagactt-ttttgtctcccgcacatag |
193 |
Q |
| |
|
|||||||||| ||||||||| | ||||||||||||||||| ||| ||||||||||| ||||||||||| ||||||| |
|
|
| T |
6828623 |
agactttttagtgtaaaatgtacctactaacaatctcacatctaaccttgagactttttttgtctcccacacatag |
6828548 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 24 - 199
Target Start/End: Original strand, 40410748 - 40410923
Alignment:
| Q |
24 |
gtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtgagact |
123 |
Q |
| |
|
|||||||||| |||||||||| ||||||||||||||||| | |||||||||| |||| |||||||||||||||||| ||||||||||||||||||||| | |
|
|
| T |
40410748 |
gtattcaattgagattttgcataacttaaaaattgtctactcgtattcaaaactctacggattttaatggattgttgtgagtaatggattttgtgagatt |
40410847 |
T |
 |
| Q |
124 |
ttttaatgtaaaatgcatctactaacaatctcacacctagccttgagacttttttgtctcccgcacatagtcttga |
199 |
Q |
| |
|
|||| ||||||||| | |||||||||||||||||||||| |||||||||||| | |||||| ||||||| ||||| |
|
|
| T |
40410848 |
gtttagtgtaaaatgtacctactaacaatctcacacctagacttgagacttttctatctcccacacatagccttga |
40410923 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 24 - 185
Target Start/End: Original strand, 17518587 - 17518748
Alignment:
| Q |
24 |
gtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtgagact |
123 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||| |||| | ||||||||||||| ||||||||||||| |||| |||||||||||||||||||||| |
|
|
| T |
17518587 |
gtattcaattaagattttgcacaacttaaaaattgtttattgggattcaaaattctacggattttaatggaatgttgcgagtaatggattttgtgagact |
17518686 |
T |
 |
| Q |
124 |
ttttaatgtaaaatgcatctactaacaatctcacacctagccttgagacttttttgtctccc |
185 |
Q |
| |
|
||||| ||||||||| | ||||||||||||||||||| ||||| |||||||| |||||||| |
|
|
| T |
17518687 |
ttttagtgtaaaatgtacctactaacaatctcacacccagcctcaagacttttctgtctccc |
17518748 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 24 - 185
Target Start/End: Original strand, 10571269 - 10571430
Alignment:
| Q |
24 |
gtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtgagact |
123 |
Q |
| |
|
|||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||| | | |||||| ||||||| | || |||||||||||||| ||| |
|
|
| T |
10571269 |
gtattcaattaagattttgtacaacttaaaaattgtctattggtattcaaaattctatgaaatttaatagattgttgtcaggaatggattttgtgaaact |
10571368 |
T |
 |
| Q |
124 |
ttttaatgtaaaatgcatctactaacaatctcacacctagccttgagacttttttgtctccc |
185 |
Q |
| |
|
||||| | ||||||| | |||||||||||||||||||| |||| |||||||| |||||||| |
|
|
| T |
10571369 |
ttttagtataaaatgtacatactaacaatctcacacctaaccttaagacttttctgtctccc |
10571430 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 54 - 128
Target Start/End: Complemental strand, 2276101 - 2276027
Alignment:
| Q |
54 |
aattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtgagacttttta |
128 |
Q |
| |
|
||||||||||| ||||||||| |||| |||||||||||||| || || ||||||||||||||||| |||||| |
|
|
| T |
2276101 |
aattgtctattgatattcaaaagtctatagattttaatggattcttttgtataatggattttgtgagatttttta |
2276027 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 26876311 - 26876357
Alignment:
| Q |
25 |
tattcaattcagattttgcacaacttaaaaattgtctattagtattc |
71 |
Q |
| |
|
|||||||| ||||||| ||||||||||||||||||| ||||||||| |
|
|
| T |
26876311 |
tattcaatcaagatttttcacaacttaaaaattgtctcttagtattc |
26876357 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 6902597 - 6902525
Alignment:
| Q |
24 |
gtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggatt |
96 |
Q |
| |
|
||||||||| ||||||| |||||||||||||||||| || |||||||||| | || ||||| |||||||| |
|
|
| T |
6902597 |
gtattcaatcaagattttttacaacttaaaaattgtctcttggtattcaaaaatgtattgatttcaatggatt |
6902525 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 28594367 - 28594263
Alignment:
| Q |
24 |
gtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtgagact |
123 |
Q |
| |
|
|||||||||| ||||| ||||||||| ||| ||||| | |||||||||| | | |||||||||||||| || | ||||||||||||||||||| |
|
|
| T |
28594367 |
gtattcaattaggatttctcacaacttataaaatgtctttcggtattcaaaaattgatagattttaatggattcttttatataatggattttgtgagact |
28594268 |
T |
 |
| Q |
124 |
tttta |
128 |
Q |
| |
|
||||| |
|
|
| T |
28594267 |
tttta |
28594263 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0016 (Bit Score: 107; Significance: 2e-53; HSPs: 1)
Name: scaffold0016
Description:
Target: scaffold0016; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 81713 - 81531
Alignment:
| Q |
19 |
cagtagtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtg |
118 |
Q |
| |
|
|||| |||||||||| |||||||||| |||||||||||||||| | |||||||||| |||| |||||||||||||||||| |||||||||||||||||| |
|
|
| T |
81713 |
cagtggtattcaattgagattttgcataacttaaaaattgtctcctggtattcaaaactctacggattttaatggattgttgtgagtaatggattttgtg |
81614 |
T |
 |
| Q |
119 |
agactttttaatgtaaaatgcatctactaacaatctcacacctagccttgagacttttttgtctcccgcacatagtcttgaga |
201 |
Q |
| |
|
||| | |||| ||||||||| ||||||||||||||||||||||| ||||||||||||| | |||| | ||||||| ||||||| |
|
|
| T |
81613 |
agattgtttagtgtaaaatgtatctactaacaatctcacacctaaccttgagacttttctatctctcacacatagccttgaga |
81531 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0153 (Bit Score: 103; Significance: 5e-51; HSPs: 1)
Name: scaffold0153
Description:
Target: scaffold0153; HSP #1
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 34745 - 34563
Alignment:
| Q |
19 |
cagtagtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtg |
118 |
Q |
| |
|
|||| |||||||||| |||||||||| |||||||||||||||| | ||||||||| |||| |||||||||||||||||| |||||||||||||||||| |
|
|
| T |
34745 |
cagtggtattcaattgagattttgcataacttaaaaattgtctgctgatattcaaaactctacggattttaatggattgttgtgagtaatggattttgtg |
34646 |
T |
 |
| Q |
119 |
agactttttaatgtaaaatgcatctactaacaatctcacacctagccttgagacttttttgtctcccgcacatagtcttgaga |
201 |
Q |
| |
|
||| | |||| ||||||||| ||||||||||||||||||||||| ||||||||||||| | |||| | ||||||| ||||||| |
|
|
| T |
34645 |
agattgtttagtgtaaaatgtatctactaacaatctcacacctaaccttgagacttttctatctctcacacatagccttgaga |
34563 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0237 (Bit Score: 93; Significance: 4e-45; HSPs: 1)
Name: scaffold0237
Description:
Target: scaffold0237; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 19 - 171
Target Start/End: Complemental strand, 21344 - 21192
Alignment:
| Q |
19 |
cagtagtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtg |
118 |
Q |
| |
|
|||| |||||||||| |||||||||| |||||||||||||||||| |||||||||| |||| |||||||||||||||||| ||||||||||||||| || |
|
|
| T |
21344 |
cagtggtattcaattgagattttgcataacttaaaaattgtctatcggtattcaaaactctacggattttaatggattgttgtgagtaatggattttatg |
21245 |
T |
 |
| Q |
119 |
agactttttaatgtaaaatgcatctactaacaatctcacacctagccttgaga |
171 |
Q |
| |
|
||| | |||| ||||||||| | ||||||||||||||||||||| |||||||| |
|
|
| T |
21244 |
agattgtttagtgtaaaatgtacctactaacaatctcacacctaaccttgaga |
21192 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0202 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0202
Description:
Target: scaffold0202; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 19 - 199
Target Start/End: Complemental strand, 16473 - 16309
Alignment:
| Q |
19 |
cagtagtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtg |
118 |
Q |
| |
|
|||| |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||||||||| |
|
|
| T |
16473 |
cagtggtattcaattgagattttgcataacttaaaaattgtctattagtattcaaaattcta------------------tgtgagtaatggattttgtg |
16392 |
T |
 |
| Q |
119 |
agactttttaatgtaaaatgcatctactaacaatctcacacc--tagccttgagacttttttgtctcccgcacatagtcttga |
199 |
Q |
| |
|
||| | |||| |||||| || | ||||||||||||||||||| || ||||||||||||| |||||| | ||||||| ||||| |
|
|
| T |
16391 |
agattgtttagtgtaaagtgtacctactaacaatctcacacctataaccttgagacttttatgtctctcacacatagccttga |
16309 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0472 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0472
Description:
Target: scaffold0472; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 1811 - 1707
Alignment:
| Q |
24 |
gtattcaattcagattttgcacaacttaaaaattgtctattagtattcaaaattctaaggattttaatggattgttatgagtaatggattttgtgagact |
123 |
Q |
| |
|
|||||||||| |||||| ||||||| ||| |||||||| |||||||||| ||| |||||||||||||| || || |||||||||||||||||| |
|
|
| T |
1811 |
gtattcaattaagatttgtaccaacttataaaatgtctattggtattcaaaaatctgcagattttaatggattcttttgtagaatggattttgtgagact |
1712 |
T |
 |
| Q |
124 |
tttta |
128 |
Q |
| |
|
||||| |
|
|
| T |
1711 |
tttta |
1707 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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