View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14399_low_26 (Length: 231)
Name: NF14399_low_26
Description: NF14399
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14399_low_26 |
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Alignment Details
Target: chr2 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 43760333 - 43760568
Alignment:
| Q |
1 |
tcctaatttatttgacagaatgcaaaacatcat----------atgtagcttgtcaatttccttgaattacgtgtcgtgttggatgttacaaatttataa |
90 |
Q |
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| T |
43760333 |
tcctaatttatttgacagaatgcaaaacatcatcctgtcttatatgtagcttgtcaatttccttgaattacgtgtcgtgttggatgttacaaatttataa |
43760432 |
T |
|
| Q |
91 |
taagcttgattgttagatatacttctaattaaacaatgtgttgctagctatagtcataggcaatgccgattaaggtgtgtgataatgcacattgtattta |
190 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
43760433 |
taagcttgattgttagatatacttctaattaaacaatgtgttgctagctatagtcataggcaatgccgattaaggtgtgtgataatgcacattgtattta |
43760532 |
T |
|
| Q |
191 |
atttgagtatgttcttatttgtttgatgtaccaatt |
226 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
43760533 |
atttgagtatgttcttatttgtttgatgtaccaatt |
43760568 |
T |
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