View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14402_high_5 (Length: 251)
Name: NF14402_high_5
Description: NF14402
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14402_high_5 |
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Alignment Details
Target: chr4 (Bit Score: 174; Significance: 1e-93; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 4058029 - 4058268
Alignment:
| Q |
1 |
tttcaaaataatttaaagatatatttgaaattaaacatacgtcaattaagttaaaaataattcgtttactttgcgtgaaagaatccaacttgtcaaatat |
100 |
Q |
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| T |
4058029 |
tttcaaaataatttaaagatatatttaaaattaaacatacgtcaattaagttaaaaataattcgtttaatttgcgtgaaagaatccaacttgttaaatat |
4058128 |
T |
|
| Q |
101 |
taaaatcgtacaacaaataagagaaggagacnnnnnnnnnnnnnngaaagagaaggagacattttattaacttcaacattaagaacaccaaattagttct |
200 |
Q |
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||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4058129 |
taaaatcacacaacaaataagagaaggagac-tttttttttttttgaaagagaaggagacattttattaacttcaacattaagaacaccaaattagttct |
4058227 |
T |
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| Q |
201 |
atggttggagatgccctaatatagtttttctttcggttcat |
241 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |
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| T |
4058228 |
atggttggagatgccctaatatagtttttctttcggttcat |
4058268 |
T |
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