View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14402_high_6 (Length: 237)

Name: NF14402_high_6
Description: NF14402
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14402_high_6
NF14402_high_6
[»] chr7 (57 HSPs)
chr7 (19-140)||(4925037-4925158)
chr7 (19-140)||(46555260-46555381)
chr7 (19-140)||(20120122-20120243)
chr7 (19-140)||(44459068-44459189)
chr7 (19-140)||(41858314-41858435)
chr7 (22-140)||(44882853-44882971)
chr7 (19-140)||(725298-725419)
chr7 (19-140)||(3415920-3416041)
chr7 (19-140)||(9663366-9663487)
chr7 (19-140)||(28589362-28589483)
chr7 (19-140)||(47909152-47909273)
chr7 (19-140)||(48683357-48683478)
chr7 (19-140)||(48951943-48952064)
chr7 (19-139)||(16277336-16277456)
chr7 (19-140)||(18994732-18994853)
chr7 (19-140)||(21815498-21815619)
chr7 (19-140)||(40015452-40015573)
chr7 (21-140)||(33246404-33246523)
chr7 (19-137)||(46000807-46000925)
chr7 (19-140)||(48607396-48607517)
chr7 (19-140)||(41336398-41336520)
chr7 (19-139)||(17968084-17968203)
chr7 (19-140)||(23594334-23594456)
chr7 (19-140)||(47503718-47503842)
chr7 (28-134)||(21729808-21729914)
chr7 (19-140)||(30759858-30759982)
chr7 (19-140)||(46936049-46936171)
chr7 (28-101)||(21736277-21736350)
chr7 (28-101)||(30759210-30759283)
chr7 (33-101)||(44521224-44521292)
chr7 (19-81)||(41289428-41289490)
chr7 (66-140)||(44522699-44522773)
chr7 (28-101)||(41289281-41289354)
chr7 (28-101)||(46935410-46935483)
chr7 (28-101)||(47504416-47504489)
chr7 (28-99)||(724657-724728)
chr7 (28-99)||(3415277-3415348)
chr7 (28-99)||(16274396-16274467)
chr7 (28-99)||(17967435-17967506)
chr7 (28-99)||(20120812-20120883)
chr7 (28-99)||(21816189-21816260)
chr7 (28-99)||(40014811-40014882)
chr7 (28-99)||(41337091-41337162)
chr7 (28-101)||(5373666-5373739)
chr7 (28-97)||(41857777-41857846)
chr7 (34-99)||(46554627-46554692)
chr7 (28-101)||(48606746-48606819)
chr7 (28-101)||(48684047-48684120)
chr7 (28-99)||(28588738-28588809)
chr7 (28-99)||(48951406-48951477)
chr7 (33-99)||(33245768-33245834)
chr7 (33-96)||(47908135-47908198)
chr7 (32-101)||(23593697-23593760)
chr7 (28-101)||(8392592-8392665)
chr7 (105-140)||(5374272-5374307)
chr7 (64-121)||(8393266-8393323)
chr7 (28-101)||(9662720-9662793)
[»] chr6 (29 HSPs)
chr6 (19-140)||(17550694-17550815)
chr6 (19-140)||(11837454-11837575)
chr6 (19-140)||(11154486-11154607)
chr6 (19-140)||(955452-955573)
chr6 (19-140)||(4589688-4589809)
chr6 (19-140)||(16918484-16918605)
chr6 (19-140)||(14104079-14104200)
chr6 (21-140)||(27782558-27782677)
chr6 (19-140)||(21861132-21861253)
chr6 (28-140)||(23580374-23580486)
chr6 (19-140)||(25109629-25109749)
chr6 (19-140)||(28578696-28578817)
chr6 (19-140)||(27438486-27438607)
chr6 (19-139)||(24083211-24083331)
chr6 (28-101)||(5687486-5687559)
chr6 (28-101)||(11153848-11153921)
chr6 (28-101)||(28579370-28579443)
chr6 (28-101)||(24083889-24083962)
chr6 (28-96)||(14104763-14104831)
chr6 (28-99)||(16918941-16919012)
chr6 (28-99)||(27783245-27783316)
chr6 (28-101)||(954802-954875)
chr6 (28-101)||(15288280-15288353)
chr6 (28-96)||(11836816-11836884)
chr6 (28-99)||(23573843-23573914)
chr6 (46-101)||(25119045-25119100)
chr6 (28-99)||(27440678-27440749)
chr6 (28-101)||(1090555-1090628)
chr6 (34-99)||(4589071-4589136)
[»] chr3 (81 HSPs)
chr3 (19-140)||(18410333-18410454)
chr3 (19-140)||(4232888-4233009)
chr3 (19-140)||(16008905-16009026)
chr3 (19-140)||(41101788-41101909)
chr3 (19-140)||(44843006-44843127)
chr3 (19-139)||(50548293-50548413)
chr3 (19-140)||(37219906-37220027)
chr3 (19-140)||(45053528-45053649)
chr3 (19-140)||(47912751-47912872)
chr3 (21-140)||(11121720-11121839)
chr3 (19-137)||(45170112-45170230)
chr3 (19-140)||(6175458-6175579)
chr3 (19-140)||(30440100-30440221)
chr3 (19-140)||(37785554-37785675)
chr3 (19-140)||(41697905-41698026)
chr3 (19-139)||(27321125-27321245)
chr3 (23-140)||(13213582-13213700)
chr3 (19-140)||(16464036-16464157)
chr3 (19-140)||(51722609-51722730)
chr3 (19-139)||(30043297-30043417)
chr3 (19-137)||(23019905-23020023)
chr3 (19-139)||(27126327-27126447)
chr3 (19-140)||(10827536-10827657)
chr3 (23-140)||(38696966-38697083)
chr3 (19-140)||(43338466-43338587)
chr3 (23-137)||(53778183-53778297)
chr3 (19-140)||(8851594-8851713)
chr3 (19-140)||(37181779-37181900)
chr3 (19-140)||(38235625-38235745)
chr3 (21-140)||(27325468-27325587)
chr3 (21-140)||(27331705-27331824)
chr3 (20-140)||(55411315-55411431)
chr3 (19-140)||(30363489-30363610)
chr3 (19-139)||(22428749-22428869)
chr3 (19-101)||(15084411-15084493)
chr3 (19-140)||(40423811-40423927)
chr3 (19-140)||(3892493-3892618)
chr3 (28-140)||(22604994-22605106)
chr3 (19-88)||(40906280-40906349)
chr3 (22-115)||(22732456-22732549)
chr3 (28-101)||(55412019-55412092)
chr3 (28-101)||(53777536-53777609)
chr3 (30-114)||(42826125-42826209)
chr3 (28-99)||(16009597-16009668)
chr3 (28-101)||(31312799-31312872)
chr3 (28-101)||(37181162-37181235)
chr3 (28-101)||(51721977-51722050)
chr3 (33-101)||(18762739-18762807)
chr3 (23-99)||(22605670-22605746)
chr3 (28-99)||(2218799-2218870)
chr3 (28-99)||(16464727-16464798)
chr3 (28-99)||(18411024-18411095)
chr3 (28-99)||(27126986-27127057)
chr3 (28-99)||(27324854-27324925)
chr3 (28-99)||(30042659-30042730)
chr3 (28-99)||(30362771-30362842)
chr3 (28-99)||(44842366-44842437)
chr3 (28-99)||(50610247-50610318)
chr3 (33-99)||(40906946-40907012)
chr3 (28-101)||(38236325-38236398)
chr3 (28-99)||(4232093-4232164)
chr3 (28-99)||(11122410-11122481)
chr3 (28-99)||(27331091-27331162)
chr3 (28-99)||(30439490-30439561)
chr3 (28-99)||(37219370-37219441)
chr3 (28-99)||(43339165-43339236)
chr3 (90-140)||(2218179-2218229)
chr3 (33-99)||(47912133-47912199)
chr3 (28-101)||(22731642-22731715)
chr3 (28-101)||(42826794-42826867)
chr3 (28-99)||(41102481-41102552)
chr3 (28-99)||(41697264-41697335)
chr3 (28-99)||(45052887-45052958)
chr3 (28-99)||(45170799-45170870)
chr3 (28-99)||(50547651-50547722)
chr3 (28-99)||(52746485-52746556)
chr3 (43-101)||(10826917-10826975)
chr3 (28-101)||(38697659-38697732)
chr3 (28-76)||(37786243-37786291)
chr3 (28-99)||(8850952-8851023)
chr3 (28-95)||(23020599-23020666)
[»] chr8 (59 HSPs)
chr8 (19-140)||(25583413-25583534)
chr8 (19-140)||(276872-276993)
chr8 (19-140)||(638856-638977)
chr8 (19-140)||(824662-824783)
chr8 (19-140)||(3704942-3705063)
chr8 (19-140)||(3850167-3850288)
chr8 (19-138)||(17948307-17948426)
chr8 (19-137)||(16096049-16096167)
chr8 (19-140)||(15883233-15883354)
chr8 (19-140)||(23346975-23347096)
chr8 (19-140)||(27912534-27912655)
chr8 (19-140)||(27958953-27959074)
chr8 (21-140)||(2082086-2082205)
chr8 (19-137)||(13141120-13141238)
chr8 (19-140)||(4622555-4622676)
chr8 (19-140)||(6093464-6093585)
chr8 (19-140)||(18955384-18955505)
chr8 (20-137)||(28085715-28085832)
chr8 (23-140)||(41545116-41545233)
chr8 (19-139)||(42735734-42735854)
chr8 (29-140)||(39858160-39858271)
chr8 (19-140)||(30556501-30556621)
chr8 (19-137)||(43694982-43695100)
chr8 (28-140)||(40304187-40304299)
chr8 (19-134)||(44256233-44256348)
chr8 (20-137)||(30105881-30105998)
chr8 (21-140)||(42645458-42645577)
chr8 (19-98)||(38576901-38576979)
chr8 (19-137)||(45409031-45409147)
chr8 (22-115)||(5587003-5587096)
chr8 (28-101)||(42646154-42646227)
chr8 (28-101)||(45408394-45408467)
chr8 (28-99)||(13140477-13140548)
chr8 (28-101)||(30555851-30555924)
chr8 (28-101)||(39858817-39858890)
chr8 (28-101)||(43694329-43694402)
chr8 (28-99)||(277565-277636)
chr8 (28-99)||(638213-638284)
chr8 (28-99)||(824019-824090)
chr8 (28-99)||(18956282-18956353)
chr8 (28-99)||(26950015-26950086)
chr8 (28-99)||(38060410-38060481)
chr8 (28-99)||(40303533-40303604)
chr8 (28-98)||(41545669-41545739)
chr8 (28-101)||(6095632-6095705)
chr8 (22-99)||(23346326-23346403)
chr8 (28-101)||(30111564-30111637)
chr8 (28-97)||(40617329-40617398)
chr8 (28-101)||(42736413-42736486)
chr8 (28-99)||(15882603-15882674)
chr8 (28-99)||(27913225-27913296)
chr8 (28-99)||(27959644-27959715)
chr8 (28-99)||(44256923-44256994)
chr8 (28-101)||(5587837-5587910)
chr8 (28-101)||(18088700-18088773)
chr8 (33-101)||(3850855-3850923)
chr8 (19-58)||(18089325-18089364)
chr8 (28-101)||(36192258-36192331)
chr8 (87-140)||(18089270-18089323)
[»] chr5 (38 HSPs)
chr5 (19-140)||(42612055-42612176)
chr5 (19-140)||(12499492-12499613)
chr5 (21-140)||(30130756-30130875)
chr5 (19-140)||(745408-745529)
chr5 (19-140)||(9591892-9592013)
chr5 (19-140)||(19665045-19665166)
chr5 (19-140)||(20545991-20546111)
chr5 (19-140)||(27019933-27020054)
chr5 (21-140)||(13305264-13305383)
chr5 (19-137)||(37270520-37270638)
chr5 (19-140)||(27550871-27550992)
chr5 (19-140)||(39588541-39588663)
chr5 (19-140)||(824648-824769)
chr5 (19-140)||(11984733-11984854)
chr5 (19-140)||(9987156-9987277)
chr5 (21-140)||(15420472-15420596)
chr5 (19-140)||(7180892-7181013)
chr5 (19-140)||(31551963-31552089)
chr5 (33-101)||(9986513-9986581)
chr5 (22-99)||(744758-744835)
chr5 (19-88)||(11077010-11077079)
chr5 (28-101)||(27551564-27551637)
chr5 (28-99)||(9592583-9592654)
chr5 (74-137)||(34654187-34654250)
chr5 (28-99)||(15421126-15421197)
chr5 (28-99)||(19665736-19665807)
chr5 (28-99)||(20545369-20545440)
chr5 (28-99)||(30130115-30130186)
chr5 (28-99)||(39589215-39589286)
chr5 (28-101)||(13304617-13304690)
chr5 (28-101)||(37271198-37271271)
chr5 (28-99)||(824002-824073)
chr5 (28-99)||(12500183-12500254)
chr5 (28-99)||(27019292-27019363)
chr5 (28-101)||(11985429-11985502)
chr5 (28-96)||(31551317-31551385)
chr5 (28-99)||(37939660-37939731)
chr5 (28-99)||(42611424-42611495)
[»] chr4 (49 HSPs)
chr4 (19-140)||(16664760-16664881)
chr4 (19-140)||(20786861-20786982)
chr4 (19-140)||(3035640-3035761)
chr4 (19-140)||(54919498-54919619)
chr4 (21-140)||(8939518-8939637)
chr4 (19-140)||(4653072-4653193)
chr4 (19-140)||(13534390-13534511)
chr4 (19-140)||(17361241-17361362)
chr4 (19-140)||(23419131-23419252)
chr4 (19-140)||(30827329-30827450)
chr4 (19-140)||(35824637-35824758)
chr4 (19-140)||(46717809-46717930)
chr4 (19-140)||(52447489-52447610)
chr4 (30-140)||(49970050-49970160)
chr4 (19-140)||(20353901-20354022)
chr4 (19-140)||(49873835-49873956)
chr4 (28-140)||(27962270-27962382)
chr4 (19-137)||(23933384-23933502)
chr4 (38-140)||(35045118-35045220)
chr4 (19-140)||(34073133-34073253)
chr4 (19-134)||(31292434-31292549)
chr4 (23-119)||(7487388-7487484)
chr4 (19-140)||(31309743-31309864)
chr4 (19-139)||(50496011-50496136)
chr4 (64-140)||(55450947-55451023)
chr4 (28-101)||(34073803-34073876)
chr4 (28-101)||(35825334-35825407)
chr4 (28-101)||(46718507-46718580)
chr4 (33-101)||(49874534-49874602)
chr4 (28-99)||(3034999-3035070)
chr4 (28-99)||(4653763-4653834)
chr4 (28-99)||(16665451-16665522)
chr4 (28-99)||(17361893-17361964)
chr4 (28-99)||(20786277-20786348)
chr4 (28-99)||(23418488-23418559)
chr4 (28-99)||(52448180-52448251)
chr4 (28-99)||(54920190-54920261)
chr4 (33-99)||(41040735-41040801)
chr4 (28-101)||(27958667-27958740)
chr4 (28-101)||(31291870-31291943)
chr4 (28-101)||(35045759-35045832)
chr4 (28-99)||(20342525-20342596)
chr4 (28-99)||(20353250-20353321)
chr4 (34-101)||(23932737-23932804)
chr4 (28-81)||(9368075-9368128)
chr4 (28-99)||(7488057-7488128)
chr4 (28-101)||(50495443-50495513)
chr4 (28-101)||(13533744-13533817)
chr4 (23-55)||(41041352-41041384)
[»] chr2 (36 HSPs)
chr2 (19-140)||(38282077-38282198)
chr2 (19-140)||(6644756-6644877)
chr2 (19-140)||(15152669-15152790)
chr2 (19-140)||(25223570-25223691)
chr2 (19-139)||(37725319-37725439)
chr2 (19-140)||(4738055-4738176)
chr2 (20-140)||(77419-77539)
chr2 (19-140)||(2292117-2292238)
chr2 (19-140)||(3851542-3851663)
chr2 (19-140)||(3906708-3906829)
chr2 (21-140)||(3754699-3754818)
chr2 (19-140)||(15399079-15399200)
chr2 (19-140)||(39774919-39775038)
chr2 (37-139)||(39966976-39967078)
chr2 (19-140)||(42080615-42080736)
chr2 (19-140)||(27551413-27551534)
chr2 (19-140)||(28391618-28391739)
chr2 (19-99)||(14005921-14006001)
chr2 (28-101)||(27550783-27550856)
chr2 (20-101)||(2291460-2291541)
chr2 (28-101)||(4737406-4737479)
chr2 (28-99)||(76805-76876)
chr2 (28-99)||(28391122-28391193)
chr2 (28-99)||(37724680-37724751)
chr2 (28-99)||(38281436-38281507)
chr2 (28-101)||(1054311-1054384)
chr2 (28-101)||(15153356-15153429)
chr2 (28-101)||(15399781-15399854)
chr2 (33-101)||(6645451-6645519)
chr2 (33-99)||(3906084-3906150)
chr2 (22-99)||(40494659-40494736)
chr2 (33-101)||(39068178-39068246)
chr2 (28-101)||(39774356-39774426)
chr2 (28-99)||(39966334-39966405)
chr2 (28-101)||(3850969-3851039)
chr2 (28-101)||(42080038-42080108)
[»] chr1 (44 HSPs)
chr1 (19-140)||(33704690-33704811)
chr1 (19-140)||(36307932-36308053)
chr1 (19-140)||(7153014-7153135)
chr1 (19-140)||(14488620-14488741)
chr1 (19-140)||(24781154-24781275)
chr1 (19-140)||(29521723-29521844)
chr1 (19-140)||(31030180-31030301)
chr1 (21-139)||(10772825-10772943)
chr1 (19-140)||(36730756-36730877)
chr1 (19-140)||(48127864-48127985)
chr1 (19-139)||(44512219-44512339)
chr1 (19-140)||(12768330-12768451)
chr1 (19-140)||(35954507-35954628)
chr1 (19-140)||(25655940-25656061)
chr1 (23-137)||(30302822-30302936)
chr1 (20-137)||(33006261-33006378)
chr1 (19-140)||(5326809-5326930)
chr1 (20-140)||(46118328-46118447)
chr1 (19-101)||(29649529-29649611)
chr1 (19-140)||(52404691-52404809)
chr1 (19-81)||(51086864-51086926)
chr1 (28-101)||(46463911-46463984)
chr1 (28-99)||(33705385-33705456)
chr1 (28-101)||(25656628-25656701)
chr1 (28-101)||(30302164-30302237)
chr1 (28-101)||(33005597-33005670)
chr1 (28-99)||(7153705-7153776)
chr1 (28-99)||(10773516-10773587)
chr1 (28-99)||(36308627-36308698)
chr1 (28-137)||(29648716-29648834)
chr1 (35-101)||(36731454-36731520)
chr1 (28-101)||(35955207-35955280)
chr1 (28-101)||(51087508-51087581)
chr1 (63-140)||(52405835-52405910)
chr1 (63-140)||(52406167-52406242)
chr1 (34-88)||(7556365-7556419)
chr1 (33-99)||(44511587-44511653)
chr1 (28-101)||(29521150-29521223)
chr1 (28-101)||(46119026-46119099)
chr1 (35-96)||(52405378-52405439)
chr1 (35-96)||(52406811-52406872)
chr1 (28-99)||(14487975-14488046)
chr1 (28-99)||(14536564-14536635)
chr1 (20-58)||(30838589-30838627)
[»] scaffold0259 (2 HSPs)
scaffold0259 (19-140)||(5883-6004)
scaffold0259 (20-101)||(5136-5217)
[»] scaffold0060 (1 HSPs)
scaffold0060 (19-140)||(56409-56530)
[»] scaffold0208 (2 HSPs)
scaffold0208 (19-137)||(5589-5707)
scaffold0208 (28-101)||(4987-5060)
[»] scaffold0003 (2 HSPs)
scaffold0003 (19-140)||(48755-48876)
scaffold0003 (28-99)||(46612-46683)
[»] scaffold0115 (2 HSPs)
scaffold0115 (19-134)||(20993-21107)
scaffold0115 (22-99)||(22769-22846)
[»] scaffold0075 (1 HSPs)
scaffold0075 (28-96)||(18473-18541)


Alignment Details
Target: chr7 (Bit Score: 114; Significance: 6e-58; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 4925037 - 4925158
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  4925037 agacttataacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttcttcaattccagaaccccg 4925136  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  4925137 aacgtgagaacaaaaacatctc 4925158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 46555381 - 46555260
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  46555381 agacttatgacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttacattcataaaatttcttccattccagaaccccg 46555282  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  46555281 aacgtgagaacaaaaacatctc 46555260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 20120122 - 20120243
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  20120122 agacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttacattcataaaatttcttccattccagaaccccg 20120221  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  20120222 aacgtgagaacaaaaacatctc 20120243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 44459189 - 44459068
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  44459189 agacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttacattcataaaatttcttccattccagaaccccg 44459090  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  44459089 aacgtgagaacaaaaacatctc 44459068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 41858435 - 41858314
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  41858435 agacttataacaaataaaattttacatcaaatttctttcatctgtatgtccttaaattcatcatttacattcataaaatttcttccattccagaaccccg 41858336  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  41858335 aacgtgagaacaaaaacatctc 41858314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 22 - 140
Target Start/End: Original strand, 44882853 - 44882971
Alignment:
Q  22 cttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccgaac 121  Q
    ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  | |||||||||||||||||    
T  44882853 cttataacaaataaaattttacatcaaatttctttcatctaaatgtccttaaattcatcatttacattcataaaatttcatccattccagaaccccgaac 44882952  T
Q  122 gtgagaacaaaaacatctc 140  Q
    |||||||||||||||||||    
T  44882953 gtgagaacaaaaacatctc 44882971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 725419 - 725298
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | |||||| |||||||    
T  725419 agacttataataaataaaattttacatcaaatttctttcatctcgatgtccttaaattcatcatttacattcataaaatttcttccattccaaaaccccg 725320  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  725319 aacgtgagaacaaaaacatctc 725298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 3416041 - 3415920
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| | |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| | ||||||||||||||    
T  3416041 agacttataaaaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttactttcataaaatttcttccattccagaaccccg 3415942  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  3415941 aacgtgagaacaaaaacatctc 3415920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 9663487 - 9663366
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||    
T  9663487 agacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcacttacattcataaaatttcttccattccagaaccccg 9663388  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||| ||||||||||||||||    
T  9663387 aacgttagaacaaaaacatctc 9663366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 28589483 - 28589362
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| | |||||| |||||||    
T  28589483 agacttataacaaataaaattttacatcaaatttctttcatttggatgtccttaaattcatcatttacattcataaaatttcttccattccaaaaccccg 28589384  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  28589383 aacgtgagaacaaaaacatctc 28589362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 47909273 - 47909152
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  47909273 agacttataacaaataaaattttacaacaaatttctttcatctggatgtccttaaattcatcatttacattcataaaatttcttccattccagaaccccg 47909174  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||| ||||    
T  47909173 aacgtgagaacaaaaacttctc 47909152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 48683357 - 48683478
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||| | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | |||| |||||||||    
T  48683357 agacttgtaacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttacattcataaaatttcttccattctagaaccccg 48683456  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  48683457 aacgtgagaacaaaaacatctc 48683478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 48952064 - 48951943
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| ||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  48952064 agacttataacaaataaaattttaaatcaaatttctttcatctgtatgtccttaaattcatcatttacattcataaaatttcttccattccagaaccccg 48951965  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  48951964 aacgtgagaacaaaaacatctc 48951943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 19 - 139
Target Start/End: Complemental strand, 16277456 - 16277336
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | |||| |||||||||    
T  16277456 agacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttacattcataaaatttcttccattctagaaccccg 16277357  T
Q  119 aacgtgagaacaaaaacatct 139  Q
    |||||| ||||||||||||||    
T  16277356 aacgtgggaacaaaaacatct 16277336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 18994853 - 18994732
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||| | | ||||||||||||||    
T  18994853 agacttataacaaataaaattttacatcaaatttctttcatctggatgttcttaacttcatcatttacattcataaaatttattccattccagaaccccg 18994754  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  18994753 aacgtgagaacaaaaacatctc 18994732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 21815498 - 21815619
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| | |||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| | |||| |||||||||    
T  21815498 agacttataaaaaataaaattttacatcaaatttctttcatctggatgtctttaaattcatcatttacattcataaaatttcttccattctagaaccccg 21815597  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  21815598 aacgtgagaacaaaaacatctc 21815619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 40015573 - 40015452
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| | ||||||||||||      
T  40015573 agacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaatttatcatttacattcataaaatttcttccattccagaacccta 40015474  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  40015473 aacgtgagaacaaaaacatctc 40015452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 21 - 140
Target Start/End: Complemental strand, 33246523 - 33246404
Alignment:
Q  21 acttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccgaa 120  Q
    |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| | |||| |||||||||||    
T  33246523 acttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttatattcataaaatttcttccattctagaaccccgaa 33246424  T
Q  121 cgtgagaacaaaaacatctc 140  Q
    ||||| ||||||||||||||    
T  33246423 cgtgaaaacaaaaacatctc 33246404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 19 - 137
Target Start/End: Original strand, 46000807 - 46000925
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||     
T  46000807 agacttataacaaataaagttttacatcaaatttctttcatctggatgtccttaaattcatcacttacattcataaaatttcttcaattccagaacccca 46000906  T
Q  119 aacgtgagaacaaaaacat 137  Q
    |||||||||| ||||||||    
T  46000907 aacgtgagaaaaaaaacat 46000925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 48607517 - 48607396
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| ||| || ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| | | ||||||||||||||    
T  48607517 agacttataacacatcaaattttacatcaaatttctttcatctggatgtccttaaattcatcacttacattcataaaatttattccattccagaaccccg 48607418  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  48607417 aacgtgagaacaaaaacatctc 48607396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 41336398 - 41336520
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaa-tttctacaattccagaacccc 117  Q
    |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||| | | ||| |||||||||    
T  41336398 agacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaatttatcatttacattcataaaatttttttccatttcagaacccc 41336497  T
Q  118 gaacgtgagaacaaaaacatctc 140  Q
     ||||||||||||||||||||||    
T  41336498 aaacgtgagaacaaaaacatctc 41336520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 19 - 139
Target Start/End: Complemental strand, 17968203 - 17968084
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||| | |||| | ||| | |    
T  17968203 agacttataacaaataaaattttacatcaaattt-tttcatctggatgtccttaaattcatcacttacattcataaaatttcttccattctaaaactcag 17968105  T
Q  119 aacgtgagaacaaaaacatct 139  Q
    |||||||||||||||||||||    
T  17968104 aacgtgagaacaaaaacatct 17968084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 23594456 - 23594334
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttcttt-catctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaacccc 117  Q
    |||||||| ||||||||||||||||||||| ||| ||| ||| | ||||||||||||||||||| ||||||||||||||||||| | |||| | ||||||    
T  23594456 agacttataacaaataaaattttacatcaatttttttttcatgtggatgtccttaaattcatcacttacattcataaaatttcttccattctaaaacccc 23594357  T
Q  118 gaacgtgagaacaaaaacatctc 140  Q
    |||||||||||||||||||||||    
T  23594356 gaacgtgagaacaaaaacatctc 23594334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 47503718 - 47503842
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaa---ttcatcatttacattcataaaatttctacaattccagaacc 115  Q
    |||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||   ||||||| |||| | |||||||||||| | |||| | ||||    
T  47503718 agacttataacaaataaaattttacatcaaatttttttcatctggatgtccttaaattcttcatcacttacttgcataaaatttcttccattctaaaacc 47503817  T
Q  116 ccgaacgtgagaacaaaaacatctc 140  Q
    |||||||||||||||||||||||||    
T  47503818 ccgaacgtgagaacaaaaacatctc 47503842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 28 - 134
Target Start/End: Original strand, 21729808 - 21729914
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccgaacgtgaga 127  Q
    ||||||||||||||||||||| ||| ||| |||| ||||||||||||||||||| ||||||||||||||||||| | |||||| |||||||||| |||||    
T  21729808 acaaataaaattttacatcaatttttttttatctggatgtccttaaattcatcaattacattcataaaatttcttccattccaaaaccccgaacttgaga 21729907  T
Q  128 acaaaaa 134  Q
    | |||||    
T  21729908 aaaaaaa 21729914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 30759982 - 30759858
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttcttt---catctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaacc 115  Q
    |||||||| ||||||||||||||||||||| ||| |||   ||| |  |||||||||||||||||| ||||||||||||||||||| | |||| | ||||    
T  30759982 agacttataacaaataaaattttacatcaatttttttttttcatttgaatgtccttaaattcatcacttacattcataaaatttcttccattctaaaacc 30759883  T
Q  116 ccgaacgtgagaacaaaaacatctc 140  Q
    |||||||||||||||||||||||||    
T  30759882 ccgaacgtgagaacaaaaacatctc 30759858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 46936171 - 46936049
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttc-atctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaacccc 117  Q
    |||||||| ||||||||||||||||||||||||| |||  |||| ||||| ||||||||||||| ||| ||| ||||||||||| | |||| ||||||||    
T  46936171 agacttataacaaataaaattttacatcaaatttttttttatctggatgttcttaaattcatcacttatatttataaaatttcttccattcaagaacccc 46936072  T
Q  118 gaacgtgagaacaaaaacatctc 140  Q
    ||| |||||||||||||||||||    
T  46936071 gaaagtgagaacaaaaacatctc 46936049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 21736350 - 21736277
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    |||| |||||||| ||||||||||||| ||||||| |||||||||| || ||||||||||||||||||||||||    
T  21736350 acaattaaaatttcacatcaaatttctgtcatctaaatgtccttaagtttatcatttacattcataaaatttct 21736277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 30759210 - 30759283
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    |||| |||||||| ||||||||||||||||||||  ||||||||||||| |||| |||||||||||||||||||    
T  30759210 acaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcagttacattcataaaatttct 30759283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 44521224 - 44521292
Alignment:
Q  33 taaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    |||||||| ||||||||||||||||||||  ||||||||||||| |||| |||||||||||||||||||    
T  44521224 taaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcagttacattcataaaatttct 44521292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 41289490 - 41289428
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatca 81  Q
    |||||||| |||||||||||||||||| |||||||||||||||  ||||||||||||||||||    
T  41289490 agacttataacaaataaaattttacataaaatttctttcatctgaatgtccttaaattcatca 41289428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 66 - 140
Target Start/End: Complemental strand, 44522773 - 44522699
Alignment:
Q  66 gtccttaaattcatcatttacattcataaaatttctacaattccagaaccccgaacgtgagaacaaaaacatctc 140  Q
    |||||||||||||||| ||||||||||||||||||| | | || | || ||||||||||||||||||||||||||    
T  44522773 gtccttaaattcatcacttacattcataaaatttcttccactctaaaatcccgaacgtgagaacaaaaacatctc 44522699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 41289281 - 41289354
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    |||| |||||||| ||||||||||||||||||||  |||||||||| || |||| |||||||||||||||||||    
T  41289281 acaattaaaatttcacatcaaatttctttcatctgaatgtccttaagtttatcagttacattcataaaatttct 41289354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 46935410 - 46935483
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    |||| |||||||| ||||||||||||||||||||  ||||||||||||| |||  |||||||||||||||||||    
T  46935410 acaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatctgttacattcataaaatttct 46935483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 47504489 - 47504416
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    |||| |||||||| ||||||||||||||||||||  ||||||||||||| |||  |||||||||||||||||||    
T  47504489 acaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcggttacattcataaaatttct 47504416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 724657 - 724728
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||| ||||||||||||||||||||  ||||||||||||| |||| ||| |||||||||||||    
T  724657 acaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcagttatattcataaaattt 724728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 3415277 - 3415348
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||| ||||||||||||||||||||  ||||||||||||| |||| ||| |||||||||||||    
T  3415277 acaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcagttatattcataaaattt 3415348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 16274396 - 16274467
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||| ||||||||||||||||||||  ||||||||||||| |||| ||| |||||||||||||    
T  16274396 acaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcagttatattcataaaattt 16274467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 17967435 - 17967506
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||| ||||||||||||||||||||  |||| |||||||| |||| |||||||||||||||||    
T  17967435 acaattaaaatttcacatcaaatttctttcatctgaatgtgcttaaatttatcagttacattcataaaattt 17967506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 20120883 - 20120812
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||| ||||||||||||||||||||  ||||||||||||| |||| ||| |||||||||||||    
T  20120883 acaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcagttatattcataaaattt 20120812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 21816260 - 21816189
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||| ||||||||||||||||||||  ||||||||||||| |||| ||| |||||||||||||    
T  21816260 acaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcagttatattcataaaattt 21816189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 40014811 - 40014882
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||| ||||||||||||||||||||  ||||||||||||| |||| ||| |||||||||||||    
T  40014811 acaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcagttatattcataaaattt 40014882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 41337162 - 41337091
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||| ||||||||||||||||||||  ||||||||||||| |||| ||| |||||||||||||    
T  41337162 acaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcagttatattcataaaattt 41337091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 5373666 - 5373739
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    |||| |||||||| |||||||||||||||||| |  ||||||||||||| |||| ||| |||||||||||||||    
T  5373666 acaattaaaatttcacatcaaatttctttcatgtgaatgtccttaaatttatcagttatattcataaaatttct 5373739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 97
Target Start/End: Original strand, 41857777 - 41857846
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaat 97  Q
    |||| |||||||| ||||||||||||||||||||  ||||||||||||| |||| ||| |||||||||||    
T  41857777 acaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcagttatattcataaaat 41857846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 34 - 99
Target Start/End: Original strand, 46554627 - 46554692
Alignment:
Q  34 aaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    ||||||| ||||||||||||||||||||  ||||||||||||| |||| ||| |||||||||||||    
T  46554627 aaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcagttatattcataaaattt 46554692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 48606746 - 48606819
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    |||| |||||||| ||||||||||||||| ||||  ||||||||||||| |||| ||| |||||||||||||||    
T  48606746 acaattaaaatttgacatcaaatttcttttatctgaatgtccttaaatttatcagttatattcataaaatttct 48606819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 48684120 - 48684047
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    |||| |||||||| |||||||||||||||||||   ||||||||||||| |||| ||| |||||||||||||||    
T  48684120 acaattaaaatttcacatcaaatttctttcatccgaatgtccttaaatttatcagttatattcataaaatttct 48684047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 28588738 - 28588809
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||| ||||||||||||||||||||  || |||||||||| |||| ||| |||||||||||||    
T  28588738 acaattaaaatttcacatcaaatttctttcatctgaatttccttaaatttatcagttatattcataaaattt 28588809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 48951406 - 48951477
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||| ||||||||||||||||||||  ||||| ||||||| |||| ||| |||||||||||||    
T  48951406 acaattaaaatttcacatcaaatttctttcatctgaatgtcattaaatttatcagttatattcataaaattt 48951477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 33 - 99
Target Start/End: Original strand, 33245768 - 33245834
Alignment:
Q  33 taaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    ||||||||  |||||||||||||||||||  ||||||||||||| |||| ||| |||||||||||||    
T  33245768 taaaatttcccatcaaatttctttcatctgaatgtccttaaatttatcagttatattcataaaattt 33245834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 96
Target Start/End: Original strand, 47908135 - 47908198
Alignment:
Q  33 taaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaa 96  Q
    |||||||| ||||||||||| ||||||||  ||||||||||||| |||| ||| ||||||||||    
T  47908135 taaaatttcacatcaaatttttttcatctgaatgtccttaaatttatcagttatattcataaaa 47908198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 32 - 101
Target Start/End: Original strand, 23593697 - 23593760
Alignment:
Q  32 ataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    ||||||||| ||||||||||||||||||||  ||||||||||||      ||||||||||||||||||||    
T  23593697 ataaaatttcacatcaaatttctttcatctgaatgtccttaaat------tttacattcataaaatttct 23593760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 8392592 - 8392665
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    |||| |||||||| ||||||| ||| ||||||||  ||||||||||||| |||  ||||||||||||| |||||    
T  8392592 acaattaaaatttcacatcaactttatttcatctgaatgtccttaaatttatcggttacattcataaactttct 8392665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 140
Target Start/End: Complemental strand, 5374307 - 5374272
Alignment:
Q  105 attccagaaccccgaacgtgagaacaaaaacatctc 140  Q
    |||||||||||||||| |||||||||||||||||||    
T  5374307 attccagaaccccgaatgtgagaacaaaaacatctc 5374272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 8393323 - 8393266
Alignment:
Q  64 atgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccgaac 121  Q
    ||||||||||| ||||||  |||||||||||||||||| | |||| ||||||| ||||    
T  8393323 atgtccttaaagtcatcacatacattcataaaatttcttccattctagaacccagaac 8393266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 9662720 - 9662793
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    |||| |||||||| |||| |  ||| ||||||||  ||||||||||||| |||| ||| |||||||||||||||    
T  9662720 acaattaaaatttcacataatttttttttcatctgaatgtccttaaatttatcagttatattcataaaatttct 9662793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 110; Significance: 1e-55; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 17550815 - 17550694
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  17550815 agacttatgacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttacattcataaaatttcttccattccagaaccccg 17550716  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  17550715 aacgtgagaacaaaaacatctc 17550694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 11837575 - 11837454
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||    
T  11837575 agacttataacaaataaaattttacatcaaatttctttcatctagatgtcattaaattcatcatttacattcataaaatttcttccattccagaaccccg 11837476  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  11837475 aacgtgagaacaaaaacatctc 11837454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 11154607 - 11154486
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | |||||||||| |||    
T  11154607 agacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttacattcataaaatttcttcgattccagaacaccg 11154508  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  11154507 aacgtgagaacaaaaacatctc 11154486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 955573 - 955452
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||   ||||||||||||||    
T  955573 agacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttatattcataaaatttcttacattccagaaccccg 955474  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  955473 aacgtgagaacaaaaacatctc 955452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 4589809 - 4589688
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||    
T  4589809 agacttataacaaataaaattttacatcaaatttctttcttctggatgtccttaaattcatcatttacattcataaaatttcttccattccagaacctcg 4589710  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  4589709 aacgtgagaacaaaaacatctc 4589688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 16918484 - 16918605
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  16918484 agacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttacattcataaaatttcttccattccagaaccccg 16918583  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||| | ||||||||||||||||    
T  16918584 aacataagaacaaaaacatctc 16918605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 14104079 - 14104200
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||||||||||   ||||||||||||||    
T  14104079 agacttataacaaataaaattttacatcaaatttctttcatctggatgttcttaaattcatcatttactttcataaaatttctttcattccagaaccccg 14104178  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  14104179 aacgtgagaacaaaaacatctc 14104200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 21 - 140
Target Start/End: Original strand, 27782558 - 27782677
Alignment:
Q  21 acttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccgaa 120  Q
    |||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| | |||||||||||  |||    
T  27782558 acttataacaaataaaattttacatcaaatttctttcatctggatgttcttaaattcatcatttacattcataaaatttcttccattccagaaccatgaa 27782657  T
Q  121 cgtgagaacaaaaacatctc 140  Q
    ||| ||||||||||||||||    
T  27782658 cgtaagaacaaaaacatctc 27782677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 21861253 - 21861132
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| | | |||||| |||||||    
T  21861253 agacttataacaaataaaattatacatcaaatttctttcatctggatgtccttaaattcatcacttacattcataaaatttattccattccaaaaccccg 21861154  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||| ||||||||||||||||||    
T  21861153 aacttgagaacaaaaacatctc 21861132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 28 - 140
Target Start/End: Original strand, 23580374 - 23580486
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccgaacgtgaga 127  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| |||||||   |||||||||||| ||||||||||    
T  23580374 acaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttacatccatacaatttctttcattccagaaccctgaacgtgaga 23580473  T
Q  128 acaaaaacatctc 140  Q
    |||||||||||||    
T  23580474 acaaaaacatctc 23580486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 25109629 - 25109749
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||  | |||||||||||||||| | ||||||||||||      
T  25109629 agacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatca-atgcattcataaaatttcttccattccagaacccta 25109727  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  25109728 aacgtgagaacaaaaacatctc 25109749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 28578696 - 28578817
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||||| |||||| | ||| ||||||||||    
T  28578696 agacttataacaaataaaattttacatcaaatttttttcatctggatgtccttaaattcatcacttacattcataacatttcttccatttcagaaccccg 28578795  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    | | ||||||||||||||||||    
T  28578796 agcttgagaacaaaaacatctc 28578817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 27438486 - 27438607
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| |||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||| | ||||||  || |      
T  27438486 agacttataacaaataaaattttacatcaaatttctttcgtttggatgtccttaaattcatcatttacattcataaaatttcttccattccattactcaa 27438585  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    |||||||||||||||| |||||    
T  27438586 aacgtgagaacaaaaatatctc 27438607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 19 - 139
Target Start/End: Original strand, 24083211 - 24083331
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||   |||  |||| || |    
T  24083211 agacttataacaaataaaattttacatcaaatttctttcatctgaatgtccttaaattcatcacttacattcataaaatttctttcatttgagaatcctg 24083310  T
Q  119 aacgtgagaacaaaaacatct 139  Q
    ||| |||||||||||||||||    
T  24083311 aacatgagaacaaaaacatct 24083331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 5687486 - 5687559
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    |||| |||||||| ||||||||||||||||||||  ||||||||||||| |||| ||| |||||||||||||||    
T  5687486 acaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcagttatattcataaaatttct 5687559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 11153848 - 11153921
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    |||| |||||||| ||||||||||||||||||||  ||||||||||||| |||| ||| |||||||||||||||    
T  11153848 acaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcagttatattcataaaatttct 11153921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 28579443 - 28579370
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    |||| |||||||| ||||||||||||||||||||  ||||||||||||| |||| ||| |||||||||||||||    
T  28579443 acaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcagttatattcataaaatttct 28579370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 24083962 - 24083889
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    |||| |||||||| ||||||||||| |||||| |  ||||||||||||| |||| |||||||||||||||||||    
T  24083962 acaattaaaatttcacatcaaatttgtttcatttgaatgtccttaaatttatcaattacattcataaaatttct 24083889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 14104831 - 14104763
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaa 96  Q
    |||| |||||||| ||||||||||||||||||||  ||||||||||||| |||| ||| ||||||||||    
T  14104831 acaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcagttatattcataaaa 14104763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 16919012 - 16918941
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||| ||||||||||||||||||||  |||| |||||||| |||| ||| |||||||||||||    
T  16919012 acaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttatattcataaaattt 16918941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 27783316 - 27783245
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||| ||||||||||||||||| ||  ||||||||||||| |||| ||| |||||||||||||    
T  27783316 acaattaaaatttcacatcaaatttctttcaactgaatgtccttaaatttatcagttatattcataaaattt 27783245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 954802 - 954875
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    |||| |||||||| ||||||||||| ||| ||||  ||||||||||||| |||| ||| |||||||||||||||    
T  954802 acaattaaaatttcacatcaaatttattttatctgaatgtccttaaatttatcagttatattcataaaatttct 954875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 15288280 - 15288353
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    |||| |||||||| |||| ||||||||||||| |  |||| |||||||| |||| |||||||||||||||||||    
T  15288280 acaattaaaatttcacataaaatttctttcatttgaatgttcttaaatttatcagttacattcataaaatttct 15288353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 96
Target Start/End: Original strand, 11836816 - 11836884
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaa 96  Q
    |||| |||||||| ||||||||||||||||||||  |||| |||||||| |||| ||| ||||||||||    
T  11836816 acaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttatattcataaaa 11836884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 23573914 - 23573843
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||| ||||||||||||||||||||  | || |||||||| |||| ||| |||||||||||||    
T  23573914 acaattaaaatttcacatcaaatttctttcatctgaaagtacttaaatttatcagttatattcataaaattt 23573843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 25119100 - 25119045
Alignment:
Q  46 caaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    ||||||||||||||||  ||||||||||||| |||| ||| |||||||||||||||    
T  25119100 caaatttctttcatctgaatgtccttaaatttatcagttatattcataaaatttct 25119045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 27440749 - 27440678
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||| |||||||| |||||||||||  ||| ||||||||| |||| ||| |||||||||||||    
T  27440749 acaattaaaatttcacatcaaaattctttcatctgaatgcccttaaatttatcagttatattcataaaattt 27440678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 1090555 - 1090628
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    |||| ||||| || |||| ||||||||||||| |  ||||||||||||| |||| ||||||||||| |||||||    
T  1090555 acaattaaaaattcacattaaatttctttcatttgaatgtccttaaatttatcagttacattcatacaatttct 1090628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 99
Target Start/End: Original strand, 4589071 - 4589136
Alignment:
Q  34 aaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    ||||||| ||||||||||||||| ||||  |||| |||||||| |||| ||| ||| |||||||||    
T  4589071 aaaatttcacatcaaatttctttaatctgaatgttcttaaatttatcaattatatttataaaattt 4589136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 110; Significance: 1e-55; HSPs: 81)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 18410333 - 18410454
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  18410333 agacttatgacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttacattcataaaatttcttccattccagaaccccg 18410432  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  18410433 aacgtgagaacaaaaacatctc 18410454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 4233009 - 4232888
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||    
T  4233009 agacttataacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttcttccattccagaacctcg 4232910  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  4232909 aacgtgagaacaaaaacatctc 4232888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 16008905 - 16009026
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  16008905 agacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttacattcataaaatttcttccattccagaaccccg 16009004  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  16009005 aacgtgagaacaaaaacatctc 16009026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 41101788 - 41101909
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  41101788 agacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttacattcataaaatttcttccattccagaaccccg 41101887  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  41101888 aacgtgagaacaaaaacatctc 41101909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 44843127 - 44843006
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  44843127 agacttataacaaataaaattttacattaaatttctttcatctggatgtccttaaattcatcatttacattcataaaatttcttcaattccagaaccccg 44843028  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  44843027 aacgtgagaacaaaaacatctc 44843006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 19 - 139
Target Start/End: Complemental strand, 50548413 - 50548293
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  50548413 agacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttacattcataaaatttcttccattccagaaccccg 50548314  T
Q  119 aacgtgagaacaaaaacatct 139  Q
    |||||||||||||||||||||    
T  50548313 aacgtgagaacaaaaacatct 50548293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 37220027 - 37219906
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  37220027 agacttataacaaataaaattttacatcaaatttctttcatctgtatgtccttaaattcatcatttacattcataaaatttcttccattccagaaccccg 37219928  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  37219927 aacgtgagaacaaaaacatctc 37219906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 45053649 - 45053528
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  45053649 agacttataacaaataaaattttacatcaaatttctttcatctagatctccttaaattcatcatttacattcataaaatttcttccattccagaaccccg 45053550  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    |||||||||| |||||||||||    
T  45053549 aacgtgagaataaaaacatctc 45053528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 47912872 - 47912751
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  47912872 agacttataacaaataaaattttacatcaaatttctttcatctggatttccttaaattcatcatttacattcataaaatttcttccattccagaaccccg 47912773  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  47912772 aacgtgagaacaaaaacatctc 47912751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 21 - 140
Target Start/End: Original strand, 11121720 - 11121839
Alignment:
Q  21 acttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccgaa 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | |||| |||||||||||    
T  11121720 acttatgacaaataaaattttacatcaaatttctttcatctagatctccttaaattcatcatttacattcataaaatttcttccattctagaaccccgaa 11121819  T
Q  121 cgtgagaacaaaaacatctc 140  Q
    |||||||| |||||||||||    
T  11121820 cgtgagaataaaaacatctc 11121839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 19 - 137
Target Start/End: Original strand, 45170112 - 45170230
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||    
T  45170112 agacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttacattcataaaatttcttccattccagaaacccg 45170211  T
Q  119 aacgtgagaacaaaaacat 137  Q
    |||||||||||||||||||    
T  45170212 aacgtgagaacaaaaacat 45170230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 6175579 - 6175458
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||     
T  6175579 agacttataacaaataaaattttacattaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttcttccattccagaacccca 6175480  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    |||||||||| |||||||||||    
T  6175479 aacgtgagaataaaaacatctc 6175458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 30440221 - 30440100
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  30440221 agacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttacattcataaaatttcttccattccagaaccccg 30440122  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    || |||| ||||||||||||||    
T  30440121 aaagtgaaaacaaaaacatctc 30440100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 37785554 - 37785675
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||| | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  37785554 agacttgtaacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttacattcataaaatttcttccattccagaaccccg 37785653  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||| ||||||    
T  37785654 aacgtgagaacaaaagcatctc 37785675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 41698026 - 41697905
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| | |||||||||| |||    
T  41698026 agacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcgtttacattcataaaatttcttccattccagaactccg 41697927  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  41697926 aacgtgagaacaaaaacatctc 41697905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 19 - 139
Target Start/End: Original strand, 27321125 - 27321245
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||   ||||||||||||||    
T  27321125 agacttataacaaataaaattttacatcaaatttctttcatctgaatgtccttaaattcatcatttacattcataaaatttctttcattccagaaccccg 27321224  T
Q  119 aacgtgagaacaaaaacatct 139  Q
    |||||||||||||||||||||    
T  27321225 aacgtgagaacaaaaacatct 27321245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 23 - 140
Target Start/End: Original strand, 13213582 - 13213700
Alignment:
Q  23 ttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatca-tttacattcataaaatttctacaattccagaaccccgaac 121  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| | |||||||||||||||||    
T  13213582 ttataacaaataaaattttacatcaaatttctttcatctagatatccttaaattcatcattttacattcataaaatttcttccattccagaaccccgaac 13213681  T
Q  122 gtgagaacaaaaacatctc 140  Q
    |||||||||||||||||||    
T  13213682 gtgagaacaaaaacatctc 13213700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 16464036 - 16464157
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| | |||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| | |||| |||||||||    
T  16464036 agacttataaaaaataaaattttacatcaaatttctttcatctggatgtctttaaattcatcatttacattcataaaatttcttccattctagaaccccg 16464135  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  16464136 aacgtgagaacaaaaacatctc 16464157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 51722730 - 51722609
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||||| || |||||||||||||||| | ||||||||||||||    
T  51722730 agacttataacaaataaaattttacattaaatttctttcatctggatgtccttaaattcatcactttcattcataaaatttcttccattccagaaccccg 51722631  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  51722630 aacgtgagaacaaaaacatctc 51722609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 19 - 139
Target Start/End: Complemental strand, 30043417 - 30043297
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| | |||||||||||| |    
T  30043417 agacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttacattcatgaaatttcttccattccagaaccctg 30043318  T
Q  119 aacgtgagaacaaaaacatct 139  Q
    ||| |||||||||||||||||    
T  30043317 aacatgagaacaaaaacatct 30043297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 19 - 137
Target Start/End: Original strand, 23019905 - 23020023
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| ||||||||||||||||||||||||||||| || | ||||| ||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  23019905 agacttataacaaataaaattttacatcaaatttctttaatatggatgtacttaaattcatcatttacattcataaaatttcttccattccagaaccccg 23020004  T
Q  119 aacgtgagaacaaaaacat 137  Q
    |||||||||||||||||||    
T  23020005 aacgtgagaacaaaaacat 23020023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 19 - 139
Target Start/End: Original strand, 27126327 - 27126447
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| ||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||| | |||| |||||||||    
T  27126327 agacttataacaaataaaattttacatcaaatttttttcatctgaatgtccttaaattcatcatttacattcataaaatttcttccattctagaaccccg 27126426  T
Q  119 aacgtgagaacaaaaacatct 139  Q
    || ||||||||||||||||||    
T  27126427 aatgtgagaacaaaaacatct 27126447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 10827657 - 10827536
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||| | ||||||||||||||    
T  10827657 agacttataataaataaaattttacatcaaatttctttcatctagatgtccttaaattcatgacatacattcataaaatttcttctattccagaaccccg 10827558  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    |||||||||| ||||| |||||    
T  10827557 aacgtgagaaaaaaaatatctc 10827536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 23 - 140
Target Start/End: Original strand, 38696966 - 38697083
Alignment:
Q  23 ttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccgaacg 122  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| | |||||| ||| |||||||    
T  38696966 ttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcacttacattcataaaatttcttccattccataactccgaacg 38697065  T
Q  123 tgagaacaaaaacatctc 140  Q
    ||||||||||| ||||||    
T  38697066 tgagaacaaaagcatctc 38697083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 43338466 - 43338587
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||| | ||||||||||| ||||||||||||||||||| | |||||||||| |||    
T  43338466 agacttataacaaataaaattttacatcaaatttctttcatcttgatgttcataaattcatcacttacattcataaaatttcttccattccagaactccg 43338565  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    || |||||||||||||||||||    
T  43338566 aatgtgagaacaaaaacatctc 43338587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 23 - 137
Target Start/End: Complemental strand, 53778297 - 53778183
Alignment:
Q  23 ttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccgaacg 122  Q
    |||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| | ||| || |||||||||||    
T  53778297 ttataacaaataaaattttacattaaatttctttcatctggatgtccttaaattcatcacttacattcataaaatttcttccatttcaaaaccccgaacg 53778198  T
Q  123 tgagaacaaaaacat 137  Q
    |||||||||||||||    
T  53778197 tgagaacaaaaacat 53778183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 8851713 - 8851594
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| | |||| |||| |||     
T  8851713 agacttatgacaaataaaattttacatcaaatttctttcatctagatctccttaaattcatcatttacattcat-aaatttcttccattcaagaa-ccct 8851616  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    |||||||||| |||||||||||    
T  8851615 aacgtgagaataaaaacatctc 8851594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 37181900 - 37181779
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| ||||||||||||||||||||||||| |||||||| ||||||||| ||||||||| ||||||||||||||||||  | ||| || |||||||    
T  37181900 agacttataacaaataaaattttacatcaaatttttttcatctggatgtccttgaattcatcacttacattcataaaatttcgtccatttcaaaaccccg 37181801  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  37181800 aacgtgagaacaaaaacatctc 37181779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 38235625 - 38235745
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| |||||| ||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||| |||| | ||||||||| ||||    
T  38235625 agacttataacaaatgaaattttacattaaatttctttcatctggatgtccttaaattcatcacttacattcataaaagttcttccattccagaa-cccg 38235723  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  38235724 aacgtgagaacaaaaacatctc 38235745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 21 - 140
Target Start/End: Complemental strand, 27325587 - 27325468
Alignment:
Q  21 acttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccgaa 120  Q
    |||||| | |||| |||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| | |||||| ||||| |||    
T  27325587 acttataaaaaatcaaattttaaatcaaatttctctcatctggatgtccttaaattcatcatttacattcataaaatttcttccattccataaccctgaa 27325488  T
Q  121 cgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||    
T  27325487 cgtgagaacaaaaacatctc 27325468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 21 - 140
Target Start/End: Complemental strand, 27331824 - 27331705
Alignment:
Q  21 acttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccgaa 120  Q
    |||||| | |||| |||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| | |||||| ||||| |||    
T  27331824 acttataaaaaatcaaattttaaatcaaatttctctcatctggatgtccttaaattcatcatttacattcataaaatttcttccattccataaccctgaa 27331725  T
Q  121 cgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||    
T  27331724 cgtgagaacaaaaacatctc 27331705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 20 - 140
Target Start/End: Original strand, 55411315 - 55411431
Alignment:
Q  20 gacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccga 119  Q
    ||||||| ||||||||||||||||||||||||||||||||    |||||||||||||||||| ||||||||||||||||||  |||||||| ||| ||||    
T  55411315 gacttataacaaataaaattttacatcaaatttctttcat----atgtccttaaattcatcacttacattcataaaatttcatcaattccaaaactccga 55411410  T
Q  120 acgtgagaacaaaaacatctc 140  Q
    |||||||||||||||||||||    
T  55411411 acgtgagaacaaaaacatctc 55411431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 30363610 - 30363489
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| ||||||||||||||||||||||||| |||||||| |||||||||| |||||||| ||||||||||||||| ||| | |||| | |||||||    
T  30363610 agacttataacaaataaaattttacatcaaatttttttcatctggatgtccttagattcatcaattacattcataaaatgtcttctattctaaaaccccg 30363511  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    | ||||||||||||||||||||    
T  30363510 agcgtgagaacaaaaacatctc 30363489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 19 - 139
Target Start/End: Complemental strand, 22428869 - 22428749
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||| | |||||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||||   ||| ||||||||||    
T  22428869 agacttgtaacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcacttgcattcataaaatttcttacatttcagaaccccg 22428770  T
Q  119 aacgtgagaacaaaaacatct 139  Q
    ||  |||||||||||||||||    
T  22428769 aatctgagaacaaaaacatct 22428749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 19 - 101
Target Start/End: Complemental strand, 15084493 - 15084411
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  15084493 agacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttacattcataaaatttct 15084411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 40423811 - 40423927
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| ||||||||||||||||||| | |||||||||||| ||||||||||||||| ||| ||||||||||||||||||     ||||| |||||||    
T  40423811 agacttataacaaataaaattttacatcgagtttctttcatctggatgtccttaaattcctcacttacattcataaaatttc-----ttccataaccccg 40423905  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    |||||||||||||||| |||||    
T  40423906 aacgtgagaacaaaaatatctc 40423927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 3892618 - 3892493
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttcttt----catctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaac 114  Q
    |||||||| ||||||||||||||||||||||||| |||    ||||| ||| ||||||||||||||| |||||||||||||||||||   |||| | |||    
T  3892618 agacttataacaaataaaattttacatcaaatttttttttttcatctggatatccttaaattcatcacttacattcataaaatttctttcattctaaaac 3892519  T
Q  115 cccgaacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||||||    
T  3892518 cccgaacgtgagaacaaaaacatctc 3892493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 28 - 140
Target Start/End: Original strand, 22604994 - 22605106
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccgaacgtgaga 127  Q
    |||||| ||||||||||||||||||||||||||   ||||||||||||||||||||||| |||||||||||||| | |||| |||||||| ||| |||||    
T  22604994 acaaatgaaattttacatcaaatttctttcatccgaatgtccttaaattcatcatttactttcataaaatttcttccattctagaaccccaaacatgaga 22605093  T
Q  128 acaaaaacatctc 140  Q
    ||||||| |||||    
T  22605094 acaaaaatatctc 22605106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 88
Target Start/End: Original strand, 40906280 - 40906349
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacat 88  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  40906280 agacttataacaaataaaattttacatcaaatttctttcatctggatttccttaaattcatcatttacat 40906349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 22 - 115
Target Start/End: Complemental strand, 22732549 - 22732456
Alignment:
Q  22 cttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaacc 115  Q
    ||||| |||| |||||||| ||||||| |||||||||| ||||||||||||||| ||||  ||||||||||||||||||| |||||||| ||||    
T  22732549 cttataacaattaaaatttcacatcaattttctttcatttagatgtccttaaatccatcggttacattcataaaatttcttcaattccataacc 22732456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 55412092 - 55412019
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    |||| |||||||| ||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||    
T  55412092 acaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcatttacattcataaaatttct 55412019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 53777536 - 53777609
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    |||| |||||||| ||||||||||||||||||||  |||||||||| || ||||||||||||||||||||||||    
T  53777536 acaattaaaatttcacatcaaatttctttcatctgaatgtccttaagtttatcatttacattcataaaatttct 53777609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 30 - 114
Target Start/End: Original strand, 42826125 - 42826209
Alignment:
Q  30 aaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaac 114  Q
    ||||||||||||| || |||||||||||||||  ||||| |||||||||||| ||||||||||||||| ||| | ||||||||||    
T  42826125 aaataaaattttatattaaatttctttcatctgaatgtctttaaattcatcacttacattcataaaatatcttccattccagaac 42826209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 16009668 - 16009597
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||||||||||||||||||||||||  ||||||||||||| |||| ||| |||||||||||||    
T  16009668 acaattaaaattttacatcaaatttctttcatctgaatgtccttaaatttatcagttatattcataaaattt 16009597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 31312799 - 31312872
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    |||| |||||||| ||||||||||||||||||||  ||||||||||||| |||| ||| |||||||||||||||    
T  31312799 acaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcagttatattcataaaatttct 31312872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 37181162 - 37181235
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    |||| |||||||| ||||||||||| ||||||||  ||||||||||||| |||| |||||||||||||||||||    
T  37181162 acaattaaaatttcacatcaaatttttttcatctgaatgtccttaaatttatcagttacattcataaaatttct 37181235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 51721977 - 51722050
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    |||| |||||||| |||| |||||||||||||||  ||||||||||||| |||| |||||||||||||||||||    
T  51721977 acaattaaaatttcacattaaatttctttcatctgaatgtccttaaatttatcagttacattcataaaatttct 51722050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 33 - 101
Target Start/End: Complemental strand, 18762807 - 18762739
Alignment:
Q  33 taaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    |||||||| ||||||||||||||||||||  ||||||||||||| |||| ||| |||||||||||||||    
T  18762807 taaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcagttatattcataaaatttct 18762739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 23 - 99
Target Start/End: Complemental strand, 22605746 - 22605670
Alignment:
Q  23 ttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||| |||||||| ||||||||||||||||||||  ||||||||||||| |||| ||| |||||||||||||    
T  22605746 ttataacaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcagttatattcataaaattt 22605670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 2218870 - 2218799
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||| ||||||||||||||||||||  ||||||||||||| |||| ||| |||||||||||||    
T  2218870 acaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcagttatattcataaaattt 2218799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 16464798 - 16464727
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||| ||||||||||||||||||||  ||||||||||||| |||| ||| |||||||||||||    
T  16464798 acaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcagttatattcataaaattt 16464727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 18411095 - 18411024
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||| ||||||||||||||||||||  ||||||||||||| |||| ||| |||||||||||||    
T  18411095 acaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcagttatattcataaaattt 18411024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 27127057 - 27126986
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||| ||||||||||||||||||||  ||||||||||||| |||| ||| |||||||||||||    
T  27127057 acaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcagttatattcataaaattt 27126986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 27324854 - 27324925
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||| ||||||||||||||||||||  ||||||||||||| |||| ||| |||||||||||||    
T  27324854 acaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcagttatattcataaaattt 27324925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 30042659 - 30042730
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||| ||||||||||||||||||||  ||||||||||||| |||| ||| |||||||||||||    
T  30042659 acaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcagttatattcataaaattt 30042730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 30362771 - 30362842
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||||||||||||||||||||||||  ||||||||| ||| |||| |||||||||||| ||||    
T  30362771 acaattaaaattttacatcaaatttctttcatctgaatgtccttacatttatcagttacattcataacattt 30362842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 44842366 - 44842437
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||| ||||||||||||||||||||  ||||||||||||| |||| ||| |||||||||||||    
T  44842366 acaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcagttatattcataaaattt 44842437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 50610318 - 50610247
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||| ||||||||||||||||||||  ||||||||||||| |||| ||| |||||||||||||    
T  50610318 acaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcaattatattcataaaattt 50610247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 99
Target Start/End: Complemental strand, 40907012 - 40906946
Alignment:
Q  33 taaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||||||| ||||||||||||||||||||  ||||||||||||| |||| ||| |||||||||||||    
T  40907012 taaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcagttatattcataaaattt 40906946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 38236398 - 38236325
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    |||| |||||||| ||||||||||||||||||||  ||||||||||||| |||  ||| |||||||||||||||    
T  38236398 acaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatctgttatattcataaaatttct 38236325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 4232093 - 4232164
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| ||||| || ||||||||||||||||||||  ||||||||||||| |||| ||| |||||||||||||    
T  4232093 acaattaaaagttcacatcaaatttctttcatctgaatgtccttaaatttatcagttatattcataaaattt 4232164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 11122481 - 11122410
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||| | ||||||||||||||||||  ||||||||||||| |||| ||| |||||||||||||    
T  11122481 acaattaaaatttcatatcaaatttctttcatctgaatgtccttaaatttatcagttatattcataaaattt 11122410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 27331091 - 27331162
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||| ||||||||||||||||||||  |||| |||||||| |||| ||| |||||||||||||    
T  27331091 acaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttatattcataaaattt 27331162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 30439490 - 30439561
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||| | ||||||||||||||||||  ||||||||||||| |||| ||| |||||||||||||    
T  30439490 acaattaaaatttcatatcaaatttctttcatctgaatgtccttaaatttatcagttatattcataaaattt 30439561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 37219370 - 37219441
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||| ||||||||||||||||||||  ||||| ||||||| |||| ||| |||||||||||||    
T  37219370 acaattaaaatttcacatcaaatttctttcatctgaatgtcattaaatttatcagttatattcataaaattt 37219441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 43339236 - 43339165
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||| ||||||||||||||||||||  || |||||||||| |||| ||| |||||||||||||    
T  43339236 acaattaaaatttcacatcaaatttctttcatctgaatatccttaaatttatcagttatattcataaaattt 43339165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 90 - 140
Target Start/End: Original strand, 2218179 - 2218229
Alignment:
Q  90 cataaaatttctacaattccagaaccccgaacgtgagaacaaaaacatctc 140  Q
    |||||||||||| | |||| |||||||||||||||||||||||||||||||    
T  2218179 cataaaatttcttccattctagaaccccgaacgtgagaacaaaaacatctc 2218229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 33 - 99
Target Start/End: Original strand, 47912133 - 47912199
Alignment:
Q  33 taaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||||||| ||||||||||||||||||||  ||||||||||||| |||| ||| |||||||| ||||    
T  47912133 taaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcagttatattcataagattt 47912199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 22731642 - 22731715
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    |||| |||||||| |||| |||||||||| |||||| ||||||||||| ||||  ||||||||||| |||||||    
T  22731642 acaattaaaatttcacattaaatttcttttatctaggtgtccttaaatccatctgttacattcatagaatttct 22731715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 42826867 - 42826794
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    |||| |||||||| |||| ||||||| ||||| |  ||||||||||||| |||| |||||||||||||||||||    
T  42826867 acaattaaaatttcacattaaatttccttcatatgaatgtccttaaatttatcagttacattcataaaatttct 42826794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 41102552 - 41102481
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||| ||||||||||| ||||||||  ||||||||||||| |||  ||| |||||||||||||    
T  41102552 acaattaaaatttcacatcaaatttgtttcatctgaatgtccttaaatttatcggttatattcataaaattt 41102481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 41697264 - 41697335
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||| ||||||||||||||||||||  ||||  ||||||| |||| ||| |||||||||||||    
T  41697264 acaattaaaatttcacatcaaatttctttcatctgaatgtatttaaatttatcagttatattcataaaattt 41697335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 45052887 - 45052958
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||| |||||||||||||||| |||  ||||||||||||| |||  ||| |||||||||||||    
T  45052887 acaattaaaatttcacatcaaatttctttcttctgaatgtccttaaatttatctgttatattcataaaattt 45052958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 45170870 - 45170799
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||| ||||||||||||||||||||  || |||||||||| || | ||| |||||||||||||    
T  45170870 acaattaaaatttcacatcaaatttctttcatctgaatttccttaaatttattagttatattcataaaattt 45170799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 50547651 - 50547722
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||| ||||||||||||||||||||  ||||||||||||| || | ||| |||| ||||||||    
T  50547651 acaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttataagttatattcctaaaattt 50547722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 52746485 - 52746556
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||| ||||||||||| |||||| |  ||||||||||||| |||| ||| |||||||||||||    
T  52746485 acaattaaaatttcacatcaaatttttttcatatgaatgtccttaaatttatcagttatattcataaaattt 52746556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 43 - 101
Target Start/End: Original strand, 10826917 - 10826975
Alignment:
Q  43 catcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    |||||||||||||| ||||  || |||||||||| |||| |||||||||||||||||||    
T  10826917 catcaaatttcttttatctgaatatccttaaatttatcagttacattcataaaatttct 10826975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 38697732 - 38697659
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    |||| |||||||| ||||||||||||||||||||  ||||  ||||||| |||| | | |||||||||||||||    
T  38697732 acaattaaaatttcacatcaaatttctttcatctgaatgtatttaaatttatcagtcatattcataaaatttct 38697659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 76
Target Start/End: Complemental strand, 37786291 - 37786243
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaatt 76  Q
    |||| |||||||| ||||||||||||||||||||  |||||||||||||    
T  37786291 acaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatt 37786243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 8850952 - 8851023
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||| | |||||| || ||||||||  ||||||||||||| |||| ||| |||||||||||||    
T  8850952 acaattaaaatttcatatcaaaattttttcatctgaatgtccttaaatttatcagttatattcataaaattt 8851023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 95
Target Start/End: Complemental strand, 23020666 - 23020599
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaa 95  Q
    |||| |||||||| | |||||||||| |||||||  ||||||||||||| |||| ||| |||||||||    
T  23020666 acaattaaaatttcatatcaaatttcattcatctgaatgtccttaaatttatcagttatattcataaa 23020599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 106; Significance: 4e-53; HSPs: 59)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 25583534 - 25583413
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  25583534 agacttataacaaataaaattttacataaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttcttccattccagaaccccg 25583435  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  25583434 aacgtgagaacaaaaacatctc 25583413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 276872 - 276993
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||    
T  276872 agacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttacattcataaattttcttccattccagaaccccg 276971  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  276972 aacgtgagaacaaaaacatctc 276993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 638977 - 638856
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||    
T  638977 agacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttacattcataaattttcttccattccagaaccccg 638878  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  638877 aacgtgagaacaaaaacatctc 638856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 824783 - 824662
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||    
T  824783 agacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttacattcataaattttcttccattccagaaccccg 824684  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  824683 aacgtgagaacaaaaacatctc 824662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 3705063 - 3704942
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||   ||||||||||||||    
T  3705063 agacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttacattcataaaatttctttcattccagaaccccg 3704964  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  3704963 aacgtgagaacaaaaacatctc 3704942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 3850167 - 3850288
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||    
T  3850167 agacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcacttacattcataaaatttcttccattccagaaccccg 3850266  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  3850267 aacgtgagaacaaaaacatctc 3850288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 19 - 138
Target Start/End: Complemental strand, 17948426 - 17948307
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||    
T  17948426 agacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcgtcatttacattcataaaatttcttccattccagaaccccg 17948327  T
Q  119 aacgtgagaacaaaaacatc 138  Q
    ||||||||||||||||||||    
T  17948326 aacgtgagaacaaaaacatc 17948307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 19 - 137
Target Start/End: Original strand, 16096049 - 16096167
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||| | ||||||||||||||    
T  16096049 agacttatgacaaataaaattttacatcaaatttctttcatctggatgtgcttaaattcatcatttacatttataaaatttcttccattccagaaccccg 16096148  T
Q  119 aacgtgagaacaaaaacat 137  Q
    |||||||||||||||||||    
T  16096149 aacgtgagaacaaaaacat 16096167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 15883354 - 15883233
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| | |||| |||||||||    
T  15883354 agacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttacattcatagaatttcttccattctagaaccccg 15883255  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  15883254 aacgtgagaacaaaaacatctc 15883233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 23347096 - 23346975
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| | ||||||||| ||||    
T  23347096 agacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttacattcataaagtttcttccattccagaatcccg 23346997  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  23346996 aacgtgagaacaaaaacatctc 23346975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 27912534 - 27912655
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| | |||| |||||||||    
T  27912534 agacttatgacaaataaaattttacatcaaatttatttcatctagatatccttaaattcatcatttacattcataaaatttcttccattcaagaaccccg 27912633  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    |||||||||| |||||||||||    
T  27912634 aacgtgagaataaaaacatctc 27912655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 27958953 - 27959074
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| | |||| |||||||||    
T  27958953 agacttatgacaaataaaattttacatcaaatttatttcatctagatatccttaaattcatcatttacattcataaaatttcttccattcaagaaccccg 27959052  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    |||||||||| |||||||||||    
T  27959053 aacgtgagaataaaaacatctc 27959074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 21 - 140
Target Start/End: Complemental strand, 2082205 - 2082086
Alignment:
Q  21 acttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccgaa 120  Q
    |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  2082205 acttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttacattcataaaatttcttccattccagaaccccgaa 2082106  T
Q  121 cgtgagaacaaaaacatctc 140  Q
    || ||||||| |||||||||    
T  2082105 cgcgagaacataaacatctc 2082086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 19 - 137
Target Start/End: Complemental strand, 13141238 - 13141120
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||| | ||||||||||||||    
T  13141238 agacttataacaaataaaattttacatcaaatttctttcatctggatgtacttaaattcatcacttacattcataaaatttcttctattccagaaccccg 13141139  T
Q  119 aacgtgagaacaaaaacat 137  Q
    |||||||||||||||||||    
T  13141138 aacgtgagaacaaaaacat 13141120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 4622676 - 4622555
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    ||||| || |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| | |||| |||||||||    
T  4622676 agactgataacaaataaaattttacatcaaatttctttcatctggatgttcttaaattcatcatttacattcataaaatttcttccattctagaaccccg 4622577  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  4622576 aacgtgagaacaaaaacatctc 4622555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 6093464 - 6093585
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| ||||||||||||||||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||| | |||||||||||| |    
T  6093464 agacttataacaaataaaattttacatcaaatttcttttatttggatgtccttaaattcatcatttacattcataaaatttcttccattccagaacccag 6093563  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  6093564 aacgtgagaacaaaaacatctc 6093585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 18955384 - 18955505
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| ||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||||||||| | ||||||||||||||    
T  18955384 agacttataacaaataaaattttacatcaaatttctttcatctgaatgtccttgaattcatcatttacattcataaaatttcttctattccagaaccccg 18955483  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    || |||||||||||||||||||    
T  18955484 aaagtgagaacaaaaacatctc 18955505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 20 - 137
Target Start/End: Complemental strand, 28085832 - 28085715
Alignment:
Q  20 gacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccga 119  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| | |||||| ||||||||    
T  28085832 gacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcacttacattcataaaatttcttccattccaaaaccccga 28085733  T
Q  120 acgtgagaacaaaaacat 137  Q
    ||||||||||||||||||    
T  28085732 acgtgagaacaaaaacat 28085715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 23 - 140
Target Start/End: Original strand, 41545116 - 41545233
Alignment:
Q  23 ttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccgaacg 122  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||  ||||||    
T  41545116 ttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttacattcataaaatttcttccattccagaactacgaacg 41545215  T
Q  123 tgagaacaaaaacatctc 140  Q
    ||||||||||||||||||    
T  41545216 tgagaacaaaaacatctc 41545233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 19 - 139
Target Start/End: Original strand, 42735734 - 42735854
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| ||| |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||| | ||||||||||||||    
T  42735734 agacttataacagataaaattttacatcaaatttctttcatctggatgtccttaaattcatcacttacatttataaaatttcttccattccagaaccccg 42735833  T
Q  119 aacgtgagaacaaaaacatct 139  Q
    |||||||||||||||||||||    
T  42735834 aacgtgagaacaaaaacatct 42735854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 29 - 140
Target Start/End: Original strand, 39858160 - 39858271
Alignment:
Q  29 caaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccgaacgtgagaa 128  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| | ||| ||||||||||||||||||||    
T  39858160 caaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcacttacattcataaaatttcttccatttcagaaccccgaacgtgagaa 39858259  T
Q  129 caaaaacatctc 140  Q
    ||||||||||||    
T  39858260 caaaaacatctc 39858271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 30556621 - 30556501
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||| | |||| |||||||||    
T  30556621 agacttataacaaataaaattttacatcaaattt-tttcatctggatgtccttaaattcatcacttacattcataaaatttcttccattctagaaccccg 30556523  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  30556522 aacgtgagaacaaaaacatctc 30556501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 19 - 137
Target Start/End: Complemental strand, 43695100 - 43694982
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||| | |||  |||||||||    
T  43695100 agacttataacaaataaaattttacatcaaatttttttcatctggatgtccttaaattcatcacttacattcataaaatttcttccattatagaaccccg 43695001  T
Q  119 aacgtgagaacaaaaacat 137  Q
    |||||||||||||||||||    
T  43695000 aacgtgagaacaaaaacat 43694982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 28 - 140
Target Start/End: Complemental strand, 40304299 - 40304187
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccgaacgtgaga 127  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||   |||| ||||||| ||||||||||    
T  40304299 acaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcacttacattcataaaatttctttcattctagaaccctgaacgtgaga 40304200  T
Q  128 acaaaaacatctc 140  Q
    |||||||||||||    
T  40304199 acaaaaacatctc 40304187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 19 - 134
Target Start/End: Original strand, 44256233 - 44256348
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |  ||| ||||||||     
T  44256233 agacttataacaaataaaattttacatcaaatttttttcatctagatgtccttaaattcatcatttacattcataaaatttcttcctttctagaacccca 44256332  T
Q  119 aacgtgagaacaaaaa 134  Q
    |||||||||| |||||    
T  44256333 aacgtgagaataaaaa 44256348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 20 - 137
Target Start/End: Original strand, 30105881 - 30105998
Alignment:
Q  20 gacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccga 119  Q
    ||||||| ||||||||||||||||||||||||||||| ||||  |||||||||||||||||| |||||||||||||||||||   |||||| ||||||||    
T  30105881 gacttataacaaataaaattttacatcaaatttctttaatctgaatgtccttaaattcatcacttacattcataaaatttctttcattccaaaaccccga 30105980  T
Q  120 acgtgagaacaaaaacat 137  Q
    ||||||||||||||||||    
T  30105981 acgtgagaacaaaaacat 30105998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 21 - 140
Target Start/End: Original strand, 42645458 - 42645577
Alignment:
Q  21 acttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccgaa 120  Q
    |||||| ||||||||||||||||| |||||||  ||||||| ||||||||||||||||||| ||||||||||||||||||| | |||| | |||||||||    
T  42645458 acttataacaaataaaattttacagcaaattttcttcatctggatgtccttaaattcatcacttacattcataaaatttcttccattctaaaaccccgaa 42645557  T
Q  121 cgtgagaacaaaaacatctc 140  Q
    | ||||||||||||||||||    
T  42645558 cttgagaacaaaaacatctc 42645577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 98
Target Start/End: Complemental strand, 38576979 - 38576901
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatt 98  Q
    |||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  38576979 agacttataacaaataaa-ttttacatcaaatttctttcatctcgatgtccttaaattcatcacttacattcataaaatt 38576901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 137
Target Start/End: Complemental strand, 45409147 - 45409031
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| || |||||||||||||||||| ||| |||||| | |||||||  |||| ||||| ||||||||||||||||||| | |||| | |||||||    
T  45409147 agacttataactaataaaattttacatcaacttt-tttcatttggatgtccaaaaat-catcacttacattcataaaatttcttccattctaaaaccccg 45409050  T
Q  119 aacgtgagaacaaaaacat 137  Q
    |||||||||||||||||||    
T  45409049 aacgtgagaacaaaaacat 45409031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 22 - 115
Target Start/End: Original strand, 5587003 - 5587096
Alignment:
Q  22 cttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaacc 115  Q
    ||||| |||| |||||||| ||||||| |||||||||| ||||||||||||||| ||||  ||||||||||||||||||| |||||||| ||||    
T  5587003 cttataacaattaaaatttcacatcaattttctttcatttagatgtccttaaatccatcggttacattcataaaatttcttcaattccataacc 5587096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 42646227 - 42646154
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    |||| |||||||| ||||||||||||||||||||  ||||||||||||| |||| |||||||||||||||||||    
T  42646227 acaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcagttacattcataaaatttct 42646154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 45408394 - 45408467
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    |||| |||||||| ||||||||||||||||||||  ||||||||||||| |||| |||||||||||||||||||    
T  45408394 acaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcagttacattcataaaatttct 45408467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 13140477 - 13140548
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||| |||||||||||||||||||| |||||||||||||| |||| ||| |||||||||||||    
T  13140477 acaattaaaatttcacatcaaatttctttcatctggatgtccttaaatttatcagttatattcataaaattt 13140548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 30555851 - 30555924
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    |||| |||||||| ||||||||||||||||||||  ||||||||||||| |||| ||| |||||||||||||||    
T  30555851 acaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcagttatattcataaaatttct 30555924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 39858890 - 39858817
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    |||| |||||||| ||||||||||||||||||||  ||||||||||||| |||| ||| |||||||||||||||    
T  39858890 acaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcagttatattcataaaatttct 39858817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 43694329 - 43694402
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    |||| |||||||| ||||||||||||||||||||  ||||||||||||| |||| ||| |||||||||||||||    
T  43694329 acaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcagttatattcataaaatttct 43694402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 277636 - 277565
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||| ||||||||||||||||||||  ||||||||||||| |||| ||| |||||||||||||    
T  277636 acaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcagttatattcataaaattt 277565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 638213 - 638284
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||| ||||||||||||||||||||  ||||||||||||| |||| ||| |||||||||||||    
T  638213 acaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcagttatattcataaaattt 638284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 824019 - 824090
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||| ||||||||||||||||||||  ||||||||||||| |||| ||| |||||||||||||    
T  824019 acaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcagttatattcataaaattt 824090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 18956353 - 18956282
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||| ||||||||||||||||||||  ||||||||||||| |||| ||| |||||||||||||    
T  18956353 acaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcagttatattcataaaattt 18956282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 26950015 - 26950086
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||| ||||||||||||||||||||  ||||||||||||| |||| ||| |||||||||||||    
T  26950015 acaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcagttatattcataaaattt 26950086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 38060410 - 38060481
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||| ||||||||||||||||||||  ||||||||||||| |||| ||| |||||||||||||    
T  38060410 acaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcagttatattcataaaattt 38060481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 40303533 - 40303604
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||| ||||||||||||||||||||  ||||||||||||| |||| ||| |||||||||||||    
T  40303533 acaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcagttatattcataaaattt 40303604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 98
Target Start/End: Complemental strand, 41545739 - 41545669
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatt 98  Q
    |||| |||||||| ||||||||||||||||||||  ||||||||||||| |||| ||| ||||||||||||    
T  41545739 acaattaaaatttcacatcaaatttctttcatctgaatgtccttaaattaatcagttatattcataaaatt 41545669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 6095705 - 6095632
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    |||| |||||||||| ||||||||||||||||||  ||||||||||||| |||| ||| ||||||| |||||||    
T  6095705 acaattaaaattttagatcaaatttctttcatctgaatgtccttaaatttatcagttatattcatacaatttct 6095632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 23346326 - 23346403
Alignment:
Q  22 cttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    ||||| |||| |||||||| ||||||||||||||||| ||  ||||||||||||| |||| ||| |||||||||||||    
T  23346326 cttataacaattaaaatttcacatcaaatttctttcacctgaatgtccttaaatttatcagttatattcataaaattt 23346403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 30111637 - 30111564
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    |||| |||||||| ||||||||||||||| ||||  |||||||||| || |||||||| |||||||||||||||    
T  30111637 acaattaaaatttcacatcaaatttctttgatctgaatgtccttaagtttatcatttatattcataaaatttct 30111564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 97
Target Start/End: Complemental strand, 40617398 - 40617329
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaat 97  Q
    |||| |||||||| | ||||||||||||||||||  ||||||||||||| |||| |||||||||||||||    
T  40617398 acaattaaaatttcaaatcaaatttctttcatctgaatgtccttaaatttatcagttacattcataaaat 40617329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 42736486 - 42736413
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    |||| |||||||| ||||||||||||||||||||  ||||| ||||||| |||| ||| |||||||||||||||    
T  42736486 acaattaaaatttcacatcaaatttctttcatctgaatgtctttaaatttatcagttatattcataaaatttct 42736413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 15882603 - 15882674
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||| |||||||||||| |||||||  ||||||||||||| |||| ||| |||||||||||||    
T  15882603 acaattaaaatttcacatcaaatttcattcatctgaatgtccttaaatttatcagttaaattcataaaattt 15882674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 27913296 - 27913225
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||| | ||||||||||||||||||  ||||||||||||| |||| ||| |||||||||||||    
T  27913296 acaattaaaatttcatatcaaatttctttcatctgaatgtccttaaatttatcagttatattcataaaattt 27913225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 27959715 - 27959644
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||| | ||||||||||||||||||  ||||||||||||| |||| ||| |||||||||||||    
T  27959715 acaattaaaatttcatatcaaatttctttcatctgaatgtccttaaatttatcagttatattcataaaattt 27959644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 44256994 - 44256923
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||| ||||||||||||||||||||  ||||||||||||| |||| ||| | |||||||||||    
T  44256994 acaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcagttatactcataaaattt 44256923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 5587910 - 5587837
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    |||| |||||||| |||| |||||||||| |||||| ||||||||||| ||||  ||||||||||| |||||||    
T  5587910 acaattaaaatttcacattaaatttcttttatctaggtgtccttaaatccatctgttacattcatagaatttct 5587837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 18088700 - 18088773
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    |||| |||||||| |||||||||||||||||| |  || ||||||  || ||||||||||||||||||||||||    
T  18088700 acaattaaaatttcacatcaaatttctttcatatgaatatccttaggtttatcatttacattcataaaatttct 18088773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 101
Target Start/End: Complemental strand, 3850923 - 3850855
Alignment:
Q  33 taaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    |||||||| ||||||||||| ||||||||  | ||||||||||| |||| ||| |||||||||||||||    
T  3850923 taaaatttcacatcaaatttttttcatctgaaagtccttaaatttatcagttatattcataaaatttct 3850855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 58
Target Start/End: Complemental strand, 18089364 - 18089325
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttca 58  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  18089364 agacttataacaaataaaattttacatcaaatttctttca 18089325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 36192331 - 36192258
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    |||| |||||||| |||||||||||||||||| |  || |||||||||| |||  ||| |||||||||||||||    
T  36192331 acaattaaaatttcacatcaaatttctttcatatgaatatccttaaatttatcggttatattcataaaatttct 36192258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 140
Target Start/End: Complemental strand, 18089323 - 18089270
Alignment:
Q  87 attcataaaatttctacaattccagaaccccgaacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||| | |||||| ||| || ||| ||||||||||||||||||    
T  18089323 attcataaaatttcttctattccaaaactccaaacatgagaacaaaaacatctc 18089270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 106; Significance: 4e-53; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 42612176 - 42612055
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  42612176 agacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttacattcataaaatttcttccattccagaaccccg 42612077  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  42612076 aacgtgagaacaaaaacatctc 42612055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 12499492 - 12499613
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  12499492 agacttataacaaataaaattttacatcaaatttatttcatctcgatgtccttaaattcatcatttacattcataaaatttcttccattccagaaccccg 12499591  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  12499592 aacgtgagaacaaaaacatctc 12499613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 21 - 140
Target Start/End: Complemental strand, 30130875 - 30130756
Alignment:
Q  21 acttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccgaa 120  Q
    |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||    
T  30130875 acttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttatattcataaaatttcttccattccagaaccccgaa 30130776  T
Q  121 cgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||    
T  30130775 cgtgagaacaaaaacatctc 30130756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 745529 - 745408
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| | |||||||||||| |    
T  745529 agacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttacattcataaattttcttccattccagaaccctg 745430  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  745429 aacgtgagaacaaaaacatctc 745408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 9591892 - 9592013
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| | |||||||||||| |    
T  9591892 agacttataacaaataaaattttacatcaaatttctttcatctagatgttgttaaattcatcatttacattcataaaatttcttccattccagaaccctg 9591991  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  9591992 aacgtgagaacaaaaacatctc 9592013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 19665045 - 19665166
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| | ||| ||||||||||    
T  19665045 agacttataacaaataaaattttacatcaaatttctttcatctggatgtctttaaattcatcatttacattcataaaatttcttccattacagaaccccg 19665144  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  19665145 aacgtgagaacaaaaacatctc 19665166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 20546111 - 20545991
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  20546111 agacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttacattcataaaatttcttccattccagaaccccg 20546012  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    |||||||| |||||||||||||    
T  20546011 aacgtgag-acaaaaacatctc 20545991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 27020054 - 27019933
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| | | |||| |||||||||    
T  27020054 agacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttacattcataaatttttttccattctagaaccccg 27019955  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  27019954 aacgtgagaacaaaaacatctc 27019933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 21 - 140
Target Start/End: Complemental strand, 13305383 - 13305264
Alignment:
Q  21 acttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccgaa 120  Q
    |||||| |||||| ||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||    
T  13305383 acttataacaaattaaattttacatcaaatttctttcatttggatgtccttaaattcatcacttacattcataaaatttcttccattccagaaccccgaa 13305284  T
Q  121 cgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||    
T  13305283 cgtgagaacaaaaacatctc 13305264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 19 - 137
Target Start/End: Original strand, 37270520 - 37270638
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||    
T  37270520 agacttataacaaataaaattttatatcaaatttctttcatctggatgtccttaaattcatcacttacattcataaaatttcttccattccagaaccccg 37270619  T
Q  119 aacgtgagaacaaaaacat 137  Q
    ||| |||||||||||||||    
T  37270620 aacctgagaacaaaaacat 37270638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 27550871 - 27550992
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||| | |||| | |||||||    
T  27550871 agacttataacaaataaaattttacatcaaatttttttcatctggatgtccttaaattcatcacttacattcataaaatttcttctattctaaaaccccg 27550970  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  27550971 aacgtgagaacaaaaacatctc 27550992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 39588541 - 39588663
Alignment:
Q  19 agacttatgacaaataaaa-ttttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaacccc 117  Q
    |||||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||   |||||||||| ||    
T  39588541 agacttataacaaataaaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttacattcataaattttctttcattccagaactcc 39588640  T
Q  118 gaacgtgagaacaaaaacatctc 140  Q
    |||||||||||||||||||||||    
T  39588641 gaacgtgagaacaaaaacatctc 39588663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 824769 - 824648
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| |||||||   |||||||||||  |    
T  824769 agacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttacatccatacaatttctttcattccagaaccatg 824670  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  824669 aacgtgagaacaaaaacatctc 824648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 11984733 - 11984854
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||| | |||| |||| ||||    
T  11984733 agacttataacaaataaaattttacatcaaatttctttcatcttgatctccttaaattcatcatttacattcataaaatgtcttctattctagaatcccg 11984832  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
     |||||||||||||||||||||    
T  11984833 tacgtgagaacaaaaacatctc 11984854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 9987277 - 9987156
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||| | ||||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||||| | |||| | || ||||    
T  9987277 agacttttaacaaataaaattttacatcaaatatttttcatctagatgtccttaaattcatcaattacattcataaaatttcttccattctaaaatcccg 9987178  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  9987177 aacgtgagaacaaaaacatctc 9987156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 21 - 140
Target Start/End: Original strand, 15420472 - 15420596
Alignment:
Q  21 acttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatt-----tctacaattccagaacc 115  Q
    |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||     ||| | ||| ||||| |    
T  15420472 acttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttacattcataaaattaaatttcttccatttcagaaac 15420571  T
Q  116 ccgaacgtgagaacaaaaacatctc 140  Q
    |||||||||||||||||||||||||    
T  15420572 ccgaacgtgagaacaaaaacatctc 15420596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 7181013 - 7180892
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||| | | |||| | ||||| |    
T  7181013 agacttataacaaataaaattttacatcaaatttttttcatctggatgtccttaaattcatcacttacattcataaaatttattccattctaaaacccag 7180914  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    |||||||||| |||||||||||    
T  7180913 aacgtgagaataaaaacatctc 7180892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 31552089 - 31551963
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttcttt-catctagatgtccttaaattcatcattta----cattcataaaatttctacaattccagaa 113  Q
    ||||| || ||||||||||||||||||||||||| ||| ||||| ||||||||||||||||||| |||    |||||||||||||||| | |||| | ||    
T  31552089 agactaataacaaataaaattttacatcaaattttttttcatctggatgtccttaaattcatcacttaattacattcataaaatttcttccattctaaaa 31551990  T
Q  114 ccccgaacgtgagaacaaaaacatctc 140  Q
    |||||||||||||||||||||||||||    
T  31551989 ccccgaacgtgagaacaaaaacatctc 31551963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 9986513 - 9986581
Alignment:
Q  33 taaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    |||||||| ||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||||||    
T  9986513 taaaatttcacatcaaatttctttcatctaaatgtccttaaatttatcagttacattcataaaatttct 9986581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 744758 - 744835
Alignment:
Q  22 cttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    ||||| |||| |||||||| ||||||||||||||||||||  ||||||||||||| |||| |||||||||||||||||    
T  744758 cttataacaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcagttacattcataaaattt 744835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 19 - 88
Target Start/End: Original strand, 11077010 - 11077079
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacat 88  Q
    |||||||| ||||||||||||||||||||||||| |||||| |  |||||||||||||||||||||||||    
T  11077010 agacttataacaaataaaattttacatcaaatttatttcatttgaatgtccttaaattcatcatttacat 11077079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 27551637 - 27551564
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    |||| |||||||| ||||||||||||||||||||  ||||||||||||| |||| |||||||||||||||||||    
T  27551637 acaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcagttacattcataaaatttct 27551564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 9592654 - 9592583
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||||||||||||||||||||||||  ||||||||||||| |||| ||| |||||||||||||    
T  9592654 acaattaaaattttacatcaaatttctttcatctgaatgtccttaaatttatcagttatattcataaaattt 9592583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 74 - 137
Target Start/End: Complemental strand, 34654250 - 34654187
Alignment:
Q  74 attcatcatttacattcataaaatttctacaattccagaaccccgaacgtgagaacaaaaacat 137  Q
    |||||||| ||||| ||||||||||||| | |||||||||||||||||||||||||||||||||    
T  34654250 attcatcacttacactcataaaatttcttccattccagaaccccgaacgtgagaacaaaaacat 34654187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 15421197 - 15421126
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||| ||||||||||||||||||||  ||||||||||||| |||| ||| |||||||||||||    
T  15421197 acaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcagttatattcataaaattt 15421126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 19665807 - 19665736
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||| ||||||||||||||||||||  ||||||||||||| |||| ||| |||||||||||||    
T  19665807 acaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcagttatattcataaaattt 19665736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 20545369 - 20545440
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||| ||||||||||||||||||||  ||||||||||||| |||| ||| |||||||||||||    
T  20545369 acaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcagttatattcataaaattt 20545440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 30130115 - 30130186
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||| ||||||||||||||||||||  ||||||||||||| |||| ||| |||||||||||||    
T  30130115 acaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcagttatattcataaaattt 30130186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 39589286 - 39589215
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||| ||||||||||||||||||||| ||||||||||||| || | ||| |||||||||||||    
T  39589286 acaattaaaatttcacatcaaatttctttcatctaaatgtccttaaatttattagttatattcataaaattt 39589215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 13304617 - 13304690
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    |||| |||||||| ||||||||||||||||||||  ||||||||||||| |||| ||| ||| |||||||||||    
T  13304617 acaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcagttatatttataaaatttct 13304690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 37271271 - 37271198
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    |||| ||||||||  |||||||||||||||||||  ||||||||||||| |||| ||| |||||||||||||||    
T  37271271 acaattaaaatttcgcatcaaatttctttcatctgaatgtccttaaatttatcagttatattcataaaatttct 37271198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 824002 - 824073
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||| ||||||||||||||||||||  |||| |||||||| |||| ||| |||||||||||||    
T  824002 acaattaaaatttcacatcaaatttctttcatctgaatgtacttaaatttatcagttatattcataaaattt 824073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 12500254 - 12500183
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||| |||||||||||||||||||   ||||||||||||| |||| ||| |||||||||||||    
T  12500254 acaattaaaatttcacatcaaatttctttcatccgaatgtccttaaatttatcagttatattcataaaattt 12500183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 27019292 - 27019363
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||| ||||||||||| ||||||||  ||||||||||||| |||| ||| |||||||||||||    
T  27019292 acaattaaaatttcacatcaaatttatttcatctgaatgtccttaaatttatcagttatattcataaaattt 27019363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 11985502 - 11985429
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    |||| |||||||| ||||||||||| ||||||||  || |||||||||| |||| ||| |||||||||||||||    
T  11985502 acaattaaaatttcacatcaaatttatttcatctgaatttccttaaatttatcagttatattcataaaatttct 11985429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 96
Target Start/End: Original strand, 31551317 - 31551385
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaa 96  Q
    |||| |||||||| ||||||| ||| ||||||||  ||||||||||||| |||| ||||||||||||||    
T  31551317 acaattaaaatttcacatcaattttttttcatctgaatgtccttaaatttatcagttacattcataaaa 31551385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 37939660 - 37939731
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||| ||||||||||||||||||||  | || |||||||| |||| ||| |||||||||||||    
T  37939660 acaattaaaatttcacatcaaatttctttcatctgaacgttcttaaatttatcagttatattcataaaattt 37939731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 42611424 - 42611495
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||| |||||||||||||||||| |  ||||||||||||| || | ||| |||||||||||||    
T  42611424 acaattaaaatttcacatcaaatttctttcatttgaatgtccttaaatttattagttatattcataaaattt 42611495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 106; Significance: 4e-53; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 16664760 - 16664881
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  16664760 agacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttacattcataaaatttcttccattccagaaccccg 16664859  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  16664860 aacgtgagaacaaaaacatctc 16664881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 20786982 - 20786861
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||||||||||||    
T  20786982 agacttataacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcattatttacattcataaaatttcttccattccagaaccccg 20786883  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  20786882 aacgtgagaacaaaaacatctc 20786861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 3035761 - 3035640
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||    
T  3035761 agacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttacattcataaaatttcttccatttcagaaccccg 3035662  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  3035661 aacgtgagaacaaaaacatctc 3035640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 54919498 - 54919619
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| ||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  54919498 agacttataacagataaaattttacatcaaatttctttcatcttgatgtccttaaattcatcatttacattcataaaatttcttccattccagaaccccg 54919597  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  54919598 aacgtgagaacaaaaacatctc 54919619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 21 - 140
Target Start/End: Original strand, 8939518 - 8939637
Alignment:
Q  21 acttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccgaa 120  Q
    |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  8939518 acttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttacattcataaaatttcttccattccagaaccccgaa 8939617  T
Q  121 cgtgagaacaaaaacatctc 140  Q
    ||| ||||||||||||||||    
T  8939618 cgtaagaacaaaaacatctc 8939637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 4653072 - 4653193
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||    
T  4653072 agacttataacaaataaaattttacgtcaaatttctttcatctggatgtccttaaattcatcatttacattcataaaatttcttccatttcagaaccccg 4653171  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  4653172 aacgtgagaacaaaaacatctc 4653193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 13534511 - 13534390
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||    
T  13534511 agacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcacttacattcataaaatttcttccattccagaaccccg 13534412  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||| ||||||||||||||||    
T  13534411 aacgttagaacaaaaacatctc 13534390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 17361241 - 17361362
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| | |||||||||||||     
T  17361241 agacttataacaaataaaattttacatcaaatttctttcatctgaatgtccttaaattcatcatttacattcataaaatttcttccattccagaacccca 17361340  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  17361341 aacgtgagaacaaaaacatctc 17361362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 23419252 - 23419131
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | |||||||||||||     
T  23419252 agacttataataaataaaattttacatcaaatttctttcatctcgatgtccttaaattcatcatttacattcataaaatttcttccattccagaaccccc 23419153  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  23419152 aacgtgagaacaaaaacatctc 23419131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 30827450 - 30827329
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| | |||| |||||||||    
T  30827450 agacttataacaaataaaattttacatcaaatttcttttatctagatgtccttaaattcatcatttacattcataaaatttcttccattctagaaccccg 30827351  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    |||||||||||| |||||||||    
T  30827350 aacgtgagaacataaacatctc 30827329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 35824637 - 35824758
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| | ||||||||| ||||    
T  35824637 agacttataacaaataaaattttacatcaaatttctttcatccagatgtccttaaattcatcacttacattcataaaatttcttccattccagaatcccg 35824736  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  35824737 aacgtgagaacaaaaacatctc 35824758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 46717809 - 46717930
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| | |||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| | ||||||||||||||    
T  46717809 agacttataataaataaaattttacatcaaatttctttcatctggatgtcattaaattcatcatttacattcataaaatttcttccattccagaaccccg 46717908  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  46717909 aacgtgagaacaaaaacatctc 46717930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 52447489 - 52447610
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| ||||||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||| | |||| |||||||||    
T  52447489 agacttataacaaataaaattttacatcaaatttatttcatatggatgtccttaaattcatcatttacattcataaaatttcttccattctagaaccccg 52447588  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  52447589 aacgtgagaacaaaaacatctc 52447610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 30 - 140
Target Start/End: Complemental strand, 49970160 - 49970050
Alignment:
Q  30 aaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccgaacgtgagaac 129  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||| | |||||||||||||||||||||||||    
T  49970160 aaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttatattcataaattttcttccattccagaaccccgaacgtgagaac 49970061  T
Q  130 aaaaacatctc 140  Q
    |||||||||||    
T  49970060 aaaaacatctc 49970050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 20354022 - 20353901
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| ||||||||||||| ||| |||||||||||||||| |||||| |||||||||||||||||||||||||||||||| | |||||| |||||||    
T  20354022 agacttataacaaataaaatttaacaacaaatttctttcatctggatgtctttaaattcatcatttacattcataaaatttcttccattccaaaaccccg 20353923  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  20353922 aacgtgagaacaaaaacatctc 20353901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 49873835 - 49873956
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||   ||||||||| ||||    
T  49873835 agacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttacattcataaaatttctttcattccagaaacccg 49873934  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    || ||||||||||||| |||||    
T  49873935 aatgtgagaacaaaaatatctc 49873956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 28 - 140
Target Start/End: Complemental strand, 27962382 - 27962270
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccgaacgtgaga 127  Q
    |||||| |||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||    
T  27962382 acaaatcaaattttacatcaaatttcttttatctggatatccttaaattcatcatttacattcataaaatttctttcattccagaaccccgaacgtgaga 27962283  T
Q  128 acaaaaacatctc 140  Q
    |||||||||||||    
T  27962282 acaaaaacatctc 27962270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 19 - 137
Target Start/End: Complemental strand, 23933502 - 23933384
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||| |||||||| || | ||||||||||||||    
T  23933502 agacttataacaaataaaattttacatcaaatttctttcatttggatgtccttaaattcatcacttacatttataaaattccttccattccagaaccccg 23933403  T
Q  119 aacgtgagaacaaaaacat 137  Q
    ||| |||||||||||||||    
T  23933402 aacatgagaacaaaaacat 23933384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 38 - 140
Target Start/End: Original strand, 35045118 - 35045220
Alignment:
Q  38 ttttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccgaacgtgagaacaaaaacat 137  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||| ||| |||||||||||    
T  35045118 ttttacatcaaatttctttcatctagatgtccttaaattcatcacttacattcataaaatttcttccattccagaaccccgaacatgataacaaaaacat 35045217  T
Q  138 ctc 140  Q
    |||    
T  35045218 ctc 35045220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 34073133 - 34073253
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| |||||||||||||||||||||| || |||||||| ||||||||||||||||||| ||||||||||||||||||| | |||| | |||||||    
T  34073133 agacttataacaaataaaattttacatcaaaatt-tttcatctggatgtccttaaattcatcacttacattcataaaatttcttccattctaaaaccccg 34073231  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  34073232 aacgtgagaacaaaaacatctc 34073253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 19 - 134
Target Start/End: Complemental strand, 31292549 - 31292434
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||   |||||| |||||||    
T  31292549 agacttataacaaataaatttttacatcaaatttctttcatctggatgtccttaaattcatcatttacattcattaaatttctttcattccaaaaccccg 31292450  T
Q  119 aacgtgagaacaaaaa 134  Q
    |||||||||| |||||    
T  31292449 aacgtgagaaaaaaaa 31292434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 23 - 119
Target Start/End: Original strand, 7487388 - 7487484
Alignment:
Q  23 ttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccga 119  Q
    |||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||    
T  7487388 ttataacaaataaaatttcacatcaaatttctttcatctggatgtccttaaattcatcatttacattcataaaatttcttccattccagaaccccga 7487484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 31309743 - 31309864
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcat-aaaatttctacaattccagaacccc 117  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||  | | | |||||| ||||||    
T  31309743 agacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcacttacattcataaaaaaatattc-attccaaaacccc 31309841  T
Q  118 gaacgtgagaacaaaaacatctc 140  Q
    |||||||||||||||||||||||    
T  31309842 gaacgtgagaacaaaaacatctc 31309864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 19 - 139
Target Start/End: Complemental strand, 50496136 - 50496011
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttct-----ttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaa 113  Q
    |||||||| ||||||||||||||||||||| ||| |     ||||||| ||||||||||||||||||  ||||||||||||||||||  | |||||| ||    
T  50496136 agacttataacaaataaaattttacatcaattttttttttcttcatctggatgtccttaaattcatcgcttacattcataaaatttcatccattccaaaa 50496037  T
Q  114 ccccgaacgtgagaacaaaaacatct 139  Q
    ||||||||||||||||||||| ||||    
T  50496036 ccccgaacgtgagaacaaaaatatct 50496011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 64 - 140
Target Start/End: Complemental strand, 55451023 - 55450947
Alignment:
Q  64 atgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccgaacgtgagaacaaaaacatctc 140  Q
    |||||||| ||||||| || |||||||||||||||||| | ||||||||||||| |||||||||||||| |||||||    
T  55451023 atgtccttgaattcataatctacattcataaaatttcttccattccagaacccccaacgtgagaacaaagacatctc 55450947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 34073876 - 34073803
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    |||| |||||||  ||||||||||||||||||||  ||||||||||||| |||| |||||||||||||||||||    
T  34073876 acaattaaaattacacatcaaatttctttcatctgaatgtccttaaatttatcagttacattcataaaatttct 34073803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 35825407 - 35825334
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    |||| |||||||| ||||||||||||||||||||  ||||||||||||| |||| ||| |||||||||||||||    
T  35825407 acaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcagttatattcataaaatttct 35825334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 46718580 - 46718507
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    |||| |||||||| ||||||||||||||||||||  ||||||||||||| |||| ||| |||||||||||||||    
T  46718580 acaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcagttatattcataaaatttct 46718507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 33 - 101
Target Start/End: Complemental strand, 49874602 - 49874534
Alignment:
Q  33 taaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    |||||||||||||||||||||||||||||  ||||||||||| | |||| ||| |||||||||||||||    
T  49874602 taaaattttacatcaaatttctttcatctgaatgtccttaaaattatcagttatattcataaaatttct 49874534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 3034999 - 3035070
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||| ||||||||||||||||||||  ||||||||||||| |||| ||| |||||||||||||    
T  3034999 acaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcagttatattcataaaattt 3035070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 4653834 - 4653763
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||| ||||||||||||||||||||  ||||||||||||| |||| ||| |||||||||||||    
T  4653834 acaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcagttatattcataaaattt 4653763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 16665522 - 16665451
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||| ||||||||||||||||||||  ||||||||||||| |||| ||| |||||||||||||    
T  16665522 acaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcagttatattcataaaattt 16665451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 17361964 - 17361893
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||| ||||||||||||||||||||  ||||||||||||| |||| ||| |||||||||||||    
T  17361964 acaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcacttatattcataaaattt 17361893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 20786277 - 20786348
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||| ||||||||||||||||||||  ||||||||||||| |||| ||| |||||||||||||    
T  20786277 acaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcagttatattcataaaattt 20786348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 23418488 - 23418559
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||| ||||||||||||||||||||  ||||||||||||| |||| ||| |||||||||||||    
T  23418488 acaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcagttatattcataaaattt 23418559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 52448251 - 52448180
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||| ||||||||||||||||||||  ||||||||||||| |||| ||| |||||||||||||    
T  52448251 acaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcagttatattcataaaattt 52448180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 54920261 - 54920190
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||| ||||||||||||||||||||  ||||||||||||| |||| ||| |||||||||||||    
T  54920261 acaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcagttatattcataaaattt 54920190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 99
Target Start/End: Original strand, 41040735 - 41040801
Alignment:
Q  33 taaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||||||| ||||||||||||||||||||  ||||||||||||| |||| ||| |||||||||||||    
T  41040735 taaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcagttatattcataaaattt 41040801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 27958667 - 27958740
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    |||| |||||||| ||||||||||||||||||||  ||||||||||||| || | ||| |||||||||||||||    
T  27958667 acaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttataaattatattcataaaatttct 27958740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 31291870 - 31291943
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    |||| |||||||| ||||||||||||||||||||  ||||||||||||  |||| ||| |||||||||||||||    
T  31291870 acaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatctatcagttatattcataaaatttct 31291943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 35045832 - 35045759
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    |||| |||||||| ||||||||||| ||||||||  ||||||||||||| |||| ||| |||||||||||||||    
T  35045832 acaattaaaatttcacatcaaatttatttcatctgaatgtccttaaatttatcagttatattcataaaatttct 35045759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 20342525 - 20342596
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||| ||||||||||| ||||||||  ||||||||||||| |||| ||| |||||||||||||    
T  20342525 acaattaaaatttcacatcaaatttatttcatctgaatgtccttaaatttatcagttatattcataaaattt 20342596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 20353250 - 20353321
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||| ||||||||||| ||||||||  ||||||||||||| |||| ||| |||||||||||||    
T  20353250 acaattaaaatttcacatcaaatttttttcatctgaatgtccttaaatttatcagttatattcataaaattt 20353321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 34 - 101
Target Start/End: Original strand, 23932737 - 23932804
Alignment:
Q  34 aaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    ||||||| ||||||||||||||||| ||  ||||||||||||| |||| ||| |||||||||||||||    
T  23932737 aaaatttcacatcaaatttctttcagctgaatgtccttaaatttatcagttatattcataaaatttct 23932804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 81
Target Start/End: Original strand, 9368075 - 9368128
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatca 81  Q
    |||| |||||||| ||||||||||||||||||||  ||||||||||||| ||||    
T  9368075 acaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatca 9368128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 7488128 - 7488057
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||| ||||||||||||||||||||  |||   ||||||| |||| ||| |||||||||||||    
T  7488128 acaattaaaatttcacatcaaatttctttcatctgaatgcatttaaatttatcagttatattcataaaattt 7488057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 50495443 - 50495513
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    |||| |||||||| |||||||||||||   ||||  |||||||||| || || |||||||||||||||||||||    
T  50495443 acaattaaaatttcacatcaaatttct---atctgaatgtccttaagtttataatttacattcataaaatttct 50495513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 13533744 - 13533817
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    |||| |||||||| |||| |  ||| ||||||||  ||||||||||||| |||| ||| |||||||||||||||    
T  13533744 acaattaaaatttcacataatttttttttcatctgaatgtccttaaatttatcagttatattcataaaatttct 13533817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 41041384 - 41041352
Alignment:
Q  23 ttatgacaaataaaattttacatcaaatttctt 55  Q
    |||| ||||||||||||||||||||||||||||    
T  41041384 ttataacaaataaaattttacatcaaatttctt 41041352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 106; Significance: 4e-53; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 38282198 - 38282077
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  38282198 agacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttacattcataaaatttcttccattccagaaccccg 38282099  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  38282098 aacgtgagaacaaaaacatctc 38282077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 6644756 - 6644877
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||    
T  6644756 agacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcacttacattcataaaatttcttcaattccggaaccccg 6644855  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  6644856 aacgtgagaacaaaaacatctc 6644877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 15152669 - 15152790
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  15152669 agacttataacaaataaaattttacatcaaatttctttcatcaggatgtccttaaattcatcatttacattcataaaatttcttctattccagaaccccg 15152768  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  15152769 aacgtgagaacaaaaacatctc 15152790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 25223570 - 25223691
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||    
T  25223570 agacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttacatttataaaatttcttcgattccagaaccccg 25223669  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  25223670 aacgtgagaacaaaaacatctc 25223691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 19 - 139
Target Start/End: Complemental strand, 37725439 - 37725319
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  37725439 agacttataacaaataaaattttacattaaatttctttcatctggatgtccttaaattcatcatttacattcataaaatttcttccattccagaaccccg 37725340  T
Q  119 aacgtgagaacaaaaacatct 139  Q
    |||||||||||||||||||||    
T  37725339 aacgtgagaacaaaaacatct 37725319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 4738176 - 4738055
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||    
T  4738176 agacttataacaaataaaattttacatcaaatttctttcatttggatgtccttaaattcatcatttacattcataaaatttcttccattccagaacctcg 4738077  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  4738076 aacgtgagaacaaaaacatctc 4738055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 20 - 140
Target Start/End: Complemental strand, 77539 - 77419
Alignment:
Q  20 gacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccga 119  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| | | |||||||||||||||    
T  77539 gacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttacattcgtaaaattttttctattccagaaccccga 77440  T
Q  120 acgtgagaacaaaaacatctc 140  Q
    |||||||||||||||||||||    
T  77439 acgtgagaacaaaaacatctc 77419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 2292238 - 2292117
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| | |||||| |||||||    
T  2292238 agacttataataaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcagttacattcataaaatttcttccattccaaaaccccg 2292139  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  2292138 aacgtgagaacaaaaacatctc 2292117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 3851663 - 3851542
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||| | |||||| |||||||    
T  3851663 agacttataacaaataaaattttacatcaaatttatttcatctggatgtccttaaattcatcacttacattcataaaatttcttccattccaaaaccccg 3851564  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  3851563 aacgtgagaacaaaaacatctc 3851542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 3906829 - 3906708
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| | |||| |||||||||    
T  3906829 agacttataacaaataaaattttacatcaaatttctttcatctgaatgtccttaaattcatcatttacattcataaaatttcttccattctagaaccccg 3906730  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||| ||||||||||||||    
T  3906729 aacgtgaaaacaaaaacatctc 3906708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 21 - 140
Target Start/End: Complemental strand, 3754818 - 3754699
Alignment:
Q  21 acttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccgaa 120  Q
    |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| | |||||| || ||||||    
T  3754818 acttataacaaataaaattttacatcaaatttctttcatctcgatgtccttaaattcatcacttacattcataaaatttcttccattccaaaatcccgaa 3754719  T
Q  121 cgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||    
T  3754718 cgtgagaacaaaaacatctc 3754699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 15399079 - 15399200
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| ||||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||||||| |||| | ||||||||||||||    
T  15399079 agacttataacaaataaaattttacatcaaatttctttcaactggatgtccttaaattcatcacttacattcataaaacttcttccattccagaaccccg 15399178  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    || |||||||||||||||||||    
T  15399179 aatgtgagaacaaaaacatctc 15399200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 39775038 - 39774919
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| |||||||||||||||||||||||||  ||||||| ||||||||||||||||||| ||||||||||||||||||| | |||||| |||||||    
T  39775038 agacttataacaaataaaattttacatcaaattt--ttcatctggatgtccttaaattcatcacttacattcataaaatttcttccattccaaaaccccg 39774941  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  39774940 aacgtgagaacaaaaacatctc 39774919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 37 - 139
Target Start/End: Complemental strand, 39967078 - 39966976
Alignment:
Q  37 attttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccgaacgtgagaacaaaaaca 136  Q
    |||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  39967078 attttacatcaaatttatttcatctgaatgtccttaaattcatcatttacattcataaaatttcttcaattccagaaccccgaacttgagaacaaaaaca 39966979  T
Q  137 tct 139  Q
    |||    
T  39966978 tct 39966976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 42080736 - 42080615
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| |||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||   ||| || |||||||    
T  42080736 agacttataacaaataaaattttacatcaaacttctttcatctggatgtccttaaattcatcacttacattcataaaatttctttcatttcaaaaccccg 42080637  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||| ||||||||||||||||||    
T  42080636 aacatgagaacaaaaacatctc 42080615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 27551534 - 27551413
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| ||||||||||||||||||||||||| || ||||| ||| || |||||||||||| ||||||||||||||||||| | | || | |||||||    
T  27551534 agacttataacaaataaaattttacatcaaattttttccatctggatctctttaaattcatcacttacattcataaaatttcttccactctaaaaccccg 27551435  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  27551434 aacgtgagaacaaaaacatctc 27551413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 28391739 - 28391618
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||        ||||||||||||||    
T  28391739 agacttataacaaataaaattttacatcaaatttctttcatctggatctccttaaattcatcacttacattcataaaaaaaaatttattccagaaccccg 28391640  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  28391639 aacgtgagaacaaaaacatctc 28391618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 14006001 - 14005921
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  14006001 agacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttacattcataaaattt 14005921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 27550783 - 27550856
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    |||| |||||||| ||||||||||||||||||||  ||||||||||||| |||| |||||||||||||||||||    
T  27550783 acaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcagttacattcataaaatttct 27550856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 20 - 101
Target Start/End: Original strand, 2291460 - 2291541
Alignment:
Q  20 gacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    ||||||| |||| |||||||| |||||||||| |||||||||  ||||||||||||| |||| ||| |||||||||||||||    
T  2291460 gacttataacaattaaaatttcacatcaaattcctttcatctgaatgtccttaaatttatcagttatattcataaaatttct 2291541  T

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Target: chr2; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 4737406 - 4737479
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    |||| |||||||| ||||||||||||||||||||  ||||||||||||| |||| ||| |||||||||||||||    
T  4737406 acaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcagttatattcataaaatttct 4737479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 76805 - 76876
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||| ||||||||||||||||||||  ||||||||||||| |||| ||| |||||||||||||    
T  76805 acaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcagttatattcataaaattt 76876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 28391122 - 28391193
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||| ||||||||||||||||||||  ||||||||||||| |||| ||| |||||||||||||    
T  28391122 acaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcagttatattcataaaattt 28391193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 37724680 - 37724751
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||| ||||||||||||||||||||  ||||||||||||| |||| ||| |||||||||||||    
T  37724680 acaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcagttatattcataaaattt 37724751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 38281436 - 38281507
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||| ||||||||||||||||||||  ||||||||||||| |||| ||| |||||||||||||    
T  38281436 acaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcagttatattcataaaattt 38281507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 1054311 - 1054384
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    |||| |||||||| ||||||||||||||||||||  |||||||| |||| |||| ||| |||||||||||||||    
T  1054311 acaattaaaatttcacatcaaatttctttcatctgaatgtccttgaatttatcagttatattcataaaatttct 1054384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 15153429 - 15153356
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    |||| |||||||| ||||||||||||||||||||  ||||||||||||| |||| ||| ||||||| |||||||    
T  15153429 acaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcagttatattcatagaatttct 15153356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 15399854 - 15399781
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    |||| |||||||| ||||||||||| ||||||||  ||||||||||||| |||| ||| |||||||||||||||    
T  15399854 acaattaaaatttcacatcaaatttttttcatctgaatgtccttaaatttatcagttatattcataaaatttct 15399781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 33 - 101
Target Start/End: Complemental strand, 6645519 - 6645451
Alignment:
Q  33 taaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    |||||||| ||||||||||||||||||||  ||||||||||||| || | |||| ||||||||||||||    
T  6645519 taaaatttcacatcaaatttctttcatctgaatgtccttaaatttatgagttacgttcataaaatttct 6645451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 33 - 99
Target Start/End: Original strand, 3906084 - 3906150
Alignment:
Q  33 taaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||||||| ||||||||||||||||||||   |||||||||||| |||| ||| |||||||||||||    
T  3906084 taaaatttcacatcaaatttctttcatctgattgtccttaaatttatcagttatattcataaaattt 3906150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 40494659 - 40494736
Alignment:
Q  22 cttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    ||||| |||| |||||||| || ||||||||||||||| ||||||||||||||| ||||| |||  || |||||||||    
T  40494659 cttataacaattaaaatttcacttcaaatttctttcatttagatgtccttaaatccatcagttatgttaataaaattt 40494736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 39068178 - 39068246
Alignment:
Q  33 taaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    |||||||| |||| ||||||||||||| |  ||||||||||||| |||| ||| |||||||||||||||    
T  39068178 taaaatttcacattaaatttctttcatttgaatgtccttaaatttatcagttatattcataaaatttct 39068246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 39774356 - 39774426
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    ||||||||||||| |||||||||||||   ||||  |||||||||| || || |||||||||||||||||||||    
T  39774356 acaaataaaatttcacatcaaatttct---atcttaatgtccttaagtttataatttacattcataaaatttct 39774426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 39966334 - 39966405
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||  ||||||||||| ||||||||  ||||||||||||| |||| ||| |||||||||||||    
T  39966334 acaattaaaattacacatcaaatttatttcatctgaatgtccttaaatttatcagttatattcataaaattt 39966405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 3850969 - 3851039
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    |||| |||||||| |||||||||||||   ||||  |||||||||| || || |||||||||||||||||||||    
T  3850969 acaattaaaatttcacatcaaatttct---atctgaatgtccttaagtttataatttacattcataaaatttct 3851039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 42080038 - 42080108
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    |||| |||||||| |||||||||||||   ||||  |||||||||| || || |||||||||||||||||||||    
T  42080038 acaattaaaatttcacatcaaatttct---atctgaatgtccttaagtttataatttacattcataaaatttct 42080108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 106; Significance: 4e-53; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 33704690 - 33704811
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  33704690 agacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttacattcataaaatttcttccattccagaaccccg 33704789  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  33704790 aacgtgagaacaaaaacatctc 33704811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 36307932 - 36308053
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  36307932 agacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttacattcataaaatttcttccattccagaaccccg 36308031  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  36308032 aacgtgagaacaaaaacatctc 36308053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 7153014 - 7153135
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||    
T  7153014 agacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttacattcataaattttcttccattccagaaccccg 7153113  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  7153114 aacgtgagaacaaaaacatctc 7153135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 14488741 - 14488620
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||   ||||||||||||||    
T  14488741 agacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttacattcataaaatttctttcattccagaaccccg 14488642  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  14488641 aacgtgagaacaaaaacatctc 14488620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 24781154 - 24781275
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| | ||||||||||||||    
T  24781154 agacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattaatcatttacattcataaaatttcttccattccagaaccccg 24781253  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  24781254 aacgtgagaacaaaaacatctc 24781275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 29521844 - 29521723
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||    
T  29521844 agacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcacttacattcataaaatttcttccattccagaaccccg 29521745  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  29521744 aacgtgagaacaaaaacatctc 29521723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 31030180 - 31030301
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  31030180 agacttataacaaataaaattttacatcaaatttatttcatctcgatgtccttaaatttatcatttacattcataaaatttcttcaattccagaaccccg 31030279  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  31030280 aacgtgagaacaaaaacatctc 31030301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 21 - 139
Target Start/End: Original strand, 10772825 - 10772943
Alignment:
Q  21 acttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccgaa 120  Q
    |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||    
T  10772825 acttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttacattcataaaatttcttccattcaagaaccccgaa 10772924  T
Q  121 cgtgagaacaaaaacatct 139  Q
    |||||||||||||| ||||    
T  10772925 cgtgagaacaaaaatatct 10772943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 36730756 - 36730877
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| | ||||||||| ||||    
T  36730756 agacttataataaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcacttacattcataaaatttcttccattccagaatcccg 36730855  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  36730856 aacgtgagaacaaaaacatctc 36730877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 48127864 - 48127985
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| | |||| | |||||||    
T  48127864 agacttataacaaataaaattttacatcaaatttctttcatttggatgtccttaaattcatcatttacattcataaaatttcttccattctaaaaccccg 48127963  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  48127964 aacgtgagaacaaaaacatctc 48127985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 19 - 139
Target Start/End: Complemental strand, 44512339 - 44512219
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | | |||| |||||||||    
T  44512339 agacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttacattcataaaatttattccattctagaaccccg 44512240  T
Q  119 aacgtgagaacaaaaacatct 139  Q
    ||||||| |||||||||||||    
T  44512239 aacgtgaaaacaaaaacatct 44512219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 12768330 - 12768451
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| | | |||||| |||||||    
T  12768330 agacttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcacttacattcataaaatttattccattccaaaaccccg 12768429  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||| ||||||||||||||||||    
T  12768430 aacttgagaacaaaaacatctc 12768451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 35954507 - 35954628
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| ||||||||||||||||||||||||||| |||||| ||||| ||||||||||||| ||||||||||||||||||| | |||| |||||||||    
T  35954507 agacttataacaaataaaattttacatcaaatttctgtcatctggatgtacttaaattcatcacttacattcataaaatttcttccattctagaaccccg 35954606  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  35954607 aacgtgagaacaaaaacatctc 35954628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 25655940 - 25656061
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| ||||||||||||||||||||| ||| |||||||| ||||||||||||||||||| ||||||||||||||||||| | |||  | |||||||    
T  25655940 agacttataacaaataaaattttacatcaattttttttcatctggatgtccttaaattcatcacttacattcataaaatttcttccattataaaaccccg 25656039  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  25656040 aacgtgagaacaaaaacatctc 25656061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 23 - 137
Target Start/End: Complemental strand, 30302936 - 30302822
Alignment:
Q  23 ttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccgaacg 122  Q
    |||| ||||||||||||||| ||||||||| ||| |||| ||||||||||||||||||| ||||||||||||||||| | |||||||| |||||||||||    
T  30302936 ttataacaaataaaattttaaatcaaatttatttaatctggatgtccttaaattcatcacttacattcataaaatttattcaattccataaccccgaacg 30302837  T
Q  123 tgagaacaaaaacat 137  Q
    |||||||||||||||    
T  30302836 tgagaacaaaaacat 30302822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 20 - 137
Target Start/End: Complemental strand, 33006378 - 33006261
Alignment:
Q  20 gacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccga 119  Q
    ||||||| |||||||||||||| ||||||||||||||||||| |||||||| |||||| ||| ||||||||||||||||||| | ||| || ||||||||    
T  33006378 gacttataacaaataaaattttgcatcaaatttctttcatctggatgtcctcaaattcttcacttacattcataaaatttcttccatttcaaaaccccga 33006279  T
Q  120 acgtgagaacaaaaacat 137  Q
    ||||||||||||||||||    
T  33006278 acgtgagaacaaaaacat 33006261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 5326809 - 5326930
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||||   |||||  ||||||     
T  5326809 agacttataacaaataaaattttacatcaaatttctttcatccagatgtctttaaattcatcacttacattcataaaatttctttcattccgaaacccca 5326908  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    | ||||||||| ||||||||||    
T  5326909 accgtgagaaccaaaacatctc 5326930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 20 - 140
Target Start/End: Original strand, 46118328 - 46118447
Alignment:
Q  20 gacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccga 119  Q
    ||||||| ||||||||||||||| ||||||||| ||| || | ||||||||||||||||||| ||||||||||||||||| | | ||||||||| | |||    
T  46118328 gacttataacaaataaaattttaaatcaaatttatttaatttggatgtccttaaattcatcacttacattcataaaatttattccattccagaa-ctcga 46118426  T
Q  120 acgtgagaacaaaaacatctc 140  Q
    |||||||||||||||||||||    
T  46118427 acgtgagaacaaaaacatctc 46118447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 19 - 101
Target Start/End: Complemental strand, 29649611 - 29649529
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||    
T  29649611 agacttataacaaataaaattttacatcaaatttctttcatcttgatgtccttaaattcatcactaacattcataaaatttct 29649529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 52404691 - 52404809
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| ||||| ||||||||||||||||||| | |||| | ||||||||||| | ||||| ||||||||||||| ||||| | |||||||||||||     
T  52404691 agacttataacaaacaaaattttacatcaaattt-tatcatttggatgtccttaa-tccatcacttacattcataaa-tttcttccattccagaacccca 52404787  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||||||||||||||||||||||    
T  52404788 aacgtgagaacaaaaacatctc 52404809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 51086864 - 51086926
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatca 81  Q
    |||||||| |||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  51086864 agacttataacaaataaaattttacatcaaatttctttcatccggatgtccttaaattcatca 51086926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 46463984 - 46463911
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    |||| |||||||| ||||||||||||||||||||  |||||||||| || ||||||||||||||||||||||||    
T  46463984 acaattaaaatttcacatcaaatttctttcatctgaatgtccttaattttatcatttacattcataaaatttct 46463911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 33705456 - 33705385
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||||||||||||||||||||||||  ||||||||||||| |||| ||| |||||||||||||    
T  33705456 acaattaaaattttacatcaaatttctttcatctgaatgtccttaaatttatcagttatattcataaaattt 33705385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 25656701 - 25656628
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    |||| |||||||| ||||||||||| ||||||||  ||||||||||||| |||| |||||||||||||||||||    
T  25656701 acaattaaaatttcacatcaaatttttttcatctgaatgtccttaaatttatcagttacattcataaaatttct 25656628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 30302164 - 30302237
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    |||| |||||||| |||||||||||||||||| |  ||||||||||||| |||| |||||||||||||||||||    
T  30302164 acaattaaaatttcacatcaaatttctttcatttcaatgtccttaaatttatcaattacattcataaaatttct 30302237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 33005597 - 33005670
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    |||| |||||||| |||||||||||||||||| |  |||||||||| || ||||||||||||||||||||||||    
T  33005597 acaattaaaatttcacatcaaatttctttcatatgaatgtccttaagtttatcatttacattcataaaatttct 33005670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 7153776 - 7153705
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||| ||||||||||||||||||||  ||||||||||||| |||| ||| |||||||||||||    
T  7153776 acaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcagttatattcataaaattt 7153705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 10773587 - 10773516
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||| ||||||||||||||||||||  ||||||||||||| |||| ||| |||||||||||||    
T  10773587 acaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcagttatattcataaaattt 10773516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 36308698 - 36308627
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||| ||||||||||||||||||||  ||||||||||||| |||| ||| |||||||||||||    
T  36308698 acaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcagttatattcataaaattt 36308627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 137
Target Start/End: Original strand, 29648716 - 29648834
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccaga---------accccg 118  Q
    |||| |||||||| |||||||| ||||||||| |  ||||||||||||| |||| || |||||||||||||||| | ||||||||         ||||||    
T  29648716 acaattaaaatttcacatcaaagttctttcatttgaatgtccttaaatttatcaatttcattcataaaatttcttctattccagaatccagaacaccccg 29648815  T
Q  119 aacgtgagaacaaaaacat 137  Q
    |||||||||||||||||||    
T  29648816 aacgtgagaacaaaaacat 29648834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 35 - 101
Target Start/End: Complemental strand, 36731520 - 36731454
Alignment:
Q  35 aaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    |||||| ||||||||||||||||||||  ||||||||||||| |||| ||| |||||||||||||||    
T  36731520 aaatttcacatcaaatttctttcatctgaatgtccttaaatttatcagttatattcataaaatttct 36731454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 35955280 - 35955207
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    |||| |||||||| |||||||||||||||| |||  ||||||||||||| |||| ||| |||||||||||||||    
T  35955280 acaattaaaatttcacatcaaatttctttcttctgaatgtccttaaatttatcagttatattcataaaatttct 35955207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 51087581 - 51087508
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    |||| |||||||| ||||||||||||||| ||||  ||||||||||||| |||| ||| |||||||||||||||    
T  51087581 acaattaaaatttcacatcaaatttctttaatctgaatgtccttaaatttatcagttatattcataaaatttct 51087508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 63 - 140
Target Start/End: Original strand, 52405835 - 52405910
Alignment:
Q  63 gatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccgaacgtgagaacaaaaacatctc 140  Q
    ||||||||||| | ||||| ||||||||||||| ||||| | ||||||||||||| ||||||||||||||||||||||    
T  52405835 gatgtccttaa-tccatcacttacattcataaa-tttcttccattccagaaccccaaacgtgagaacaaaaacatctc 52405910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 63 - 140
Target Start/End: Original strand, 52406167 - 52406242
Alignment:
Q  63 gatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccgaacgtgagaacaaaaacatctc 140  Q
    ||||||||||| | ||||| ||||||||||||| ||||| | ||||||||||||| ||||||||||||||||||||||    
T  52406167 gatgtccttaa-tccatcacttacattcataaa-tttcttccattccagaaccccaaacgtgagaacaaaaacatctc 52406242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 34 - 88
Target Start/End: Original strand, 7556365 - 7556419
Alignment:
Q  34 aaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacat 88  Q
    |||| |||||||||||||||||||||||  |||||||||||||||||| ||||||    
T  7556365 aaaaatttacatcaaatttctttcatctgaatgtccttaaattcatcagttacat 7556419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 33 - 99
Target Start/End: Original strand, 44511587 - 44511653
Alignment:
Q  33 taaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||||||| ||||||||||||||||||||  ||||||||||||| | || ||| |||||||||||||    
T  44511587 taaaatttcacatcaaatttctttcatctgaatgtccttaaatttaccagttatattcataaaattt 44511653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 29521150 - 29521223
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    |||| |||||||| | ||||||||||||||||||  ||||||||||||| || | ||| |||||||||||||||    
T  29521150 acaattaaaatttcatatcaaatttctttcatctgaatgtccttaaatttattagttatattcataaaatttct 29521223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 46119099 - 46119026
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    |||| |||||||| |||||||||||||||||| |  || || ||||||| |||| |||||||||||||||||||    
T  46119099 acaattaaaatttcacatcaaatttctttcatttcaatatctttaaatttatcaattacattcataaaatttct 46119026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 52405439 - 52405378
Alignment:
Q  35 aaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaa 96  Q
    |||||| ||||||||||||||||||||  ||||||||||||| |||| |||| |||||||||    
T  52405439 aaatttcacatcaaatttctttcatctgaatgtccttaaatttatcaattacgttcataaaa 52405378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 52406872 - 52406811
Alignment:
Q  35 aaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaa 96  Q
    |||||| ||||||||||||||||||||  ||||||||||||| |||| |||| |||||||||    
T  52406872 aaatttcacatcaaatttctttcatctgaatgtccttaaatttatcaattacgttcataaaa 52406811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 14487975 - 14488046
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||| ||| ||||||||||||||| ||||  ||||||||||||| |||| ||| |||||||||||||    
T  14487975 acaattaaattttcacatcaaatttctttaatctgaatgtccttaaatttatcagttatattcataaaattt 14488046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 14536564 - 14536635
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||| ||| ||||||||||||||| ||||  ||||||||||||| |||| ||| |||||||||||||    
T  14536564 acaattaaattttcacatcaaatttctttaatctgaatgtccttaaatttatcagttatattcataaaattt 14536635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 30838627 - 30838589
Alignment:
Q  20 gacttatgacaaataaaattttacatcaaatttctttca 58  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  30838627 gacttataacaaataaaattttacatcaaatttctttca 30838589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 86; Significance: 3e-41; HSPs: 2)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 6004 - 5883
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||| ||||| | |||| |||||||||    
T  6004 agacttataacaaataaaattttacatcaaatttctttcatctggatttccctaaattcatcatttacattcataaactttcttccattctagaaccccg 5905  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||| ||||||||||||||||||    
T  5904 aacatgagaacaaaaacatctc 5883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 101
Target Start/End: Original strand, 5136 - 5217
Alignment:
Q  20 gacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    ||||||| |||| || ||||| ||||||||  | |||||| |  ||||||||||||| |||| |||||||||||||||||||    
T  5136 gacttataacaattataatttcacatcaaaactgtttcatttgaatgtccttaaatttatcaattacattcataaaatttct 5217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 56409 - 56530
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||||| | | |||||| |||||||    
T  56409 agacttataacaaataaaattttacatcatatttctttcatctggatgtccttaaattcatcacttacattcataaaatttattccattccaaaaccccg 56508  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    ||| ||||||||||||||||||    
T  56509 aacttgagaacaaaaacatctc 56530  T

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Target: scaffold0208 (Bit Score: 83; Significance: 2e-39; HSPs: 2)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 19 - 137
Target Start/End: Complemental strand, 5707 - 5589
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||| | |||| | ||||||     
T  5707 agacttataacaaataaaattttacatcaaatttttttcatctggatgtccttaaattcatcacttacattcataaaatttcttccattctaaaacccct 5608  T
Q  119 aacgtgagaacaaaaacat 137  Q
    |||||||||||||||||||    
T  5607 aacgtgagaacaaaaacat 5589  T

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Target: scaffold0208; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 4987 - 5060
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttct 101  Q
    |||| ||| |||| ||||||||||||||||||||  |||| |||||||| || | |||||||||||||||||||    
T  4987 acaattaagatttcacatcaaatttctttcatctgaatgttcttaaatttattagttacattcataaaatttct 5060  T

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Target: scaffold0003 (Bit Score: 74; Significance: 4e-34; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 48876 - 48755
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| |||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||| | ||||||  || |      
T  48876 agacttataacaaataaaattttacatcaaatttctttcgtttggatgtccttaaattcatcatttacattcataaaatttcttccattccattactcaa 48777  T
Q  119 aacgtgagaacaaaaacatctc 140  Q
    |||||||||||||||| |||||    
T  48776 aacgtgagaacaaaaatatctc 48755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 46612 - 46683
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    |||| |||||||| |||||||| |||||||||||  ||| ||||||||| |||| ||| |||||||||||||    
T  46612 acaattaaaatttcacatcaaaattctttcatctgaatgcccttaaatttatcagttatattcataaaattt 46683  T

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Target: scaffold0115 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 19 - 134
Target Start/End: Original strand, 20993 - 21107
Alignment:
Q  19 agacttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttctacaattccagaaccccg 118  Q
    |||||||| ||||||||||||||||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||| | | |||||||||||| |    
T  20993 agacttataacaaataaaattttacatcaaatttatttcaacg-gatgtccttaaattcatcatttacattcataaaattttttccattccagaaccctg 21091  T
Q  119 aacgtgagaacaaaaa 134  Q
    ||| |||||| |||||    
T  21092 aacttgagaaaaaaaa 21107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 22846 - 22769
Alignment:
Q  22 cttatgacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaattt 99  Q
    ||||| |||| |||||||| ||||||||||||||||||||  ||||||||||||| |||| ||| |||||||||||||    
T  22846 cttataacaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcagttatattcataaaattt 22769  T

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Target: scaffold0075 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 28 - 96
Target Start/End: Original strand, 18473 - 18541
Alignment:
Q  28 acaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttacattcataaaa 96  Q
    |||| |||||||| ||||||||||||||||||||  ||||||||||||| |||| ||||||||||||||    
T  18473 acaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcagttacattcataaaa 18541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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