View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14404_high_65 (Length: 242)
Name: NF14404_high_65
Description: NF14404
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14404_high_65 |
 | |
|
Alignment Details
Target: chr8 (Bit Score: 110; Significance: 1e-55; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 84 - 197
Target Start/End: Original strand, 8931362 - 8931475
Alignment:
| Q |
84 |
tcattcccaataccttcaacaacaccaacaccattcacaatttcttctttttcattaataccattatcaccaacataatcaaaactacttttttcaccaa |
183 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8931362 |
tcattcccaataccttcaacaacaccaacaccattcacaatttcttctttttcattaataccattatcaccaacataatcaaaactacttttttcaccaa |
8931461 |
T |
|
| Q |
184 |
acttatctttattt |
197 |
Q |
| |
|
||||||||| |||| |
|
|
| T |
8931462 |
acttatcttcattt |
8931475 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University