View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14404_high_7 (Length: 550)

Name: NF14404_high_7
Description: NF14404
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14404_high_7
NF14404_high_7
[»] chr6 (89 HSPs)
chr6 (6-252)||(6339067-6339312)
chr6 (1-252)||(6330352-6330604)
chr6 (253-412)||(9892943-9893102)
chr6 (253-414)||(28364891-28365052)
chr6 (253-412)||(6598444-6598603)
chr6 (253-413)||(15364457-15364617)
chr6 (253-413)||(22579348-22579508)
chr6 (251-415)||(24661006-24661170)
chr6 (253-409)||(25397982-25398138)
chr6 (253-412)||(20182125-20182284)
chr6 (253-412)||(22153707-22153866)
chr6 (253-412)||(26224408-26224567)
chr6 (248-412)||(495627-495791)
chr6 (254-409)||(21140920-21141075)
chr6 (268-413)||(1939241-1939386)
chr6 (252-412)||(2992594-2992754)
chr6 (253-413)||(11049750-11049910)
chr6 (269-413)||(21990174-21990317)
chr6 (253-412)||(2669289-2669448)
chr6 (253-412)||(16250802-16250960)
chr6 (252-412)||(30833960-30834120)
chr6 (251-415)||(33250705-33250869)
chr6 (251-415)||(6978257-6978419)
chr6 (268-413)||(22083833-22083978)
chr6 (268-412)||(12200689-12200833)
chr6 (268-412)||(26939582-26939726)
chr6 (253-412)||(12951688-12951847)
chr6 (252-411)||(27796835-27796994)
chr6 (250-412)||(18033526-18033687)
chr6 (287-412)||(6605496-6605621)
chr6 (283-412)||(15448395-15448524)
chr6 (253-414)||(18492349-18492510)
chr6 (252-396)||(23281765-23281908)
chr6 (292-411)||(5360428-5360547)
chr6 (268-414)||(12160845-12160990)
chr6 (268-412)||(9885238-9885382)
chr6 (248-412)||(12351586-12351750)
chr6 (254-394)||(12844984-12845124)
chr6 (287-415)||(15961404-15961532)
chr6 (252-412)||(18048767-18048927)
chr6 (287-412)||(12499230-12499356)
chr6 (287-412)||(12506559-12506685)
chr6 (287-412)||(12509545-12509671)
chr6 (253-382)||(27705402-27705531)
chr6 (287-406)||(5192195-5192314)
chr6 (253-412)||(14886541-14886700)
chr6 (253-412)||(17919516-17919675)
chr6 (254-382)||(343593-343721)
chr6 (301-412)||(15509184-15509295)
chr6 (267-415)||(11530219-11530367)
chr6 (287-409)||(11077663-11077785)
chr6 (268-402)||(22055622-22055756)
chr6 (268-412)||(21691495-21691640)
chr6 (287-416)||(28668114-28668243)
chr6 (22-218)||(6352801-6353013)
chr6 (268-405)||(9060086-9060222)
chr6 (253-414)||(12680184-12680343)
chr6 (287-411)||(10458778-10458902)
chr6 (287-409)||(14872133-14872255)
chr6 (287-371)||(13145016-13145100)
chr6 (330-413)||(5250196-5250279)
chr6 (268-412)||(14036615-14036751)
chr6 (287-406)||(20692817-20692936)
chr6 (252-366)||(19175823-19175936)
chr6 (287-408)||(1954895-1955015)
chr6 (303-412)||(14772691-14772800)
chr6 (268-408)||(12157380-12157520)
chr6 (268-382)||(5270387-5270502)
chr6 (330-414)||(8844166-8844251)
chr6 (268-413)||(11431638-11431784)
chr6 (287-414)||(6065451-6065578)
chr6 (291-413)||(10929495-10929618)
chr6 (287-382)||(33547560-33547655)
chr6 (292-406)||(12205191-12205305)
chr6 (271-412)||(13251379-13251520)
chr6 (268-415)||(16118141-16118288)
chr6 (283-368)||(3673177-3673262)
chr6 (287-409)||(11350196-11350315)
chr6 (373-416)||(33191180-33191223)
chr6 (268-382)||(2396198-2396313)
chr6 (324-411)||(28234036-28234123)
chr6 (333-411)||(28221652-28221730)
chr6 (276-413)||(30745718-30745853)
chr6 (345-415)||(7000879-7000950)
chr6 (329-412)||(9878515-9878597)
chr6 (269-352)||(13668054-13668137)
chr6 (257-351)||(33636964-33637058)
chr6 (255-320)||(3619635-3619700)
chr6 (287-355)||(16764825-16764893)
[»] chr1 (76 HSPs)
chr1 (253-413)||(6412052-6412212)
chr1 (253-412)||(9109975-9110134)
chr1 (250-412)||(12720786-12720948)
chr1 (252-413)||(6459196-6459357)
chr1 (252-412)||(45839271-45839431)
chr1 (250-412)||(12161791-12161953)
chr1 (252-413)||(23457876-23458037)
chr1 (251-412)||(52183656-52183817)
chr1 (253-413)||(15243065-15243225)
chr1 (253-412)||(22158782-22158941)
chr1 (246-412)||(20408160-20408326)
chr1 (253-405)||(18890556-18890708)
chr1 (252-412)||(22603527-22603687)
chr1 (253-413)||(17200009-17200169)
chr1 (283-415)||(41120734-41120866)
chr1 (250-412)||(29549395-29549557)
chr1 (252-413)||(14760846-14761007)
chr1 (252-413)||(50845329-50845490)
chr1 (251-415)||(46339442-46339606)
chr1 (252-395)||(41071852-41071995)
chr1 (253-412)||(48522498-48522657)
chr1 (283-413)||(4340417-4340547)
chr1 (287-413)||(28229454-28229580)
chr1 (253-414)||(7181553-7181714)
chr1 (283-412)||(9177110-9177239)
chr1 (268-405)||(9464098-9464235)
chr1 (251-412)||(41752411-41752572)
chr1 (268-412)||(17661045-17661189)
chr1 (253-413)||(38531169-38531329)
chr1 (287-413)||(46790014-46790140)
chr1 (253-414)||(18894898-18895059)
chr1 (268-412)||(9985327-9985471)
chr1 (252-411)||(9259184-9259343)
chr1 (269-412)||(50092298-50092441)
chr1 (287-413)||(19865258-19865384)
chr1 (252-413)||(46865222-46865383)
chr1 (252-413)||(51973403-51973564)
chr1 (283-406)||(46785964-46786087)
chr1 (252-413)||(20290320-20290480)
chr1 (268-412)||(19081723-19081867)
chr1 (268-412)||(19129611-19129755)
chr1 (253-412)||(7830011-7830170)
chr1 (287-412)||(8940994-8941119)
chr1 (248-412)||(12989827-12989991)
chr1 (268-412)||(13102311-13102455)
chr1 (252-408)||(16913581-16913736)
chr1 (273-382)||(32046876-32046985)
chr1 (287-412)||(13308820-13308945)
chr1 (252-413)||(12369950-12370101)
chr1 (253-412)||(22789593-22789750)
chr1 (304-411)||(25787998-25788105)
chr1 (268-413)||(41063192-41063337)
chr1 (268-412)||(20580904-20581049)
chr1 (253-413)||(13195563-13195723)
chr1 (268-380)||(13522993-13523105)
chr1 (268-411)||(17733954-17734098)
chr1 (268-413)||(18787912-18788054)
chr1 (268-402)||(30928388-30928522)
chr1 (275-382)||(12174796-12174903)
chr1 (268-413)||(11917781-11917925)
chr1 (287-379)||(41359001-41359094)
chr1 (253-413)||(29093553-29093713)
chr1 (268-407)||(26825235-26825374)
chr1 (316-413)||(27253854-27253951)
chr1 (268-408)||(16258490-16258630)
chr1 (287-412)||(12806836-12806963)
chr1 (268-339)||(14486705-14486776)
chr1 (268-402)||(6775882-6776015)
chr1 (283-412)||(39748943-39749072)
chr1 (287-382)||(9882070-9882162)
chr1 (268-382)||(52621149-52621263)
chr1 (288-412)||(45918904-45919028)
chr1 (283-387)||(30673504-30673608)
chr1 (287-398)||(49881058-49881168)
chr1 (268-382)||(25687310-25687424)
chr1 (253-309)||(13295039-13295095)
[»] chr7 (68 HSPs)
chr7 (253-412)||(22486374-22486533)
chr7 (252-413)||(11036487-11036647)
chr7 (253-413)||(20174000-20174160)
chr7 (251-415)||(20429443-20429607)
chr7 (252-412)||(24605817-24605977)
chr7 (268-412)||(28800873-28801017)
chr7 (253-412)||(23577189-23577348)
chr7 (253-412)||(31425511-31425670)
chr7 (253-412)||(23232019-23232178)
chr7 (253-412)||(27805998-27806157)
chr7 (250-412)||(18217807-18217968)
chr7 (268-412)||(23699825-23699969)
chr7 (268-412)||(47523650-47523794)
chr7 (273-412)||(21917334-21917473)
chr7 (252-414)||(37135283-37135445)
chr7 (263-412)||(7733312-7733461)
chr7 (253-414)||(15014403-15014564)
chr7 (277-413)||(1842898-1843034)
chr7 (287-413)||(3904477-3904603)
chr7 (253-413)||(38057612-38057772)
chr7 (273-412)||(23750736-23750875)
chr7 (273-413)||(9698537-9698677)
chr7 (253-413)||(39979623-39979783)
chr7 (251-415)||(40847432-40847596)
chr7 (253-412)||(1907335-1907494)
chr7 (273-412)||(6849211-6849350)
chr7 (268-413)||(42926418-42926564)
chr7 (287-412)||(3872187-3872312)
chr7 (268-413)||(48933131-48933276)
chr7 (253-382)||(10050866-10050995)
chr7 (283-412)||(21623031-21623159)
chr7 (291-414)||(2650826-2650949)
chr7 (289-412)||(23539248-23539371)
chr7 (252-395)||(36636485-36636628)
chr7 (250-412)||(816191-816353)
chr7 (253-413)||(33427670-33427829)
chr7 (279-414)||(14786633-14786768)
chr7 (268-412)||(21871567-21871707)
chr7 (251-412)||(36993798-36993959)
chr7 (268-412)||(20923958-20924102)
chr7 (287-413)||(1824199-1824325)
chr7 (268-410)||(32267342-32267483)
chr7 (253-412)||(15969766-15969924)
chr7 (273-382)||(45664768-45664877)
chr7 (251-403)||(26415402-26415554)
chr7 (268-396)||(31042246-31042374)
chr7 (268-411)||(24140445-24140588)
chr7 (287-413)||(4514779-4514905)
chr7 (287-412)||(2093362-2093487)
chr7 (268-408)||(2457665-2457803)
chr7 (268-404)||(22501589-22501725)
chr7 (287-414)||(26577279-26577406)
chr7 (253-413)||(27130314-27130472)
chr7 (268-411)||(27132722-27132865)
chr7 (270-408)||(27304869-27305005)
chr7 (268-412)||(25777112-25777256)
chr7 (251-412)||(687855-688005)
chr7 (286-403)||(11852021-11852138)
chr7 (268-412)||(10222630-10222773)
chr7 (479-538)||(31448884-31448943)
chr7 (268-382)||(11890177-11890291)
chr7 (268-370)||(15330247-15330349)
chr7 (346-412)||(38090336-38090402)
chr7 (482-535)||(31460323-31460376)
chr7 (287-412)||(1821996-1822118)
chr7 (265-402)||(8116463-8116599)
chr7 (345-405)||(5106740-5106799)
chr7 (305-411)||(1841784-1841889)
[»] chr3 (92 HSPs)
chr3 (253-412)||(27449064-27449223)
chr3 (268-413)||(19269863-19270008)
chr3 (253-413)||(9652554-9652714)
chr3 (251-412)||(18091547-18091709)
chr3 (267-412)||(11007683-11007828)
chr3 (268-411)||(11915749-11915892)
chr3 (250-412)||(5260910-5261072)
chr3 (253-403)||(29704041-29704191)
chr3 (253-405)||(18539780-18539932)
chr3 (269-413)||(25882562-25882706)
chr3 (253-412)||(7623531-7623690)
chr3 (250-412)||(17762615-17762777)
chr3 (250-412)||(19063935-19064097)
chr3 (268-413)||(8110330-8110475)
chr3 (268-413)||(18104529-18104674)
chr3 (283-412)||(48404866-48404995)
chr3 (252-412)||(18379999-18380159)
chr3 (253-413)||(26390633-26390793)
chr3 (283-414)||(13921331-13921462)
chr3 (273-412)||(19223445-19223584)
chr3 (268-414)||(4393348-4393494)
chr3 (268-412)||(8428162-8428306)
chr3 (253-413)||(30219314-30219474)
chr3 (274-413)||(1310958-1311097)
chr3 (253-412)||(29956348-29956507)
chr3 (253-412)||(30005503-30005662)
chr3 (287-413)||(13905037-13905163)
chr3 (283-412)||(21816727-21816856)
chr3 (287-412)||(26098823-26098948)
chr3 (283-412)||(29236050-29236179)
chr3 (252-412)||(8543445-8543603)
chr3 (252-412)||(16299836-16299996)
chr3 (274-412)||(19610335-19610473)
chr3 (273-413)||(10803716-10803857)
chr3 (268-413)||(11085341-11085486)
chr3 (251-412)||(11837214-11837375)
chr3 (251-412)||(29215966-29216127)
chr3 (272-412)||(11219133-11219273)
chr3 (253-409)||(28389949-28390105)
chr3 (287-412)||(43329763-43329888)
chr3 (253-412)||(10941665-10941827)
chr3 (252-382)||(17582331-17582461)
chr3 (254-412)||(31250065-31250223)
chr3 (287-412)||(1745488-1745612)
chr3 (287-412)||(3461310-3461435)
chr3 (287-412)||(23773487-23773612)
chr3 (253-409)||(1628191-1628347)
chr3 (252-412)||(15490010-15490169)
chr3 (253-412)||(26830441-26830601)
chr3 (267-415)||(46942478-46942625)
chr3 (287-414)||(5565732-5565859)
chr3 (253-412)||(36543725-36543884)
chr3 (297-414)||(8546265-8546382)
chr3 (273-382)||(19545506-19545615)
chr3 (251-412)||(23217208-23217369)
chr3 (268-412)||(21020056-21020200)
chr3 (268-412)||(49915442-49915586)
chr3 (268-411)||(27968906-27969049)
chr3 (287-413)||(15063991-15064117)
chr3 (283-396)||(28859597-28859710)
chr3 (253-412)||(36564439-36564598)
chr3 (287-412)||(21490034-21490159)
chr3 (268-412)||(31433728-31433872)
chr3 (268-382)||(27212811-27212925)
chr3 (287-412)||(6088228-6088353)
chr3 (287-412)||(17269604-17269729)
chr3 (268-412)||(29451085-29451230)
chr3 (290-382)||(6718723-6718815)
chr3 (283-412)||(10772053-10772183)
chr3 (287-412)||(5744426-5744551)
chr3 (287-412)||(5781385-5781510)
chr3 (287-412)||(46012728-46012853)
chr3 (283-412)||(47263265-47263394)
chr3 (287-412)||(50665636-50665761)
chr3 (283-414)||(21088758-21088887)
chr3 (268-396)||(20615359-20615487)
chr3 (251-414)||(27182656-27182817)
chr3 (277-407)||(26963254-26963384)
chr3 (303-412)||(37283549-37283658)
chr3 (317-412)||(20761950-20762045)
chr3 (268-413)||(20088391-20088541)
chr3 (283-412)||(15501551-15501681)
chr3 (316-413)||(6447245-6447342)
chr3 (295-413)||(13615433-13615551)
chr3 (287-362)||(23233213-23233288)
chr3 (295-381)||(27711199-27711285)
chr3 (369-410)||(11386427-11386468)
chr3 (283-328)||(35579609-35579654)
chr3 (287-382)||(50240756-50240851)
chr3 (378-416)||(23233180-23233218)
chr3 (345-407)||(40287486-40287547)
chr3 (283-401)||(45304340-45304458)
[»] scaffold0219 (1 HSPs)
scaffold0219 (251-415)||(19581-19745)
[»] chr5 (63 HSPs)
chr5 (253-412)||(12045707-12045866)
chr5 (250-403)||(23975612-23975765)
chr5 (268-413)||(618289-618434)
chr5 (251-412)||(15060951-15061112)
chr5 (251-416)||(17039627-17039792)
chr5 (253-413)||(16121838-16121998)
chr5 (252-412)||(36196373-36196533)
chr5 (251-415)||(33818558-33818722)
chr5 (253-412)||(7888777-7888936)
chr5 (253-412)||(8886851-8887010)
chr5 (268-413)||(12328225-12328370)
chr5 (268-412)||(8108860-8109004)
chr5 (253-412)||(2472714-2472873)
chr5 (287-413)||(746867-746993)
chr5 (273-412)||(23408980-23409120)
chr5 (253-413)||(35620343-35620502)
chr5 (253-412)||(13974078-13974237)
chr5 (268-413)||(28265474-28265619)
chr5 (287-412)||(38837671-38837796)
chr5 (252-412)||(36831890-36832050)
chr5 (287-413)||(10494751-10494877)
chr5 (287-412)||(4125188-4125313)
chr5 (256-412)||(5982628-5982785)
chr5 (283-412)||(26708585-26708714)
chr5 (283-412)||(26978319-26978448)
chr5 (253-413)||(13620126-13620286)
chr5 (251-415)||(17986707-17986871)
chr5 (253-412)||(25652583-25652742)
chr5 (253-412)||(36716200-36716359)
chr5 (263-413)||(23423755-23423905)
chr5 (251-415)||(7003727-7003888)
chr5 (287-412)||(16631874-16631999)
chr5 (255-415)||(20959490-20959650)
chr5 (283-414)||(24138839-24138970)
chr5 (253-412)||(27428012-27428171)
chr5 (287-413)||(40484058-40484184)
chr5 (267-414)||(10420250-10420397)
chr5 (268-414)||(17036410-17036556)
chr5 (287-413)||(25397787-25397913)
chr5 (268-413)||(25673228-25673372)
chr5 (268-412)||(11927786-11927930)
chr5 (287-411)||(17771969-17772093)
chr5 (252-412)||(20187941-20188101)
chr5 (252-384)||(33816786-33816918)
chr5 (268-382)||(17079400-17079514)
chr5 (268-411)||(33734974-33735116)
chr5 (269-402)||(32726736-32726869)
chr5 (287-409)||(35778155-35778277)
chr5 (253-402)||(3080706-3080855)
chr5 (253-382)||(18413536-18413665)
chr5 (287-412)||(36597340-36597465)
chr5 (268-411)||(16472182-16472325)
chr5 (285-413)||(23974575-23974703)
chr5 (279-382)||(5043541-5043644)
chr5 (253-328)||(29727930-29728005)
chr5 (250-335)||(22649406-22649491)
chr5 (368-412)||(29727895-29727939)
chr5 (373-414)||(19890984-19891025)
chr5 (292-369)||(31853131-31853208)
chr5 (367-412)||(16464723-16464768)
chr5 (287-382)||(9024227-9024323)
chr5 (251-309)||(19891028-19891086)
chr5 (268-324)||(31158641-31158697)
[»] chr8 (67 HSPs)
chr8 (253-414)||(19240845-19241006)
chr8 (253-414)||(19314029-19314190)
chr8 (253-413)||(3823111-3823271)
chr8 (252-412)||(17810275-17810435)
chr8 (253-412)||(4330956-4331115)
chr8 (251-415)||(21350454-21350618)
chr8 (253-412)||(24193196-24193355)
chr8 (253-414)||(27869216-27869377)
chr8 (253-413)||(4647754-4647914)
chr8 (268-412)||(24576024-24576168)
chr8 (252-412)||(27910764-27910924)
chr8 (252-412)||(27957183-27957343)
chr8 (253-413)||(33652545-33652705)
chr8 (273-412)||(8555304-8555443)
chr8 (257-412)||(17824616-17824771)
chr8 (251-416)||(17103861-17104026)
chr8 (283-415)||(19256220-19256352)
chr8 (253-412)||(29350901-29351061)
chr8 (253-413)||(32961637-32961797)
chr8 (253-412)||(6817032-6817191)
chr8 (268-414)||(18010058-18010204)
chr8 (270-412)||(43431559-43431701)
chr8 (253-412)||(16061939-16062098)
chr8 (253-412)||(22939291-22939450)
chr8 (283-412)||(11938753-11938881)
chr8 (287-412)||(32247921-32248046)
chr8 (253-414)||(40289419-40289579)
chr8 (283-413)||(24636660-24636791)
chr8 (268-410)||(9915043-9915184)
chr8 (287-413)||(19488060-19488186)
chr8 (283-413)||(30466953-30467083)
chr8 (283-413)||(30687944-30688074)
chr8 (251-412)||(6816383-6816544)
chr8 (252-412)||(29345048-29345208)
chr8 (287-413)||(13060930-13061056)
chr8 (290-412)||(25655858-25655980)
chr8 (283-412)||(5670169-5670298)
chr8 (287-415)||(23752283-23752411)
chr8 (254-412)||(21219240-21219396)
chr8 (253-414)||(15251581-15251740)
chr8 (283-412)||(25000431-25000560)
chr8 (287-412)||(25273328-25273452)
chr8 (287-412)||(31399508-31399633)
chr8 (287-412)||(8824837-8824962)
chr8 (253-414)||(18844542-18844703)
chr8 (253-410)||(37992077-37992234)
chr8 (251-413)||(9631380-9631542)
chr8 (253-373)||(5879182-5879302)
chr8 (287-415)||(10917839-10917967)
chr8 (287-414)||(33412975-33413095)
chr8 (287-412)||(26399007-26399132)
chr8 (332-412)||(25274654-25274734)
chr8 (272-412)||(31344172-31344312)
chr8 (287-405)||(14304241-14304359)
chr8 (287-379)||(19493688-19493781)
chr8 (308-412)||(8789873-8789977)
chr8 (330-413)||(42700656-42700739)
chr8 (272-413)||(6084245-6084384)
chr8 (254-414)||(17003241-17003401)
chr8 (268-406)||(3692176-3692315)
chr8 (252-328)||(25651055-25651131)
chr8 (348-415)||(24479810-24479877)
chr8 (287-382)||(41527730-41527825)
chr8 (314-408)||(2265383-2265476)
chr8 (252-336)||(24479874-24479958)
chr8 (270-382)||(29473330-29473442)
chr8 (346-406)||(35678065-35678125)
[»] chr4 (60 HSPs)
chr4 (253-413)||(55309211-55309372)
chr4 (253-415)||(46286226-46286388)
chr4 (273-414)||(32175735-32175876)
chr4 (253-412)||(19839157-19839316)
chr4 (253-412)||(27040025-27040184)
chr4 (251-415)||(30268985-30269149)
chr4 (251-415)||(30283040-30283204)
chr4 (273-412)||(5473847-5473986)
chr4 (253-413)||(19680423-19680583)
chr4 (268-412)||(22168261-22168405)
chr4 (273-413)||(45532578-45532718)
chr4 (268-413)||(2275676-2275822)
chr4 (268-414)||(18051832-18051978)
chr4 (253-407)||(37378628-37378782)
chr4 (252-413)||(22128311-22128472)
chr4 (283-415)||(13028813-13028945)
chr4 (253-412)||(33914037-33914196)
chr4 (283-413)||(4586757-4586887)
chr4 (287-412)||(7111946-7112071)
chr4 (273-413)||(13564914-13565054)
chr4 (268-412)||(36689670-36689814)
chr4 (287-412)||(9670479-9670604)
chr4 (253-402)||(25147699-25147848)
chr4 (287-412)||(38645762-38645887)
chr4 (253-413)||(44783460-44783621)
chr4 (253-412)||(5399587-5399746)
chr4 (290-412)||(9238625-9238747)
chr4 (287-413)||(38619859-38619985)
chr4 (252-405)||(30568006-30568159)
chr4 (283-412)||(54539294-54539423)
chr4 (253-412)||(8878861-8879020)
chr4 (253-415)||(12071940-12072102)
chr4 (287-412)||(29625337-29625462)
chr4 (268-412)||(1638440-1638584)
chr4 (283-411)||(4627079-4627207)
chr4 (268-412)||(9913251-9913395)
chr4 (283-413)||(25026565-25026695)
chr4 (287-412)||(9239281-9239406)
chr4 (252-413)||(16915346-16915507)
chr4 (283-412)||(18714910-18715039)
chr4 (253-411)||(24682328-24682484)
chr4 (268-382)||(18744100-18744214)
chr4 (287-412)||(30507999-30508124)
chr4 (268-413)||(38223503-38223648)
chr4 (254-382)||(22156631-22156759)
chr4 (287-382)||(14944758-14944853)
chr4 (287-412)||(42055409-42055534)
chr4 (287-413)||(4606828-4606954)
chr4 (290-412)||(9058952-9059074)
chr4 (287-412)||(12105995-12106119)
chr4 (283-412)||(45091282-45091398)
chr4 (268-412)||(30420033-30420177)
chr4 (253-342)||(37761912-37762001)
chr4 (253-412)||(3612973-3613133)
chr4 (268-405)||(39234935-39235071)
chr4 (268-411)||(29238416-29238559)
chr4 (283-396)||(34557191-34557304)
chr4 (287-382)||(6553816-6553911)
chr4 (268-413)||(25225092-25225235)
chr4 (291-382)||(313603-313694)
[»] scaffold0576 (1 HSPs)
scaffold0576 (253-413)||(9228-9388)
[»] chr2 (57 HSPs)
chr2 (252-412)||(20065074-20065234)
chr2 (253-412)||(15636735-15636894)
chr2 (252-405)||(1141511-1141664)
chr2 (253-412)||(32185808-32185967)
chr2 (253-412)||(37723992-37724151)
chr2 (253-414)||(13788053-13788214)
chr2 (254-411)||(23388379-23388535)
chr2 (252-413)||(28841341-28841502)
chr2 (268-405)||(32300442-32300579)
chr2 (251-415)||(14757118-14757282)
chr2 (252-412)||(41736147-41736307)
chr2 (287-418)||(43408505-43408636)
chr2 (252-409)||(28262339-28262496)
chr2 (268-412)||(22140364-22140508)
chr2 (253-412)||(30783314-30783473)
chr2 (253-412)||(41637594-41637753)
chr2 (283-412)||(12779606-12779735)
chr2 (278-411)||(28319580-28319713)
chr2 (273-413)||(32008948-32009089)
chr2 (268-412)||(8430287-8430431)
chr2 (268-412)||(21293711-21293855)
chr2 (253-412)||(29749403-29749562)
chr2 (283-412)||(37552233-37552362)
chr2 (268-412)||(18551253-18551397)
chr2 (253-412)||(13613093-13613252)
chr2 (287-412)||(7093578-7093703)
chr2 (255-418)||(31266332-31266495)
chr2 (268-413)||(27327607-27327752)
chr2 (287-412)||(44476375-44476500)
chr2 (275-413)||(44722930-44723068)
chr2 (283-412)||(23857958-23858086)
chr2 (317-412)||(27039908-27040003)
chr2 (287-413)||(26243320-26243446)
chr2 (253-412)||(40018778-40018937)
chr2 (268-402)||(44366007-44366141)
chr2 (268-412)||(26687690-26687835)
chr2 (285-414)||(36550844-36550972)
chr2 (268-402)||(18916411-18916544)
chr2 (268-413)||(2556086-2556231)
chr2 (252-412)||(37802379-37802538)
chr2 (287-407)||(38362276-38362396)
chr2 (268-412)||(9004308-9004452)
chr2 (253-343)||(27522987-27523077)
chr2 (253-413)||(36373876-36374034)
chr2 (268-412)||(22192183-22192314)
chr2 (263-395)||(35697442-35697573)
chr2 (253-350)||(29998621-29998718)
chr2 (269-413)||(18609506-18609650)
chr2 (268-395)||(9590461-9590588)
chr2 (267-386)||(13134646-13134765)
chr2 (253-321)||(27058407-27058475)
chr2 (267-400)||(8763624-8763757)
chr2 (345-406)||(12860235-12860296)
chr2 (330-412)||(16098917-16098999)
chr2 (252-387)||(24117254-24117389)
chr2 (289-382)||(31966555-31966647)
chr2 (268-314)||(16099002-16099048)
[»] scaffold0603 (1 HSPs)
scaffold0603 (253-412)||(5979-6138)
[»] scaffold0001 (3 HSPs)
scaffold0001 (251-412)||(84281-84442)
scaffold0001 (268-415)||(8107-8254)
scaffold0001 (268-415)||(21839-21986)
[»] scaffold0599 (1 HSPs)
scaffold0599 (268-411)||(7500-7643)
[»] scaffold0007 (4 HSPs)
scaffold0007 (277-415)||(3746-3884)
scaffold0007 (267-412)||(202768-202913)
scaffold0007 (346-412)||(274665-274731)
scaffold0007 (251-339)||(276207-276295)
[»] scaffold0076 (1 HSPs)
scaffold0076 (273-414)||(26483-26624)
[»] scaffold0023 (1 HSPs)
scaffold0023 (253-414)||(39701-39862)
[»] scaffold0009 (3 HSPs)
scaffold0009 (251-412)||(219614-219775)
scaffold0009 (287-411)||(182544-182668)
scaffold0009 (287-412)||(215663-215781)
[»] scaffold0108 (1 HSPs)
scaffold0108 (253-413)||(12633-12792)
[»] scaffold0087 (1 HSPs)
scaffold0087 (253-412)||(37787-37946)
[»] scaffold0047 (1 HSPs)
scaffold0047 (253-412)||(58562-58721)
[»] scaffold0240 (1 HSPs)
scaffold0240 (283-413)||(14989-15119)
[»] scaffold0058 (1 HSPs)
scaffold0058 (253-414)||(74539-74700)
[»] scaffold0717 (1 HSPs)
scaffold0717 (268-413)||(917-1063)
[»] scaffold0014 (1 HSPs)
scaffold0014 (283-412)||(22221-22350)
[»] scaffold0184 (1 HSPs)
scaffold0184 (253-409)||(7436-7592)
[»] scaffold0161 (1 HSPs)
scaffold0161 (251-415)||(6773-6937)
[»] scaffold0128 (1 HSPs)
scaffold0128 (283-415)||(10660-10792)
[»] scaffold0062 (1 HSPs)
scaffold0062 (271-413)||(43915-44057)
[»] scaffold0069 (1 HSPs)
scaffold0069 (251-412)||(10136-10297)
[»] scaffold0006 (2 HSPs)
scaffold0006 (287-408)||(84678-84799)
scaffold0006 (275-412)||(120987-121124)
[»] scaffold0655 (1 HSPs)
scaffold0655 (252-418)||(3156-3320)
[»] scaffold0002 (1 HSPs)
scaffold0002 (287-413)||(439977-440103)
[»] scaffold0035 (1 HSPs)
scaffold0035 (253-409)||(74720-74877)
[»] scaffold0019 (1 HSPs)
scaffold0019 (267-412)||(173438-173584)
[»] scaffold0502 (1 HSPs)
scaffold0502 (253-402)||(10872-11021)
[»] scaffold0011 (1 HSPs)
scaffold0011 (324-412)||(17617-17705)
[»] scaffold0554 (1 HSPs)
scaffold0554 (346-413)||(9883-9950)
[»] scaffold0024 (1 HSPs)
scaffold0024 (254-343)||(112309-112398)
[»] scaffold0284 (1 HSPs)
scaffold0284 (287-382)||(1549-1644)
[»] scaffold0211 (1 HSPs)
scaffold0211 (287-382)||(19168-19263)
[»] scaffold0114 (1 HSPs)
scaffold0114 (287-382)||(36316-36411)
[»] scaffold0038 (2 HSPs)
scaffold0038 (324-411)||(34197-34284)
scaffold0038 (333-411)||(22150-22228)


Alignment Details
Target: chr6 (Bit Score: 219; Significance: 1e-120; HSPs: 89)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 6 - 252
Target Start/End: Original strand, 6339067 - 6339312
Alignment:
Q  6 agtaagagtggtaggtgctaaattgtagggaagagtatggacatgagttataaaaggtaacatgatagtttgcaaatacacgtagatatgacatagatac 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  6339067 agtaagagtggtaggtgctaaattgtagggaagagtatggacatgaattataaaaggtaacatgatagtttgcaaatacacgtagatatgacatggatac 6339166  T
Q  106 ttaaagtagagtatgcatgtaacatgttattaaattcaagataatattgccatcatcttgattaagtcaattctacaatattaatatgttcatatcttac 205  Q
    ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6339167 ttaaattagagtatgcatgtaacatgttattaaattcaagatcatattgccatcatcttgattaagtcaattctacaatattaatatgttcatatcttac 6339266  T
Q  206 caactataaccgcaatagatctcggagattcctttctattctaaaat 252  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||    
T  6339267 caactataaccgcaatagatctcggaggttcctttc-attctaaaat 6339312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 1 - 252
Target Start/End: Original strand, 6330352 - 6330604
Alignment:
Q  1 agatgagtaagagtggta----ggtgctaaattgtagggaagagtatggacatgagttataaaaggtaacatgatagtttgcaaatacacgtagatatga 96  Q
    ||||||||||||||||||    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6330352 agatgagtaagagtggtaggtaggtgctaaattgtaggggagagtatggacatgagttataaaaggtaacatgatagtttgcaaatacacgtagatatga 6330451  T
Q  97 catagatacttaaagtagagtatgcatgtaacatgttattaaattcaagataatattgccatcatcttgattaagtcaattctacaatattaatatgttc 196  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| |||||   |||    
T  6330452 catagatacttaaagtagagtatgcatgtaacatgttattaaattcaagataatactgccatcatcttgattcagtcaattctacaattttaat---ttc 6330548  T
Q  197 atatcttaccaactataaccgcaatagatctcggagattcctttctattctaaaat 252  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  6330549 atatcttaccaactataaccgcaatagatccaggagattcctttctattctaaaat 6330604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 253 - 412
Target Start/End: Original strand, 9892943 - 9893102
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||  |||||||    
T  9892943 cactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgt 9893042  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9893043 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 9893102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 253 - 414
Target Start/End: Original strand, 28364891 - 28365052
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||  |||||||    
T  28364891 cactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgt 28364990  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgta 414  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28364991 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgta 28365052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 253 - 412
Target Start/End: Original strand, 6598444 - 6598603
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  |||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||  |||||||    
T  6598444 cactactaaaaaaacaaaaattagtgagggatatttagtgagggaaaacttgaaatccctctctaattccgtcactaaattttgcgaccaagtaatttgt 6598543  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6598544 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 6598603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 253 - 413
Target Start/End: Complemental strand, 15364617 - 15364457
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  |||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||| ||||||||||||||  |||||||    
T  15364617 cactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacgtaaaatccttctctaattccgtcactaaattttgcgaccaaggaatttgt 15364518  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  15364517 gaggaatttcattttttccgtcactaatttccctcactaattttgctttttctagtagtgt 15364457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 253 - 413
Target Start/End: Complemental strand, 22579508 - 22579348
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||||   |||||||    
T  22579508 cactactaaaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatagaatttgt 22579409  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  22579408 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctaatagtgt 22579348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 251 - 415
Target Start/End: Complemental strand, 24661170 - 24661006
Alignment:
Q  251 atcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaattt 350  Q
    ||||||||||| |||  |||||||||||||||| ||||||||||||||||| ||||||| |||| ||||||||||| | ||||||||||||||  |||||    
T  24661170 atcactactaaaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatctctctctaattccgtcattaaattttgcgaccaaggaattt 24661071  T
Q  351 gtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgtat 415  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24661070 gtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgtat 24661006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 253 - 409
Target Start/End: Original strand, 25397982 - 25398138
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||  |||||||    
T  25397982 cactactaaaaaaataaaaattagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgt 25398081  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagta 409  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  25398082 gaggaatttcattttttccgtcactaatttccctcgctaatttttctttttctagta 25398138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 253 - 412
Target Start/End: Original strand, 20182125 - 20182284
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||| |||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||| ||  ||||||||    
T  20182125 cactactaaaaaatcaaaaattagtgaggcaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgatcatgaaatttgt 20182224  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  20182225 gaggaatttcattttttccgtcactaatttccctcgctaattttactttttctagtagtg 20182284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 253 - 412
Target Start/End: Complemental strand, 22153866 - 22153707
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||| |||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||| ||  ||||||||    
T  22153866 cactactaaaaaatcaaaaattagtgaggcaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgatcatgaaatttgt 22153767  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  22153766 gaggaatttcattttttccgtcactaatttccctcgctaattttactttttctagtagtg 22153707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 253 - 412
Target Start/End: Original strand, 26224408 - 26224567
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  ||||||||| |||||| ||||||||||||||||| |||||||||||| ||||||||||||| ||||||| |||||| ||||||||    
T  26224408 cactactaaaaaaacaaaaattagcgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgtgaccaagaaatttgt 26224507  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26224508 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 26224567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 248 - 412
Target Start/End: Complemental strand, 495791 - 495627
Alignment:
Q  248 aaaatcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaa 347  Q
    |||||||||||||| |||   ||| ||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||| ||||||||||||||  ||    
T  495791 aaaatcactactaaaaaaactaaatttagtgagggaaatttagtgagggaaaacgtaaaatcactctctaattccgtcactaaattttgcgaccaaggaa 495692  T
Q  348 tttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  495691 tttgtgaggaatttcattttttccgtcactaatttcccttgctaattttgctttttctagtagtg 495627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 254 - 409
Target Start/End: Original strand, 21140920 - 21141075
Alignment:
Q  254 actactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtg 353  Q
    |||||||| |||  ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||||  ||||||| |    
T  21140920 actactaaaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttggg 21141019  T
Q  354 aggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagta 409  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  21141020 aggaatttcattttttccgtcactaatttccctcgttaattttgctttttctagta 21141075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 268 - 413
Target Start/End: Complemental strand, 1939386 - 1939241
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    |||||||||||||||| ||| |||||| |||||| |||||||||||| ||||||||||| | |||||||||||||| |||||||||||||||||||||||    
T  1939386 aaaaattagtgagggatattcagtgagagaaaacatgaaatccctctctaattccgtcattaaattttgcgaccaaaaaatttgtgaggaatttcatttt 1939287  T
Q  368 ttccgtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||    
T  1939286 ttcggtcactaatttccctcgctaattttgctttttctagtagtgt 1939241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 252 - 412
Target Start/End: Original strand, 2992594 - 2992754
Alignment:
Q  252 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttg 351  Q
    |||||||||| |||  |||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||  ||||||    
T  2992594 tcactactaaaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttg 2992693  T
Q  352 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    |||||||||| ||||||||| |||||||||||||||||||||| ||||||| |||||||||    
T  2992694 tgaggaattttattttttccatcactaatttccctcgctaattatgcttttcctagtagtg 2992754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 253 - 413
Target Start/End: Complemental strand, 11049910 - 11049750
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  ||||||||||||| || ||||||||||||||||| ||||||| |||| ||||||||||||| ||||||||||||||  |||||||    
T  11049910 cactactaaaaaaacaaaaattagtgagagatatttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaaggaatttgt 11049811  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  11049810 gaggaatttcattttttccgtcactaatttcccttgctaattttgttttttctagtagtgt 11049750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 269 - 413
Target Start/End: Complemental strand, 21990317 - 21990174
Alignment:
Q  269 aaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttt 368  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||| | |||||||||||| |||||||||||||||||||| |||    
T  21990317 aaaattagtgaggaaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaatttttgcgaccaagaaatttgtgaggaatttcat-ttt 21990219  T
Q  369 tccgtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    ||||||| |||||||||||||||||||||||||||||||||||||    
T  21990218 tccgtcattaatttccctcgctaattttgctttttctagtagtgt 21990174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 253 - 412
Target Start/End: Original strand, 2669289 - 2669448
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  ||||||||||||||||||||||||| || ||||||| |||| ||||| ||||||||||||| ||||||||||||||  |||||||    
T  2669289 cactactaaaaaaacaaaaattagtgagggaaatttagtgtggaaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgt 2669388  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  2669389 gaggaatttcatttttttcgtcactaatttccctcgttaattttgctttttctagtagtg 2669448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 253 - 412
Target Start/End: Complemental strand, 16250960 - 16250802
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| ||||||||| |||||||| ||||||| |||||||||||||||||||| |||| |||||| |||||| |||||||||| ||  ||||||||    
T  16250960 cactactaaaaaataaaaa-ttagtgagagaaattttgtgagggaaaacgtgaaatctctctctaattctgtcactaaattttgcgatcatgaaatttgt 16250862  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  16250861 gaggaatttcattttttccgtcactaatttccctcgttaattttgctttttctagtagtg 16250802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 252 - 412
Target Start/End: Complemental strand, 30834120 - 30833960
Alignment:
Q  252 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttg 351  Q
    |||||||||| |||   ||| ||||||| ||||||||||||||||| ||||| |||||||||| |||||| |||| | |||||||||||||| ||||| |    
T  30834120 tcactactaaaaaaactaaatttagtgaaggaaatttagtgagggagaacgtaaaatccctctctaattctgtcattaaattttgcgaccaaaaaattag 30834021  T
Q  352 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30834020 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 30833960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 251 - 415
Target Start/End: Complemental strand, 33250869 - 33250705
Alignment:
Q  251 atcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaattt 350  Q
    ||||||||||| |||  ||||||||||||| || ||||||||||||||||| |||||| ||||| ||||||| ||||| ||||||||||||||  |||||    
T  33250869 atcactactaaaaaaacaaaaattagtgagagatatttagtgagggaaaacatgaaattcctctctaattccatcactaaattttgcgaccaaggaattt 33250770  T
Q  351 gtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgtat 415  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||    
T  33250769 gtgaggaatttcattttttccgtcactaatttccctcgttaattttgtcttttctagtagtgtat 33250705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 251 - 415
Target Start/End: Original strand, 6978257 - 6978419
Alignment:
Q  251 atcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaattt 350  Q
    ||||||||||| |||  |||||||||||||||| ||||||||||  ||||| |||||| ||||| ||||||||||||| ||||||||||||||  |||||    
T  6978257 atcactactaaaaaaacaaaaattagtgagggatatttagtgag--aaaacatgaaattcctctctaattccgtcactaaattttgcgaccaaggaattt 6978354  T
Q  351 gtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgtat 415  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||    
T  6978355 gtgaggaatttcattttttccgtaactaatttccctcgctaattttgcttttcctaatagtgtat 6978419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 268 - 413
Target Start/End: Original strand, 22083833 - 22083978
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||  ||||||||||||||  |||||||||||||||| || ||    
T  22083833 aaaaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcacaaaattttgcgaccaaggaatttgtgaggaattttatgtt 22083932  T
Q  368 ttccgtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    ||||||||| |||||||||| |||||||||||||| ||||||||||    
T  22083933 ttccgtcacaaatttccctccctaattttgcttttcctagtagtgt 22083978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 268 - 412
Target Start/End: Original strand, 12200689 - 12200833
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    |||||||||||||||| ||||||||||||||||  |||||||||||| ||||||| ||||| |||||| |||||||  ||||||||||||||||||||||    
T  12200689 aaaaattagtgagggatatttagtgagggaaaatatgaaatccctctctaattccctcactaaattttacgaccaaggaatttgtgaggaatttcatttt 12200788  T
Q  368 ttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||    
T  12200789 ttccgtcactaatttccctcactaattttgctttttctagcagtg 12200833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 268 - 412
Target Start/End: Original strand, 26939582 - 26939726
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    ||||||||||||| || ||||||||||||||||| |||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  26939582 aaaaattagtgagagatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcatttt 26939681  T
Q  368 ttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||  ||||||||||||||||  ||||||| |||||||||||||||    
T  26939682 ttttgtcactaatttccctcagtaattttactttttctagtagtg 26939726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 253 - 412
Target Start/End: Original strand, 12951688 - 12951847
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| | ||||||||||||||  |||||||    
T  12951688 cactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcattaaattttgcgaccaaggaatttgt 12951787  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||| ||||| || ||||||||||| |||||||||| |||||||||||||| |||||||||    
T  12951788 gagaaattttatgttttccgtcacaaatttccctctctaattttgcttttcctagtagtg 12951847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 252 - 411
Target Start/End: Complemental strand, 27796994 - 27796835
Alignment:
Q  252 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttg 351  Q
    |||||||||| |||  |||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||| |||||||| | |||  |||||     
T  27796994 tcactactaaaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcaatcaaggaattta 27796895  T
Q  352 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagt 411  Q
    |||| ||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  27796894 tgagaaatatcatttttttcgtcactaatttccctcgctaattttgctttttctagtagt 27796835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 250 - 412
Target Start/End: Complemental strand, 18033687 - 18033526
Alignment:
Q  250 aatcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatt 349  Q
    |||||||||||| |||  |||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||| ||||||||||||||  ||||    
T  18033687 aatcactactaaaaaaacaaaaattagtgagggaaatttaatgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatt 18033588  T
Q  350 tgtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    |||||||||||| | | |||||||||| |||||||||| |||||||||||||| |||||||||    
T  18033587 tgtgaggaattt-aatgtttccgtcacaaatttccctccctaattttgcttttcctagtagtg 18033526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 287 - 412
Target Start/End: Complemental strand, 6605621 - 6605496
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    ||||||||||||||| ||||||| |||| |||||||||||||  |||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  6605621 ttagtgagggaaaacatgaaatctctctctaattccgtcactatattttgcgactaagaaatttgtgaggaatttcattttttccgtcactaatttccct 6605522  T
Q  387 cgctaattttgctttttctagtagtg 412  Q
    ||||||||||||||||||||||||||    
T  6605521 cgctaattttgctttttctagtagtg 6605496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 283 - 412
Target Start/End: Original strand, 15448395 - 15448524
Alignment:
Q  283 aaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaattt 382  Q
    ||||||||||||||||||||| |||||||||| ||||||||||| | ||||||||||  ||  |||||||||||||||||||||||||||||||||||||    
T  15448395 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcattaaattttgcgattaaggaatttgtgaggaatttcattttttccgtcactaattt 15448494  T
Q  383 ccctcgctaattttgctttttctagtagtg 412  Q
    ||||||||||||||||||||||||||||||    
T  15448495 ccctcgctaattttgctttttctagtagtg 15448524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 253 - 414
Target Start/End: Original strand, 18492349 - 18492510
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  ||||||||||||| ||||||| || ||||||||||||||||||| || ||||||||||||| |||||||||||||   |||||||    
T  18492349 cactactaaaaaaacaaaaattagtgagagaaattttgtaagggaaaacgtgaaatcccactctaattccgtcactaaattttgcgaccatggaatttgt 18492448  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgta 414  Q
    ||| |||||||||||||||||||||||||| | |||||||||||||||||||||| ||||||    
T  18492449 gagaaatttcattttttccgtcactaatttgcatcgctaattttgctttttctagcagtgta 18492510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 252 - 396
Target Start/End: Original strand, 23281765 - 23281908
Alignment:
Q  252 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttg 351  Q
    |||||||||| |||| ||||||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||||  |||||||    
T  23281765 tcactactaaaaaattaaaaattagggagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccataaaatttg 23281864  T
Q  352 tgaggaatttcattttttccgtcactaatttccctcgctaatttt 396  Q
    |||||||||| ||||||||| ||||||||||||||| ||||||||    
T  23281865 tgaggaattttattttttccatcactaatttccctc-ctaatttt 23281908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 292 - 411
Target Start/End: Original strand, 5360428 - 5360547
Alignment:
Q  292 gagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccctcgcta 391  Q
    |||||||||||| ||||| |||| ||||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  5360428 gagggaaaacgtaaaatctctctctaattccgtcactaaattttgcgaccaaaaaatttgtgaggaattttattttttccgtcactaatttccctcgcta 5360527  T
Q  392 attttgctttttctagtagt 411  Q
    ||||||||||||||||||||    
T  5360528 attttgctttttctagtagt 5360547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 268 - 414
Target Start/End: Complemental strand, 12160990 - 12160845
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    |||||||||||||| | ||||||||||||||||| | |||||||||| ||||| ||||||| |||||| ||| ||| |||||||||||||||||||||||    
T  12160990 aaaaattagtgaggaatatttagtgagggaaaacataaaatccctctctaatttcgtcactaaatttt-cgatcaaaaaatttgtgaggaatttcatttt 12160892  T
Q  368 ttccgtcactaatttccctcgctaattttgctttttctagtagtgta 414  Q
    || |||||||||||||||||||||||||| |||||||||||||||||    
T  12160891 ttacgtcactaatttccctcgctaattttactttttctagtagtgta 12160845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 268 - 412
Target Start/End: Original strand, 9885238 - 9885382
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    |||||||||||| | ||||||||||||||||||| ||||||||||||||||||  |||||| |||||||| ||||| |||||||||||  |||| |||||    
T  9885238 aaaaattagtgacgaaaatttagtgagggaaaacatgaaatccctctttaattttgtcactaaattttgcaaccaacaaatttgtgagagattttatttt 9885337  T
Q  368 ttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    |||||||||||||||||||| || |||||||||||||||||||||    
T  9885338 ttccgtcactaatttccctccctgattttgctttttctagtagtg 9885382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 248 - 412
Target Start/End: Complemental strand, 12351750 - 12351586
Alignment:
Q  248 aaaatcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaa 347  Q
    |||| ||||||||| |||  ||||||||||||||||||||||| |||||||||||||||||  |||| ||||||||||| | ||||||||||| ||  ||    
T  12351750 aaaaacactactaaaaaagtaaaaattagtgagggaaatttagagagggaaaacgtgaaatttctctctaattccgtcattaaattttgcgactaaggaa 12351651  T
Q  348 tttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    |||||||||||||| |||||||||||||||||||||||||  ||||| | |||||||||||||||    
T  12351650 tttgtgaggaattttattttttccgtcactaatttccctccttaattatactttttctagtagtg 12351586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 254 - 394
Target Start/End: Original strand, 12844984 - 12845124
Alignment:
Q  254 actactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtg 353  Q
    |||||||| ||| ||||||||||||||| |||||||| |||||||||||||||||| |||| ||||||||||||| ||||||||||||||  ||||||||    
T  12844984 actactaaaaaagaaaaaattagtgaggaaaatttagagagggaaaacgtgaaatctctctctaattccgtcactaaattttgcgaccaaagaatttgtg 12845083  T
Q  354 aggaatttcattttttccgtcactaatttccctcgctaatt 394  Q
    || ||||| ||||||||||||||||||||||||| ||||||    
T  12845084 agcaattttattttttccgtcactaatttccctccctaatt 12845124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 287 - 415
Target Start/End: Complemental strand, 15961532 - 15961404
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    ||||||||||||||||| |||| ||||| ||||||||| ||| |||||||||| ||| |||||||| |||||||||||||||||||||||||||||||||    
T  15961532 ttagtgagggaaaacgtaaaattcctctctaattccgttactaaattttgcgatcaagaaatttgtaaggaatttcattttttccgtcactaatttccct 15961433  T
Q  387 cgctaattttgctttttctagtagtgtat 415  Q
    || ||||||||||||||||||||||||||    
T  15961432 cgttaattttgctttttctagtagtgtat 15961404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 252 - 412
Target Start/End: Original strand, 18048767 - 18048927
Alignment:
Q  252 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttg 351  Q
    |||||||||| ||| ||||||||||||||||||||||||||||| ||||| |||||||||||  ||||||  ||||| ||||||||||||||  ||||||    
T  18048767 tcactactaaaaaacaaaaaattagtgagggaaatttagtgaggaaaaacatgaaatccctccctaattctctcactaaattttgcgaccaacgaatttg 18048866  T
Q  352 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    |||| ||||| |||||||||||||||||||| |||| ||||||||| |||| |||||||||    
T  18048867 tgagaaattttattttttccgtcactaattttcctctctaattttgtttttcctagtagtg 18048927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 287 - 412
Target Start/End: Original strand, 12499230 - 12499356
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    ||||||||||||||||| |||||||||| ||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  12499230 ttagtgagggaaaacgtaaaatccctctctaactccgtcactaaattttgcgaccaaaaaatttgtgaggaatttcattttttccgtcactactttccct 12499329  T
Q  387 cgctaattttg-ctttttctagtagtg 412  Q
    |||||||||||  ||||||||||||||    
T  12499330 cgctaattttgtttttttctagtagtg 12499356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 287 - 412
Target Start/End: Original strand, 12506559 - 12506685
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    ||||||||||||||||| |||||||||| ||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  12506559 ttagtgagggaaaacgtaaaatccctctctaactccgtcactaaattttgcgaccaaaaaatttgtgaggaatttcattttttccgtcactactttccct 12506658  T
Q  387 cgctaattttg-ctttttctagtagtg 412  Q
    |||||||||||  ||||||||||||||    
T  12506659 cgctaattttgtttttttctagtagtg 12506685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 287 - 412
Target Start/End: Complemental strand, 12509671 - 12509545
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    ||||||||||||||||| |||||||||| ||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  12509671 ttagtgagggaaaacgtaaaatccctctctaactccgtcactaaattttgcgaccaaaaaatttgtgaggaatttcattttttccgtcactactttccct 12509572  T
Q  387 cgctaattttg-ctttttctagtagtg 412  Q
    |||||||||||  ||||||||||||||    
T  12509571 cgctaattttgtttttttctagtagtg 12509545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 253 - 382
Target Start/End: Original strand, 27705402 - 27705531
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||||   |||||||    
T  27705402 cactactaaaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgt 27705501  T
Q  353 gaggaatttcattttttccgtcactaattt 382  Q
    ||||||||||||||||||||| ||||||||    
T  27705502 gaggaatttcattttttccgtaactaattt 27705531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 287 - 406
Target Start/End: Complemental strand, 5192314 - 5192195
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    ||||||||||||||||| |||||||||| ||||||||||||| |||||| |||||||  |||||||||||||||||||||||||| |||||||||| |||    
T  5192314 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttacgaccaaagaatttgtgaggaatttcattttttccttcactaattttcct 5192215  T
Q  387 cgctaattttgctttttcta 406  Q
    ||||||||||||||||||||    
T  5192214 cgctaattttgctttttcta 5192195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 253 - 412
Target Start/End: Original strand, 14886541 - 14886700
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  |||||||||||||| ||||||||||||||||||| | |||||||||| ||||||||||||| |||||| |||||||  ||| |||    
T  14886541 cactactaaaaaaacaaaaattagtgaggaaaatttagtgagggaaaacatcaaatccctctctaattccgtcactaaattttacgaccaaagaatatgt 14886640  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    |||| |||| |||||||| ||||||||||| |||| ||||||||||||||||| ||||||    
T  14886641 gagggattttattttttctgtcactaattttcctccctaattttgctttttctggtagtg 14886700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 253 - 412
Target Start/End: Original strand, 17919516 - 17919675
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  ||||||||||||||||||| || |||||||||  || |||||||||| ||||||||||||| ||||||||||||||  ||||| |    
T  17919516 cactactaaaaaaacaaaaattagtgagggaaatgtaatgagggaaactgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttat 17919615  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    || |||||||||||||||||||| | ||||| ||||||||||||| ||||||||||||||    
T  17919616 gatgaatttcattttttccgtcattgatttctctcgctaattttgttttttctagtagtg 17919675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 254 - 382
Target Start/End: Complemental strand, 343721 - 343593
Alignment:
Q  254 actactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtg 353  Q
    |||||||| |||  |||||||||||||||||||||| ||||||||||||| |||||||||| |||||| |||||| || ||||||||||| |||||||||    
T  343721 actactaaaaaaataaaaattagtgagggaaatttaatgagggaaaacgtaaaatccctctctaattctgtcactaaaatttgcgaccaaaaaatttgtg 343622  T
Q  354 aggaatttcattttttccgtcactaattt 382  Q
    |||||||||||||||| ||||||||||||    
T  343621 aggaatttcattttttacgtcactaattt 343593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 301 - 412
Target Start/End: Original strand, 15509184 - 15509295
Alignment:
Q  301 cgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgctt 400  Q
    |||||||||||||| ||||||||||||| |||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  15509184 cgtgaaatccctctctaattccgtcactaaattttccgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaatttttctt 15509283  T
Q  401 tttctagtagtg 412  Q
    ||||| ||||||    
T  15509284 tttctggtagtg 15509295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 267 - 415
Target Start/End: Original strand, 11530219 - 11530367
Alignment:
Q  267 aaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattt 366  Q
    ||||||||||||||| ||||||||||||||||||| |||||||| ||| ||||||||||||| |||||| |||  || |||||| |||| ||||| || |    
T  11530219 aaaaaattagtgaggaaaatttagtgagggaaaacatgaaatccatctctaattccgtcactaaattttacgattaagaaatttatgagaaattttatgt 11530318  T
Q  367 tttccgtcactaatttccctcgctaattttgctttttctagtagtgtat 415  Q
    |||||||||| |||||||||| |||||||||||||| ||| ||||||||    
T  11530319 tttccgtcacaaatttccctccctaattttgcttttcctaatagtgtat 11530367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 287 - 409
Target Start/End: Original strand, 11077663 - 11077785
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    ||||||||||||||| |||||||||||| |||| |||||||| ||||||||||||||  |||||||||||||||| || ||||||||||| |||||||||    
T  11077663 ttagtgagggaaaacatgaaatccctctctaataccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcacaaatttccct 11077762  T
Q  387 cgctaattttgctttttctagta 409  Q
    | |||||||| ||||||||||||    
T  11077763 ccctaatttttctttttctagta 11077785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 268 - 402
Target Start/End: Complemental strand, 22055756 - 22055622
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    ||||||||||||||||| |||||||||| ||||| |||||||||||| ||||||| ||| ||||||||| ||||||  |||||||||||||||| |||||    
T  22055756 aaaaattagtgagggaagtttagtgaggaaaaacatgaaatccctctctaattccctcattgaattttgtgaccaacgaatttgtgaggaattttatttt 22055657  T
Q  368 ttccgtcactaatttccctcgctaattttgctttt 402  Q
    ||| |||| ||||||||||| ||||||||| ||||    
T  22055656 ttctgtcattaatttccctctctaattttgttttt 22055622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 268 - 412
Target Start/End: Complemental strand, 21691640 - 21691495
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    ||||||||||||||||| ||||| |||| |||||||||||||||||| ||||| ||||||| ||||||||||||||  |||||||||| ||||| |||||    
T  21691640 aaaaattagtgagggaattttagagaggaaaaacgtgaaatccctctctaatttcgtcactaaattttgcgaccaaagaatttgtgagaaattttatttt 21691541  T
Q  368 ttccgtcactaa-tttccctcgctaattttgctttttctagtagtg 412  Q
    || | ||||||| |||||||| |||||||| |||||| ||||||||    
T  21691540 tttcatcactaattttccctctctaattttactttttttagtagtg 21691495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 287 - 416
Target Start/End: Original strand, 28668114 - 28668243
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    |||||||||||||  || |||||||| | ||||||||||| | |||||||||| |||  |||||||||||||||| ||||||||||||||| ||||||||    
T  28668114 ttagtgagggaaattgtaaaatccctttctaattccgtcattaaattttgcgatcaaggaatttgtgaggaattttattttttccgtcactgatttccct 28668213  T
Q  387 cgctaattttgctttttctagtagtgtatc 416  Q
    |||||||||| |||||||||||||||||||    
T  28668214 cgctaattttactttttctagtagtgtatc 28668243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 22 - 218
Target Start/End: Original strand, 6352801 - 6353013
Alignment:
Q  22 gctaaattgtagggaagagtatggacatgagttataaaaggtaacatgatagtttgcaaatacacgtagatatgacatagatacttaaagtagagtatgc 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||  ||||||||||||||||||  | ||| |||||| ||||||||||    
T  6352801 gctaaattgtagggaagagtatggacatgagttataaaaggtaacatgatgttttcaaaatacacgtagatatgatgtggatccttaaattagagtatgc 6352900  T
Q  122 atgtaacatgttattaaattcaagataatattg----------ccatcatc------ttgattaagtcaattctacaatattaatatgttcatatcttac 205  Q
     |||| || | |||||| |||||||| ||||||          ||||||||      |||||| ||||||||||||| | |||||||||||||||| |||    
T  6352901 gtgtatcaaggtattaatttcaagatgatattgctgagttggtccatcatcatcaaattgatttagtcaattctacacttttaatatgttcatatcatac 6353000  T
Q  206 caactataaccgc 218  Q
    || ||||||||||    
T  6353001 cagctataaccgc 6353013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 268 - 405
Target Start/End: Original strand, 9060086 - 9060222
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    |||||||||||| |||||||||| |||||||| | ||||||  |||| |||||| |||||| |||||||||||||| |||||||||||| |||| |||||    
T  9060086 aaaaattagtgaaggaaatttagcgagggaaa-catgaaatttctctctaattctgtcactaaattttgcgaccaaaaaatttgtgagggattttatttt 9060184  T
Q  368 ttccgtcactaatttccctcgctaattttgctttttct 405  Q
    |||||||||||||||| |||  ||||||||||||||||    
T  9060185 ttccgtcactaatttcgctctttaattttgctttttct 9060222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 253 - 414
Target Start/End: Complemental strand, 12680343 - 12680184
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| ||| ||||||||||||||| |||||||| ||||||||||||||||| ||||| ||||||||||| | |||||| ||| |||  |||| ||    
T  12680343 cactactaaaaaagaaaaaattagtgaggaaaatttagagagggaaaacgtgaaattcctctctaattccgtcattaaattttacgatcaaagaattcgt 12680244  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgta 414  Q
    ||| ||||| |||||||||||||||||||| ||||  ||||||| |||||| ||||||||||    
T  12680243 gagcaattttattttttccgtcactaattt-cctccttaatttttcttttt-tagtagtgta 12680184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 287 - 411
Target Start/End: Original strand, 10458778 - 10458902
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    ||||||||| |||| || ||||  |||||||||||| ||||| |||||||| |||||  ||||||||||||| |||||||||||||||||||||||||||    
T  10458778 ttagtgaggaaaaatgtaaaatttctctttaattccatcactaaattttgcaaccaaggaatttgtgaggaaattcattttttccgtcactaatttccct 10458877  T
Q  387 cgctaattttgctttttctagtagt 411  Q
    | |||||||| ||||||||||||||    
T  10458878 cactaattttactttttctagtagt 10458902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 287 - 409
Target Start/End: Original strand, 14872133 - 14872255
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    ||||||||||||||| |||||||||||| ||||||||||||| |||||||  |||||  |||||||||||||||| || ||||||||||| |||||||||    
T  14872133 ttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttggaaccaaggaatttgtgaggaattttatgttttccgtcacaaatttccct 14872232  T
Q  387 cgctaattttgctttttctagta 409  Q
    | |||||||| ||||| ||||||    
T  14872233 ctctaatttttcttttcctagta 14872255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 287 - 371
Target Start/End: Original strand, 13145016 - 13145100
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttcc 371  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||||    
T  13145016 ttagtgagggaaaacgtgaaatctctctttaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttcc 13145100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 330 - 413
Target Start/End: Original strand, 5250196 - 5250279
Alignment:
Q  330 aattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  5250196 aattttgcgaccaagaaatttatgaggaatttcattttttccgtcactaatttccctcgctgatttttctttttctagtagtgt 5250279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 268 - 412
Target Start/End: Original strand, 14036615 - 14036751
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| |||||| |||| | |||||||||| ||   |||||||||||||        |    
T  14036615 aaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattctgtcattaaattttgcgatcatggaatttgtgaggaa--------t 14036706  T
Q  368 ttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||| ||||||||||||||||||||||||| |||||| ||||||||    
T  14036707 ttctgtcactaatttccctcgctaattttcctttttttagtagtg 14036751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 287 - 406
Target Start/End: Complemental strand, 20692936 - 20692817
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    ||||||||||||||||| |||||||||| ||||| ||||||| |||||||||||||| ||| || | | |||||| |||||||||||||||||||| |||    
T  20692936 ttagtgagggaaaacgtaaaatccctctctaatttcgtcactaaattttgcgaccaaaaaacttataaagaattttattttttccgtcactaattttcct 20692837  T
Q  387 cgctaattttgctttttcta 406  Q
    || |||||||| ||||||||    
T  20692836 cgttaattttgttttttcta 20692817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 252 - 366
Target Start/End: Complemental strand, 19175936 - 19175823
Alignment:
Q  252 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttg 351  Q
    |||||||||| |||  ||||||||| |||||||||| |||||||||||| || |||| ||||| ||||||||||||| |||||||||||||| |||||||    
T  19175936 tcactactaaaaaaacaaaaattagagagggaaatt-agtgagggaaaatgtaaaattcctctctaattccgtcactaaattttgcgaccaagaaatttg 19175838  T
Q  352 tgaggaatttcattt 366  Q
    |||||||||||||||    
T  19175837 tgaggaatttcattt 19175823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 287 - 408
Target Start/End: Original strand, 1954895 - 1955015
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    ||||||| ||||||| |||||||| ||| ||||||| ||||  ||||||| |||||| |||||||||| |||||| ||||||||||||||| ||||||||    
T  1954895 ttagtgaaggaaaacatgaaatcc-tctataattccatcacaaaattttgtgaccaagaaatttgtgacgaattttattttttccgtcactcatttccct 1954993  T
Q  387 cgctaattttgctttttctagt 408  Q
      |||||||||||||| |||||    
T  1954994 tcctaattttgcttttcctagt 1955015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 303 - 412
Target Start/End: Original strand, 14772691 - 14772800
Alignment:
Q  303 tgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttt 402  Q
    ||||||| |||| ||||||||||||| |||||| |||||||  |||||||||||||||| || |||| |||||| |||||| ||| ||||||||||||||    
T  14772691 tgaaatctctctctaattccgtcactaaattttacgaccaaggaatttgtgaggaattttatgtttttcgtcacaaatttctctccctaattttgctttt 14772790  T
Q  403 tctagtagtg 412  Q
    |||| |||||    
T  14772791 tctaatagtg 14772800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 268 - 408
Target Start/End: Complemental strand, 12157520 - 12157380
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    ||||| |||||||| |||||||| |||  ||||  |||||||  ||| ||||||||||||| ||||||  ||||||  | ||||| ||| |||| |||||    
T  12157520 aaaaactagtgaggaaaatttagagagcaaaaatatgaaatcattctctaattccgtcactaaattttatgaccaaagattttgtaagggattttatttt 12157421  T
Q  368 ttccgtcactaatttccctcgctaattttgctttttctagt 408  Q
    ||||||||||||||||||||  |||||||||||||||||||    
T  12157420 ttccgtcactaatttccctccttaattttgctttttctagt 12157380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 268 - 382
Target Start/End: Original strand, 5270387 - 5270502
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcga-ccaataaatttgtgaggaatttcattt 366  Q
    ||||||||||||||||| ||||| ||||||||| ||||||| ||||| ||||||||||||| |||||| ||| | || ||||||||||| ||||| ||||    
T  5270387 aaaaattagtgagggaattttagagagggaaaatgtgaaattcctctctaattccgtcactaaattttacgatcaaaaaaatttgtgagaaattttattt 5270486  T
Q  367 tttccgtcactaattt 382  Q
    ||||| |||| |||||    
T  5270487 tttccatcacaaattt 5270502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 330 - 414
Target Start/End: Complemental strand, 8844251 - 8844166
Alignment:
Q  330 aattttgcgaccaataaatttgt-gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgta 414  Q
    ||||||||||||||||||||||| |||  |||| ||||||||||||||||||||||||| || ||||| |||||||||||||||||    
T  8844251 aattttgcgaccaataaatttgttgagagattttattttttccgtcactaatttccctccctgatttttctttttctagtagtgta 8844166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 268 - 413
Target Start/End: Complemental strand, 11431784 - 11431638
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttca--tt 365  Q
    |||| |||||||||||||||||| |||| |||||| || |||||||||||||||||||||| |||||||| |  ||  ||||||||||  |||| |  ||    
T  11431784 aaaatttagtgagggaaatttagagaggaaaaacgcgatatccctctttaattccgtcactaaattttgc-aataaagaatttgtgagagattttatttt 11431686  T
Q  366 ttttccgtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    |||||||||||||||||  ||| |||||||| |||||  |||||||||    
T  11431685 ttttccgtcactaatttttctccctaattttacttttcttagtagtgt 11431638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 287 - 414
Target Start/End: Original strand, 6065451 - 6065578
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    |||||||||||||||  ||||| ||||| |||||  |||| | |||||||||| |||  ||||||||||  |||| ||||||||||||| |||||| |||    
T  6065451 ttagtgagggaaaacaagaaattcctctctaattttgtcattaaattttgcgatcaaagaatttgtgagagattttattttttccgtcattaattttcct 6065550  T
Q  387 cgctaattttgctttttctagtagtgta 414  Q
    | |||||||||||||| ||| |||||||    
T  6065551 ccctaattttgcttttcctaatagtgta 6065578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 291 - 413
Target Start/End: Complemental strand, 10929618 - 10929495
Alignment:
Q  291 tgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtga-ggaatttcattttttccgtcactaatttccctcgc 389  Q
    ||||||||||| ||||||| |||||| ||||||||| | ||||||||||| ||  ||||||||| || |||| |||||||||||||||||||| | || |    
T  10929618 tgagggaaaacatgaaatctctctttgattccgtcattaaattttgcgacaaaggaatttgtgaggggatttaattttttccgtcactaattttcttccc 10929519  T
Q  390 taattttgctttttctagtagtgt 413  Q
    |||||||| |||| | ||||||||    
T  10929518 taattttgattttccaagtagtgt 10929495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 287 - 382
Target Start/End: Original strand, 33547560 - 33547655
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaattt 382  Q
    ||||||||||||||| |||||||||| | |||||  |||||| ||||||||||||||  ||||||||||| |||| |||||||||||| |||||||    
T  33547560 ttagtgagggaaaacatgaaatccctatctaattttgtcactaaattttgcgaccaaagaatttgtgagggattttattttttccgtccctaattt 33547655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 292 - 406
Target Start/End: Complemental strand, 12205305 - 12205191
Alignment:
Q  292 gagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccctcgcta 391  Q
    ||||||||||||||||||||||  ||||||||||||| |||||| |||   |  |||||||||| ||||| || |||||||||||||||||| ||  |||    
T  12205305 gagggaaaacgtgaaatccctcactaattccgtcactaaattttacgatttaagaatttgtgagaaatttaatgttttccgtcactaatttctcttccta 12205206  T
Q  392 attttgctttttcta 406  Q
    ||||| |||||||||    
T  12205205 attttactttttcta 12205191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 271 - 412
Target Start/End: Complemental strand, 13251520 - 13251379
Alignment:
Q  271 aattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttc 370  Q
    |||||||| ||||||||||| |||| |||   |||||||||||| |||||  ||||||||  |||||||  |  ||| |  |||||||||||| |||||     
T  13251520 aattagtgtgggaaatttagcgaggaaaattatgaaatccctctctaattatgtcactgagatttgcgatgaggaaactactgaggaatttcactttttt 13251421  T
Q  371 cgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||||||||||| ||| |||||||||||||||||| |||||    
T  13251420 cgtcactaatttctctctctaattttgctttttctattagtg 13251379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 268 - 415
Target Start/End: Original strand, 16118141 - 16118288
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    |||||||||||||  ||||||| ||||||| ||| ||||||| |||| ||||| ||||| | |||||||||| | |  ||||||| ||  |||| | |||    
T  16118141 aaaaattagtgagaaaaatttaatgagggagaacatgaaatctctctctaatttcgtcattaaattttgcgatcgaggaatttgtaagagattttagttt 16118240  T
Q  368 ttccgtcactaatttccctcgctaattttgctttttctagtagtgtat 415  Q
    ||||||||||||||||| || |||||||| | ||| ||| ||||||||    
T  16118241 ttccgtcactaatttccgtccctaattttacctttcctaatagtgtat 16118288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #77
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 283 - 368
Target Start/End: Complemental strand, 3673262 - 3673177
Alignment:
Q  283 aaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttt 368  Q
    ||||||||||||| |||| || ||||   ||| ||||||||||||| |||||| ||||||| ||||||||||||||||||||||||    
T  3673262 aaatttagtgaggaaaaatgtaaaatttttctctaattccgtcactaaattttacgaccaaaaaatttgtgaggaatttcattttt 3673177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #78
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 287 - 409
Target Start/End: Original strand, 11350196 - 11350315
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    ||||||||||||||| | ||||| |||| |||||| |||||| ||||||||||  ||  |||||||||    |||  | ||||||||||| |||||||||    
T  11350196 ttagtgagggaaaacataaaatcgctctctaattctgtcactaaattttgcgattaaggaatttgtgat---ttttttgttttccgtcacaaatttccct 11350292  T
Q  387 cgctaattttgctttttctagta 409  Q
    | |||||||||||||| ||||||    
T  11350293 ccctaattttgcttttcctagta 11350315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #79
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 373 - 416
Target Start/End: Original strand, 33191180 - 33191223
Alignment:
Q  373 tcactaatttccctcgctaattttgctttttctagtagtgtatc 416  Q
    |||||||||||||||||||||||||||||||||| |||||||||    
T  33191180 tcactaatttccctcgctaattttgctttttctaatagtgtatc 33191223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #80
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 268 - 382
Target Start/End: Original strand, 2396198 - 2396313
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaa-tttcattt 366  Q
    |||||||||| ||| |||||||| |||  ||||||||||||  |||| |  |||||||| | |||||| | |||||  ||||| ||||||| ||| ||||    
T  2396198 aaaaattagtaaggaaaatttagagagcaaaaacgtgaaatttctctctgtttccgtcattaaattttacaaccaaagaatttatgaggaatttttattt 2396297  T
Q  367 tttccgtcactaattt 382  Q
    ||||||||||||||||    
T  2396298 tttccgtcactaattt 2396313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #81
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 324 - 411
Target Start/End: Original strand, 28234036 - 28234123
Alignment:
Q  324 tcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagt 411  Q
    ||||| || ||| ||||||||||||||||||| ||||| ||||||||| ||| ||||||| |||  | ||||||||||| ||| ||||    
T  28234036 tcactaaagtttacgaccaataaatttgtgagaaattttattttttccctcattaatttcgctccttgattttgcttttcctaatagt 28234123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #82
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 333 - 411
Target Start/End: Original strand, 28221652 - 28221730
Alignment:
Q  333 tttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagt 411  Q
    ||||||| ||| |||||| |||| ||||| ||||||||| ||||||||||||||| || |||||| |||| ||| ||||    
T  28221652 tttgcgatcaaaaaatttatgagaaattttattttttccctcactaatttccctccctgattttgtttttcctaatagt 28221730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #83
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 276 - 413
Target Start/End: Complemental strand, 30745853 - 30745718
Alignment:
Q  276 gtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtca 375  Q
    ||||| |||| |||| |||||||||||||||||  |||| ||| ||||||||| |||||| ||| ||| |||||||| |   |||| ||||||||  |||    
T  30745853 gtgagagaaaattagagagggaaaacgtgaaat--ctctctaagtccgtcactaaattttacgatcaaaaaatttgtaaatgattttattttttctatca 30745756  T
Q  376 ctaatttccctcgctaattttgctttttctagtagtgt 413  Q
    ||||||   ||| |||| ||||||||| | ||||||||    
T  30745755 ctaattcttctccctaactttgcttttccaagtagtgt 30745718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #84
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 415
Target Start/End: Complemental strand, 7000950 - 7000879
Alignment:
Q  345 aaatttgtgaggaatttcattttttccg-tcactaatttccctcgctaattttgctttttctagtagtgtat 415  Q
    |||||||||||| |||||||||||| |  ||||| ||||||||| |||||||||||||| ||  ||||||||    
T  7000950 aaatttgtgagggatttcatttttttctatcactgatttccctcactaattttgcttttactgatagtgtat 7000879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #85
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 412
Target Start/End: Complemental strand, 9878597 - 9878515
Alignment:
Q  329 gaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||||| |||||||  ||||||| ||| |||| |||||| || ||||||| |||||||  ||||||||||||||||| |||||    
T  9878597 gaattttacgaccaaagaatttgttagggattttattttt-ccatcactaaattccctccataattttgctttttctattagtg 9878515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #86
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 352
Target Start/End: Complemental strand, 13668137 - 13668054
Alignment:
Q  269 aaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    |||||| |||| |||||||||| ||||||||||||||||| || || ||||||| ||| | |||||| |||  || ||||||||    
T  13668137 aaaattggtgaaggaaatttagagagggaaaacgtgaaattcccctctaattccatcattaaattttacgataaagaaatttgt 13668054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #87
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 257 - 351
Target Start/End: Original strand, 33636964 - 33637058
Alignment:
Q  257 actaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttg 351  Q
    ||||| ||| ||| |||||||||||||| |||||||||||||||| | ||||  |||| ||||| | ||| | |||||| ||| ||| |||||||    
T  33636964 actaaaaaaaaaataattagtgagggaagtttagtgagggaaaacataaaatttctctataatttcatcattaaattttacgatcaagaaatttg 33637058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #88
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 320
Target Start/End: Complemental strand, 3619700 - 3619635
Alignment:
Q  255 ctactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaatt 320  Q
    ||||||||||| |||||||||| |||  |||||||| || | ||||||| |||||||||| |||||    
T  3619700 ctactaataaagaaaaaattagcgagaaaaatttagagatgaaaaacgttaaatccctctctaatt 3619635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #89
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 287 - 355
Target Start/End: Original strand, 16764825 - 16764893
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgag 355  Q
    |||| |||||||||| |||||||||| | ||||||  || |||||||||| ||| || |||||||||||    
T  16764825 ttagagagggaaaacatgaaatccctttctaattctatccctgaattttgtgacaaaaaaatttgtgag 16764893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 129; Significance: 2e-66; HSPs: 76)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 253 - 413
Target Start/End: Complemental strand, 6412212 - 6412052
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  6412212 cactactaaaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctttaattccgtcactaaattttgcgaccaagaaatttgt 6412113  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  6412112 gaggaatttcattttttccgttactaatttccctcgctaattttgctttttctagtagtgt 6412052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 253 - 412
Target Start/End: Complemental strand, 9110134 - 9109975
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  |||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||| |||||||||||||| ||||||||    
T  9110134 cactactaaaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgt 9110035  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9110034 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 9109975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 250 - 412
Target Start/End: Original strand, 12720786 - 12720948
Alignment:
Q  250 aatcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatt 349  Q
    |||||||||||| |||  |||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||  ||||    
T  12720786 aatcactactaaaaaaataaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatt 12720885  T
Q  350 tgtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12720886 tgtgaggaattttattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 12720948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 252 - 413
Target Start/End: Original strand, 6459196 - 6459357
Alignment:
Q  252 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttg 351  Q
    |||||||||| |||  |||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||  ||||||    
T  6459196 tcactactaaaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttg 6459295  T
Q  352 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  6459296 tgaggaatttcattttttccgtcactaatttccctcgctaatttcgctttttctagtagtgt 6459357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 252 - 412
Target Start/End: Original strand, 45839271 - 45839431
Alignment:
Q  252 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttg 351  Q
    |||||||||| |||  |||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||  ||||||    
T  45839271 tcactactaaaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttg 45839370  T
Q  352 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  45839371 tgaggaatttcattttttccgtcactaatttccctcgttaattttgctttttctagtagtg 45839431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 250 - 412
Target Start/End: Original strand, 12161791 - 12161953
Alignment:
Q  250 aatcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatt 349  Q
    |||||||||||| |||  ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||||  |||||    
T  12161791 aatcactactaaaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatt 12161890  T
Q  350 tgtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||||    
T  12161891 tgtgaggaatttcattttttccgtcaataattttcctcgctaattttactttttctagtagtg 12161953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 252 - 413
Target Start/End: Original strand, 23457876 - 23458037
Alignment:
Q  252 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttg 351  Q
    |||||||||| |||  ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||||  |||||||    
T  23457876 tcactactaaaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttg 23457975  T
Q  352 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    |||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||    
T  23457976 tgaggaatttcattttttccgtcaataattttcctcgctaattttactttttctagtagtgt 23458037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 251 - 412
Target Start/End: Original strand, 52183656 - 52183817
Alignment:
Q  251 atcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaattt 350  Q
    ||||||||||| |||  ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||||  ||||||    
T  52183656 atcactactaaaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaattt 52183755  T
Q  351 gtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  52183756 gtgaggaattttattttttccgtcattaatttccctcgttaattttgctttttctagtagtg 52183817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 253 - 413
Target Start/End: Original strand, 15243065 - 15243225
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| |||||||||| |||  |||||||    
T  15243065 cactactaaaaaatcaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctatctaattccgtcactaaattttgcgatcaaggaatttgt 15243164  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    ||||||||||||||||||||||||||||||| |||||| ||||| ||||||||||||||||    
T  15243165 gaggaatttcattttttccgtcactaatttctctcgctgatttttctttttctagtagtgt 15243225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 253 - 412
Target Start/End: Original strand, 22158782 - 22158941
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||||  ||||||||    
T  22158782 cactactaaaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgt 22158881  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    |||||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||    
T  22158882 gaggaatttcattttttctgtcactaatttccctcgctaattttactttttctggtagtg 22158941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 246 - 412
Target Start/End: Complemental strand, 20408326 - 20408160
Alignment:
Q  246 ctaaaatcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaata 345  Q
    ||||| |||||||||  |||  ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||| |||||||||||||       
T  20408326 ctaaagtcactactataaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgttactaaattttgcgaccatgg 20408227  T
Q  346 aatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  20408226 aatttgtgaggaatttcattttttccgtcactaattttcctcgctaattttgctttttctagtagtg 20408160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 253 - 405
Target Start/End: Complemental strand, 18890708 - 18890556
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  ||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||| ||| ||||||||||||| |||||||||    
T  18890708 cactactaaaaaaataaaaattagtgagggaaattttgtgagagaaaacgtgaaatccctctctaattccgttactaaattttgcgaccattaaatttgt 18890609  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttct 405  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  18890608 gaggaatttcattttttccatcactaatttccctcgctaattttgctttttct 18890556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 252 - 412
Target Start/End: Original strand, 22603527 - 22603687
Alignment:
Q  252 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttg 351  Q
    |||||||||| |||  |||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||| |||||||||| |||  ||||||    
T  22603527 tcactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacgtaaaatcgctctctaattccgtcactaaattttgcgatcaaagaatttg 22603626  T
Q  352 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  22603627 tgaggaatttcattttttccatcactaatttcccttgctaattttgctttttctagtagtg 22603687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 253 - 413
Target Start/End: Complemental strand, 17200169 - 17200009
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  |||||||||||||||||||||||||||| ||||  | |||| | ||||||||||||||||| ||||||||||||||| |||||||    
T  17200169 cactactaaaaaaacaaaaattagtgagggaaatttagtgaggaaaaatataaaattcttctttaattccgtcactaaattttgcgaccaatgaatttgt 17200070  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  17200069 gaggaatttcattttttccgtcactgatttccctcgctaattttgttttttctagtagtgt 17200009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 283 - 415
Target Start/End: Complemental strand, 41120866 - 41120734
Alignment:
Q  283 aaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaattt 382  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  41120866 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccatcactaattt 41120767  T
Q  383 ccctcgctaattttgctttttctagtagtgtat 415  Q
    |||||||||||||||||||||||| ||||||||    
T  41120766 ccctcgctaattttgctttttctattagtgtat 41120734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 250 - 412
Target Start/End: Original strand, 29549395 - 29549557
Alignment:
Q  250 aatcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatt 349  Q
    |||||||||||| |||   ||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||| ||||| || |||||    
T  29549395 aatcactactaaaaaaactaaatttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaatttcgcgactaaaaaatt 29549494  T
Q  350 tgtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    |||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  29549495 tgtgagaaattttatttttttcgtcactaatttccctcgctaattttgctttttctagtagtg 29549557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 252 - 413
Target Start/End: Original strand, 14760846 - 14761007
Alignment:
Q  252 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttg 351  Q
    |||||||||| |||  |||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||| ||||||||||||||  ||||||    
T  14760846 tcactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacatgaaatccctcactaattccgtcactaaattttgcgaccaaagaatttg 14760945  T
Q  352 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    |||||||||| || ||||||||||| ||||||||||  ||||||||||||||||||||||||    
T  14760946 tgaggaattttatgttttccgtcacaaatttccctctttaattttgctttttctagtagtgt 14761007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 252 - 413
Target Start/End: Complemental strand, 50845490 - 50845329
Alignment:
Q  252 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttg 351  Q
    |||||||||| |||  ||||||||||| || ||||||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||  ||||||    
T  50845490 tcactactaaaaaaacaaaaattagtgtggaaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttg 50845391  T
Q  352 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    |||||||||| || ||||||||||| |||||||||| |||||||||||||||||||||||||    
T  50845390 tgaggaattttatgttttccgtcacaaatttccctccctaattttgctttttctagtagtgt 50845329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 251 - 415
Target Start/End: Complemental strand, 46339606 - 46339442
Alignment:
Q  251 atcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaattt 350  Q
    ||||||||||| |||  ||||| || ||||||| ||||||| ||||||||| ||||||| |||| ||||||||||||| ||||||||||| ||  |||||    
T  46339606 atcactactaaaaaaacaaaaactaatgagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaattt 46339507  T
Q  351 gtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgtat 415  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  46339506 gtgaggaatttcattttttccgtcactaattttcctcgctaattttgctttttctagtagtgtat 46339442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 252 - 395
Target Start/End: Complemental strand, 41071995 - 41071852
Alignment:
Q  252 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttg 351  Q
    |||||||||| |||  |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||  ||||||    
T  41071995 tcactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttg 41071896  T
Q  352 tgaggaatttcattttttccgtcactaatttccctcgctaattt 395  Q
    |||||||||||||||| ||||||||||||||||||||| |||||    
T  41071895 tgaggaatttcattttctccgtcactaatttccctcgcaaattt 41071852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 253 - 412
Target Start/End: Original strand, 48522498 - 48522657
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  |||||||||||||||| || |||||||||||||| |||||| |||||| |||||||||||| |||||||||||||| ||||||||    
T  48522498 cactactaaaaaaataaaaattagtgagggatatgtagtgagggaaaacatgaaattcctcttaaattccgtcactaaattttgcgaccaaaaaatttgt 48522597  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||| ||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  48522598 gagaaattttattttttctgtcactaattttcctcgctaattttgctttttctagtagtg 48522657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 283 - 413
Target Start/End: Original strand, 4340417 - 4340547
Alignment:
Q  283 aaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaattt 382  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  4340417 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaattt 4340516  T
Q  383 ccctcgctaattttgctttttctagtagtgt 413  Q
    |||| ||||||||||||||||||| ||||||    
T  4340517 cccttgctaattttgctttttctaatagtgt 4340547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 287 - 413
Target Start/End: Complemental strand, 28229580 - 28229454
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    ||||||||||||||||| |||||||||| ||||||| ||||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  28229580 ttagtgagggaaaacgtaaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 28229481  T
Q  387 cgctaattttgctttttctagtagtgt 413  Q
    |||||||||||||||||||||||||||    
T  28229480 cgctaattttgctttttctagtagtgt 28229454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 253 - 414
Target Start/End: Complemental strand, 7181714 - 7181553
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  ||| ||||||||||||||||| || |||||||||||||||||||||| ||||||||||||| ||||||| |||||  |||| |||    
T  7181714 cactactaaaaaaataaatattagtgagggaaattttgtaagggaaaacgtgaaatccctctctaattccgtcactaaattttgtgaccatgaaatatgt 7181615  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgta 414  Q
    |||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  7181614 gaggaattttcttttttccgtcactaatttcccttgctaattttgctttttctagtagtgta 7181553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 283 - 412
Target Start/End: Original strand, 9177110 - 9177239
Alignment:
Q  283 aaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaattt 382  Q
    ||||||||||||| ||||||| |||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  9177110 aaatttagtgaggaaaaacgtaaaatccctctttaatttcgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgttactaattt 9177209  T
Q  383 ccctcgctaattttgctttttctagtagtg 412  Q
    ||||||||||||||| ||||||||||||||    
T  9177210 ccctcgctaattttgttttttctagtagtg 9177239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 268 - 405
Target Start/End: Original strand, 9464098 - 9464235
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||||   ||||||||||||||||||||||    
T  9464098 aaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcatttt 9464197  T
Q  368 ttccgtcactaatttccctcgctaattttgctttttct 405  Q
    ||||||||||||||||| || |||||||| ||||||||    
T  9464198 ttccgtcactaatttccgtcactaattttactttttct 9464235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 251 - 412
Target Start/End: Original strand, 41752411 - 41752572
Alignment:
Q  251 atcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaattt 350  Q
    ||||||||| | |||  |||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||  |||||    
T  41752411 atcactactgaaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaattt 41752510  T
Q  351 gtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||  ||||| |||||||||||||||||||||| || ||||||||||||||||||||||||    
T  41752511 gtgaaaaattttattttttccgtcactaatttccgtcactaattttgctttttctagtagtg 41752572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 268 - 412
Target Start/End: Original strand, 17661045 - 17661189
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||| ||||| |||||||||||||  ||||||||||||||||| |||||    
T  17661045 aaaaattagtgagggaaattttgtgagggaaaacgtgaaattcctctctaattccatcactaaattttgcgaccatgaaatttgtgaggaattttatttt 17661144  T
Q  368 ttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||||||||||||||| ||| ||||||||||||||||| |||||    
T  17661145 ttccgtcactaatttccgtcgttaattttgctttttctaatagtg 17661189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 253 - 413
Target Start/End: Complemental strand, 38531329 - 38531169
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  ||||||||||||||||||||||| |||||||||||||||||| |||| ||||||| ||||| ||||||||||| ||  |||||||    
T  38531329 cactactaaaaaagtaaaaattagtgagggaaatttagagagggaaaacgtgaaatctctctctaattccatcactaaattttgcgactaaggaatttgt 38531230  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    ||||||||| ||||||||||||||| ||||||||| |||||||| ||||||||||||||||    
T  38531229 gaggaattttattttttccgtcacttatttccctccctaattttactttttctagtagtgt 38531169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 287 - 413
Target Start/End: Original strand, 46790014 - 46790140
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    ||||||||||||||||| |||||||| | ||||||||||| | ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  46790014 ttagtgagggaaaacgtaaaatccctttctaattccgtcattaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 46790113  T
Q  387 cgctaattttgctttttctagtagtgt 413  Q
    |||||||||||||||||||||||||||    
T  46790114 cgctaattttgctttttctagtagtgt 46790140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 253 - 414
Target Start/End: Complemental strand, 18895059 - 18894898
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  |||||||||||||| ||||||||||||||||||| |||||||||||| ||||| ||||||| ||||||||||||||  ||| |||    
T  18895059 cactactaaaaaaacaaaaattagtgaggaaaatttagtgagggaaaacatgaaatccctctctaatttcgtcactaaattttgcgaccaaagaatatgt 18894960  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgta 414  Q
    |||| |||| ||||||| |||||||||||| ||||||||||||||||||| |||||||||||    
T  18894959 gaggtattttatttttttcgtcactaattttcctcgctaattttgcttttcctagtagtgta 18894898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 268 - 412
Target Start/End: Complemental strand, 9985471 - 9985327
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    ||||||||||||||||||||| |||||| ||||||| |||||||||| ||||||||||| | |||||| |||||||  |||||||||||||||| |||||    
T  9985471 aaaaattagtgagggaaattttgtgaggaaaaacgtaaaatccctctctaattccgtcaataaattttacgaccaaagaatttgtgaggaatttgatttt 9985372  T
Q  368 ttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||    
T  9985371 ttccgtcactaatttcccttgctaattttgttttttctagtagtg 9985327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 252 - 411
Target Start/End: Complemental strand, 9259343 - 9259184
Alignment:
Q  252 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttg 351  Q
    |||||||||| |||  ||| ||||||||||||||||| |||||||||||||||||||| |||| ||||||||||||| |||||||||||||  |||||||    
T  9259343 tcactactaaaaaaacaaatattagtgagggaaattttgtgagggaaaacgtgaaatctctctctaattccgtcactaaattttgcgaccatgaaatttg 9259244  T
Q  352 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagt 411  Q
    |||| |||||  ||||||||||||||||||| ||||| |||||||| |||||||||||||    
T  9259243 tgagaaattttcttttttccgtcactaattttcctcgttaattttgttttttctagtagt 9259184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 269 - 412
Target Start/End: Complemental strand, 50092441 - 50092298
Alignment:
Q  269 aaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttt 368  Q
    |||| ||| ||| ||||||| |||||||||||| |||||||||||| ||||||||||||| ||||||| || ||  ||||||||||||||||||||||||    
T  50092441 aaaaatagggagagaaattttgtgagggaaaacatgaaatccctctctaattccgtcactaaattttgtgatcatgaaatttgtgaggaatttcattttt 50092342  T
Q  369 tccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    |||||||||||||||||||||||||||| |||||||||||||||    
T  50092341 tccgtcactaatttccctcgctaatttttctttttctagtagtg 50092298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 287 - 413
Target Start/End: Original strand, 19865258 - 19865384
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    ||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||  |||||||||| |||||||||||||||||||||||||| |||    
T  19865258 ttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagaaatttcattttttccgtcactaattttcct 19865357  T
Q  387 cgctaattttgctttttctagtagtgt 413  Q
    |||||||||| ||||||||||||||||    
T  19865358 cgctaattttactttttctagtagtgt 19865384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 252 - 413
Target Start/End: Original strand, 46865222 - 46865383
Alignment:
Q  252 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttg 351  Q
    |||||||||| |||  |||||||||||||||||||| || |||||| |||||||||||||||| ||||||| | ||| ||||||||| |||| |||||||    
T  46865222 tcactactaaaaaagcaaaaattagtgagggaaattcagagagggagaacgtgaaatccctctctaattccattactaaattttgcggccaagaaatttg 46865321  T
Q  352 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    ||||| |||| ||||||||||||||||||||||||| ||| |||| ||||||||||||||||    
T  46865322 tgagggattttattttttccgtcactaatttccctccctagtttttctttttctagtagtgt 46865383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 252 - 413
Target Start/End: Original strand, 51973403 - 51973564
Alignment:
Q  252 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttg 351  Q
    |||||||||| |||  ||| |||| |||||||||||| ||||||||||| |||||||  |||| ||||||||||||| |||||||||||||   | |||     
T  51973403 tcactactaaaaaaacaaatattaatgagggaaattttgtgagggaaaatgtgaaatttctctctaattccgtcactaaattttgcgaccatagatttta 51973502  T
Q  352 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  51973503 tgaggaatttcattttttccgttactaatttccctcgctaattttgctttttctagtagtgt 51973564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 283 - 406
Target Start/End: Complemental strand, 46786087 - 46785964
Alignment:
Q  283 aaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaattt 382  Q
    ||||||||||||||||||||| |||||||||| ||||||||||| | ||||||||||||||  || ||||||| ||||||||||||||||||||||||||    
T  46786087 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcattaaattttgcgaccaaggaacttgtgagaaatttcattttttccgtcactaattt 46785988  T
Q  383 ccctcgctaattttgctttttcta 406  Q
    ||||||||||||||||||||||||    
T  46785987 ccctcgctaattttgctttttcta 46785964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 252 - 413
Target Start/End: Complemental strand, 20290480 - 20290320
Alignment:
Q  252 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttg 351  Q
    |||||||||| |||  ||||||||||||| ||||||| ||||| ||||||||||||||  ||| ||||||||||||| |||||| || |||  |||||||    
T  20290480 tcactactaaaaaaacaaaaattagtgagagaaattttgtgagagaaaacgtgaaatcattctctaattccgtcactaaattttacggccatgaaatttg 20290381  T
Q  352 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||    
T  20290380 tgaggaatttcat-ttttccgtcactaatttccctcgctaattttactttttctagcagtgt 20290320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 268 - 412
Target Start/End: Original strand, 19081723 - 19081867
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||| |||||| |||||| |||||| |||||||  |||||||||| ||||| |||||    
T  19081723 aaaaattagtgagggaattttagagagggaaaacgtgaaatccctctctaattctgtcactaaattttacgaccaaggaatttgtgagaaattttatttt 19081822  T
Q  368 ttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    |||| ||||||||||||||| |||||||| |||||| ||||||||    
T  19081823 ttccatcactaatttccctctctaattttactttttttagtagtg 19081867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 268 - 412
Target Start/End: Original strand, 19129611 - 19129755
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||| |||||| |||||| |||||| |||||||  |||||||||| ||||| |||||    
T  19129611 aaaaattagtgagggaattttagagagggaaaacgtgaaatccctctctaattctgtcactaaattttacgaccaaggaatttgtgagaaattttatttt 19129710  T
Q  368 ttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    |||| ||||||||||||||| |||||||| |||||| ||||||||    
T  19129711 ttccatcactaatttccctctctaattttactttttttagtagtg 19129755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 253 - 412
Target Start/End: Original strand, 7830011 - 7830170
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  |||||||||||||||||||||||||||||||||| |||||||||||  ||||| ||||||| ||||||||||||||  |||||||    
T  7830011 cactactaaaaaaataaaaattagtgagggaaatttagtgagggaaaacatgaaatccctccctaatttcgtcactaaattttgcgaccaaggaatttgt 7830110  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||| ||||| || |||||| |||  |||||||||| |||||||||||||| |||||||||    
T  7830111 gagaaattttatgttttccatcataaatttccctccctaattttgcttttcctagtagtg 7830170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 287 - 412
Target Start/End: Complemental strand, 8941119 - 8940994
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    ||||||||||||||||| |||| ||||| |||||||||| || |||||| ||| |||  |||||||||| ||||||||||||||||||||||||||||||    
T  8941119 ttagtgagggaaaacgtaaaattcctctctaattccgtcgctaaattttacgatcaaggaatttgtgagaaatttcattttttccgtcactaatttccct 8941020  T
Q  387 cgctaattttgctttttctagtagtg 412  Q
    ||||||||||||||||||||||||||    
T  8941019 cgctaattttgctttttctagtagtg 8940994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 248 - 412
Target Start/End: Original strand, 12989827 - 12989991
Alignment:
Q  248 aaaatcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaa 347  Q
    |||||||| ||||| |||  ||||||||||||||||||||| | |||||||||||||||||| |||  |||||| |||||| || |||||||||||  ||    
T  12989827 aaaatcacaactaaaaaagcaaaaattagtgagggaaattttgagagggaaaacgtgaaatctctccctaattcagtcactaaactttgcgaccaaggaa 12989926  T
Q  348 tttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    |||||||| ||||| |||||||||||||| |||||| ||| ||||||||||||||| ||||||||    
T  12989927 tttgtgagaaattttattttttccgtcaccaatttctctctctaattttgctttttttagtagtg 12989991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 268 - 412
Target Start/End: Original strand, 13102311 - 13102455
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    |||||||||||||||||||||||||||||||||| | ||||| || | ||||||||||||| ||||||||||||||  ||||||||| |||||| || ||    
T  13102311 aaaaattagtgagggaaatttagtgagggaaaacataaaatctctttctaattccgtcactaaattttgcgaccaaggaatttgtgatgaattttatgtt 13102410  T
Q  368 ttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||||||| ||||||||||  ||||||||||||| |||||||||    
T  13102411 ttccgtcacaaatttccctccttaattttgcttttcctagtagtg 13102455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 252 - 408
Target Start/End: Complemental strand, 16913736 - 16913581
Alignment:
Q  252 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttg 351  Q
    |||||||||| ||| | |||||||||||||||||||||| |||||||||| |||||||||||| ||||||||| | | |||||| |||| ||  ||||||    
T  16913736 tcactactaaaaaa-acaaaattagtgagggaaatttagagagggaaaacatgaaatccctctctaattccgttattaaattttacgactaaggaatttg 16913638  T
Q  352 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagt 408  Q
    |||||||||| ||||||||||||||||||||||||  |||||||||||||| |||||    
T  16913637 tgaggaattttattttttccgtcactaatttcccttcctaattttgcttttcctagt 16913581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 273 - 382
Target Start/End: Original strand, 32046876 - 32046985
Alignment:
Q  273 ttagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccg 372  Q
    |||||||||||||| |||||||||||||||| ||||| |||| |||||||| |||| |||||||||||||| ||||||||||||||||||||||||||||    
T  32046876 ttagtgagggaaatatagtgagggaaaacgtaaaatctctctctaattccgacactaaattttgcgaccaagaaatttgtgaggaatttcattttttccg 32046975  T
Q  373 tcactaattt 382  Q
    ||||||||||    
T  32046976 tcactaattt 32046985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 287 - 412
Target Start/End: Complemental strand, 13308945 - 13308820
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    ||||||||| ||||| |||||||||||| ||||| | ||||| |||||||||||||||||||||||||||||||| |||||||| | |||||||||||||    
T  13308945 ttagtgaggaaaaacatgaaatccctctctaatttcatcactaaattttgcgaccaataaatttgtgaggaattttattttttcggacactaatttccct 13308846  T
Q  387 cgctaattttgctttttctagtagtg 412  Q
    | ||||||||| |||| |||||||||    
T  13308845 ctctaattttgtttttcctagtagtg 13308820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 252 - 413
Target Start/End: Complemental strand, 12370101 - 12369950
Alignment:
Q  252 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttg 351  Q
    |||||||||| |||  |||||||||||||||||||||||| ||||||||| | |||||| ||| ||||||||||||| |||||||||||||             
T  12370101 tcactactaaaaaaacaaaaattagtgagggaaatttagtaagggaaaacataaaatccttctctaattccgtcactaaattttgcgacca--------- 12370011  T
Q  352 tgaggaatttca-ttttttccgtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
      | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12370010 --aagaatttcatttttttccgtcactaatttccctcgctaattttgctttttctagtagtgt 12369950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 253 - 412
Target Start/End: Complemental strand, 22789750 - 22789593
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  ||||||||||||||||||||||| |||||||||||||||||| || | |||||| |||||| |||||||||||||   |||||||    
T  22789750 cactactaaaaaagcaaaaattagtgagggaaatttagagagggaaaacgtgaaatctctatctaattcagtcactaaattttgcgaccatggaatttgt 22789651  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||| ||||| || ||||||||||||||||| |||| ||||||||  ||||| ||||||||    
T  22789650 gagaaattttatgttttccgtcactaattttcctccctaatttt--tttttttagtagtg 22789593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 304 - 411
Target Start/End: Complemental strand, 25788105 - 25787998
Alignment:
Q  304 gaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgcttttt 403  Q
    ||||||||||| ||||||||||||| |||||||||||||   ||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||    
T  25788105 gaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaattttcttttttccgtcactaattttcctcgctaattttgcttttt 25788006  T
Q  404 ctagtagt 411  Q
    ||||||||    
T  25788005 ctagtagt 25787998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 268 - 413
Target Start/End: Original strand, 41063192 - 41063337
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    |||||||||||||| ||||||||||||| ||||| | ||||| |||| ||||||||||||| |||||||||| |||  ||| ||||||| |||| |||||    
T  41063192 aaaaattagtgaggaaaatttagtgaggaaaaacataaaatctctctctaattccgtcactaaattttgcgatcaaagaatatgtgagggattttatttt 41063291  T
Q  368 ttccgtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    ||||||||||||||| |||   ||||||| ||||||||||||||||    
T  41063292 ttccgtcactaattttccttcttaattttactttttctagtagtgt 41063337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 268 - 412
Target Start/End: Original strand, 20580904 - 20581049
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttca-ttt 366  Q
    ||||||||||||| ||| ||||| ||||||||||||||||||||||| ||||| ||| | | ||||||||||| ||  |||||||||| ||||| | |||    
T  20580904 aaaaattagtgagagaattttagagagggaaaacgtgaaatccctctctaatttcgtaattaaattttgcgactaaggaatttgtgagaaatttaatttt 20581003  T
Q  367 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||| ||||||||||||||| |||||||| |||||| ||||||||    
T  20581004 tttccatcactaatttccctctctaattttactttttttagtagtg 20581049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 253 - 413
Target Start/End: Original strand, 13195563 - 13195723
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  ||||||| ||||||||||||||| ||||||||| |  |||||||||| |||||| |||||| ||||||||| || |  |||| ||    
T  13195563 cactactaaaaaagcaaaaatttgtgagggaaatttagagagggaaaatgcaaaatccctctctaattctgtcactaaattttgcgtcccaggaattcgt 13195662  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    ||||||||| |  |||||| |||||||| |||||| |||||||||| ||||||||||||||    
T  13195663 gaggaattttaacttttccatcactaatctccctccctaattttgcattttctagtagtgt 13195723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 268 - 380
Target Start/End: Complemental strand, 13523105 - 13522993
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||  |||||||||| ||||  |||||    
T  13523105 aaaaattagtgagggaattttagagagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagaaattatatttt 13523006  T
Q  368 ttccgtcactaat 380  Q
    |||| | ||||||    
T  13523005 ttccataactaat 13522993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 268 - 411
Target Start/End: Complemental strand, 17734098 - 17733954
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaatttt-gcgaccaataaatttgtgaggaatttcattt 366  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||  ||||||| ||| | |||||| |||||||| |||||||||||  |||| || |    
T  17734098 aaaaattagtgagggaaatttagtgagggaaaacatgaaatctctcgctaattccatcattaaatttttgcgaccaagaaatttgtgagagattttatct 17733999  T
Q  367 tttccgtcactaatttccctcgctaattttgctttttctagtagt 411  Q
    ||||||||||||| ||  ||| |||||||||||||| ||||||||    
T  17733998 tttccgtcactaaattttctccctaattttgcttttcctagtagt 17733954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 268 - 413
Target Start/End: Complemental strand, 18788054 - 18787912
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    ||||||||||||||||||||||  |||||||||||||| |||  ||| |||||  |||||| |||||||||||||| ||||||  |||| |||| |||||    
T  18788054 aaaaattagtgagggaaatttaaagagggaaaacgtgacatcaatctctaatt--gtcactaaattttgcgaccaaaaaatttaggagggattttatttt 18787957  T
Q  368 ttccgtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    ||| ||||||||||||| || |||||||||||||||| ||||||||    
T  18787956 ttc-gtcactaatttccatccctaattttgctttttcaagtagtgt 18787912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 268 - 402
Target Start/End: Complemental strand, 30928522 - 30928388
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    |||||||||||||| ||||||| |||| |||||| ||||||  |||| ||||||  ||||| ||||||||||||||  ||||||| ||  |||| |||||    
T  30928522 aaaaattagtgaggaaaatttactgagtgaaaacatgaaatttctctctaattctctcactaaattttgcgaccaaggaatttgttagagattttatttt 30928423  T
Q  368 ttccgtcactaatttccctcgctaattttgctttt 402  Q
    |||||||||||||||||||| ||||||||||||||    
T  30928422 ttccgtcactaatttccctctctaattttgctttt 30928388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 275 - 382
Target Start/End: Complemental strand, 12174903 - 12174796
Alignment:
Q  275 agtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtc 374  Q
    ||||||||| ||||||||||||||||| |||||||| ||| ||||||||||||| ||||||||||| ||  |||||||||||||||| |||||||| ||     
T  12174903 agtgagggatatttagtgagggaaaacatgaaatccttctctaattccgtcactaaattttgcgacgaaggaatttgtgaggaattttattttttctgtt 12174804  T
Q  375 actaattt 382  Q
    ||||||||    
T  12174803 actaattt 12174796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 268 - 413
Target Start/End: Original strand, 11917781 - 11917925
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    |||||||||||||  || ||||| ||||||||||||||| ||||| | ||||||||||||| ||||||||||||||  ||||||||||  ||||  ||||    
T  11917781 aaaaattagtgagataagtttagagagggaaaacgtgaactccctttctaattccgtcactaaattttgcgaccaaataatttgtgagatattttgtttt 11917880  T
Q  368 ttccgtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    || ||||||| ||||||||| |||||||| ||||| ||| ||||||    
T  11917881 tt-cgtcactgatttccctctctaatttttcttttcctaatagtgt 11917925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 287 - 379
Target Start/End: Original strand, 41359001 - 41359094
Alignment:
Q  287 ttagtgagggaaaacgtgaaa-tccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaa 379  Q
    ||||||||||||||| | ||| ||||||| ||||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  41359001 ttagtgagggaaaacataaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaa 41359094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 253 - 413
Target Start/End: Complemental strand, 29093713 - 29093553
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  ||||||||||||||||||||||| || |||||| || |||| ||||| ||||||| ||| | ||||||||||  ||  || ||||    
T  29093713 cactactaaaaaagtaaaaattagtgagggaaatttagagatggaaaatgtaaaattcctctctaattccatcattaaattttgcgattaaggaacttgt 29093614  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    ||||||||| |||||||| |||  || ||||||||  ||||||| ||||||||||||||||    
T  29093613 gaggaattttattttttcggtccttagtttccctccttaattttactttttctagtagtgt 29093553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 268 - 407
Target Start/End: Original strand, 26825235 - 26825374
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    |||||||||  |||||| ||||| ||||||||||||||||| ||||| ||||||||||||| |||||| ||| |||  ||||||||||| |  | |||||    
T  26825235 aaaaattagcaagggaattttagagagggaaaacgtgaaattcctctctaattccgtcactaaattttacgatcaaagaatttgtgagggaagttatttt 26825334  T
Q  368 ttccgtcactaatttccctcgctaattttgctttttctag 407  Q
    ||||||||||||||| | ||  ||| ||||||||||||||    
T  26825335 ttccgtcactaattttcttccataactttgctttttctag 26825374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 316 - 413
Target Start/End: Complemental strand, 27253951 - 27253854
Alignment:
Q  316 taattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    ||||||||||||| |||||||||||||   |||||||||| ||||| ||||||||||||| |||||| |||| |||||||| ||||||||||||||||    
T  27253951 taattccgtcactaaattttgcgaccatggaatttgtgagaaattttattttttccgtcattaattttcctccctaatttttctttttctagtagtgt 27253854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 268 - 408
Target Start/End: Complemental strand, 16258630 - 16258490
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    |||||||||||||| |||||||| |||| ||||||||||| |||||| ||||||||||||| |||||||| |||||  ||| ||||||  |||| ||| |    
T  16258630 aaaaattagtgaggaaaatttagagaggaaaaacgtgaaaaccctctataattccgtcactaaattttgcaaccaaggaatctgtgagatattttattct 16258531  T
Q  368 ttccgtcactaatttccctcgctaattttgctttttctagt 408  Q
    ||||| |||||| || | ||  ||||||||||||| |||||    
T  16258530 ttccgccactaaattacatccttaattttgcttttcctagt 16258490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 287 - 412
Target Start/End: Complemental strand, 12806963 - 12806836
Alignment:
Q  287 ttagtgagggaaaa-cgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgag-gaatttcattttttccgtcactaatttcc 384  Q
    |||||||||||||| | |||||||||||| ||||||||||||| |||||| ||||||| ||||||||||| || ||   ||||||| |||||||||||||    
T  12806963 ttagtgagggaaaaacttgaaatccctctataattccgtcactaaattttacgaccaagaaatttgtgagagatttattttttttctgtcactaatttcc 12806864  T
Q  385 ctcgctaattttgctttttctagtagtg 412  Q
    ||| ||||| |||||||| ||| |||||    
T  12806863 ctccctaatattgcttttcctaatagtg 12806836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 268 - 339
Target Start/End: Complemental strand, 14486776 - 14486705
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcga 339  Q
    |||||||||||||| |||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||    
T  14486776 aaaaattagtgaggaaaatttagagagggaaaacgtgaaatctctctctaattccgtcactgaattttgcga 14486705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 268 - 402
Target Start/End: Original strand, 6775882 - 6776015
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    |||||||| |||| |||||||||||||  ||||| | |||| ||||| |||||||||  || | |||||| |||||  ||||||||||| |||| |||||    
T  6775882 aaaaattaatgagagaaatttagtgagaaaaaacttaaaattcctctctaattccgttgctaagttttgcaaccaaagaatttgtgagggattttatttt 6775981  T
Q  368 ttccgtcactaatttccctcgctaattttgctttt 402  Q
    |||| ||||| ||||||||| ||||||||||||||    
T  6775982 ttccatcact-atttccctctctaattttgctttt 6776015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 283 - 412
Target Start/End: Original strand, 39748943 - 39749072
Alignment:
Q  283 aaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaattt 382  Q
    ||||||||||| ||||||| ||||||||| ||  |||| ||||||| |||||||||| |||  || ||| |||  ||||  |||||||||||||||||||    
T  39748943 aaatttagtgaaggaaaacatgaaatccccctcaaatttcgtcactaaattttgcgatcaaacaaattgcgagagatttttttttttccgtcactaattt 39749042  T
Q  383 ccctcgctaattttgctttttctagtagtg 412  Q
    | |||  ||||||||||||| |||||||||    
T  39749043 cgctccttaattttgcttttcctagtagtg 39749072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 287 - 382
Target Start/End: Complemental strand, 9882162 - 9882070
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaattt 382  Q
    ||||||||| ||||| | |||| ||||| ||||||||||||| ||||||||||   | |||||||||||| |||| ||||||||||||||||||||    
T  9882162 ttagtgaggaaaaacattaaattcctctctaattccgtcactaaattttgcga---agaaatttgtgagggattttattttttccgtcactaattt 9882070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 268 - 382
Target Start/End: Original strand, 52621149 - 52621263
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    |||||||||||||| ||||||||||||| ||||| |||||| | ||  ||||||| ||||| ||||||  ||| ||  ||||| ||||  |||| |||||    
T  52621149 aaaaattagtgaggaaaatttagtgaggaaaaacatgaaattcttcactaattccatcactaaattttatgactaaataatttatgagagattttatttt 52621248  T
Q  368 ttccgtcactaattt 382  Q
    |||| ||||||||||    
T  52621249 ttccatcactaattt 52621263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 288 - 412
Target Start/End: Complemental strand, 45919028 - 45918904
Alignment:
Q  288 tagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatt-ttttccgtcactaatttccct 386  Q
    |||||||||| ||| | |||||||||| |||||| || ||| |||||||| |||||  ||||| ||||| |||||||| ||||||||||| | ||| |||    
T  45919028 tagtgagggataacatcaaatccctctctaattctgttactaaattttgcaaccaaggaatttatgagggatttcatttttttccgtcacaagttttcct 45918929  T
Q  387 cgctaattttgctttttctagtagtg 412  Q
    | |||||||||| ||| |||| ||||    
T  45918928 c-ctaattttgcatttcctagcagtg 45918904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 283 - 387
Target Start/End: Original strand, 30673504 - 30673608
Alignment:
Q  283 aaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaattt 382  Q
    ||||||||||||||||||| |||||||||||| ||||||  | ||| ||||||  || ||| |||||||||| | |||| ||||  ||| ||||||||||    
T  30673504 aaatttagtgagggaaaacatgaaatccctctctaattctattactaaattttatgagcaaaaaatttgtgaaggattttatttcctccttcactaattt 30673603  T
Q  383 ccctc 387  Q
     ||||    
T  30673604 tcctc 30673608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 287 - 398
Target Start/End: Original strand, 49881058 - 49881168
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    ||||||||||| ||| |||||||||||| |||| | || ||| ||||||| ||||||  ||||| |||   |||| ||||||||||||||||| || |||    
T  49881058 ttagtgagggataacatgaaatccctctctaatcctgttactaaattttgtgaccaaggaatttatgaaagattttattttttccgtcactaactttcct 49881157  T
Q  387 cgctaattttgc 398  Q
    | ||||||||||    
T  49881158 c-ctaattttgc 49881168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 382
Target Start/End: Complemental strand, 25687424 - 25687310
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    ||||||||  ||| ||||||||| || ||||||| | | |||||||| ||||||| ||||| |||||||| |  |  ||||| |||||||||||||||||    
T  25687424 aaaaattaacgagagaaatttagagaaggaaaacattacatccctctctaattccttcactaaattttgccaaaagaaaattggtgaggaatttcatttt 25687325  T
Q  368 ttccgtcactaattt 382  Q
     |  |||||||||||    
T  25687324 gtttgtcactaattt 25687310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 253 - 309
Target Start/End: Complemental strand, 13295095 - 13295039
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatc 309  Q
    ||||||||| |||  |||||||||| | |||||||||| ||||||||||||||||||    
T  13295095 cactactaaaaaagcaaaaattagtaacggaaatttagagagggaaaacgtgaaatc 13295039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 128; Significance: 6e-66; HSPs: 68)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 253 - 412
Target Start/End: Original strand, 22486374 - 22486533
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||  |||||||    
T  22486374 cactactaaaaaaacaaaaattagtgagggaaatttagtgacggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgt 22486473  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22486474 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 22486533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 252 - 413
Target Start/End: Original strand, 11036487 - 11036647
Alignment:
Q  252 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttg 351  Q
    |||||||||| ||| | |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||||  |||||||    
T  11036487 tcactactaaaaaa-acaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttg 11036585  T
Q  352 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  11036586 tgaggaatttcattttttccgtcactaatttcccttgctaattttgctttttctagtagtgt 11036647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 253 - 413
Target Start/End: Original strand, 20174000 - 20174160
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||||  ||||||||    
T  20174000 cactactaaaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgt 20174099  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||    
T  20174100 gaggaatttcattttttccgtcactaatttccctcgctaattttgcttttcctggtagtgt 20174160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 251 - 415
Target Start/End: Original strand, 20429443 - 20429607
Alignment:
Q  251 atcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaattt 350  Q
    ||||||||||| |||  ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||| ||||||  ||||||    
T  20429443 atcactactaaaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttacgaccatgaaattt 20429542  T
Q  351 gtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgtat 415  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  20429543 gtgaggaatttcattttttccgtcactaatttcccttgttaattttgctttttctagtagtgtat 20429607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 252 - 412
Target Start/End: Original strand, 24605817 - 24605977
Alignment:
Q  252 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttg 351  Q
    |||||||||| |||| |||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||| ||||||||||||||  ||||||    
T  24605817 tcactactaaaaaatcaaaaattagtgaggaaaatttagtgagggaaaacgtgaaatctctctctaattccgtcactaaattttgcgaccaaagaatttg 24605916  T
Q  352 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  24605917 tgaggaatttcattttttccgtcactaatttccctcgctgatttttctttttctagtagtg 24605977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 268 - 412
Target Start/End: Original strand, 28800873 - 28801017
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  28800873 aaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcatttt 28800972  T
Q  368 ttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||| |||||||||||||||||||||||||||||||||||||||||    
T  28800973 ttctgtcactaatttccctcgctaattttgctttttctagtagtg 28801017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 253 - 412
Target Start/End: Complemental strand, 23577348 - 23577189
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| ||||||||||||||  |||||||    
T  23577348 cactactaaaaaattaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctatctaattccgtcactaaattttgcgaccaaggaatttgt 23577249  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||||||||||||||||||||||||||||| |||||| ||||| |||||||||||||||    
T  23577248 gaggaatttcattttttccgtcactaatttctctcgctgatttttctttttctagtagtg 23577189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 253 - 412
Target Start/End: Complemental strand, 31425670 - 31425511
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||   |||||||    
T  31425670 cactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccacagaatttgt 31425571  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  31425570 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctaatagtg 31425511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 253 - 412
Target Start/End: Original strand, 23232019 - 23232178
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  |||||||||||||||| ||||||||||||||||| |||||||||| | ||||||||||||| ||||||||||||||  |||||||    
T  23232019 cactactaaaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctttctaattccgtcactaaattttgcgaccaaagaatttgt 23232118  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  23232119 gaggaatttcattttttccgtcactaatttccctctctaattttgctttttctagtagtg 23232178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 253 - 412
Target Start/End: Original strand, 27805998 - 27806157
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  |||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||| |||||| |||||||  |||||||    
T  27805998 cactactaaaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttacgaccaaggaatttgt 27806097  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  27806098 gaggaatttcattttttccgtcactaattttcctcgctaattttgctttttctagtagtg 27806157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 250 - 412
Target Start/End: Original strand, 18217807 - 18217968
Alignment:
Q  250 aatcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatt 349  Q
    |||||||||||| |||| |||  ||||||||||||||||||||||| ||||||| |||||||||| ||||| ||||||| ||||||||||||||  ||||    
T  18217807 aatcactactaaaaaattaaat-ttagtgagggaaatttagtgaggaaaaacgtaaaatccctctctaatttcgtcactaaattttgcgaccaaggaatt 18217905  T
Q  350 tgtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18217906 tgtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 18217968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 268 - 412
Target Start/End: Complemental strand, 23699969 - 23699825
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    ||||||||||||| ||||||| ||||||||||| |||||||||||||||||||| |||||| |||||||||||||  |||||||||||||||||||||||    
T  23699969 aaaaattagtgagagaaattttgtgagggaaaatgtgaaatccctctttaattctgtcactaaattttgcgaccatgaaatttgtgaggaatttcatttt 23699870  T
Q  368 ttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||||||||||||||||||||||||||| |||||||||||||||    
T  23699869 ttccgtcactaatttccctcgctaatttttctttttctagtagtg 23699825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 268 - 412
Target Start/End: Complemental strand, 47523794 - 47523650
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||  ||||||||||||||||||||||    
T  47523794 aaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcatttt 47523695  T
Q  368 ttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    |||||||||||||||||||||||||||||  ||||||||||||||    
T  47523694 ttccgtcactaatttccctcgctaattttattttttctagtagtg 47523650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 273 - 412
Target Start/End: Complemental strand, 21917473 - 21917334
Alignment:
Q  273 ttagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccg 372  Q
    ||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||  |||||||||||||||||||||||||||    
T  21917473 ttagtgagggacatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 21917374  T
Q  373 tcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  21917373 tcactaatttccctcactaattttgctttttctagtagtg 21917334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 252 - 414
Target Start/End: Complemental strand, 37135445 - 37135283
Alignment:
Q  252 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttg 351  Q
    |||||||||| |||  ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||| ||||||   |||||     
T  37135445 tcactactaaaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttacgaccatggaattta 37135346  T
Q  352 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgta 414  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  37135345 tgaggaatttcattttttccgtcactaatttccctcactaattttgttttttctagtagtgta 37135283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 263 - 412
Target Start/End: Complemental strand, 7733461 - 7733312
Alignment:
Q  263 aaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttc 362  Q
    |||| |||||||||||||||| ||||||||||| ||||| |||||||||||| |||||||||| || ||||||||||||||  |||||||||||||||||    
T  7733461 aaatcaaaaattagtgagggatatttagtgaggtaaaacatgaaatccctctctaattccgtctctaaattttgcgaccaaggaatttgtgaggaatttc 7733362  T
Q  363 attttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  7733361 attttttccgtcactaatttccctcgctaatttcgctttttctagtagtg 7733312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 253 - 414
Target Start/End: Complemental strand, 15014564 - 15014403
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  |||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||| ||||||||||| ||  |||||||    
T  15014564 cactactaaaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgactaaggaatttgt 15014465  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgta 414  Q
    ||||||||| |||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  15014464 gaggaattttattttttccgtcaccaatttccctcgctaattttactttttctagtagtgta 15014403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 277 - 413
Target Start/End: Original strand, 1842898 - 1843034
Alignment:
Q  277 tgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcac 376  Q
    ||||||||||||||||||||||||||| |||||||||  ||||||||||||| ||||||||||||||  |||||||||||||||||||||||||||||||    
T  1842898 tgagggaaatttagtgagggaaaacgtaaaatccctccctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcac 1842997  T
Q  377 taatttccctcgctaattttgctttttctagtagtgt 413  Q
    |||||||||||| ||||||||||||||||||||||||    
T  1842998 taatttccctcgttaattttgctttttctagtagtgt 1843034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 287 - 413
Target Start/End: Complemental strand, 3904603 - 3904477
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    ||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  3904603 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgcgaggaatttcattttttccgtcactaatttccct 3904504  T
Q  387 cgctaattttgctttttctagtagtgt 413  Q
    |||||||||||||||||||||||||||    
T  3904503 cgctaattttgctttttctagtagtgt 3904477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 253 - 413
Target Start/End: Original strand, 38057612 - 38057772
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| || |||||||||||  |||||||    
T  38057612 cactactaaaaaatcaaaaattaatgagggaaatttagcgagggaaaacgtgaaatccctctttaattccgtcactaaactttgcgaccaaggaatttgt 38057711  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    ||||||||| ||||||||| |||||||||| ||||| | |||||||||||| |||||||||    
T  38057712 gaggaattttattttttccatcactaattttcctcgttgattttgctttttgtagtagtgt 38057772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 273 - 412
Target Start/End: Complemental strand, 23750875 - 23750736
Alignment:
Q  273 ttagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccg 372  Q
    |||||||||||||||||||||||||||| || |||||||||| ||||||||||||| |||||| |||||||  |||||||||| ||||||||||||||||    
T  23750875 ttagtgagggaaatttagtgagggaaaatgtaaaatccctctctaattccgtcactaaattttacgaccaaggaatttgtgagaaatttcattttttccg 23750776  T
Q  373 tcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  23750775 tcactaatttccctcgctaattttgttttttctagtagtg 23750736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 273 - 413
Target Start/End: Complemental strand, 9698677 - 9698537
Alignment:
Q  273 ttagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccg 372  Q
    ||||||||||||||||||||||||||||||| |||| ||||| ||||||||||||| ||||||  ||||||  ||||||||| |||||||||| ||||||    
T  9698677 ttagtgagggaaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttatgaccaaggaatttgtgatgaatttcattatttccg 9698578  T
Q  373 tcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  9698577 tcactaatttccctcgctaattttgctttttctagtagtgt 9698537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 253 - 413
Target Start/End: Complemental strand, 39979783 - 39979623
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| | ||||||||||||||  |||||||    
T  39979783 cactactaaaaaaataaaaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcattaaattttgcgaccaaggaatttgt 39979684  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    ||||||||| || ||||||||||| |||||||||| |||||||||||||| ||| ||||||    
T  39979683 gaggaattttatgttttccgtcacaaatttccctccctaattttgcttttcctaatagtgt 39979623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 251 - 415
Target Start/End: Complemental strand, 40847596 - 40847432
Alignment:
Q  251 atcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaattt 350  Q
    |||||| |||| |||  |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||  |||||    
T  40847596 atcactgctaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaattt 40847497  T
Q  351 gtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgtat 415  Q
    |||| |||||| || ||||||||||| |||||||||| |||||||| ||||| ||||||||||||    
T  40847496 gtgacgaattttatgttttccgtcacaaatttccctccctaattttacttttcctagtagtgtat 40847432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 253 - 412
Target Start/End: Original strand, 1907335 - 1907494
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  |||||||||||||| |||| |||||||||||||| |||||||||||| ||||| ||||||| ||||||||||||||  ||| |||    
T  1907335 cactactaaaaaaacaaaaattagtgaggaaaatctagtgagggaaaacatgaaatccctctctaatttcgtcactaaattttgcgaccaaagaatatgt 1907434  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  1907435 gagggattttattttttccgtcactaatttccctcgctaattttgcttttcctagtagtg 1907494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 273 - 412
Target Start/End: Complemental strand, 6849350 - 6849211
Alignment:
Q  273 ttagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccg 372  Q
    |||| |||||||||||||||||| ||||||| ||||| |||| ||||||||||||| ||||||||||| ||  |||||||||||||||||||||| ||||    
T  6849350 ttagcgagggaaatttagtgaggtaaaacgtaaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttctccg 6849251  T
Q  373 tcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  6849250 tcactaatttccctcgctaattttgctttttctagtagtg 6849211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 268 - 413
Target Start/End: Complemental strand, 42926564 - 42926418
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatt-t 366  Q
    |||||||||||||||| ||||||||||| ||||| |||||||||||| ||||||||||||| ||||||||||| || ||||||||||||||||||||| |    
T  42926564 aaaaattagtgagggatatttagtgaggaaaaacatgaaatccctctctaattccgtcactaaattttgcgactaagaaatttgtgaggaatttcatttt 42926465  T
Q  367 tttccgtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    |||||||||||||||| |||||||||||||  |||||||||||||||    
T  42926464 tttccgtcactaattttcctcgctaattttattttttctagtagtgt 42926418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 287 - 412
Target Start/End: Complemental strand, 3872312 - 3872187
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    ||||||||||||||||| ||||| |||| ||||||||||||| ||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||    
T  3872312 ttagtgagggaaaacgtaaaatctctctctaattccgtcactaaattttgagaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 3872213  T
Q  387 cgctaattttgctttttctagtagtg 412  Q
    ||||||||||||||||||||||||||    
T  3872212 cgctaattttgctttttctagtagtg 3872187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 268 - 413
Target Start/End: Original strand, 48933131 - 48933276
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    ||||||||||||||||||||| |||||  |||||||||||| ||||| ||||||||||||| |||||||||||||   |||||||||||||||| |||||    
T  48933131 aaaaattagtgagggaaattttgtgagaaaaaacgtgaaattcctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaattttatttt 48933230  T
Q  368 ttccgtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||    
T  48933231 ttccgtcactaattttcctcgctaattttgctttttctaatagtgt 48933276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 253 - 382
Target Start/End: Complemental strand, 10050995 - 10050866
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||  |||||||    
T  10050995 cactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgt 10050896  T
Q  353 gaggaatttcattttttccgtcactaattt 382  Q
    ||| ||||||||||||||||||||||||||    
T  10050895 gagaaatttcattttttccgtcactaattt 10050866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 283 - 412
Target Start/End: Original strand, 21623031 - 21623159
Alignment:
Q  283 aaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaattt 382  Q
    ||||||||||||||||||||| |||||||||| ||||||| ||||| ||||||||| ||||  |||||||||||||||||||||||||||||||||||||    
T  21623031 aaatttagtgagggaaaacgtaaaatccctctctaattccatcactaaattttgcgcccaaggaatttgtgaggaatttcattttttccgtcactaattt 21623130  T
Q  383 ccctcgctaattttgctttttctagtagtg 412  Q
    |||||||| |||||||||||||||||||||    
T  21623131 ccctcgct-attttgctttttctagtagtg 21623159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 291 - 414
Target Start/End: Complemental strand, 2650949 - 2650826
Alignment:
Q  291 tgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccctcgct 390  Q
    ||||||||||||| |||||||||| ||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||| ||||||| ||    
T  2650949 tgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaaattccctcact 2650850  T
Q  391 aattttgctttttctagtagtgta 414  Q
    |||||| |||||||||||||||||    
T  2650849 aatttttctttttctagtagtgta 2650826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 289 - 412
Target Start/End: Original strand, 23539248 - 23539371
Alignment:
Q  289 agtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccctcg 388  Q
    |||||||||| ||||||||||||||| ||||||||||| | ||||||||||| |   |||||||||||||||||||||||||||||||||||||||||||    
T  23539248 agtgagggaatacgtgaaatccctctctaattccgtcattaaattttgcgactatggaatttgtgaggaatttcattttttccgtcactaatttccctcg 23539347  T
Q  389 ctaattttgctttttctagtagtg 412  Q
    ||||||||||||||||||||||||    
T  23539348 ctaattttgctttttctagtagtg 23539371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 252 - 395
Target Start/End: Original strand, 36636485 - 36636628
Alignment:
Q  252 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttg 351  Q
    |||||||||| |||  |||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||  ||||||    
T  36636485 tcactactaaaaaaacaaaaattagtgaggcaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttg 36636584  T
Q  352 tgaggaatttcattttttccgtcactaatttccctcgctaattt 395  Q
    |||||||||| || ||||||||||| |||||||||| |||||||    
T  36636585 tgaggaattttatgttttccgtcacaaatttccctccctaattt 36636628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 250 - 412
Target Start/End: Complemental strand, 816353 - 816191
Alignment:
Q  250 aatcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatt 349  Q
    |||||||||||| |||  |||||||||||||| |||||||| || |||||||||||||||||||| ||||||||||||| ||||||||||||||  ||||    
T  816353 aatcactactaaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt 816254  T
Q  350 tgtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||||  ||||  |||||||||||||||||||||||| |||| |||| |||||| |||||||    
T  816253 tgtgagagattttgttttttccgtcactaatttccctccctaaatttgttttttccagtagtg 816191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 253 - 413
Target Start/End: Original strand, 33427670 - 33427829
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  |||||||| | ||||| | ||||||||||||||| |||||| ||||| ||||||||||||| |||||| |||||||  |||||||    
T  33427670 cactactaaaaaaacaaaaattaataagggatacttagtgagggaaaacatgaaattcctctctaattccgtcactaaattttacgaccaaagaatttgt 33427769  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    |||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||    
T  33427770 gaggaatttcatttttt-ggtcactaatttccctcgctaattttgttttttctagtagtgt 33427829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 279 - 414
Target Start/End: Complemental strand, 14786768 - 14786633
Alignment:
Q  279 agggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcacta 378  Q
    |||||||||||  |||||||||||| |||| ||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||    
T  14786768 agggaaatttaacgagggaaaacgtaaaattcctttttaattccgtcactaaattttgcgaccaaaaaatttgtgaggaatttcattttttctgtcacta 14786669  T
Q  379 atttccctcgctaattttgctttttctagtagtgta 414  Q
    |||| |||| ||||||||| |||||||| |||||||    
T  14786668 attttcctcactaattttgttttttctaatagtgta 14786633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 268 - 412
Target Start/End: Original strand, 21871567 - 21871707
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    |||||||||||||| |||||||||||||||||| || ||||| ||    |||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  21871567 aaaaattagtgaggaaaatttagtgagggaaaatgtaaaatctct----aattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcatttt 21871662  T
Q  368 ttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||| |||| |||| |||||||||||||| ||||||||||||||    
T  21871663 ttccgccactgattttcctcgctaattttgttttttctagtagtg 21871707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 251 - 412
Target Start/End: Original strand, 36993798 - 36993959
Alignment:
Q  251 atcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaattt 350  Q
    ||||||||||| |||  |||||||||||| ||||||||||||||| ||||| ||||||| || | ||||||||||||| |||||| |||| || ||||||    
T  36993798 atcactactaaaaaaacaaaaattagtgaaggaaatttagtgaggaaaaacatgaaatctctttctaattccgtcactaaattttacgactaagaaattt 36993897  T
Q  351 gtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||||||||| || |||||| |||| |||||||||| |||||||||||||| |||||||||    
T  36993898 gtgaggaattttatattttccatcacaaatttccctccctaattttgcttttcctagtagtg 36993959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 268 - 412
Target Start/End: Complemental strand, 20924102 - 20923958
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    |||||||||||| ||||||||||||||||||||| |||||||||||| |||||| |||||| ||||||| |||||| |||||||| ||  |||| |||||    
T  20924102 aaaaattagtgatggaaatttagtgagggaaaacatgaaatccctctctaattctgtcactaaattttgtgaccaacaaatttgtaagagattttatttt 20924003  T
Q  368 ttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    |||| |||||||||||||||  ||||||| |||||||||||||||    
T  20924002 ttccatcactaatttccctccataattttactttttctagtagtg 20923958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 287 - 413
Target Start/End: Complemental strand, 1824325 - 1824199
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    ||||||||||||||  |||||| ||||| ||||||||||||| |||||||||||||| ||||||||||||||||| || ||||||||||| |||||||||    
T  1824325 ttagtgagggaaaatatgaaattcctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaattttatgttttccgtcacaaatttccct 1824226  T
Q  387 cgctaattttgctttttctagtagtgt 413  Q
    | |||||||||||||| ||||||||||    
T  1824225 ccctaattttgcttttcctagtagtgt 1824199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 268 - 410
Target Start/End: Original strand, 32267342 - 32267483
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    ||||||| ||||||||||||||| |||||||||||  |||||||||| |||||| |||||| |||||||||| ||| |||||||||||| |||| | |||    
T  32267342 aaaaatttgtgagggaaatttagagagggaaaacgcaaaatccctctctaattctgtcactaaattttgcgatcaagaaatttgtgagggatttta-ttt 32267440  T
Q  368 ttccgtcactaatttccctcgctaattttgctttttctagtag 410  Q
    ||||||||||||| |||||| |||||||||| |||||||||||    
T  32267441 ttccgtcactaatctccctccctaattttgcattttctagtag 32267483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 253 - 412
Target Start/End: Original strand, 15969766 - 15969924
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  |||||||||||||  | ||||||||||||||||| |||||| ||||| ||||||||||||| |||||| |||||||  |||||||    
T  15969766 cactactaaaaaaacaaaaattagtgag--atatttagtgagggaaaacatgaaattcctctctaattccgtcactaaattttacgaccaaagaatttgt 15969863  T
Q  353 gaggaatttca-ttttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||| ||||||| ||||||||||||||||| ||||||  ||||||| |||||||||||||||    
T  15969864 gagaaatttcatttttttccgtcactaatatccctcattaattttactttttctagtagtg 15969924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 273 - 382
Target Start/End: Original strand, 45664768 - 45664877
Alignment:
Q  273 ttagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccg 372  Q
    |||||||||||||| |||||||||||||||| |||||||||| ||||||||||||| |||||||||| |||  ||||||||||||||||||||||||| |    
T  45664768 ttagtgagggaaatatagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgatcaaggaatttgtgaggaatttcattttttctg 45664867  T
Q  373 tcactaattt 382  Q
    ||||||||||    
T  45664868 tcactaattt 45664877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 251 - 403
Target Start/End: Original strand, 26415402 - 26415554
Alignment:
Q  251 atcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaattt 350  Q
    |||||| |||| |||  ||||||||||||||||| ||||| |||| ||||||| |||||||||||||||| ||||||| |||||| ||| ||| ||||||    
T  26415402 atcactgctaaaaaagcaaaaattagtgagggaattttagagaggaaaaacgtaaaatccctctttaatttcgtcactaaattttacgatcaaaaaattt 26415501  T
Q  351 gtgaggaatttcattttttccgtcactaatttccctcgctaattttgcttttt 403  Q
    ||||| ||||| ||||||||| |||||||||||| || |||||||| ||||||    
T  26415502 gtgagaaattttattttttccatcactaatttccttctctaattttacttttt 26415554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 268 - 396
Target Start/End: Original strand, 31042246 - 31042374
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||| |||||| |||||| ||||||||||||||  |||||||||| ||||| |||||    
T  31042246 aaaaattagtgagggaattttagagagggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccaaggaatttgtgagaaattttatttt 31042345  T
Q  368 ttccgtcactaatttccctcgctaatttt 396  Q
    |||| | |||||||| |||| ||||||||    
T  31042346 ttccataactaattttcctctctaatttt 31042374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 268 - 411
Target Start/End: Original strand, 24140445 - 24140588
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    |||||||||||||||||||||||||||||||||| | |||||| |||  |||||||||| | |||||| |||||||  |||||||||||||||| || ||    
T  24140445 aaaaattagtgagggaaatttagtgagggaaaacataaaatccttctccaattccgtcattaaattttacgaccaaagaatttgtgaggaattttatatt 24140544  T
Q  368 ttccgtcactaatttccctcgctaattttgctttttctagtagt 411  Q
    ||||||||| ||||| |||| |||||||| ||||| ||||||||    
T  24140545 ttccgtcacaaattttcctccctaattttacttttcctagtagt 24140588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 287 - 413
Target Start/End: Original strand, 4514779 - 4514905
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    ||||||||||||||  |||||||||||| ||||||| ||||| ||||||||||||||  |||||||||| ||||| || ||||||||||| |||||||||    
T  4514779 ttagtgagggaaaatatgaaatccctctctaattccttcactaaattttgcgaccaaagaatttgtgagaaattttatgttttccgtcacaaatttccct 4514878  T
Q  387 cgctaattttgctttttctagtagtgt 413  Q
    | |||||||||||||| ||||||||||    
T  4514879 ccctaattttgcttttcctagtagtgt 4514905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 287 - 412
Target Start/End: Complemental strand, 2093487 - 2093362
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    ||||||||||||||||| ||||| |||| ||||||||||||| |||||| ||| |||    ||| |||||||||||||||||||||||||||||||||||    
T  2093487 ttagtgagggaaaacgtcaaatctctctctaattccgtcactaaatttttcgatcaaattttttttgaggaatttcattttttccgtcactaatttccct 2093388  T
Q  387 cgctaattttgctttttctagtagtg 412  Q
    |||| ||||| |||||||||||||||    
T  2093387 cgctgatttttctttttctagtagtg 2093362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 268 - 408
Target Start/End: Original strand, 2457665 - 2457803
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    |||||||||||||| |||||| |||||||||||| ||||||||||||  |||||||||||| ||||||||||| ||  ||||||||||  |||| || ||    
T  2457665 aaaaattagtgaggaaaattttgtgagggaaaacatgaaatccctctcaaattccgtcactaaattttgcgacaaaagaatttgtgag--attttatatt 2457762  T
Q  368 ttccgtcactaatttccctcgctaattttgctttttctagt 408  Q
    ||| |||||||||||||||| |||||||||||||| |||||    
T  2457763 ttctgtcactaatttccctccctaattttgcttttcctagt 2457803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 268 - 404
Target Start/End: Original strand, 22501589 - 22501725
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| | ||||||||| ||||  |||||||||   |||| |||||    
T  22501589 aaaaattagtgagggaaatttagagagggaaaacgtgaaatccctctctaattccgtcattaaattttgcggccaaagaatttgtgaaagattttatttt 22501688  T
Q  368 ttccgtcactaatttccctcgctaattttgctttttc 404  Q
    ||||||||||||||| | ||  ||||||||| |||||    
T  22501689 ttccgtcactaattttcatccttaattttgccttttc 22501725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 287 - 414
Target Start/End: Original strand, 26577279 - 26577406
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    ||||||||||||||| |||||||||||| |||| |||||||| ||||||||||||||  |||||||||||||||| || ||||||||||| | |||||||    
T  26577279 ttagtgagggaaaacatgaaatccctctctaataccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcacaagtttccct 26577378  T
Q  387 cgctaattttgctttttctagtagtgta 414  Q
      |||||||||||||| | |||||||||    
T  26577379 tcctaattttgcttttcccagtagtgta 26577406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 253 - 413
Target Start/End: Original strand, 27130314 - 27130472
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  |||||||| |||||||||||||| ||||||||| |||||||||||||  |||||||||||| | ||||||||  ||  |||||||    
T  27130314 cactactaaaaaagtaaaaattaatgagggaaatttagagagggaaaatgtgaaatccctct--aattccgtcactaacttttgcgattaacgaatttgt 27130411  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    |||| |||| || |||||| ||||| ||||| ||| | |||||||||||||||||||||||    
T  27130412 gaggcattttatattttccatcactgatttctctctcgaattttgctttttctagtagtgt 27130472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 268 - 411
Target Start/End: Complemental strand, 27132865 - 27132722
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    ||||||||||||||||||||  | |||| |||||| |||||  |||| |||||| |||||| |||||||| || || |||||||||| | |||| |||||    
T  27132865 aaaaattagtgagggaaattgtgagaggaaaaacgcgaaatatctctctaattctgtcactaaattttgcaacaaacaaatttgtgatggattttatttt 27132766  T
Q  368 ttccgtcactaatttccctcgctaattttgctttttctagtagt 411  Q
    |||||| || |||||||||| |||||||| ||||||||||||||    
T  27132765 ttccgttaccaatttccctctctaattttactttttctagtagt 27132722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 270 - 408
Target Start/End: Original strand, 27304869 - 27305005
Alignment:
Q  270 aaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttttt 369  Q
    |||||||| |||||||||| |||| ||||| ||||| |||||||| ||||||||||||| ||||||||| ||||  |||||||| || |||| |||||||    
T  27304869 aaattagtcagggaaattt-gtgaaggaaa-cgtgacatccctctctaattccgtcactaaattttgcggccaaggaatttgtgggggattttatttttt 27304966  T
Q  370 ccgtcactaatttccctcgctaattttgctttttctagt 408  Q
    | |||||||||||||||| ||||||||| |||| |||||    
T  27304967 ctgtcactaatttccctccctaattttgtttttcctagt 27305005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 268 - 412
Target Start/End: Complemental strand, 25777256 - 25777112
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    |||| ||| |||||||||||||| |||||||||||||||||| |||| ||||| | ||||| |||||| ||| ||| |||||||||||| |||| |||||    
T  25777256 aaaatttaatgagggaaatttagagagggaaaacgtgaaatcactctctaatttcatcactaaattttacgatcaaaaaatttgtgagggattttatttt 25777157  T
Q  368 ttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
     |  ||||||||||| | || |||||||| | |||||||||||||    
T  25777156 attggtcactaattttcttccctaattttaccttttctagtagtg 25777112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 251 - 412
Target Start/End: Original strand, 687855 - 688005
Alignment:
Q  251 atcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaattt 350  Q
    ||||||||||| |||  ||||||||||||| ||||||||||||||||||| || |||||| ||| |||||| |||||| || |||||||| |            
T  687855 atcactactaaaaaaacaaaaattagtgagagaaatttagtgagggaaaatgtaaaatccttctctaattctgtcactaaactttgcgacaa-------- 687946  T
Q  351 gtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
       |||||||| ||||||| ||||| | ||||||||||||||||||||||||||||||||||    
T  687947 ---aggaattttatttttttcgtcattgatttccctcgctaattttgctttttctagtagtg 688005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 286 - 403
Target Start/End: Original strand, 11852021 - 11852138
Alignment:
Q  286 tttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccc 385  Q
    ||||| |||||||||| |||||||| ||| ||||||||||||| ||||||| ||||||  ||||||||||  |||| |||||||| ||||| |||||| |    
T  11852021 tttagagagggaaaacctgaaatccttctctaattccgtcactaaattttgtgaccaaagaatttgtgagacattttattttttctgtcacaaatttctc 11852120  T
Q  386 tcgctaattttgcttttt 403  Q
    || |||||||||||||||    
T  11852121 tccctaattttgcttttt 11852138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 268 - 412
Target Start/End: Complemental strand, 10222773 - 10222630
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    |||||||||||||  |||||||| ||  |||||||| |||||||||| |||||| |||| | |||||||||| ||| |||||| |||| ||||| | |||    
T  10222773 aaaaattagtgagaaaaatttagagaaagaaaacgtaaaatccctctctaattctgtcattaaattttgcgatcaa-aaatttatgagaaattttacttt 10222675  T
Q  368 ttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||| ||||||||||| |||| |||||| || ||||||||||||||    
T  10222674 ttctgtcactaattttcctccctaattatgttttttctagtagtg 10222630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 479 - 538
Target Start/End: Complemental strand, 31448943 - 31448884
Alignment:
Q  479 cattgatagataaaatctaaattattatggaacattgataggtttcttgctcaatattca 538  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  31448943 cattgatagataaaatctaaattattatgaaaaattgataggtttcttgctcaatattca 31448884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 268 - 382
Target Start/End: Complemental strand, 11890291 - 11890177
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    |||| ||||||||| ||||||||||||||||||  ||| |||||||  ||| | ||||||| ||||||| ||||||  ||||| ||||| |||| |||||    
T  11890291 aaaagttagtgaggaaaatttagtgagggaaaatatgatatccctcgctaacttcgtcactaaattttgagaccaaagaatttatgagggattttatttt 11890192  T
Q  368 ttccgtcactaattt 382  Q
    |||||||||||||||    
T  11890191 ttccgtcactaattt 11890177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 268 - 370
Target Start/End: Complemental strand, 15330349 - 15330247
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    |||||||| ||||||| ||||||| ||| ||||| ||||||  |||| |||||| |||||| |||||||||||||| ||||||||||| ||||||| |||    
T  15330349 aaaaattaatgagggatatttagtaaggaaaaacttgaaatttctctctaattctgtcactaaattttgcgaccaagaaatttgtgagaaatttcaattt 15330250  T
Q  368 ttc 370  Q
    |||    
T  15330249 ttc 15330247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 346 - 412
Target Start/End: Original strand, 38090336 - 38090402
Alignment:
Q  346 aatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||||||||| |||| |||||||||||||| |||||||||| ||||||||||| || |||||||||    
T  38090336 aatttgtgagggattttattttttccgtcacaaatttccctccctaattttgctattcctagtagtg 38090402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 482 - 535
Target Start/End: Complemental strand, 31460376 - 31460323
Alignment:
Q  482 tgatagataaaatctaaattattatggaacattgataggtttcttgctcaatat 535  Q
    |||||||||||||||||||| ||||| || ||||||||||||||||||||||||    
T  31460376 tgatagataaaatctaaatttttatgaaaaattgataggtttcttgctcaatat 31460323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 287 - 412
Target Start/End: Complemental strand, 1822118 - 1821996
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    ||||||||| ||||| ||||||| |||| ||||||| ||| | ||||||  || | |  |||||||||||||||| || ||||||||||||||||   ||    
T  1822118 ttagtgaggaaaaacatgaaatctctctctaattccttcagtaaattttaagatcgaggaatttgtgaggaattttatattttccgtcactaatt---ct 1822022  T
Q  387 cgctaattttgctttttctagtagtg 412  Q
    | ||||||||||||||  ||||||||    
T  1822021 ccctaattttgcttttcatagtagtg 1821996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 265 - 402
Target Start/End: Original strand, 8116463 - 8116599
Alignment:
Q  265 ataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcat 364  Q
    ||||||||||||| ||| | |||||| |||| |||| |||||||| ||  ||  |||| ||||| ||||||| ||| |  || |||||||||||||| ||    
T  8116463 ataaaaaattagttaggcagatttagagaggaaaaatgtgaaatctctaattt-ttccatcactaaattttgtgacgagaaagtttgtgaggaattttat 8116561  T
Q  365 tttttccgtcactaatttccctcgctaattttgctttt 402  Q
    |||||  ||||||||||| || | |||||||| |||||    
T  8116562 tttttttgtcactaattttccgctctaatttttctttt 8116599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 345 - 405
Target Start/End: Complemental strand, 5106799 - 5106740
Alignment:
Q  345 aaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttct 405  Q
    |||||| ||||| ||||| ||||||| |||||||||||||||  |||||||||||||||||    
T  5106799 aaatttatgagggatttc-ttttttctgtcactaatttcccttactaattttgctttttct 5106740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 305 - 411
Target Start/End: Complemental strand, 1841889 - 1841784
Alignment:
Q  305 aaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttc 404  Q
    |||||||||| ||||||| ||| | |||||||| | |||  ||||||||||| |||| ||||||| | | ||||||||| ||  ||||||||||||||      
T  1841889 aaatccctctctaattccttcagtaaattttgcaatcaaggaatttgtgagggattttatttttt-cttaactaatttctcttcctaattttgcttttca 1841791  T
Q  405 tagtagt 411  Q
    |||||||    
T  1841790 tagtagt 1841784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 128; Significance: 6e-66; HSPs: 92)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 253 - 412
Target Start/End: Original strand, 27449064 - 27449223
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||  |||||||    
T  27449064 cactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgt 27449163  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27449164 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 27449223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 268 - 413
Target Start/End: Complemental strand, 19270008 - 19269863
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||    
T  19270008 aaaaattagtgagggaaatttagtgagggaaaacgtaaaatccctctttaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcatttt 19269909  T
Q  368 ttccgtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||    
T  19269908 ttccgtcactaatttccctcgctaattttgctttttctaatagtgt 19269863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 253 - 413
Target Start/End: Original strand, 9652554 - 9652714
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| ||||||||||| |  ||||||||    
T  9652554 cactactaaaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgactatgaaatttgt 9652653  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  9652654 gaggaatttcattttttccgtcactaatttccctcgccaattttgctttttctagtagtgt 9652714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 251 - 412
Target Start/End: Complemental strand, 18091709 - 18091547
Alignment:
Q  251 atcactactaataaata-aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatt 349  Q
    ||||||||||| ||| | |||||||||||||||| ||||||||||||||||| | |||||||||| ||||||||||||| |||||||||||||| |||||    
T  18091709 atcactactaaaaaaaacaaaaattagtgagggatatttagtgagggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaaaaatt 18091610  T
Q  350 tgtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  18091609 tgtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttttagtagtg 18091547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 267 - 412
Target Start/End: Complemental strand, 11007828 - 11007683
Alignment:
Q  267 aaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattt 366  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||| |||||||||| |||||||||||    
T  11007828 aaaaaattagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgacgaatttcattt 11007729  T
Q  367 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||    
T  11007728 tttccgtcactaatttcccttactaattttgctttttctagtagtg 11007683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 268 - 411
Target Start/End: Original strand, 11915749 - 11915892
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||| |||||| ||||||||||||| ||    
T  11915749 aaaatttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttatgaggaatttcatatt 11915848  T
Q  368 ttccgtcactaatttccctcgctaattttgctttttctagtagt 411  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  11915849 ttccgtcactaatttccctcgctaattttgctttttctagtagt 11915892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 250 - 412
Target Start/End: Original strand, 5260910 - 5261072
Alignment:
Q  250 aatcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatt 349  Q
    |||||||||||| |||   ||| |||||||||||||| |||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||  ||||    
T  5260910 aatcactactaaaaaaactaaatttagtgagggaaatatagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatt 5261009  T
Q  350 tgtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  5261010 tgtgaggaatttcattttttccgtcactaatttccctcactaattttgctttttctagtagtg 5261072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 253 - 403
Target Start/End: Complemental strand, 29704191 - 29704041
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| |||||||||| ||  ||||||||    
T  29704191 cactactaaaaaaacaaaaattagtgagggaaattttgtgagagaaaacgtgaaatccctctttaattccgtcactaaattttgcgatcataaaatttgt 29704092  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgcttttt 403  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29704091 gaggaatttcattttttccgtcactaatttccctcgctaattttgcttttt 29704041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 253 - 405
Target Start/End: Original strand, 18539780 - 18539932
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||||  |||||| |    
T  18539780 cactactaaaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaattttt 18539879  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttct 405  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  18539880 gaggaatttcattttttccgtcactaatttccctctctaattttgctttttct 18539932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 269 - 413
Target Start/End: Original strand, 25882562 - 25882706
Alignment:
Q  269 aaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttt 368  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||| |||||| |||||||  |||||||||||||||||||||||    
T  25882562 aaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttacgaccaaagaatttgtgaggaatttcattttt 25882661  T
Q  369 tccgtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    |||||||||||||||||||||||||||||||||||||| ||||||    
T  25882662 tccgtcactaatttccctcgctaattttgctttttctaatagtgt 25882706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 253 - 412
Target Start/End: Complemental strand, 7623690 - 7623531
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||| ||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||  ||| |||    
T  7623690 cactactaaaaaatcaaaaattagtgagggaaattttgtgagggaaaatgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatctgt 7623591  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  7623590 gagaaatttcattttttccgtcactaatttccctcgctgatttttctttttctagtagtg 7623531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 250 - 412
Target Start/End: Original strand, 17762615 - 17762777
Alignment:
Q  250 aatcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatt 349  Q
    |||||||||||| |||  |||||||||||||||| ||||||||||||||||| ||||||| |||| ||||||||||||| ||||||| ||||||  ||||    
T  17762615 aatcactactaaaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatcgctctctaattccgtcactaaattttgtgaccaaggaatt 17762714  T
Q  350 tgtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||    
T  17762715 tgtgaggaatttcattttttccgtcactaatttccctcgctaattttgttctttctagtagtg 17762777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 250 - 412
Target Start/End: Original strand, 19063935 - 19064097
Alignment:
Q  250 aatcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatt 349  Q
    |||||||||||| |||  |||||||||||||||| ||||||||||||||||| ||||||| |||| ||||||||||||| ||||||| ||||||  ||||    
T  19063935 aatcactactaaaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatcgctctctaattccgtcactaaattttgtgaccaaggaatt 19064034  T
Q  350 tgtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||    
T  19064035 tgtgaggaatttcattttttccgtcactaatttccctcgctaattttgttctttctagtagtg 19064097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 268 - 413
Target Start/End: Original strand, 8110330 - 8110475
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||| | |||||| |||||||  ||||||||||||||||||||||    
T  8110330 aaaaattagtgagggaaatttagtgagggaaaacgtaaaattcctctctaattccgtcattaaattttccgaccaaggaatttgtgaggaatttcatttt 8110429  T
Q  368 ttccgtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    
T  8110430 ttccgtcactaatttccctcactaattttgctttttctagtagtgt 8110475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 268 - 413
Target Start/End: Complemental strand, 18104674 - 18104529
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||| |||||||||||||   |||||||||||||||| |||||    
T  18104674 aaaaattagtgagggaaattttgtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttaatttt 18104575  T
Q  368 ttccgtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  18104574 ttccgtcaataatttccctcgctaattttgctttttctagtagtgt 18104529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 283 - 412
Target Start/End: Original strand, 48404866 - 48404995
Alignment:
Q  283 aaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaattt 382  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  48404866 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaattt 48404965  T
Q  383 ccctcgctaattttgctttttctagtagtg 412  Q
    ||||||||||||||||||||||||||||||    
T  48404966 ccctcgctaattttgctttttctagtagtg 48404995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 252 - 412
Target Start/End: Original strand, 18379999 - 18380159
Alignment:
Q  252 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttg 351  Q
    |||||||||| |||  |||||||||||||||||||||| |||||||||| || |||||||||||||||||||||||| |||||| ||| ||| |||||||    
T  18379999 tcactactaaaaaaacaaaaattagtgagggaaatttaatgagggaaaatgtaaaatccctctttaattccgtcactaaattttacgatcaagaaatttg 18380098  T
Q  352 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||| |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  18380099 tgaagaatttcattttttccgtcactgatttccctcgctaattttactttttctagtagtg 18380159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 253 - 413
Target Start/End: Complemental strand, 26390793 - 26390633
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  |||||||||||||||| |||| |||||||| ||| |||||||||||| ||||||||||||| ||||||| ||||||  |||||||    
T  26390793 cactactaaaaaaacaaaaattagtgagggatattttgtgagggataacatgaaatccctctctaattccgtcactaaattttgtgaccaaggaatttgt 26390694  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  26390693 gaggaatttcattttttccgtcactaatttctctcgctaattttgctttttctagtagtgt 26390633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 283 - 414
Target Start/End: Original strand, 13921331 - 13921462
Alignment:
Q  283 aaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaattt 382  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  13921331 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaattt 13921430  T
Q  383 ccctcgctaattttgctttttctagtagtgta 414  Q
     |||||||||||||||||||||||||||||||    
T  13921431 tcctcgctaattttgctttttctagtagtgta 13921462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 273 - 412
Target Start/End: Original strand, 19223445 - 19223584
Alignment:
Q  273 ttagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccg 372  Q
    |||||||||||||||||||| |||||||||| |||||||||| ||||||||||||| |||||| |||||||  |||||||||||||||||||||||||||    
T  19223445 ttagtgagggaaatttagtgggggaaaacgtaaaatccctctctaattccgtcactaaattttacgaccaaggaatttgtgaggaatttcattttttccg 19223544  T
Q  373 tcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  19223545 tcaccaatttccctcgctaattttgctttttctagtagtg 19223584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 268 - 414
Target Start/End: Complemental strand, 4393494 - 4393348
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| ||||||||||||   ||||||||||| |||||||||||    
T  4393494 aaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccgtgaaatttgtgagaaatttcatttt 4393395  T
Q  368 ttccgtcactaatttccctcgctaattttgctttttctagtagtgta 414  Q
    |||||||||||||||||||| ||||||||||||||||| | ||||||    
T  4393394 ttccgtcactaatttccctcactaattttgctttttctggcagtgta 4393348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 268 - 412
Target Start/End: Original strand, 8428162 - 8428306
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    |||||||||||||||| ||||||||||||||||| ||||||| |||| ||||||||||||| |||||| |||||||  ||||||||||||||||||||||    
T  8428162 aaaaattagtgagggatatttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttacgaccaaggaatttgtgaggaatttcatttt 8428261  T
Q  368 ttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    |||||||||||||||||||||||||||||  ||||||||||||||    
T  8428262 ttccgtcactaatttccctcgctaattttattttttctagtagtg 8428306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 253 - 413
Target Start/End: Original strand, 30219314 - 30219474
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  |||||||||||||||||||||||||||| ||||| |||||||||||| ||||||||||||| |||||||||||||| |||||| |    
T  30219314 cactactaaaaaaacaaaaattagtgagggaaatttagtgaggaaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaaaaatttat 30219413  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    ||||||||| || ||||||||||| |||||||||| |||||||||||||| ||||||||||    
T  30219414 gaggaattttatgttttccgtcacaaatttccctccctaattttgcttttcctagtagtgt 30219474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 274 - 413
Target Start/End: Complemental strand, 1311097 - 1310958
Alignment:
Q  274 tagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgt 373  Q
    |||||||||||||||||||| ||||||||| |||||||||| ||||||||||||| ||||||||||||||  |||||||||||| |||||||||||||||    
T  1311097 tagtgagggaaatttagtgatggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggattttcattttttccgt 1310998  T
Q  374 cactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    ||||||||| ||| ||||||||||||||||||||||||||    
T  1310997 cactaattttccttgctaattttgctttttctagtagtgt 1310958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 253 - 412
Target Start/End: Original strand, 29956348 - 29956507
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  |||||||| |||||||||||| ||||||||||| ||||||||||| | ||||||||||||| |||||||||||||   |||||||    
T  29956348 cactactaaaaaaacaaaaattaatgagggaaattttgtgagggaaaatgtgaaatccctttctaattccgtcactaaattttgcgaccatggaatttgt 29956447  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  29956448 gaggaatttcattttttccatcactaatttccctcgctaattttactttttctagtagtg 29956507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 253 - 412
Target Start/End: Original strand, 30005503 - 30005662
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  |||||||| |||||||||||| ||||||||||| ||||||||||| | ||||||||||||| |||||||||||||   |||||||    
T  30005503 cactactaaaaaaacaaaaattaatgagggaaattttgtgagggaaaatgtgaaatccctttctaattccgtcactaaattttgcgaccatggaatttgt 30005602  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  30005603 gaggaatttcattttttccatcactaatttccctcgctaattttactttttctagtagtg 30005662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 287 - 413
Target Start/End: Complemental strand, 13905163 - 13905037
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    ||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||    
T  13905163 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcactaatttcgct 13905064  T
Q  387 cgctaattttgctttttctagtagtgt 413  Q
    | |||||||||||||||||||||||||    
T  13905063 ctctaattttgctttttctagtagtgt 13905037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 283 - 412
Target Start/End: Original strand, 21816727 - 21816856
Alignment:
Q  283 aaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaattt 382  Q
    ||||||||||||||||||||| |||| ||||| ||||||||||||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  21816727 aaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaattt 21816826  T
Q  383 ccctcgctaattttgctttttctagtagtg 412  Q
    |||||||||||||| |||||||||||||||    
T  21816827 ccctcgctaatttttctttttctagtagtg 21816856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 287 - 412
Target Start/End: Original strand, 26098823 - 26098948
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    ||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||    
T  26098823 ttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccatcactaatttccct 26098922  T
Q  387 cgctaattttgctttttctagtagtg 412  Q
    ||||||||||||||||||||||||||    
T  26098923 cgctaattttgctttttctagtagtg 26098948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 283 - 412
Target Start/End: Original strand, 29236050 - 29236179
Alignment:
Q  283 aaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaattt 382  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||| || |||||||| ||||||||||||||||||||||||||    
T  29236050 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaattttgtgagaaatttcattttttccgtcactaattt 29236149  T
Q  383 ccctcgctaattttgctttttctagtagtg 412  Q
    |||||||||||||||||||||||| |||||    
T  29236150 ccctcgctaattttgctttttctaatagtg 29236179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 252 - 412
Target Start/End: Original strand, 8543445 - 8543603
Alignment:
Q  252 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttg 351  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| | |||||||||||||  ||| |||    
T  8543445 tcactactaataaa-aaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcattaaattttgcgaccatgaaacttg 8543543  T
Q  352 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    | |||||||||| ||||||| ||||||||||||||||||||||||| |||||||| |||||    
T  8543544 ttaggaatttca-tttttccatcactaatttccctcgctaattttgttttttctaatagtg 8543603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 252 - 412
Target Start/End: Original strand, 16299836 - 16299996
Alignment:
Q  252 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttg 351  Q
    |||||||||| |||  ||||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||| ||||||||||||||  ||||||    
T  16299836 tcactactaaaaaaacaaaaattagtgagggaaatttggtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttg 16299935  T
Q  352 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    |||||||||| || ||||||||||| |||||| ||| |||||||||||||| |||||||||    
T  16299936 tgaggaattttatgttttccgtcacaaatttcgctccctaattttgcttttcctagtagtg 16299996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 274 - 412
Target Start/End: Original strand, 19610335 - 19610473
Alignment:
Q  274 tagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgt 373  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||  |||||||||||||||| || ||||||||    
T  19610335 tagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgt 19610434  T
Q  374 cactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||| |||||||||| |||||||||||||| |||||||||    
T  19610435 cacaaatttccctccctaattttgcttttcctagtagtg 19610473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 273 - 413
Target Start/End: Original strand, 10803716 - 10803857
Alignment:
Q  273 ttagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttca-ttttttcc 371  Q
    |||| |||||||||||||||||||||||||| |||| ||||||||||||||||| | |||||||||||||| ||||||||||||||||||| ||||||||    
T  10803716 ttagcgagggaaatttagtgagggaaaacgtaaaattcctctttaattccgtcattaaattttgcgaccaagaaatttgtgaggaatttcatttttttcc 10803815  T
Q  372 gtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    |||| ||||||||||| ||||||| |||||||||||||||||    
T  10803816 gtcattaatttccctccctaatttggctttttctagtagtgt 10803857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 268 - 413
Target Start/End: Complemental strand, 11085486 - 11085341
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    ||||||||||||| ||||||||||||||||||  ||||||||||||| ||||||||||||| ||||||||||||||  ||||| ||||||||||||||||    
T  11085486 aaaaattagtgagagaaatttagtgagggaaattgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttatgaggaatttcatttt 11085387  T
Q  368 ttccgtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    |||||| ||| ||||| |||||||||||| ||||||||||||||||    
T  11085386 ttccgttactgatttctctcgctaattttactttttctagtagtgt 11085341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 251 - 412
Target Start/End: Complemental strand, 11837375 - 11837214
Alignment:
Q  251 atcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaattt 350  Q
    ||||||||||| ||| | ||||||| ||||||| | ||||||||||||||| |||||| ||||| ||||||||||||| |||||| |||||||  |||||    
T  11837375 atcactactaaaaaaaataaaattaatgagggatacttagtgagggaaaacatgaaattcctctctaattccgtcactaaattttacgaccaaagaattt 11837276  T
Q  351 gtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||    
T  11837275 gtgaggaatttcattttttccatcacgaatttccctcgctaattttgttttttctagtagtg 11837214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 251 - 412
Target Start/End: Original strand, 29215966 - 29216127
Alignment:
Q  251 atcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaattt 350  Q
    ||||||||||| |||  |||||||||||||||||||||||||||||||||| |||||||||||| ||||||| ||||| ||||||||||||||  |||||    
T  29215966 atcactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccatcactaaattttgcgaccaaggaattt 29216065  T
Q  351 gtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||||||||| || ||||||||||| ||||| ||||  ||||||||||||| |||||||||    
T  29216066 gtgaggaattttatgttttccgtcacaaattttcctccataattttgcttttcctagtagtg 29216127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 272 - 412
Target Start/End: Original strand, 11219133 - 11219273
Alignment:
Q  272 attagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttcc 371  Q
    |||||||||| |||||| ||||||||||||||||||||||||| ||||||||||| | ||||||||||| |   |||||||||| |||||||||||||||    
T  11219133 attagtgaggaaaattttgtgagggaaaacgtgaaatccctctctaattccgtcattaaattttgcgactatggaatttgtgagaaatttcattttttcc 11219232  T
Q  372 gtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  11219233 gtcactaatttccctcgctaattttgttttttctagtagtg 11219273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 253 - 409
Target Start/End: Original strand, 28389949 - 28390105
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||  |||||||    
T  28389949 cactactaaaaaaataaaaattagtgagggaaatttagtgagggaaaacgtgaaatccttctctaattccgtcactaaattttgcgaccaacgaatttgt 28390048  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagta 409  Q
    |||  |||| |||||||||||||||||||| |||| || ||||| ||||||||||||    
T  28390049 gagagattttattttttccgtcactaattttcctctctgattttactttttctagta 28390105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 287 - 412
Target Start/End: Complemental strand, 43329888 - 43329763
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    |||||||||||||| || |||||| ||| ||||||||||||| |||||| |||||||  |||||||||||||||||||||||||||||||||||||||||    
T  43329888 ttagtgagggaaaatgtaaaatccttctctaattccgtcactaaattttacgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 43329789  T
Q  387 cgctaattttgctttttctagtagtg 412  Q
    ||||||||||||||||||||||||||    
T  43329788 cgctaattttgctttttctagtagtg 43329763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 253 - 412
Target Start/End: Complemental strand, 10941827 - 10941665
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaa---atttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatt 349  Q
    ||||||||| |||  |||||||||| |||||    ||||| ||||||||||| |||||||||||| ||||||| ||||| ||||||||||||||  ||||    
T  10941827 cactactaaaaaaacaaaaattagtaagggatcatatttaatgagggaaaacatgaaatccctctctaattccatcactaaattttgcgaccaaggaatt 10941728  T
Q  350 tgtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  10941727 tgtgaggaatttcattttttccgtcactaatttcccttactaattttgctttttctagtagtg 10941665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 252 - 382
Target Start/End: Complemental strand, 17582461 - 17582331
Alignment:
Q  252 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttg 351  Q
    |||||||||| |||  ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||||   ||||||    
T  17582461 tcactactaaaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttg 17582362  T
Q  352 tgaggaatttcattttttccgtcactaattt 382  Q
    |||||||||| ||||||||||||||||||||    
T  17582361 tgaggaattttattttttccgtcactaattt 17582331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 254 - 412
Target Start/End: Original strand, 31250065 - 31250223
Alignment:
Q  254 actactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtg 353  Q
    |||||||| ||| |||||||| ||||||||||||||| ||||||||||   |||||||||| |||||| |||||| |||||||||||||| ||||||||     
T  31250065 actactaaaaaagaaaaaatttgtgagggaaatttagagagggaaaacacaaaatccctctctaattctgtcactaaattttgcgaccaagaaatttgta 31250164  T
Q  354 aggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    |||||||| |||||||||||||||||| | |||| |||||||||| |||||||||||||    
T  31250165 aggaattttattttttccgtcactaatcttcctccctaattttgcattttctagtagtg 31250223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 287 - 412
Target Start/End: Complemental strand, 1745612 - 1745488
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    ||||||||||||||||| ||||| |||| ||||||||||||| ||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||    
T  1745612 ttagtgagggaaaacgtaaaatctctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcat-ttttccgtcactaatttccct 1745514  T
Q  387 cgctaattttgctttttctagtagtg 412  Q
    ||||||||||||||||| ||||||||    
T  1745513 cgctaattttgctttttttagtagtg 1745488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 287 - 412
Target Start/End: Complemental strand, 3461435 - 3461310
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    ||||||||||||||||| |||||||||| ||||||||||| | |||||||||| ||| ||||||||||||||||| |||||||| ||||||||||||| |    
T  3461435 ttagtgagggaaaacgtaaaatccctctctaattccgtcattaaattttgcgatcaagaaatttgtgaggaattttattttttctgtcactaatttcctt 3461336  T
Q  387 cgctaattttgctttttctagtagtg 412  Q
    ||||||||||||||||||||||||||    
T  3461335 cgctaattttgctttttctagtagtg 3461310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 287 - 412
Target Start/End: Original strand, 23773487 - 23773612
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    ||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||    
T  23773487 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcatttcttccgtcactaatttccct 23773586  T
Q  387 cgctaattttgctttttctagtagtg 412  Q
      ||||||||| ||||||||||||||    
T  23773587 tactaattttgttttttctagtagtg 23773612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 253 - 409
Target Start/End: Original strand, 1628191 - 1628347
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  ||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||| |||||| |||| ||  ||||| |    
T  1628191 cactactaaaaaagtaaaaattagtgagggaaatttagagagggaaaacgtgaaatccctctctaatttcgtcactaaattttacgactaaggaatttat 1628290  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagta 409  Q
    ||||||||| ||||||||| ||| ||||||||||| |||||||| ||||||||||||    
T  1628291 gaggaattttattttttccatcattaatttccctccctaattttactttttctagta 1628347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 252 - 412
Target Start/End: Original strand, 15490010 - 15490169
Alignment:
Q  252 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttg 351  Q
    |||||||||| |||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||  |||||| |||||||||||||| |||||||    
T  15490010 tcactactaaaaaaataaaaattagtgagggaaatttagtgagagaaaacgtgaaatccctctttaatt-tgtcactaaattttgcgaccaaaaaatttg 15490108  T
Q  352 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||  |||| ||||||| ||||||||||||  ||| || |||||||||||| ||||||||    
T  15490109 tgagagattttatttttttcgtcactaatttttctccctgattttgctttttttagtagtg 15490169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 253 - 412
Target Start/End: Complemental strand, 26830601 - 26830441
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||  |||||||||||||   |||||||    
T  26830601 cactactaaaaaagcaaaaattagtgagggaaatttagagagggaaaacgtgaaatccctctctaattccgtcacaaaattttgcgaccatggaatttgt 26830502  T
Q  353 gaggaatttca-ttttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||||||| | |||||||||||| |||||| |||| |||||||| ||||||||| |||||    
T  26830501 gaggaattttatttttttccgtcattaattttcctccctaatttttctttttctaatagtg 26830441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 267 - 415
Target Start/End: Original strand, 46942478 - 46942625
Alignment:
Q  267 aaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattt 366  Q
    |||||||| ||||||||| ||||| ||||||||||||||||||||||| |||||| |||||| |||||||||||||| ||| |||||||| |||| ||||    
T  46942478 aaaaaatt-gtgagggaattttagagagggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccaagaaaattgtgagggatttaattt 46942576  T
Q  367 tttccgtcactaatttccctcgctaattttgctttttctagtagtgtat 415  Q
    |||| ||||||||||||| || ||||||||| |||||||||||||||||    
T  46942577 tttctgtcactaatttccttccctaattttgatttttctagtagtgtat 46942625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 287 - 414
Target Start/End: Original strand, 5565732 - 5565859
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    |||||||||||||||||||||||||||| |||||  |||||| |||||||||||||| |||||||||||  |||| ||||||||||||||||||||||||    
T  5565732 ttagtgagggaaaacgtgaaatccctctctaattatgtcactaaattttgcgaccaagaaatttgtgagagattttattttttccgtcactaatttccct 5565831  T
Q  387 cgctaattttgctttttctagtagtgta 414  Q
    | || |||||||||||||||||||||||    
T  5565832 ccctgattttgctttttctagtagtgta 5565859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 253 - 412
Target Start/End: Original strand, 36543725 - 36543884
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  ||||||||||||||||||||| |||||||||||| |||||||||||| ||||| ||||||| ||||||||||||||  ||| |||    
T  36543725 cactactaaaaaaacaaaaattagtgagggaaattttgtgagggaaaacatgaaatccctctctaatttcgtcactaaattttgcgaccaaagaatctgt 36543824  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    |||  |||| ||||||||| |||||||||| |||| |||||||| |||||||||||||||    
T  36543825 gagagattttattttttccatcactaattttcctccctaatttttctttttctagtagtg 36543884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 297 - 414
Target Start/End: Original strand, 8546265 - 8546382
Alignment:
Q  297 aaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccctcgctaatttt 396  Q
    |||||||||||||||||| ||||||||||||| |||||||||| ||   ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  8546265 aaaacgtgaaatccctctctaattccgtcactaaattttgcgatcatggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaatttt 8546364  T
Q  397 gctttttctagtagtgta 414  Q
    ||||||||| ||||||||    
T  8546365 gctttttctggtagtgta 8546382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 273 - 382
Target Start/End: Original strand, 19545506 - 19545615
Alignment:
Q  273 ttagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccg 372  Q
    ||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||| ||||||||||||||  |||||||||||||||||||||||||||    
T  19545506 ttagtgagggaaatttagtgaggaaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 19545605  T
Q  373 tcactaattt 382  Q
    ||||||||||    
T  19545606 tcactaattt 19545615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 251 - 412
Target Start/End: Complemental strand, 23217369 - 23217208
Alignment:
Q  251 atcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaattt 350  Q
    ||||||| ||| |||  ||||||| |||||| |||||||| ||||||||||||||||||||||| ||||||||||||| ||||||| |||||   |||||    
T  23217369 atcactaataaaaaagcaaaaattggtgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcactaaattttgggaccatagaattt 23217270  T
Q  351 gtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||||||||| ||||||||| ||| ||||||||||| |||||||| |||||| ||||||||    
T  23217269 gtgaggaatttgattttttccctcattaatttccctccctaatttttctttttttagtagtg 23217208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 268 - 412
Target Start/End: Original strand, 21020056 - 21020200
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    ||||||||||||||| | |||||||||||||||| | |||||| ||| ||||||||||||| |||||||| |||||  ||||||||||  |||| |||||    
T  21020056 aaaaattagtgagggcagtttagtgagggaaaacataaaatccttctctaattccgtcactaaattttgcaaccaaggaatttgtgagagattttatttt 21020155  T
Q  368 ttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    |||||||||||||||||||| |||||||||||||| |||||||||    
T  21020156 ttccgtcactaatttccctccctaattttgcttttcctagtagtg 21020200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 268 - 412
Target Start/End: Original strand, 49915442 - 49915586
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||||||||||| || |||||||| ||| |||| || ||    
T  49915442 aaaaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgactaagaaatttgttagggattttatgtt 49915541  T
Q  368 ttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||||||| ||||||||||  ||||||| |||||  ||||||||    
T  49915542 ttccgtcacaaatttccctctttaattttacttttcttagtagtg 49915586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 268 - 411
Target Start/End: Original strand, 27968906 - 27969049
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    |||||||||||| ||||||||||||||||||||| |||||||||||| |||||| |||| | |||||||||||||| |||  ||||||  |||| ||||     
T  27968906 aaaaattagtgacggaaatttagtgagggaaaacatgaaatccctctctaattctgtcattaaattttgcgaccaacaaaggtgtgagagattttatttg 27969005  T
Q  368 ttccgtcactaatttccctcgctaattttgctttttctagtagt 411  Q
    |||||||||||||||||||| || ||||||||||||||||||||    
T  27969006 ttccgtcactaatttccctccctgattttgctttttctagtagt 27969049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 287 - 413
Target Start/End: Complemental strand, 15064117 - 15063991
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    ||||||||||||||| ||||||| |||| ||||||||||||| ||||||||||||||  |||||||||||||||| || ||||||||||| |||||||||    
T  15064117 ttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcacaaatttccct 15064018  T
Q  387 cgctaattttgctttttctagtagtgt 413  Q
    | |||||||||||||| ||||||||||    
T  15064017 ccctaattttgcttttcctagtagtgt 15063991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 283 - 396
Target Start/End: Original strand, 28859597 - 28859710
Alignment:
Q  283 aaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaattt 382  Q
    ||||||||||||| ||||||| |||||||||| ||||||||||||| |||||||| |||||  |||||||||||||||||||||||||||||||||||||    
T  28859597 aaatttagtgaggtaaaacgtaaaatccctctctaattccgtcactaaattttgcaaccaaggaatttgtgaggaatttcattttttccgtcactaattt 28859696  T
Q  383 ccctcgctaatttt 396  Q
     |||||||||||||    
T  28859697 tcctcgctaatttt 28859710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 253 - 412
Target Start/End: Complemental strand, 36564598 - 36564439
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  ||||||||||||||||||||| |||||||||| | |||||||||||| ||||| ||||||| |||| |||||||||  ||| |||    
T  36564598 cactactaaaaaaacaaaaattagtgagggaaattttgtgagggaaagcatgaaatccctctctaatttcgtcactaaattctgcgaccaaagaatctgt 36564499  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
     ||| |||| ||||||||| |||||||||| |||| |||||||| |||||||||||||||    
T  36564498 cagggattttattttttccatcactaattttcctccctaatttttctttttctagtagtg 36564439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 287 - 412
Target Start/End: Complemental strand, 21490159 - 21490034
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    |||||||||||||| || |||||||||| |||||| |||||| ||||||||||||||  |||||||||| ||||||||||||||||||| | ||||||||    
T  21490159 ttagtgagggaaaatgtaaaatccctctctaattctgtcactaaattttgcgaccaaggaatttgtgagaaatttcattttttccgtcattgatttccct 21490060  T
Q  387 cgctaattttgctttttctagtagtg 412  Q
    | ||||||||| ||||||||||||||    
T  21490059 cactaattttgttttttctagtagtg 21490034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 268 - 412
Target Start/End: Original strand, 31433728 - 31433872
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    ||||||||||||||||| |||||  |||||||||||||||| ||||| ||||||||||||| |||||| |||||||  |||||||||| ||||| |||||    
T  31433728 aaaaattagtgagggaattttagaaagggaaaacgtgaaattcctctctaattccgtcactaaattttacgaccaaggaatttgtgagaaattttatttt 31433827  T
Q  368 ttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    |||  ||||||||||||||  |||||||| |||||| ||||||||    
T  31433828 ttctatcactaatttccctatctaattttactttttttagtagtg 31433872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 268 - 382
Target Start/End: Complemental strand, 27212925 - 27212811
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||||| ||  ||||||||||| |||| |||||    
T  27212925 aaaaattagtgagggaaatttagagaggaaaaacgtgaaatccctctttaattccgtcactaaattttgcgactaaagaatttgtgagggattttatttt 27212826  T
Q  368 ttccgtcactaattt 382  Q
    |||  ||||||||||    
T  27212825 ttctatcactaattt 27212811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 287 - 412
Target Start/End: Complemental strand, 6088353 - 6088228
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    ||||||||||||||||| |||||| ||| ||||||||| | | ||||||| ||||||  ||||| |||||||||||||||||||||||||||||||||||    
T  6088353 ttagtgagggaaaacgtaaaatccatctctaattccgttattaaattttgtgaccaaggaatttctgaggaatttcattttttccgtcactaatttccct 6088254  T
Q  387 cgctaattttgctttttctagtagtg 412  Q
      || |||||||||||||||||||||    
T  6088253 tacttattttgctttttctagtagtg 6088228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 287 - 412
Target Start/End: Complemental strand, 17269729 - 17269604
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    ||||||||| ||||  |||||||||||| ||||||||||||| |||||||||| |||  |||||||||||||||| ||||||||| ||  |||||||| |    
T  17269729 ttagtgaggaaaaatatgaaatccctctctaattccgtcactaaattttgcgatcaaagaatttgtgaggaattttattttttccatcgttaatttccat 17269630  T
Q  387 cgctaattttgctttttctagtagtg 412  Q
    ||||||||||||||||||||||||||    
T  17269629 cgctaattttgctttttctagtagtg 17269604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 268 - 412
Target Start/End: Original strand, 29451085 - 29451230
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    ||||||||| ||| |||||||||||||||||||||| |||||||||| |||||||||| |  |||||||| ||  |  ||||| |||| |||||||||||    
T  29451085 aaaaattagcgagagaaatttagtgagggaaaacgtaaaatccctctctaattccgtcccaaaattttgcaactgaggaatttatgagaaatttcatttt 29451184  T
Q  368 ttccgtcactaatttccctcgctaattttg-ctttttctagtagtg 412  Q
    ||||||||||||||||||||| ||||||||  ||||||||||||||    
T  29451185 ttccgtcactaatttccctcgttaattttgtttttttctagtagtg 29451230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 290 - 382
Target Start/End: Original strand, 6718723 - 6718815
Alignment:
Q  290 gtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaattt 382  Q
    ||||||||||||||||||||||| | ||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  6718723 gtgagggaaaacgtgaaatccctttctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 6718815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 283 - 412
Target Start/End: Complemental strand, 10772183 - 10772053
Alignment:
Q  283 aaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttca-ttttttccgtcactaatt 381  Q
    ||||||||||||||||||  |||||||||||| ||||| ||||| | ||||||||||| || |||||||||| ||||| || ||||||| ||||||||||    
T  10772183 aaatttagtgagggaaaatatgaaatccctctctaatttcgtcattaaattttgcgactaaaaaatttgtgaagaattccatttttttctgtcactaatt 10772084  T
Q  382 tccctcgctaattttgctttttctagtagtg 412  Q
    ||||||| ||||||| |||||||||||||||    
T  10772083 tccctcgttaattttactttttctagtagtg 10772053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 287 - 412
Target Start/End: Original strand, 5744426 - 5744551
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    ||||||||||||||| ||||||| |||| ||||||||||||| ||||||||||| ||  ||||||||||| |||| || ||||||||||| ||||| |||    
T  5744426 ttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggcattttatgttttccgtcacaaattttcct 5744525  T
Q  387 cgctaattttgctttttctagtagtg 412  Q
    | |||||||||||||| |||||||||    
T  5744526 ccctaattttgcttttcctagtagtg 5744551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 287 - 412
Target Start/End: Original strand, 5781385 - 5781510
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    ||||||||||||||| ||||||| |||| ||||||||||||| ||||||||||| ||  ||||||||||| |||| || ||||||||||| ||||| |||    
T  5781385 ttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggcattttatgttttccgtcacaaattttcct 5781484  T
Q  387 cgctaattttgctttttctagtagtg 412  Q
    | |||||||||||||| |||||||||    
T  5781485 ccctaattttgcttttcctagtagtg 5781510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 287 - 412
Target Start/End: Complemental strand, 46012853 - 46012728
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    ||||||||||||||| |||||||||||| |||||  |||||| |||||||||| |||  ||||||||||  |||| |||||||||||||||||||| |||    
T  46012853 ttagtgagggaaaacatgaaatccctctctaattttgtcactaaattttgcgatcaaggaatttgtgagagattttattttttccgtcactaattttcct 46012754  T
Q  387 cgctaattttgctttttctagtagtg 412  Q
    | || |||||||||||||||||||||    
T  46012753 ccctgattttgctttttctagtagtg 46012728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 283 - 412
Target Start/End: Complemental strand, 47263394 - 47263265
Alignment:
Q  283 aaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaattt 382  Q
    ||||||||||||||||||||| ||||  || | ||| || |||||| ||||||||||||||  |||||||||||||||| |||||||| ||||| |||||    
T  47263394 aaatttagtgagggaaaacgtaaaatttctatctaactctgtcactaaattttgcgaccaaggaatttgtgaggaatttaattttttctgtcaccaattt 47263295  T
Q  383 ccctcgctaattttgctttttctagtagtg 412  Q
    || ||| |||||||||||||||||||||||    
T  47263294 ccttcgttaattttgctttttctagtagtg 47263265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 287 - 412
Target Start/End: Complemental strand, 50665761 - 50665636
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    ||||||||||||||| |||||||||||| ||||| ||||||| |||||||||| |||  |||||||||||||||| || ||||||||||  |||||||||    
T  50665761 ttagtgagggaaaacatgaaatccctctctaatttcgtcactaaattttgcgatcaaagaatttgtgaggaattttatgttttccgtcataaatttccct 50665662  T
Q  387 cgctaattttgctttttctagtagtg 412  Q
    | ||||||||||||||  ||||||||    
T  50665661 ctctaattttgcttttcttagtagtg 50665636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 283 - 414
Target Start/End: Original strand, 21088758 - 21088887
Alignment:
Q  283 aaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaattt 382  Q
    ||||||||||||||||||| ||||||||||||  ||||||||||   ||||||||||||||  ||||||||||  |||| ||||||||||||||||||||    
T  21088758 aaatttagtgagggaaaacatgaaatccctctcgaattccgtcatcaaattttgcgaccaaggaatttgtgag--attttattttttccgtcactaattt 21088855  T
Q  383 ccctcgctaattttgctttttctagtagtgta 414  Q
    ||||| |||| |||||||||  ||||||||||    
T  21088856 ccctccctaactttgcttttcttagtagtgta 21088887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 268 - 396
Target Start/End: Complemental strand, 20615487 - 20615359
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    ||||||||||||||||||||||| || |||||||||||||| ||||| |||||| |||| | |||||| ||||||| |||||||||||  |||| |||||    
T  20615487 aaaaattagtgagggaaatttagagaaggaaaacgtgaaattcctctctaattctgtcattaaattttacgaccaaaaaatttgtgagatattttatttt 20615388  T
Q  368 ttccgtcactaatttccctcgctaatttt 396  Q
    ||||||| ||||||| ||||  |||||||    
T  20615387 ttccgtctctaattttcctccttaatttt 20615359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 251 - 414
Target Start/End: Complemental strand, 27182817 - 27182656
Alignment:
Q  251 atcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaattt 350  Q
    |||| |||||| |||  |||||| |||||| ||||||||||||||||||||  |||||| |||| ||||| ||||||| ||| ||| ||||||   ||||    
T  27182817 atcagtactaaaaaaacaaaaatgagtgagagaaatttagtgagggaaaacaagaaatctctctctaatttcgtcactaaatcttgtgaccaagggattt 27182718  T
Q  351 gtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgta 414  Q
    |||||| |||| |||||||  |||||||||||||||| ||||||||| |||| |||||||||||    
T  27182717 gtgagggattttatttttt--gtcactaatttccctccctaattttgtttttcctagtagtgta 27182656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 277 - 407
Target Start/End: Complemental strand, 26963384 - 26963254
Alignment:
Q  277 tgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcac 376  Q
    |||||||||||||||||||||||| || |||| ||||| ||||||||| ||| |||||| | |||||   |||||| |  ||||||||||||| ||||||    
T  26963384 tgagggaaatttagtgagggaaaatgtaaaattcctctctaattccgttactaaattttacaaccaaagtatttgtaaaaaatttcattttttacgtcac 26963285  T
Q  377 taatttccctcgctaattttgctttttctag 407  Q
    |||||||||||| |||||||| |||||||||    
T  26963284 taatttccctcgttaattttgttttttctag 26963254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 303 - 412
Target Start/End: Original strand, 37283549 - 37283658
Alignment:
Q  303 tgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttt 402  Q
    |||||||||||| ||||||||||||| ||||||  ||||||  |||||||||||||||| || ||||||||||| |||||||||| ||||||||||||||    
T  37283549 tgaaatccctctctaattccgtcactaaattttatgaccaaggaatttgtgaggaattttatgttttccgtcacaaatttccctccctaattttgctttt 37283648  T
Q  403 tctagtagtg 412  Q
     ||| |||||    
T  37283649 cctaatagtg 37283658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 317 - 412
Target Start/End: Complemental strand, 20762045 - 20761950
Alignment:
Q  317 aattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||| |||||| ||||||||||||||  ||||||||||  |||| ||||||||||||||||||||||||| || |||||||||||||||||||||    
T  20762045 aattctgtcactaaattttgcgaccaaggaatttgtgagagattttattttttccgtcactaatttccctccctgattttgctttttctagtagtg 20761950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 268 - 413
Target Start/End: Original strand, 20088391 - 20088541
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    |||||| |||||| |||||||||||||| ||||| |||||||| ||| ||||||| ||||| ||||||| ||||||  ||||| |||| ||||| |||||    
T  20088391 aaaaatcagtgagagaaatttagtgaggcaaaacatgaaatccttctctaattccatcactaaattttgtgaccaaagaatttatgagaaattttatttt 20088490  T
Q  368 t-----tccgtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    |     |  ||| |||||||||||| |||||||| ||||||||||||||||    
T  20088491 tttatatatgtcgctaatttccctctctaattttactttttctagtagtgt 20088541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 283 - 412
Target Start/End: Complemental strand, 15501681 - 15501551
Alignment:
Q  283 aaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttttt-ccgtcactaatt 381  Q
    ||||||| || ||||||| || |||| | ||| |||||||||| || |||||| ||| ||| |||||| ||| |||||||||||||| |||||| |||||    
T  15501681 aaatttaatgtgggaaaatgtaaaattcatctctaattccgtccctaaattttacgatcaagaaatttatgaagaatttcatttttttccgtcattaatt 15501582  T
Q  382 tccctcgctaattttgctttttctagtagtg 412  Q
    |  |||||||||||| |||||||||||||||    
T  15501581 tttctcgctaattttactttttctagtagtg 15501551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 316 - 413
Target Start/End: Complemental strand, 6447342 - 6447245
Alignment:
Q  316 taattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    |||||| |||||| || |||| ||||||  ||| || ||||||||| ||||||||| ||||||||||||||| |||||||||||||| ||||||||||    
T  6447342 taattctgtcactaaactttgagaccaaagaatctgcgaggaattttattttttccatcactaatttccctccctaattttgcttttcctagtagtgt 6447245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 295 - 413
Target Start/End: Original strand, 13615433 - 13615551
Alignment:
Q  295 ggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccctcgctaatt 394  Q
    |||||||||||||| ||||| ||||| | ||||| |||||||||   || ||||||||||||  ||| |||| ||||||||||| ||| | |  ||||||    
T  13615433 ggaaaacgtgaaattcctctctaatttcatcactaaattttgcggttaagaaatttgtgaggggttttatttcttccgtcactatttttctttcctaatt 13615532  T
Q  395 ttgctttttctagtagtgt 413  Q
    |||||||||||| ||||||    
T  13615533 ttgctttttctaatagtgt 13615551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 287 - 362
Target Start/End: Complemental strand, 23233288 - 23233213
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttc 362  Q
    |||||||||||||||||||||| |||||  |||||| ||||| ||||||||||||||   ||||||||| ||||||    
T  23233288 ttagtgagggaaaacgtgaaattcctctcaaattccttcactaaattttgcgaccaaagtatttgtgagaaatttc 23233213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 295 - 381
Target Start/End: Complemental strand, 27711285 - 27711199
Alignment:
Q  295 ggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatt 381  Q
    ||||||| ||||||  |||| ||||||||||||| |||||||||||||| || ||||| ||| | || ||||||||| |||||||||    
T  27711285 ggaaaacatgaaatttctctctaattccgtcactaaattttgcgaccaaaaagtttgtaagggaatttattttttccttcactaatt 27711199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 369 - 410
Target Start/End: Original strand, 11386427 - 11386468
Alignment:
Q  369 tccgtcactaatttccctcgctaattttgctttttctagtag 410  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  11386427 tccgtcactaatttccatcgctaattttgctttttctagtag 11386468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 283 - 328
Target Start/End: Complemental strand, 35579654 - 35579609
Alignment:
Q  283 aaatttagtgagggaaaacgtgaaatccctctttaattccgtcact 328  Q
    ||||||||||||||||||||| |||||||||| |||||||||||||    
T  35579654 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcact 35579609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 287 - 382
Target Start/End: Original strand, 50240756 - 50240851
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaattt 382  Q
    ||||||||||| ||| ||||||| |||| |||||  || ||| ||||||||| ||||  ||||| ||||  |||| ||||||||||||||||||||    
T  50240756 ttagtgagggataacatgaaatctctctctaattatgttactaaattttgcgtccaaggaatttatgagagattttattttttccgtcactaattt 50240851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 378 - 416
Target Start/End: Complemental strand, 23233218 - 23233180
Alignment:
Q  378 aatttccctcgctaattttgctttttctagtagtgtatc 416  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  23233218 aatttccctccctaattttgctttttctaatagtgtatc 23233180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 345 - 407
Target Start/End: Complemental strand, 40287547 - 40287486
Alignment:
Q  345 aaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctag 407  Q
    |||||||||||  |||||| |||| |||||  |||||||||| ||||||||||||||||||||    
T  40287547 aaatttgtgagagatttcaatttt-ccgtctataatttcccttgctaattttgctttttctag 40287486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 283 - 401
Target Start/End: Original strand, 45304340 - 45304458
Alignment:
Q  283 aaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaattt 382  Q
    ||||||||||||| ||||  ||||||  || || |||||||||| | |||||||  || ||  || |||| |||||||| ||||||||||||| ||||||    
T  45304340 aaatttagtgaggaaaaatatgaaatttcttttaaattccgtcattaaattttgtaactaaagaaattgttaggaattttattttttccgtcattaattt 45304439  T
Q  383 ccctcgctaattttgcttt 401  Q
    | |||  | ||||||||||    
T  45304440 ctctccttgattttgcttt 45304458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 125; Significance: 4e-64; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 251 - 415
Target Start/End: Original strand, 19581 - 19745
Alignment:
Q  251 atcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaattt 350  Q
    ||||||||||| |||  |||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||  |||||    
T  19581 atcactactaaaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaattt 19680  T
Q  351 gtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgtat 415  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  19681 gtgaggaatttcattttttccgtcactaatttcccttgctaattttgctttttctagtagtgtat 19745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 124; Significance: 2e-63; HSPs: 63)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 253 - 412
Target Start/End: Original strand, 12045707 - 12045866
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  |||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||| |||||| ||||||| ||||||||    
T  12045707 cactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacgtaaaatccttctctaattccgtcactaaattttacgaccaagaaatttgt 12045806  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12045807 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 12045866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 250 - 403
Target Start/End: Original strand, 23975612 - 23975765
Alignment:
Q  250 aatcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatt 349  Q
    |||||||||||| |||  ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||||  |||||    
T  23975612 aatcactactaaaaaaataaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatt 23975711  T
Q  350 tgtgaggaatttcattttttccgtcactaatttccctcgctaattttgcttttt 403  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23975712 tgtgaggaatttcattttttccgtcactaatttccctcgctaattttgcttttt 23975765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 268 - 413
Target Start/End: Original strand, 618289 - 618434
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||  ||||||||||||||||||||||    
T  618289 aaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcatttt 618388  T
Q  368 ttccgtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||    
T  618389 ttccgtcactaatttccctcgctaattttgctttttctaatagtgt 618434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 251 - 412
Target Start/End: Original strand, 15060951 - 15061112
Alignment:
Q  251 atcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaattt 350  Q
    ||||||||||| |||  ||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||| |||||||||||||  ||||||    
T  15060951 atcactactaaaaaaacaaaaattagtgagggaaattttgtgaggaaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaattt 15061050  T
Q  351 gtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  15061051 gtgaggaatttcattttttcggtcactaatttccctcgctaattttgctttttctggtagtg 15061112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 251 - 416
Target Start/End: Complemental strand, 17039792 - 17039627
Alignment:
Q  251 atcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaattt 350  Q
    ||||||||||| |||   ||| |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||  |||||    
T  17039792 atcactactaaaaaaactaaatttagtgagggaaatatagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaggaattt 17039693  T
Q  351 gtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgtatc 416  Q
    |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  17039692 gtgaggaatttcattttttccgtcactaattttcctcactaattttgctttttctagtagtgtatc 17039627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 253 - 413
Target Start/End: Complemental strand, 16121998 - 16121838
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  |||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||| ||||||| ||||||  |||||||    
T  16121998 cactactaaaaaaccaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgtgaccaaggaatttgt 16121899  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16121898 gaggaattttattttttccgtcactaatttccctcgctaattttgctttttctagtagtgt 16121838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 252 - 412
Target Start/End: Original strand, 36196373 - 36196533
Alignment:
Q  252 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttg 351  Q
    |||||||||| |||  ||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||||||||| |||||||||||||   | ||||    
T  36196373 tcactactaaaaaaacaaaaattagtgagggaaattttgtgagggaaaatgtgaaatccctctctaattccgtcactaaattttgcgaccatggattttg 36196472  T
Q  352 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36196473 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 36196533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 251 - 415
Target Start/End: Complemental strand, 33818722 - 33818558
Alignment:
Q  251 atcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaattt 350  Q
    ||||||||||| |||  |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||  |||||    
T  33818722 atcactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaattt 33818623  T
Q  351 gtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgtat 415  Q
    ||||||||||| || ||||||||||| |||||||||| | |||||||||||||||||||||||||    
T  33818622 gtgaggaattttatgttttccgtcacaaatttccctccccaattttgctttttctagtagtgtat 33818558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 253 - 412
Target Start/End: Original strand, 7888777 - 7888936
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  |||||||||||||| ||||||||||||||||||||| |||||||||| ||| ||||||||| |||||| |||||||  |||||||    
T  7888777 cactactaaaaaaacaaaaattagtgaggaaaatttagtgagggaaaacgtaaaatccctctctaactccgtcactaaattttacgaccaaggaatttgt 7888876  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  7888877 gaggaatttcattttttccgtcaataatttccctcgctaattttgctttttctagtagtg 7888936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 253 - 412
Target Start/End: Complemental strand, 8887010 - 8886851
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  ||||||||||||||||||||||||||||||||| || |||||||||| ||||||||||||| ||||||||||||||  |||||||    
T  8887010 cactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaatgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgt 8886911  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||||||||||||||| |||||| ||||| |||||||||||||||||||||||||||||    
T  8886910 gaggaatttcatttttttcgtcacaaattttcctcgctaattttgctttttctagtagtg 8886851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 268 - 413
Target Start/End: Complemental strand, 12328370 - 12328225
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    |||||||||||||||| ||||||||||||||||| |||||| ||||| ||||||||||||| |||||||||| ||| |||||||||||||||||||||||    
T  12328370 aaaaattagtgagggatatttagtgagggaaaacatgaaattcctctctaattccgtcactaaattttgcgatcaagaaatttgtgaggaatttcatttt 12328271  T
Q  368 ttccgtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||    
T  12328270 ttccgttactaatttccctcactaattttgctttttctagtagtgt 12328225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 268 - 412
Target Start/End: Complemental strand, 8109004 - 8108860
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    ||||||||||||| ||||||| |||||||||||| |||||| ||||| ||||||||||||| |||||||||||||  |||||||||||||||||||||||    
T  8109004 aaaaattagtgagagaaattttgtgagggaaaacatgaaattcctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcatttt 8108905  T
Q  368 ttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  8108904 ttccgtcactaatttccctctctaattttgctttttctagtagtg 8108860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 253 - 412
Target Start/End: Complemental strand, 2472873 - 2472714
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  |||||||| ||||||| ||||||||||||||||| |||||||||||| ||||||||||| | ||||||||||||||  |||||||    
T  2472873 cactactaaaaaaacaaaaattaatgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcattaaattttgcgaccaaggaatttgt 2472774  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  2472773 gaggaatttcattttttccgtcactaatttccttcactaattttgctttttctagtagtg 2472714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 287 - 413
Target Start/End: Complemental strand, 746993 - 746867
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  746993 ttagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 746894  T
Q  387 cgctaattttgctttttctagtagtgt 413  Q
    ||||||||||||||||||| |||||||    
T  746893 cgctaattttgctttttcttgtagtgt 746867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 273 - 412
Target Start/End: Original strand, 23408980 - 23409120
Alignment:
Q  273 ttagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttca-ttttttcc 371  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||| ||| ||||||||||||||||||| ||||||||    
T  23408980 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgatcaagaaatttgtgaggaatttcatttttttcc 23409079  T
Q  372 gtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    |||||||||||  ||||||||||||||||||||||||||||    
T  23409080 gtcactaatttttctcgctaattttgctttttctagtagtg 23409120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 253 - 413
Target Start/End: Complemental strand, 35620502 - 35620343
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  |||||||| ||||||| ||||||||||||||||| |||||||| ||| ||||||||||||| ||||||||||||||  |||||||    
T  35620502 cactactaaaaaaacaaaaattaatgagggatatttagtgagggaaaacatgaaatccttctctaattccgtcactaaattttgcgaccaaggaatttgt 35620403  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  35620402 gaggaattt-attttttccgtcactaatttccctcgctaattttgctttttctaatagtgt 35620343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 253 - 412
Target Start/End: Complemental strand, 13974237 - 13974078
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  ||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||| |||||  ||||||  ||||||||    
T  13974237 cactactaaaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctgattccgtcactaaatttcacgaccatgaaatttgt 13974138  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    || |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  13974137 gaagaatttcatttttttcgtcgctaatttccctcgctaattttgctttttctagtagtg 13974078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 268 - 413
Target Start/End: Complemental strand, 28265619 - 28265474
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    |||||||| |||||||||||| ||||||||| |||| |||||||||| ||||||||||||| |||||||||||||   ||||||||||||||||||||||    
T  28265619 aaaaattaatgagggaaattttgtgagggaagacgtaaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcatttt 28265520  T
Q  368 ttccgtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||||    
T  28265519 ttccgtcactaattttcctcgctaattttactttttctagtagtgt 28265474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 287 - 412
Target Start/End: Complemental strand, 38837796 - 38837671
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    ||||||||||||||||| |||||||||| ||||||| ||||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  38837796 ttagtgagggaaaacgtaaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 38837697  T
Q  387 cgctaattttgctttttctagtagtg 412  Q
    ||||||||||||||||||||||||||    
T  38837696 cgctaattttgctttttctagtagtg 38837671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 252 - 412
Target Start/End: Complemental strand, 36832050 - 36831890
Alignment:
Q  252 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttg 351  Q
    |||||||||| |||  ||||||||||||||||||||||||||||||||| || |||||||||| ||||||| ||||| ||||||| ||||||  |||||     
T  36832050 tcactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaatgtaaaatccctctctaattccatcactaaattttgtgaccaaggaattta 36831951  T
Q  352 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    |||||||||||||||||| |||| |||||||||||| ||||||||||||||||||||||||    
T  36831950 tgaggaatttcatttttttcgtccctaatttccctcactaattttgctttttctagtagtg 36831890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 287 - 413
Target Start/End: Original strand, 10494751 - 10494877
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    ||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  10494751 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 10494850  T
Q  387 cgctaattttgctttttctagtagtgt 413  Q
    |||||  ||||||||||||||||||||    
T  10494851 cgctacatttgctttttctagtagtgt 10494877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 287 - 412
Target Start/End: Complemental strand, 4125313 - 4125188
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    |||||||||||||| |||||||| |||| ||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  4125313 ttagtgagggaaaatgtgaaatctctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccct 4125214  T
Q  387 cgctaattttgctttttctagtagtg 412  Q
    |||||||||| |||||||||||||||    
T  4125213 cgctaattttactttttctagtagtg 4125188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 256 - 412
Target Start/End: Original strand, 5982628 - 5982785
Alignment:
Q  256 tactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgag 355  Q
    |||||| |||| |||||||| ||||| ||||||||||||||||||| | |||||||||| ||||||||||||| || |||||||||||  ||||||||||    
T  5982628 tactaaaaaatcaaaaattaatgaggaaaatttagtgagggaaaacctaaaatccctctctaattccgtcactaaactttgcgaccaaggaatttgtgag 5982727  T
Q  356 gaatttca-ttttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||| || ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  5982728 gaattccatttttttccgtcactaatttccctcgctgattttgctttttctagtagtg 5982785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 283 - 412
Target Start/End: Complemental strand, 26708714 - 26708585
Alignment:
Q  283 aaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaattt 382  Q
    ||||||||||||||||||||| |||| ||||| ||||||||||||| ||||||||||||||  ||||||||||||||||||||||||||| |||||||||    
T  26708714 aaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccggcactaattt 26708615  T
Q  383 ccctcgctaattttgctttttctagtagtg 412  Q
    |||||||||||||||| |||||||||||||    
T  26708614 ccctcgctaattttgcattttctagtagtg 26708585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 283 - 412
Target Start/End: Complemental strand, 26978448 - 26978319
Alignment:
Q  283 aaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaattt 382  Q
    ||||||||||||||||||||| |||| ||||| ||||||||||||| ||||||||||||||  ||||||||||||||||||||||||||| |||||||||    
T  26978448 aaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccggcactaattt 26978349  T
Q  383 ccctcgctaattttgctttttctagtagtg 412  Q
    |||||||||||||||| |||||||||||||    
T  26978348 ccctcgctaattttgcattttctagtagtg 26978319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 253 - 413
Target Start/End: Complemental strand, 13620286 - 13620126
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  |||||||||||| ||||||||||||||||||||| |||||||||||| |||||| |||||  |||||||||||||| ||||||||    
T  13620286 cactactaaaaaaataaaaattagtgacggaaatttagtgagggaaaacatgaaatccctctctaattctgtcacaaaattttgcgaccaacaaatttgt 13620187  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    |||  |||| ||||||||||||||||||||||||| || ||||| ||||||||||||||||    
T  13620186 gagagattttattttttccgtcactaatttccctccctgatttttctttttctagtagtgt 13620126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 251 - 415
Target Start/End: Original strand, 17986707 - 17986871
Alignment:
Q  251 atcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaattt 350  Q
    ||||||||||| |||  |||||||||||||||| ||||||||||||||||| |||||| | ||| ||||||||||||| ||||||||||| ||  |||||    
T  17986707 atcactactaaaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaattcttctctaattccgtcactaaattttgcgacgaaggaattt 17986806  T
Q  351 gtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgtat 415  Q
    |||| |||||||||||||||||||||||||||| ||| |||||||| |||||||||| |||||||    
T  17986807 gtgaagaatttcattttttccgtcactaatttctctcactaattttactttttctagcagtgtat 17986871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 253 - 412
Target Start/End: Complemental strand, 25652742 - 25652583
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  |||| || ||||||||||||||||||||||||| || |||||||||| ||||||||||||  ||||||||||| ||  |||||||    
T  25652742 cactactaaaaaaacaaaatttggtgagggaaatttagtgagggaaaatgtaaaatccctctctaattccgtcacaaaattttgcgactaaggaatttgt 25652643  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||||||| |||||    
T  25652642 gaggaatttcattttttctgtcactgatttccctcgctaattttgctttttctaatagtg 25652583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 253 - 412
Target Start/End: Complemental strand, 36716359 - 36716200
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  |||||||||||||| |||||| ||||||||||||||||||||| ||| ||||||| ||| | |||||| ||||||   |||||||    
T  36716359 cactactaaaaaaacaaaaattagtgaggaaaattttgtgagggaaaacgtgaaatccttctctaattccttcattaaattttacgaccatagaatttgt 36716260  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  36716259 gaggaatttcattttttccatcactaatttccctcgctaattttgttttttctagtagtg 36716200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 263 - 413
Target Start/End: Complemental strand, 23423905 - 23423755
Alignment:
Q  263 aaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttc 362  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||||| |||||||| |||||  ||||||||||||||||     
T  23423905 aaataaaaaattagtgagtgaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcaaccaaggaatttgtgaggaatttt 23423806  T
Q  363 attttttccgtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    || |||| |||||| |||||||||| |||||||||||| | ||||||||||    
T  23423805 atgtttttcgtcacaaatttccctccctaattttgcttatcctagtagtgt 23423755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 251 - 415
Target Start/End: Complemental strand, 7003888 - 7003727
Alignment:
Q  251 atcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaattt 350  Q
    ||||||||||| ||| ||| | |||||||||||||||| |||||||||||||||||||| ||||  |||||||||||| |||||||||| ||   |||||    
T  7003888 atcactactaaaaaacaaata-ttagtgagggaaattttgtgagggaaaacgtgaaatctctct--aattccgtcactaaattttgcgatcatggaattt 7003792  T
Q  351 gtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgtat 415  Q
    |||||||||||  |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  7003791 gtgaggaattttcttttttccgtcactaatttccctcgctaattttgttttttctagtagtgtat 7003727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 287 - 412
Target Start/End: Complemental strand, 16631999 - 16631874
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    ||||||| ||||||||| |||||||||| ||||||||||||| ||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||    
T  16631999 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgtgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 16631900  T
Q  387 cgctaattttgctttttctagtagtg 412  Q
    |||||||||| |||||||||||||||    
T  16631899 cgctaatttttctttttctagtagtg 16631874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 255 - 415
Target Start/End: Original strand, 20959490 - 20959650
Alignment:
Q  255 ctactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtga 354  Q
    ||||||| |||  ||||||||||||||||||||||| |||||||||||||||||| |||| ||||||||||||| |||||| |||| ||  |||||||||    
T  20959490 ctactaaaaaagtaaaaattagtgagggaaatttagagagggaaaacgtgaaatctctctctaattccgtcactaaattttacgactaaggaatttgtga 20959589  T
Q  355 ggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgtat 415  Q
    ||||||| ||||||||||||| | |||| |||| |||||||| ||||||||||||||||||    
T  20959590 ggaattttattttttccgtcagtgattttcctccctaattttactttttctagtagtgtat 20959650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 283 - 414
Target Start/End: Complemental strand, 24138970 - 24138839
Alignment:
Q  283 aaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaattt 382  Q
    ||||||||||||||||||||| ||||| |||| ||||||||||||| ||||||||||||||  |||||||||| |||||||||||||||||||| |||||    
T  24138970 aaatttagtgagggaaaacgtaaaatctctctctaattccgtcactaaattttgcgaccaagcaatttgtgagaaatttcattttttccgtcaccaattt 24138871  T
Q  383 ccctcgctaattttgctttttctagtagtgta 414  Q
     ||||||||||||||||||||||| |||||||    
T  24138870 tcctcgctaattttgctttttctaatagtgta 24138839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 253 - 412
Target Start/End: Complemental strand, 27428171 - 27428012
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| ||| ||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||  ||||| |    
T  27428171 cactactaaaaaagaaaaaattagtgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttat 27428072  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
     || ||||| ||||||| ||||||||||||||||| |||||||| |||||  ||||||||    
T  27428071 tagcaattttatttttttcgtcactaatttccctccctaatttttcttttattagtagtg 27428012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 287 - 413
Target Start/End: Original strand, 40484058 - 40484184
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    ||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||  ||||| | || ||||||||| ||||||||||||||||||||    
T  40484058 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttataagaaatttcattatttccgtcactaatttccct 40484157  T
Q  387 cgctaattttgctttttctagtagtgt 413  Q
    |||||||||| ||||||||||||||||    
T  40484158 cgctaatttttctttttctagtagtgt 40484184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 267 - 414
Target Start/End: Complemental strand, 10420397 - 10420250
Alignment:
Q  267 aaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattt 366  Q
    ||||||||||||||| || ||||| |||||||||| |||||||||||| |||||  |||||| |||||||||||||| ||| |||||||| |||| ||||    
T  10420397 aaaaaattagtgaggaaattttagagagggaaaacatgaaatccctctctaattttgtcactaaattttgcgaccaacaaaattgtgagggattttattt 10420298  T
Q  367 tttccgtcactaatttccctcgctaattttgctttttctagtagtgta 414  Q
    ||||||||||||||||||||| ||||||||| ||| | ||||||||||    
T  10420297 tttccgtcactaatttccctctctaattttgatttctttagtagtgta 10420250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 268 - 414
Target Start/End: Complemental strand, 17036556 - 17036410
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    ||||||| ||||||| ||||||| |||||||||||  |||||||||| |||||| |||||| ||||||||||||||  |||||||||||||||| ||||     
T  17036556 aaaaatttgtgagggtaatttagagagggaaaacgcaaaatccctctctaattctgtcactaaattttgcgaccaaggaatttgtgaggaattttatttc 17036457  T
Q  368 ttccgtcactaatttccctcgctaattttgctttttctagtagtgta 414  Q
    ||||||||||||| || ||| |||||||||| |||||||||||||||    
T  17036456 ttccgtcactaatctcgctccctaattttgcattttctagtagtgta 17036410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 287 - 413
Target Start/End: Complemental strand, 25397913 - 25397787
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    ||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||  ||||||||| |||||| || ||||||||||| |||||||||    
T  25397913 ttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgacgaattttatgttttccgtcacaaatttccct 25397814  T
Q  387 cgctaattttgctttttctagtagtgt 413  Q
    | |||||||||||||| ||||||||||    
T  25397813 ccctaattttgcttttcctagtagtgt 25397787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 268 - 413
Target Start/End: Complemental strand, 25673372 - 25673228
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    |||| |||||||||||||||||||||  |||||| |||||||||||| ||||||||||||||||||||||||||||  ||||||| |||| ||| |||||    
T  25673372 aaaatttagtgagggaaatttagtgacagaaaacatgaaatccctctctaattccgtcactgaattttgcgaccaaagaatttgt-aggagttttatttt 25673274  T
Q  368 ttccgtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    ||||||||||||||| |||| ||||||||  |||| ||||||||||    
T  25673273 ttccgtcactaattttcctccctaatttttattttcctagtagtgt 25673228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 268 - 412
Target Start/End: Complemental strand, 11927930 - 11927786
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    ||||||||||||||||| ||||| || |||||||||||||||||||| ||||||||||||| ||||||||||| ||  ||||||||||| |||| |||||    
T  11927930 aaaaattagtgagggaattttagagacggaaaacgtgaaatccctctctaattccgtcactaaattttgcgacgaagtaatttgtgagggattttatttt 11927831  T
Q  368 ttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    |||| || |||||||  ||| |||||||||||||||||| |||||    
T  11927830 ttccatctctaatttatctccctaattttgctttttctaatagtg 11927786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 287 - 411
Target Start/End: Complemental strand, 17772093 - 17771969
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    ||||||||||||||| | ||||| |||| ||||||||||||| |||||||||| |||  ||||| |||||||||||||||||||||||||||||||||||    
T  17772093 ttagtgagggaaaacataaaatctctctctaattccgtcactaaattttgcgatcaaggaatttttgaggaatttcattttttccgtcactaatttccct 17771994  T
Q  387 cgctaattttgctttttctagtagt 411  Q
    |||| ||||| ||||||||||||||    
T  17771993 cgctgatttttctttttctagtagt 17771969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 252 - 412
Target Start/End: Complemental strand, 20188101 - 20187941
Alignment:
Q  252 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttg 351  Q
    |||||||||| |||  |||||||||||||  |||||||||||| ||||||||  |||| |||| |||||| |||| | |||||||||| |||  ||||||    
T  20188101 tcactactaaaaaaataaaaattagtgagaaaaatttagtgagagaaaacgtagaatcactctctaattctgtcattaaattttgcgatcaaggaatttg 20188002  T
Q  352 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||||| ||| |||||    
T  20188001 tgaggaattttattttttccgtcactaatttccttcgctaattttgcttttgctaatagtg 20187941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 252 - 384
Target Start/End: Complemental strand, 33816918 - 33816786
Alignment:
Q  252 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttg 351  Q
    |||||||||| |||  |||| ||||||||||||||||||||||||||||| |||||| ||| | ||||||||||||| ||||||||||||||  ||||||    
T  33816918 tcactactaaaaaaacaaaagttagtgagggaaatttagtgagggaaaacatgaaattcctttctaattccgtcactaaattttgcgaccaaggaatttg 33816819  T
Q  352 tgaggaatttcattttttccgtcactaatttcc 384  Q
    |||||||||| || ||||| ||||| |||||||    
T  33816818 tgaggaattttatgttttctgtcacaaatttcc 33816786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 268 - 382
Target Start/End: Original strand, 17079400 - 17079514
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    |||||||||||||||||||||||  ||||||||| | |||||||||| ||||||||||||| |||||||||||||| |||||||| ||| |||| |||||    
T  17079400 aaaaattagtgagggaaatttagaaagggaaaacatcaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtaagggattttatttt 17079499  T
Q  368 ttccgtcactaattt 382  Q
    ||||||| |||||||    
T  17079500 ttccgtccctaattt 17079514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 268 - 411
Target Start/End: Complemental strand, 33735116 - 33734974
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    ||||||||||| ||||||||||  |||  ||||| ||||| |||||||||||||||||||| ||||||||||||||  ||||| ||||| |||| |||||    
T  33735116 aaaaattagtgggggaaatttatagaga-aaaacatgaaacccctctttaattccgtcactaaattttgcgaccaaggaatttatgagggattttatttt 33735018  T
Q  368 ttccgtcactaatttccctcgctaattttgctttttctagtagt 411  Q
    |||| ||| |||||| |||| |||||||||||||| ||||||||    
T  33735017 ttccctcattaattttcctccctaattttgcttttcctagtagt 33734974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 269 - 402
Target Start/End: Complemental strand, 32726869 - 32726736
Alignment:
Q  269 aaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttt 368  Q
    ||||||||||| |||||||||| ||||||||| |||||||  |||| ||||||||||||| ||||||||||||||  ||||||| | |  ||| || |||    
T  32726869 aaaattagtgaaggaaatttagagagggaaaatgtgaaatttctctctaattccgtcactaaattttgcgaccaaggaatttgtcaagggttttatattt 32726770  T
Q  369 tccgtcactaatttccctcgctaattttgctttt 402  Q
    ||| ||||||||||| ||| ||||||||||||||    
T  32726769 tccatcactaatttcgctccctaattttgctttt 32726736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 287 - 409
Target Start/End: Original strand, 35778155 - 35778277
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    ||||||||||||||| |||||||||| | | |||| || | | ||||||||||||||| ||||||||||  |||| ||||||||| ||||||||||||||    
T  35778155 ttagtgagggaaaacatgaaatccctatctcattctgtgattaaattttgcgaccaatgaatttgtgagagattttattttttccatcactaatttccct 35778254  T
Q  387 cgctaattttgctttttctagta 409  Q
    | | |||||| ||||||||||||    
T  35778255 cccaaattttactttttctagta 35778277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 253 - 402
Target Start/End: Complemental strand, 3080855 - 3080706
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  |||||||||||| | ||||||||||||||||||| ||||||||||||  |||| | ||||| | ||||| ||| ||  |||||||    
T  3080855 cactactaaaaaaacaaaaattagtgaagaaaatttagtgagggaaaacatgaaatccctctcaaatttcatcactaagttttgtgactaaagaatttgt 3080756  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttt 402  Q
    |||  |||| ||||||||| |||| |||||||||  ||||||||||||||    
T  3080755 gagagattttattttttccatcacgaatttccctacctaattttgctttt 3080706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 253 - 382
Target Start/End: Original strand, 18413536 - 18413665
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  ||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||  | |||||| |||| || ||| ||||    
T  18413536 cactactaaaaaagcaaaaattagtgagggaaatttagagagggaaaacgtgaattccctttttaattccgtcgttaaattttacgactaagaaacttgt 18413635  T
Q  353 gaggaatttcattttttccgtcactaattt 382  Q
    |||  |||| |||||||  |||||||||||    
T  18413636 gagtgattttattttttaagtcactaattt 18413665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 287 - 412
Target Start/End: Complemental strand, 36597465 - 36597340
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    ||||||||||||||| | |||| ||||| |||||| |||||| |||||| |||||||  |||||||||||||||| || ||||||||||  |||||  ||    
T  36597465 ttagtgagggaaaacataaaattcctctctaattctgtcactaaattttacgaccaaggaatttgtgaggaattttatgttttccgtcataaatttttct 36597366  T
Q  387 cgctaattttgctttttctagtagtg 412  Q
    | | ||||||||||||||||||||||    
T  36597365 cccaaattttgctttttctagtagtg 36597340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 268 - 411
Target Start/End: Complemental strand, 16472325 - 16472182
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaa-ttttgcgaccaataaatttgtgaggaatttcattt 366  Q
    |||||||||||| |||||||||| |||| |||| ||| |||| |||| |||||| |||||| || ||||||||||||  ||||| ||| | |||| ||||    
T  16472325 aaaaattagtgacggaaatttagagaggaaaaaagtggaatcgctctctaattctgtcactaaacttttgcgaccaacgaatttttgaaggattttattt 16472226  T
Q  367 tttccgtcactaatttccctcgctaattttgctttttctagtagt 411  Q
    ||| || ||||||||| |||| | |||||||||||||||||||||    
T  16472225 ttttcgacactaattt-cctcccaaattttgctttttctagtagt 16472182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 285 - 413
Target Start/End: Complemental strand, 23974703 - 23974575
Alignment:
Q  285 atttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttcc 384  Q
    ||||||||||||||| | |  ||||||||| ||||| ||||| | |||||| |||| ||  ||||||||||  |||| |||||||||||||||||||| |    
T  23974703 atttagtgagggaaagcattcaatccctctctaatttcgtcattaaattttacgacaaaggaatttgtgagagattttattttttccgtcactaattttc 23974604  T
Q  385 ctcgctaattttgctttttctagtagtgt 413  Q
    ||  |||||||| ||||| ||||||||||    
T  23974603 cttcctaatttttcttttcctagtagtgt 23974575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 279 - 382
Target Start/End: Complemental strand, 5043644 - 5043541
Alignment:
Q  279 agggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcacta 378  Q
    |||||||||||| |||| |||||| ||||| || || |||||||| |||| ||||||  ||| |  ||||||||||| |||||||||||||| |||||||    
T  5043644 agggaaatttagagaggaaaaacgcgaaattcccctctaattccgccactaaattttatgacgataaaatttgtgagaaatttcattttttctgtcacta 5043545  T
Q  379 attt 382  Q
    ||||    
T  5043544 attt 5043541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 253 - 328
Target Start/End: Complemental strand, 29728005 - 29727930
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcact 328  Q
    ||||||||| |||  |||||||||||||| |||||| | ||||||||||||||||| ||||| |||||||||||||    
T  29728005 cactactaaaaaaacaaaaattagtgaggcaaattttgcgagggaaaacgtgaaattcctctctaattccgtcact 29727930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 250 - 335
Target Start/End: Complemental strand, 22649491 - 22649406
Alignment:
Q  250 aatcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaatttt 335  Q
    ||||| |||||| |||  |||||||| |||| ||||||||| ||||||||||||||||||| ||| ||||||||||| | ||||||    
T  22649491 aatcattactaaaaaaataaaaattaatgagagaaatttagagagggaaaacgtgaaatccttctctaattccgtcattaaatttt 22649406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 368 - 412
Target Start/End: Complemental strand, 29727939 - 29727895
Alignment:
Q  368 ttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||||||||||||||||||||||||||| |||||||||||||||    
T  29727939 ttccgtcactaatttccctcgctaattttactttttctagtagtg 29727895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 373 - 414
Target Start/End: Complemental strand, 19891025 - 19890984
Alignment:
Q  373 tcactaatttccctcgctaattttgctttttctagtagtgta 414  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  19891025 tcactaatttccctcgctaattttgctttttctaatagtgta 19890984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 292 - 369
Target Start/End: Complemental strand, 31853208 - 31853131
Alignment:
Q  292 gagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttttt 369  Q
    |||| ||||| ||||||| |||| ||||||||||||| |||||||||||||  |||||| ||||| |||| |||||||    
T  31853208 gaggaaaaacatgaaatctctctctaattccgtcactaaattttgcgaccataaaatttatgagggattttatttttt 31853131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 16464723 - 16464768
Alignment:
Q  367 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||||||||||||||||||| |||||||||| ||| |||||||||    
T  16464723 tttccgtcactaatttccctccctaattttgcctttcctagtagtg 16464768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 287 - 382
Target Start/End: Original strand, 9024227 - 9024323
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaa-ttccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaattt 382  Q
    ||||||||||| ||| ||||||| |||| ||| ||  || ||| ||||||||||||||  |||||  |||| |||| ||||||||||||||||||||    
T  9024227 ttagtgagggataacatgaaatctctctctaaattatgttactaaattttgcgaccaaggaatttacgagggattttattttttccgtcactaattt 9024323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 251 - 309
Target Start/End: Complemental strand, 19891086 - 19891028
Alignment:
Q  251 atcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatc 309  Q
    ||||||||||| |||  ||||||| |||||||||| |||||||||||||| || |||||    
T  19891086 atcactactaaaaaaacaaaaattggtgagggaaagttagtgagggaaaatgtaaaatc 19891028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 268 - 324
Target Start/End: Complemental strand, 31158697 - 31158641
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgt 324  Q
    |||||| |||||||||||||||| || | |||||||||||| ||||  |||||||||    
T  31158697 aaaaataagtgagggaaatttagagaagaaaaacgtgaaattcctccctaattccgt 31158641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 122; Significance: 2e-62; HSPs: 67)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 253 - 414
Target Start/End: Original strand, 19240845 - 19241006
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  ||||||||||||||||||||| |||||||||||||| |||| ||||| ||||||||||||| ||||||||||||||  |||||||    
T  19240845 cactactaaaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgt 19240944  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgta 414  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19240945 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgta 19241006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 253 - 414
Target Start/End: Original strand, 19314029 - 19314190
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  ||||||||||||||||||||| |||||||||||||| |||| ||||| ||||||||||||| ||||||||||||||  |||||||    
T  19314029 cactactaaaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgt 19314128  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgta 414  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19314129 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgta 19314190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 253 - 413
Target Start/End: Original strand, 3823111 - 3823271
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||  |||||||    
T  3823111 cactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgt 3823210  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  3823211 gagaaatttcattttttccgtcactaatttccctcgctaattttgctttttctaatagtgt 3823271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 252 - 412
Target Start/End: Original strand, 17810275 - 17810435
Alignment:
Q  252 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttg 351  Q
    |||||||||| |||  |||||||||||||||| ||||||||||||||||| |||||||||||| ||||| ||||||| |||||||||||||| |||||||    
T  17810275 tcactactaaaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaatttcgtcactaaattttgcgaccaagaaatttg 17810374  T
Q  352 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  17810375 tgaggaatttcattttttccgtcactaattttcctcgctaattttgctttttctagtagtg 17810435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 253 - 412
Target Start/End: Original strand, 4330956 - 4331115
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  ||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||| |||||||||||||   |||||||    
T  4330956 cactactaaaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaattcctctctaattccgtcactaaattttgcgaccatggaatttgt 4331055  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4331056 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 4331115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 251 - 415
Target Start/End: Original strand, 21350454 - 21350618
Alignment:
Q  251 atcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaattt 350  Q
    ||||||||||| |||  |||||||||||||||||||||||||||| ||||||| |||||| ||| ||||||||||||| ||||||||||||||  |||||    
T  21350454 atcactactaaaaaaacaaaaattagtgagggaaatttagtgaggaaaaacgtaaaatccatctctaattccgtcactaaattttgcgaccaaggaattt 21350553  T
Q  351 gtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgtat 415  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  21350554 gtgaggaatttcattttttccgtcactaatttcccttgcttattttgctttttctagtagtgtat 21350618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 253 - 412
Target Start/End: Complemental strand, 24193355 - 24193196
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  ||||||||||||| ||||||| |||||||||||| ||||||| |||| ||||||||||||| |||||||||||||  ||||||||    
T  24193355 cactactaaaaaaacaaaaattagtgagagaaattttgtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccatgaaatttgt 24193256  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24193255 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 24193196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 253 - 414
Target Start/End: Original strand, 27869216 - 27869377
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  ||||||||||||| || ||||||||||||||||| ||||||| |||| ||||||||||||| ||||||||||||||  |||||||    
T  27869216 cactactaaaaaaacaaaaattagtgagagatatttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaaagaatttgt 27869315  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgta 414  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  27869316 gaggaatttcattttttccatcactaatttccctcgctaattttgctttttctagtagtgta 27869377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 253 - 413
Target Start/End: Complemental strand, 4647914 - 4647754
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  ||||||||||||| ||||||| ||||||||||| ||||||||||||| ||||||||||||| ||||||||||| |  ||||||||    
T  4647914 cactactaaaaaaacaaaaattagtgagagaaattttgtgagggaaaatgtgaaatccctctctaattccgtcactaaattttgcgactatgaaatttgt 4647815  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  4647814 gaggaatttcattttttccgtcactaatttccctcgctaattttgttttttctagtagtgt 4647754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 268 - 412
Target Start/End: Complemental strand, 24576168 - 24576024
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    |||||||||||||||| |||||| |||||||||| ||||||| |||| ||||||||||||| ||||||||||||||  ||||||||||||||||||||||    
T  24576168 aaaaattagtgagggatatttagcgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcatttt 24576069  T
Q  368 ttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  24576068 ttccgtcactaatttccctcgctaattttgctttttctagtagtg 24576024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 252 - 412
Target Start/End: Complemental strand, 27910924 - 27910764
Alignment:
Q  252 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttg 351  Q
    |||||||||| |||  |||||||||||||||| ||||| ||||||||||| |||||||||||| ||||||||||||| ||||||| ||| ||  ||||||    
T  27910924 tcactactaaaaaaacaaaaattagtgagggatatttactgagggaaaacatgaaatccctctctaattccgtcactaaattttgtgactaaggaatttg 27910825  T
Q  352 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27910824 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 27910764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 252 - 412
Target Start/End: Complemental strand, 27957343 - 27957183
Alignment:
Q  252 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttg 351  Q
    |||||||||| |||  |||||||||||||||| ||||| ||||||||||| |||||||||||| ||||||||||||| ||||||| ||| ||  ||||||    
T  27957343 tcactactaaaaaaacaaaaattagtgagggatatttactgagggaaaacatgaaatccctctctaattccgtcactaaattttgtgactaaggaatttg 27957244  T
Q  352 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27957243 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 27957183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 253 - 413
Target Start/End: Original strand, 33652545 - 33652705
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  |||||||||||||||| ||||||||||||||||| |||||||| ||| ||| ||||||||| ||||||||||||||  |||||||    
T  33652545 cactactaaaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccttctctaactccgtcactaaattttgcgaccaaggaatttgt 33652644  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  33652645 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctggtagtgt 33652705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 273 - 412
Target Start/End: Complemental strand, 8555443 - 8555304
Alignment:
Q  273 ttagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccg 372  Q
    ||||||||||||||||||||||||||||| | ||||| |||| ||||||||||||| ||||||||||||||  |||||||||||||||||||||||||||    
T  8555443 ttagtgagggaaatttagtgagggaaaacataaaatctctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccg 8555344  T
Q  373 tcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  8555343 tcactaatttccctcgctaattttgctttttctagtagtg 8555304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 257 - 412
Target Start/End: Complemental strand, 17824771 - 17824616
Alignment:
Q  257 actaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgagg 356  Q
    |||| |||| ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||  |||||||||||    
T  17824771 actactaaaaaaaaaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 17824672  T
Q  357 aatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||| || ||||||||||| |||||||||| ||||||||||||||||||||||||    
T  17824671 aattttatgttttccgtcacaaatttccctctctaattttgctttttctagtagtg 17824616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 251 - 416
Target Start/End: Complemental strand, 17104026 - 17103861
Alignment:
Q  251 atcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaattt 350  Q
    ||||||||||| |||  |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||  |||||    
T  17104026 atcactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaattt 17103927  T
Q  351 gtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgtatc 416  Q
    ||||||||||| || ||||||||||| |||||| ||| ||||||||| ||||||||||||||||||    
T  17103926 gtgaggaattttatgttttccgtcacaaatttctctctctaattttgttttttctagtagtgtatc 17103861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 283 - 415
Target Start/End: Original strand, 19256220 - 19256352
Alignment:
Q  283 aaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaattt 382  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  19256220 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaattttattttttccgtcactaattt 19256319  T
Q  383 ccctcgctaattttgctttttctagtagtgtat 415  Q
    |||||| ||||||||||||||||||||||||||    
T  19256320 ccctcgttaattttgctttttctagtagtgtat 19256352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 253 - 412
Target Start/End: Original strand, 29350901 - 29351061
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  |||||||||||||||| ||||||||||||||||| |||||||||||| ||||| ||||||| |||||||||||||  ||||||||    
T  29350901 cactactaaaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattgcgtcactaaattttgcgaccatgaaatttgt 29351000  T
Q  353 gaggaatttcattttttc-cgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  29351001 gaggaatttcattttttctagtcactaatttccctcgctaattttgctttttctagtagtg 29351061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 253 - 413
Target Start/End: Original strand, 32961637 - 32961797
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  ||||||||||||||||||||||||||||||||| || |||| ||||| ||||||||||||| || ||||||||||| ||||||||    
T  32961637 cactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaatgtaaaattcctctctaattccgtcactaaactttgcgaccaagaaatttgt 32961736  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||    
T  32961737 gaggaatttcattttttctgtcactgatttccctcgctaattttgctttttttagtagtgt 32961797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 253 - 412
Target Start/End: Original strand, 6817032 - 6817191
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  ||||||||||||||||||||||||||||||||| || ||||| |||| ||||||||||||| ||||||| |||||| ||||||||    
T  6817032 cactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaatgtaaaatctctctctaattccgtcactaaattttgtgaccaagaaatttgt 6817131  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||    
T  6817132 gaggaatttcattttttccgtcactgattttccttgctaattttgctttttctagtagtg 6817191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 268 - 414
Target Start/End: Complemental strand, 18010204 - 18010058
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    |||||||||||||||| ||||| ||||||||||| |||||||||||| ||||||||||||| |||||||||| |||  ||||||||||||||||||||||    
T  18010204 aaaaattagtgagggatatttattgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgatcaaggaatttgtgaggaatttcatttt 18010105  T
Q  368 ttccgtcactaatttccctcgctaattttgctttttctagtagtgta 414  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||    
T  18010104 ttccgtcactaatttctctcgctaattttgctttttctggtagtgta 18010058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 270 - 412
Target Start/End: Complemental strand, 43431701 - 43431559
Alignment:
Q  270 aaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttttt 369  Q
    |||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||| |||||||| |||||  ||||||||||||||||||||||||    
T  43431701 aaattagtgagggaaatttagtgagggaaaacgtaaaatccctctctaatttcgtcactaaattttgcaaccaaggaatttgtgaggaatttcatttttt 43431602  T
Q  370 ccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    |||||||||||||||||| |||||||| |||||||||||||||    
T  43431601 ccgtcactaatttccctcactaatttttctttttctagtagtg 43431559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 253 - 412
Target Start/End: Complemental strand, 16062098 - 16061939
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  |||||||||||||||||||||  ||||| ||||||||||||| |||| |||||||||||||  ||||||||||||   |||||||    
T  16062098 cactactaaaaaaataaaaattagtgagggaaattttttgaggaaaaacgtgaaatcactctctaattccgtcactacattttgcgaccatagaatttgt 16061999  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  16061998 gaggaatttcattttttccgtcactaatttccctcgctaattttactttttctagtagtg 16061939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 253 - 412
Target Start/End: Original strand, 22939291 - 22939450
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  ||||||||||||| || ||||||||||||||||| ||||||| |||| ||||||||||||| ||||||||||| ||  |||||||    
T  22939291 cactactaaaaaaacaaaaattagtgagagatatttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgacaaaggaatttgt 22939390  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  22939391 gaggaatttcattttttccgtcactaatttccttcactaattttgctttttctagtagtg 22939450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 283 - 412
Target Start/End: Original strand, 11938753 - 11938881
Alignment:
Q  283 aaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaattt 382  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||  |||||||||||||||||| ||||||||||||||||||    
T  11938753 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttca-tttttccgtcactaattt 11938851  T
Q  383 ccctcgctaattttgctttttctagtagtg 412  Q
    ||||||||||||||||||||||||||||||    
T  11938852 ccctcgctaattttgctttttctagtagtg 11938881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 287 - 412
Target Start/End: Original strand, 32247921 - 32248046
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||   |||||||||||||||||||||||||||||||||||||||||    
T  32247921 ttagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatagaatttgtgaggaatttcattttttccgtcactaatttccct 32248020  T
Q  387 cgctaattttgctttttctagtagtg 412  Q
    || |||||||||||||||||||||||    
T  32248021 cgttaattttgctttttctagtagtg 32248046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 253 - 414
Target Start/End: Complemental strand, 40289579 - 40289419
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  |||||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||| ||||||||||||||  |||||||    
T  40289579 cactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacgtaaaatccctcct-aattccgtcactaaattttgcgaccaaggaatttgt 40289481  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgta 414  Q
    ||| || ||||||||||||||||||||||| |||||||||||||  ||||||||||||||||    
T  40289480 gagaaaattcattttttccgtcactaattttcctcgctaattttaatttttctagtagtgta 40289419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 283 - 413
Target Start/End: Original strand, 24636660 - 24636791
Alignment:
Q  283 aaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaattt 382  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  24636660 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgatcaagaaatttgtgaggaatttcattttttccgtcactaattt 24636759  T
Q  383 ccctcgctaattttgct-ttttctagtagtgt 413  Q
    |||||| |||||||||| ||||||||||||||    
T  24636760 ccctcgttaattttgctattttctagtagtgt 24636791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 268 - 410
Target Start/End: Complemental strand, 9915184 - 9915043
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| |||| | |||||| ||||||||||| |   ||||||||||||||||||||||    
T  9915184 aaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaatcctgtcactaaattttgcgac-atggaatttgtgaggaatttcatttt 9915086  T
Q  368 ttccgtcactaatttccctcgctaattttgctttttctagtag 410  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  9915085 ttccgtcactaatttctctcgctaattttgctttttctagtag 9915043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 287 - 413
Target Start/End: Complemental strand, 19488186 - 19488060
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    ||||||||||||||  |||||| ||||| ||||||||||||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  19488186 ttagtgagggaaaatatgaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 19488087  T
Q  387 cgctaattttgctttttctagtagtgt 413  Q
    |||||||||||||||||||||||||||    
T  19488086 cgctaattttgctttttctagtagtgt 19488060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 283 - 413
Target Start/End: Complemental strand, 30467083 - 30466953
Alignment:
Q  283 aaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaattt 382  Q
    ||||||||||||||||||||| ||||| |||| ||||||| ||||| |||||||||||||| |||||| |||||||||| | ||||||||||||||||||    
T  30467083 aaatttagtgagggaaaacgtaaaatctctctctaattccatcactaaattttgcgaccaagaaatttatgaggaattttaatttttccgtcactaattt 30466984  T
Q  383 ccctcgctaattttgctttttctagtagtgt 413  Q
    |||||||||||||||||||||||||||||||    
T  30466983 ccctcgctaattttgctttttctagtagtgt 30466953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 283 - 413
Target Start/End: Original strand, 30687944 - 30688074
Alignment:
Q  283 aaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaattt 382  Q
    ||||||||||| |||||| || |||||||||| ||||||||||||| ||||||||||||||  ||||||||||||||||||||||||| |||||| ||||    
T  30687944 aaatttagtgaaggaaaatgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttcggtcactgattt 30688043  T
Q  383 ccctcgctaattttgctttttctagtagtgt 413  Q
    |||||||||||||||||||||||||||||||    
T  30688044 ccctcgctaattttgctttttctagtagtgt 30688074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 251 - 412
Target Start/End: Complemental strand, 6816544 - 6816383
Alignment:
Q  251 atcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaattt 350  Q
    ||||||||||| |||  |||||||||||||||| ||||||||||||||||| |||||||||||| |||||||| |||| |||||||| |||||  |||||    
T  6816544 atcactactaaaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgccactaaattttgcaaccaaggaattt 6816445  T
Q  351 gtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||| ||||| ||||||| | |||||||||||||||||||||| ||||||| |||||||||    
T  6816444 gtgagaaattttatttttttcatcactaatttccctcgctaattatgcttttcctagtagtg 6816383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 252 - 412
Target Start/End: Original strand, 29345048 - 29345208
Alignment:
Q  252 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttg 351  Q
    |||||||||  ||| |||||||| ||||||||||||||| ||||||||||||||||||||||  ||||||||||||| |||||||| || || |||||||    
T  29345048 tcactactagaaaagaaaaaatttgtgagggaaatttagagagggaaaacgtgaaatccctccctaattccgtcactaaattttgccactaagaaatttg 29345147  T
Q  352 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    |||   |||| ||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  29345148 tgaaagattttattttttccgtcactaatttccctccctaatttttctttttctagtagtg 29345208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 287 - 413
Target Start/End: Complemental strand, 13061056 - 13060930
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    ||||||||||||||| |||||||||||| |||||| |||||| ||||||||||| ||  ||||||||||||||||||||||||||||||||||||| |||    
T  13061056 ttagtgagggaaaacatgaaatccctctctaattctgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaatttacct 13060957  T
Q  387 cgctaattttgctttttctagtagtgt 413  Q
    |||||||||||||||| ||||||||||    
T  13060956 cgctaattttgcttttgctagtagtgt 13060930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 290 - 412
Target Start/End: Complemental strand, 25655980 - 25655858
Alignment:
Q  290 gtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccctcgc 389  Q
    ||||||||||||||||||||||||| ||||||  ||||| |||||||||||||   |||||||||||||||||||||||||||||||||||||||||| |    
T  25655980 gtgagggaaaacgtgaaatccctctctaattctatcactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtcactaatttccctcac 25655881  T
Q  390 taattttgctttttctagtagtg 412  Q
    |||||||||||||||||||||||    
T  25655880 taattttgctttttctagtagtg 25655858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 283 - 412
Target Start/End: Complemental strand, 5670298 - 5670169
Alignment:
Q  283 aaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaattt 382  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||  ||||||||||||||| |||||||||||||||||||||    
T  5670298 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattccattttttccgtcactaattt 5670199  T
Q  383 ccctcgctaattttgctttttctagtagtg 412  Q
    |||||| | |||||| ||||||||| ||||    
T  5670198 ccctcgttgattttgttttttctagcagtg 5670169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 287 - 415
Target Start/End: Complemental strand, 23752411 - 23752283
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    |||||||||||||| || ||||| |||| ||||||||||||| ||||||||||||||  |||||||||| |||||||||||||||||||||||| |||||    
T  23752411 ttagtgagggaaaatgtaaaatcactctctaattccgtcactaaattttgcgaccaaggaatttgtgagaaatttcattttttccgtcactaatatccct 23752312  T
Q  387 cgctaattttgctttttctagtagtgtat 415  Q
    |||||||||||||||||||| ||||||||    
T  23752311 cgctaattttgctttttctaatagtgtat 23752283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 254 - 412
Target Start/End: Complemental strand, 21219396 - 21219240
Alignment:
Q  254 actactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtg 353  Q
    |||||||  |||| ||||||||||||||||||||||  |||| || ||||||||||||||| ||||||| ||||| |||||||||||||| |||||| ||    
T  21219396 actactagaaaatcaaaaattagtgagggaaatttac-gagg-aatacgtgaaatccctctctaattccatcactaaattttgcgaccaaaaaatttatg 21219299  T
Q  354 aggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    || ||||||||||||||||||||||||||| |||||| ||||| |||||||||||||||    
T  21219298 agtaatttcattttttccgtcactaatttctctcgctgatttttctttttctagtagtg 21219240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 253 - 414
Target Start/End: Original strand, 15251581 - 15251740
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||| |||||||||||||| |||||||  ||||||||||||||||||| ||| |||||| |||||| |||||||||||||| ||||  ||    
T  15251581 cactactaaaaaatcaaaaattagtgagg-aaatttaaagagggaaaacgtgaaatccttctctaattctgtcactaaattttgcgaccaaaaaatc-gt 15251678  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgta 414  Q
    |||  |||| ||||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  15251679 gagagattttattttttccgtcactaatttccctccctaattttgctttttcaagtagtgta 15251740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 283 - 412
Target Start/End: Complemental strand, 25000560 - 25000431
Alignment:
Q  283 aaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaattt 382  Q
    ||||||||||||||||||||| | |||||||| ||||||||||||  |||| |||||| ||  |||||||||||||||||||||||||||||||||||||    
T  25000560 aaatttagtgagggaaaacgtaacatccctctctaattccgtcacaaaattctgcgactaaggaatttgtgaggaatttcattttttccgtcactaattt 25000461  T
Q  383 ccctcgctaattttgctttttctagtagtg 412  Q
    ||||| |||||||| |||||||||||||||    
T  25000460 ccctcactaattttactttttctagtagtg 25000431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 287 - 412
Target Start/End: Complemental strand, 25273452 - 25273328
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    ||||||||||||||||| |||||||||| |||||| |||||| ||||||||||||||  |||||||||||| ||||||||||| ||||||||||||||||    
T  25273452 ttagtgagggaaaacgtaaaatccctctctaattctgtcactaaattttgcgaccaaagaatttgtgaggactttcatttttt-cgtcactaatttccct 25273354  T
Q  387 cgctaattttgctttttctagtagtg 412  Q
    || |||||||||||||||||||||||    
T  25273353 cgttaattttgctttttctagtagtg 25273328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 287 - 412
Target Start/End: Complemental strand, 31399633 - 31399508
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    |||||||||||||||||||||||| ||| ||||||||||||| |||||||||||||   |||||||||||||||||||||||| | ||||||||||||||    
T  31399633 ttagtgagggaaaacgtgaaatccatctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcatttttttcatcactaatttccct 31399534  T
Q  387 cgctaattttgctttttctagtagtg 412  Q
    || |||||||| ||||||||||||||    
T  31399533 cgttaattttgttttttctagtagtg 31399508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 287 - 412
Target Start/End: Original strand, 8824837 - 8824962
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    ||||||||| |||| || |||||||||| ||||||||||||| ||||||||||| ||  ||| |||||||||||| ||||||||| ||||||||||||||    
T  8824837 ttagtgaggaaaaatgtaaaatccctctctaattccgtcactaaattttgcgactaaggaatctgtgaggaatttgattttttccatcactaatttccct 8824936  T
Q  387 cgctaattttgctttttctagtagtg 412  Q
    ||||||||||||||||||||||||||    
T  8824937 cgctaattttgctttttctagtagtg 8824962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 253 - 414
Target Start/End: Complemental strand, 18844703 - 18844542
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  |||||||||||||||||||||||||| ||||||| |||||||||||| |||||  || | | |||||||||||||| ||||||||    
T  18844703 cactactaaaaaaataaaaattagtgagggaaatttagtgaaggaaaacatgaaatccctctctaattttgttattaaattttgcgaccaaaaaatttgt 18844604  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgta 414  Q
    ||||||||| || |||||| |||| |||| || || |||||||||||||| |||||||||||    
T  18844603 gaggaattttatgttttccatcacaaattaccatccctaattttgcttttcctagtagtgta 18844542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 253 - 410
Target Start/End: Original strand, 37992077 - 37992234
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  |||||||||||||| ||||||||||||||||||| ||||||| |||| ||||||||||||| ||||||||||| ||  ||| |||    
T  37992077 cactactaaaaaaacaaaaattagtgaggaaaatttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaagaatatgt 37992176  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtag 410  Q
    || | |||| || ||||||||||||||||| |||| |||||||||||||| |||||||    
T  37992177 gaaggattttatgttttccgtcactaattttcctccctaattttgcttttcctagtag 37992234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 251 - 413
Target Start/End: Original strand, 9631380 - 9631542
Alignment:
Q  251 atcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattcc-gtcactgaattttgcgaccaataaatt 349  Q
    ||||||||||| ||| ||||| |||| ||||||||||| |||| ||||||||||||||  |||| ||||||| |||||| ||||||||||  |   ||||    
T  9631380 atcactactaaaaaacaaaaa-ttagcgagggaaattttgtgaaggaaaacgtgaaatttctctctaattcccgtcactaaattttgcgagtatagaatt 9631478  T
Q  350 tgtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    |||||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  9631479 tgtgaggaattttattttttccgtcactaattttccttgctaattttgctttttctagtagtgt 9631542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 253 - 373
Target Start/End: Original strand, 5879182 - 5879302
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  |||||||||||||||||||||||||||| ||||||| |||| ||||| ||||||||||||| |||||| ||||||| ||||||||    
T  5879182 cactactaaaaaaacaaaaattagtgagggaaatttagtgaggaaaaacgtaaaatgcctctctaattccgtcactaaattttacgaccaagaaatttgt 5879281  T
Q  353 gaggaatttcattttttccgt 373  Q
    ||||||||| |||||||||||    
T  5879282 gaggaattttattttttccgt 5879302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 287 - 415
Target Start/End: Original strand, 10917839 - 10917967
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    ||||||||| ||||| || ||||||||| ||||||||||||| |||||||| | ||| |||||| |||||||||| || ||||||||||| |||||||||    
T  10917839 ttagtgaggaaaaacatgcaatccctctctaattccgtcactaaattttgcaatcaagaaatttatgaggaattttatgttttccgtcacaaatttccct 10917938  T
Q  387 cgctaattttgctttttctagtagtgtat 415  Q
    | |||||||||||||||||||||||||||    
T  10917939 ccctaattttgctttttctagtagtgtat 10917967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 287 - 414
Target Start/End: Complemental strand, 33413095 - 33412975
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    ||||||||||||||||| |||||||||| ||||||||||||| |||||||||       |||||||||||||||||||||||||||| ||||||||||||    
T  33413095 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgg------aatttgtgaggaatttcattttttccgttactaatttccct 33413002  T
Q  387 cgctaattttgctttttctagtagtgta 414  Q
    |||||||||| |||||||||||||||||    
T  33413001 cgctaatttt-ctttttctagtagtgta 33412975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 287 - 412
Target Start/End: Complemental strand, 26399132 - 26399007
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||  ||||||||||  |||| ||||||||||||||||||||||||    
T  26399132 ttagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaacgaatttgtgagagattttattttttccgtcactaatttccct 26399033  T
Q  387 cgctaattttgctttttctagtagtg 412  Q
    | ||| |||   ||||| ||||||||    
T  26399032 ccctattttacttttttttagtagtg 26399007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 332 - 412
Target Start/End: Original strand, 25274654 - 25274734
Alignment:
Q  332 ttttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||||||||||  |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25274654 ttttgcgaccaaggaatttgtgagaaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 25274734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 272 - 412
Target Start/End: Complemental strand, 31344312 - 31344172
Alignment:
Q  272 attagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttcc 371  Q
    ||||||||||||| ||||| ||||||||| ||||||| ||||| ||||||||||| | |||||||||| ||| |||||| |||| ||||| |||||||||    
T  31344312 attagtgagggaattttagagagggaaaatgtgaaattcctctctaattccgtcattaaattttgcgatcaagaaatttatgagaaatttgattttttcc 31344213  T
Q  372 gtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
     |||||||||||| || |||||||| |||||  ||||||||    
T  31344212 atcactaatttccttctctaattttacttttcttagtagtg 31344172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 287 - 405
Target Start/End: Original strand, 14304241 - 14304359
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    |||||||||||||||| |||||||||||||| ||| | |||| ||||||  ||| |  ||||||| |||| |||||||||||||| ||||||||||||||    
T  14304241 ttagtgagggaaaacgcgaaatccctctttatttctggcactaaattttatgacgaggaaatttgcgagggatttcattttttccatcactaatttccct 14304340  T
Q  387 cgctaattttgctttttct 405  Q
    |||||||||||||||||||    
T  14304341 cgctaattttgctttttct 14304359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 287 - 379
Target Start/End: Complemental strand, 19493781 - 19493688
Alignment:
Q  287 ttagtgagggaaaacgtgaaa-tccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaa 379  Q
    ||||||||||||||| | ||| ||||||| ||||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  19493781 ttagtgagggaaaacataaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaa 19493688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 308 - 412
Target Start/End: Original strand, 8789873 - 8789977
Alignment:
Q  308 tccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctag 407  Q
    ||||||| ||||||||||||| ||||||||||||||  |||||||||||||||| || ||||| ||||| ||||| |||| |||||||||||||| ||||    
T  8789873 tccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttcagtcacaaattttcctccctaattttgcttttcctag 8789972  T
Q  408 tagtg 412  Q
    |||||    
T  8789973 tagtg 8789977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 330 - 413
Target Start/End: Complemental strand, 42700739 - 42700656
Alignment:
Q  330 aattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    ||||||||||| ||  |||||||||||||||||||||||||||||||| |||| ||||||||||||| ||||||||||||||||    
T  42700739 aattttgcgactaaggaatttgtgaggaatttcattttttccgtcactgattttcctcgctaattttactttttctagtagtgt 42700656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 272 - 413
Target Start/End: Complemental strand, 6084384 - 6084245
Alignment:
Q  272 attagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttcc 371  Q
    ||||| |||| |||||||| ||  ||||| || ||||| |||| ||||||||||||| ||||||  ||||||  |||||| |||  |||| |||||||||    
T  6084384 attagcgaggtaaatttagagactgaaaatgtcaaatctctctctaattccgtcactaaatttttagaccaaggaatttgggag--attttattttttcc 6084287  T
Q  372 gtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    |||||||||||  ||| |||||||||||||||||| ||||||    
T  6084286 gtcactaatttatctccctaattttgctttttctattagtgt 6084245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 254 - 414
Target Start/End: Original strand, 17003241 - 17003401
Alignment:
Q  254 actactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtg 353  Q
    |||||||| |||  |||| | ||||||  |||||||| |||||||||||| ||||  |||| |||| | |||| | ||||||| || |||  ||||| ||    
T  17003241 actactaaaaaaataaaactcagtgagaaaaatttagagagggaaaacgtaaaattgctctctaatacagtcattaaattttgtgatcaaggaatttatg 17003340  T
Q  354 aggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgta 414  Q
    |||  ||| |||||||||  ||||||||| |||| ||||||||||||||||||||||||||    
T  17003341 aggggttttattttttcccacactaattttcctccctaattttgctttttctagtagtgta 17003401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 268 - 406
Target Start/End: Complemental strand, 3692315 - 3692176
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttca-ttt 366  Q
    ||||||||||||||||||||||  |||| ||||||| |||||| ||| ||||||| | ||| ||||||  ||| ||  |||||||||||||||| | |||    
T  3692315 aaaaattagtgagggaaatttatagaggtaaaacgtaaaatccttctctaattccattactaaattttatgactaaagaatttgtgaggaattttatttt 3692216  T
Q  367 tttccgtcactaatttccctcgctaattttgctttttcta 406  Q
    ||||  ||||| ||||| ||| || |||||| ||||||||    
T  3692215 tttctatcacttatttctctccctgattttgttttttcta 3692176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 252 - 328
Target Start/End: Original strand, 25651055 - 25651131
Alignment:
Q  252 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcact 328  Q
    |||||||||| |||  ||||||||||||||||| |||||||| ||||||||| || || |||| |||||||||||||    
T  25651055 tcactactaaaaaaataaaaattagtgagggaagtttagtgaaggaaaacgtaaagtctctctctaattccgtcact 25651131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 348 - 415
Target Start/End: Complemental strand, 24479877 - 24479810
Alignment:
Q  348 tttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgtat 415  Q
    ||||||||  |||| | |||||| |||||||||||||||| |||||| |||||||| |||||||||||    
T  24479877 tttgtgagagattttactttttctgtcactaatttccctctctaattatgctttttttagtagtgtat 24479810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 287 - 382
Target Start/End: Complemental strand, 41527825 - 41527730
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaattt 382  Q
    ||||||||||| ||| ||||||| |||  |||||  || ||| |||||||||| |||  ||||| ||||| |||| ||||||||||||||||||||    
T  41527825 ttagtgagggataacatgaaatctctccctaattatgttactaaattttgcgatcaaggaatttatgagggattttattttttccgtcactaattt 41527730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 314 - 408
Target Start/End: Complemental strand, 2265476 - 2265383
Alignment:
Q  314 tttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagt 408  Q
    |||||||| |||||| ||||||| || |||  ||||||||| | |||| |||||||||||||||||||| | || |||||||| ||||| |||||    
T  2265476 tttaattctgtcactaaattttgtgatcaaagaatttgtgaaggattttattttttccgtcactaattt-cgtccctaattttacttttcctagt 2265383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 252 - 336
Target Start/End: Complemental strand, 24479958 - 24479874
Alignment:
Q  252 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttg 336  Q
    |||||||||| |||  |||||||||||||    |||||| || |||||||||||||| ||||| |||||| |||||| |||||||    
T  24479958 tcactactaaaaaagcaaaaattagtgagaattatttagagaaggaaaacgtgaaattcctctctaattctgtcactaaattttg 24479874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 270 - 382
Target Start/End: Complemental strand, 29473442 - 29473330
Alignment:
Q  270 aaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttttt 369  Q
    |||||| |||||||||| |||  |||||||||||||||||| ||| | ||||||| ||| ||||||| ||| |  ||||| | ||||  ||| |||||||    
T  29473442 aaattattgagggaaatatagaaagggaaaacgtgaaatccttctctgattccgttactaaattttgtgacgaggaaattagagaggggttttatttttt 29473343  T
Q  370 ccgtcactaattt 382  Q
    |||  ||||||||    
T  29473342 ccgctactaattt 29473330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 346 - 406
Target Start/End: Complemental strand, 35678125 - 35678065
Alignment:
Q  346 aatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttcta 406  Q
    ||||||||| | |||| ||||||||| ||| |||||| ||||  |||||||||||||||||    
T  35678125 aatttgtgatggattttattttttccttcattaattttcctccttaattttgctttttcta 35678065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 122; Significance: 2e-62; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 253 - 413
Target Start/End: Complemental strand, 55309372 - 55309211
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||  |||||||    
T  55309372 cactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgt 55309273  T
Q  353 gaggaatttcatt-ttttccgtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  55309272 gaggaatttcatttttttccgtcactaatttccctcgctaattttgctttttctagtagtgt 55309211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 253 - 415
Target Start/End: Complemental strand, 46286388 - 46286226
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||||  ||||||||    
T  46286388 cactactaaaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgt 46286289  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgtat 415  Q
    ||||||||| |||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  46286288 gaggaattttattttttccgtcactaatttccgtcactaattttgctttttctagtagtgtat 46286226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 273 - 414
Target Start/End: Complemental strand, 32175876 - 32175735
Alignment:
Q  273 ttagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccg 372  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||    
T  32175876 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaattttattttttccg 32175777  T
Q  373 tcactaatttccctcgctaattttgctttttctagtagtgta 414  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  32175776 tcactaatttccctcgttaattttgctttttctagtagtgta 32175735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 253 - 412
Target Start/End: Original strand, 19839157 - 19839316
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  ||||||||| |||| ||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||  |||||||    
T  19839157 cactactaaaaaaacaaaaattagcgaggaaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgt 19839256  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19839257 gagaaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 19839316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 253 - 412
Target Start/End: Complemental strand, 27040184 - 27040025
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  ||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||||  ||||||||    
T  27040184 cactactaaaaaaacaaatattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgt 27040085  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  27040084 gaggaattttcttttttccgtcactaatttccctcgctaattttgctttttctagtagtg 27040025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 251 - 415
Target Start/End: Complemental strand, 30269149 - 30268985
Alignment:
Q  251 atcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaattt 350  Q
    ||||||||||| |||  ||||||||||||||||||||||| ||||||||| || ||||| |||| ||||||||||||| ||||||||||||||  |||||    
T  30269149 atcactactaaaaaaacaaaaattagtgagggaaatttagcgagggaaaatgtaaaatctctctctaattccgtcactaaattttgcgaccaaataattt 30269050  T
Q  351 gtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgtat 415  Q
    | ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  30269049 gcgaggaatttcattttttccgtcactgatttccctcgctaattttgctttttctagtagtgtat 30268985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 251 - 415
Target Start/End: Original strand, 30283040 - 30283204
Alignment:
Q  251 atcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaattt 350  Q
    ||||||||||| |||  ||||||||||||||||||||||| ||||||||| || ||||| |||| ||||||||||||| ||||||||||||||  |||||    
T  30283040 atcactactaaaaaaacaaaaattagtgagggaaatttagcgagggaaaatgtaaaatctctctctaattccgtcactaaattttgcgaccaaataattt 30283139  T
Q  351 gtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgtat 415  Q
    | ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  30283140 gcgaggaatttcattttttccgtcactgatttccctcgctaattttgctttttctagtagtgtat 30283204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 273 - 412
Target Start/End: Original strand, 5473847 - 5473986
Alignment:
Q  273 ttagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccg 372  Q
    ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||  |||| |||||||||||||||||| |||    
T  5473847 ttagtgaggaaaatttagtgagggaaaacgtaaaatccctctttaattccgtcactaaattttgcgaccaaggaattggtgaggaatttcatttttcccg 5473946  T
Q  373 tcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  5473947 tcactaatttccctcgctaattttgctttttctagtagtg 5473986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 253 - 413
Target Start/End: Complemental strand, 19680583 - 19680423
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  |||||||| |||||||||||| |||||||||||||| |||||||||| ||||||||||||| |||||||||||||  ||||||||    
T  19680583 cactactaaaaaaacaaaaattaatgagggaaattttgtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgt 19680484  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    ||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||    
T  19680483 gaggaatttcattttttccgtcactaaattccctcactaatttttctttttctagtagtgt 19680423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 268 - 412
Target Start/End: Original strand, 22168261 - 22168405
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    |||||||||||||||| ||||||||||||||||| |||||| ||||| |||||||| |||| ||||||||||||||  ||||| ||||||||||||||||    
T  22168261 aaaaattagtgagggatatttagtgagggaaaacatgaaattcctctctaattccggcactaaattttgcgaccaaggaatttatgaggaatttcatttt 22168360  T
Q  368 ttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  22168361 ttccgtcactaatttccctcgctaattttgctttttctagtagtg 22168405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 273 - 413
Target Start/End: Complemental strand, 45532718 - 45532578
Alignment:
Q  273 ttagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccg 372  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||||||||| | |||||||||| ||| ||||||||||||||||||||||||||||    
T  45532718 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcattaaattttgcgatcaagaaatttgtgaggaatttcattttttccg 45532619  T
Q  373 tcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    |||||||||||||||| ||||||||||||||||| ||||||    
T  45532618 tcactaatttccctcgttaattttgctttttctaatagtgt 45532578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 268 - 413
Target Start/End: Complemental strand, 2275822 - 2275676
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||| |||||||||| |||  ||||||||||||||||||||||    
T  2275822 aaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgatcaaggaatttgtgaggaatttcatttt 2275723  T
Q  368 ttccgtcactaatttccctcgctaa-ttttgctttttctagtagtgt 413  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||    
T  2275722 ttccgtcactaatttccctcgctaatttttgttttttctagtagtgt 2275676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 268 - 414
Target Start/End: Original strand, 18051832 - 18051978
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| ||||||||||||   ||||||||||| |||||||||||    
T  18051832 aaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccgtgaaatttgtgagaaatttcatttt 18051931  T
Q  368 ttccgtcactaatttccctcgctaattttgctttttctagtagtgta 414  Q
    |||||||||||||||||||| ||||||||||||||||| | ||||||    
T  18051932 ttccgtcactaatttccctcactaattttgctttttctggcagtgta 18051978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 253 - 407
Target Start/End: Complemental strand, 37378782 - 37378628
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  ||||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||| |||||||||||||   |||||||    
T  37378782 cactactaaaaaaacaaaaattagtgagggaaattttgtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgt 37378683  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctag 407  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  37378682 gaggaatttcattttttccgtcaataattttcctcgctaattttgctttttctag 37378628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 252 - 413
Target Start/End: Complemental strand, 22128472 - 22128311
Alignment:
Q  252 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttg 351  Q
    |||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| ||||||||||||||  ||||||    
T  22128472 tcactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccaaggaatttg 22128373  T
Q  352 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    ||||  |||| ||||||||||||||||||||||||| || |||||| |||||||||||||||    
T  22128372 tgagagattttattttttccgtcactaatttccctccctgattttgttttttctagtagtgt 22128311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 283 - 415
Target Start/End: Complemental strand, 13028945 - 13028813
Alignment:
Q  283 aaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaattt 382  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  13028945 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaattgcattttttccgtcactaattt 13028846  T
Q  383 ccctcgctaattttgctttttctagtagtgtat 415  Q
     ||||||||| ||||||||||||||||||||||    
T  13028845 tcctcgctaagtttgctttttctagtagtgtat 13028813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 253 - 412
Target Start/End: Original strand, 33914037 - 33914196
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  |||||||||||||||||||||||||||| ||||| |||||||||||| ||||||||||||| |||||||||||||| |||||| |    
T  33914037 cactactaaaaaaacaaaaattagtgagggaaatttagtgaggaaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaaaaatttat 33914136  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||||||| || ||||||||||| |||||||||| |||||||||||||| |||||||||    
T  33914137 gaggaattttatgttttccgtcacaaatttccctccctaattttgcttttcctagtagtg 33914196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 283 - 413
Target Start/End: Complemental strand, 4586887 - 4586757
Alignment:
Q  283 aaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaattt 382  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||| |||||| ||| |||  |||||||||||||||||||||||||||||||||||||    
T  4586887 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttacgatcaaggaatttgtgaggaatttcattttttccgtcactaattt 4586788  T
Q  383 ccctcgctaattttgctttttctagtagtgt 413  Q
    |||||||||||||||||||||||||||||||    
T  4586787 ccctcgctaattttgctttttctagtagtgt 4586757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 287 - 412
Target Start/End: Complemental strand, 7112071 - 7111946
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    |||||||||||||| || |||||||||| ||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  7112071 ttagtgagggaaaatgtaaaatccctctataattccgtcactaaatttttcgaccaagaaatttgtgaggaatttcattttttccgtcactaatttccct 7111972  T
Q  387 cgctaattttgctttttctagtagtg 412  Q
    ||||||||||||||||||||||||||    
T  7111971 cgctaattttgctttttctagtagtg 7111946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 273 - 413
Target Start/End: Complemental strand, 13565054 - 13564914
Alignment:
Q  273 ttagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccg 372  Q
    ||||||||||||||||||||||||||||||| |||| ||||| ||||||||||||| ||||||  ||||||  ||||||||| |||||||||| ||||||    
T  13565054 ttagtgagggaaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttatgaccaaggaatttgtgatgaatttcattatttccg 13564955  T
Q  373 tcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  13564954 tcactaatttccctcgctaattttgctttttctagtagtgt 13564914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 268 - 412
Target Start/End: Original strand, 36689670 - 36689814
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||| |||| |||||||||||    
T  36689670 aaaaattagcgagggaaatttagtgtgggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaaaaatttatgagaaatttcatttt 36689769  T
Q  368 ttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    |||| |||||||||||||||| |||||||| ||||||| ||||||    
T  36689770 ttccatcactaatttccctcgttaattttgttttttcttgtagtg 36689814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 287 - 412
Target Start/End: Complemental strand, 9670604 - 9670479
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    ||||||||||||||||| |||| ||||| ||||||||||||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  9670604 ttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 9670505  T
Q  387 cgctaattttgctttttctagtagtg 412  Q
    |||||||||| |||||||||||||||    
T  9670504 cgctaatttttctttttctagtagtg 9670479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 253 - 402
Target Start/End: Original strand, 25147699 - 25147848
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||  |||||||    
T  25147699 cactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgt 25147798  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttt 402  Q
    ||||||||| || ||||||||||  |||||||||| ||||||||||||||    
T  25147799 gaggaattttatgttttccgtcataaatttccctctctaattttgctttt 25147848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 287 - 412
Target Start/End: Original strand, 38645762 - 38645887
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    ||||||||||||||||| |||||||||| ||| ||||||||| ||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||    
T  38645762 ttagtgagggaaaacgtaaaatccctctctaactccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcaataatttccct 38645861  T
Q  387 cgctaattttgctttttctagtagtg 412  Q
    ||||||||||||||||||||||||||    
T  38645862 cgctaattttgctttttctagtagtg 38645887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 253 - 413
Target Start/End: Original strand, 44783460 - 44783621
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctt-taattccgtcactgaattttgcgaccaataaatttg 351  Q
    ||||||||| |||  |||||||| ||||||| |||||  || ||||||| ||||||||||||| ||||||||||| | ||||||||||||||  ||||||    
T  44783460 cactactaaaaaaataaaaattaatgagggatatttatcgaaggaaaacatgaaatccctcttctaattccgtcattaaattttgcgaccaaggaatttg 44783559  T
Q  352 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  44783560 tgaggaatttcattttttccgtcactaatttccctcgctagttttgctttttctagtagtgt 44783621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 253 - 412
Target Start/End: Original strand, 5399587 - 5399746
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||||| |||||  |||||||    
T  5399587 cactactaacaaaacaaaaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcaaccaaggaatttgt 5399686  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||||||| || ||||||||||| ||||| |||| |||| ||||||||| |||||||||    
T  5399687 gaggaattttatgttttccgtcacaaattttcctccctaagtttgcttttcctagtagtg 5399746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 290 - 412
Target Start/End: Complemental strand, 9238747 - 9238625
Alignment:
Q  290 gtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccctcgc 389  Q
    |||||||||||||| ||||  |||| ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  9238747 gtgagggaaaacgtaaaatttctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcactaatttccctcgc 9238648  T
Q  390 taattttgctttttctagtagtg 412  Q
    |||||||||||||| ||||||||    
T  9238647 taattttgctttttttagtagtg 9238625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 287 - 413
Target Start/End: Original strand, 38619859 - 38619985
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    ||||||||||||||||| |||||||||| ||||||||||||| |||||| |||||||  ||||| |||||||||||||||||||||||| ||||||||||    
T  38619859 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttacgaccaaagaatttatgaggaatttcattttttccgtcattaatttccct 38619958  T
Q  387 cgctaattttgctttttctagtagtgt 413  Q
    |||||||||||||||||||||||||||    
T  38619959 cgctaattttgctttttctagtagtgt 38619985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 252 - 405
Target Start/End: Complemental strand, 30568159 - 30568006
Alignment:
Q  252 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttg 351  Q
    |||||||||| |||| |||||||||||| |||||||| |||||||||||||| ||||| |||| ||||||||||| | |||||| ||||||   ||||||    
T  30568159 tcactactaaaaaatcaaaaattagtgaaggaaattttgtgagggaaaacgtaaaatctctctctaattccgtcattaaattttacgaccatagaatttg 30568060  T
Q  352 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttct 405  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  30568059 tgaggaatttcattttttccgtcactaatttcgctcgctaattttgttttttct 30568006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 283 - 412
Target Start/End: Original strand, 54539294 - 54539423
Alignment:
Q  283 aaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaattt 382  Q
    ||||||||||||||||||||| ||||| |||||||||| ||||||| ||||||||||| ||  |||||||||||||||||||||||||||||||||||||    
T  54539294 aaatttagtgagggaaaacgtaaaatcactctttaattgcgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattt 54539393  T
Q  383 ccctcgctaattttgctttttctagtagtg 412  Q
     ||| |||||||||||||||||||||||||    
T  54539394 tccttgctaattttgctttttctagtagtg 54539423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 253 - 412
Target Start/End: Original strand, 8878861 - 8879020
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  |||||||||||| ||||||||||||||||||||| |||||||||||| |||||| |||||| ||||||||||||||  ||||| |    
T  8878861 cactactaaaaaaacaaaaattagtgacggaaatttagtgagggaaaacatgaaatccctctctaattctgtcactaaattttgcgaccaacgaatttct 8878960  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    |||  |||| ||||||||||||||||||||||||| || |||||||||||||| ||||||    
T  8878961 gagagattttattttttccgtcactaatttccctctctgattttgctttttcttgtagtg 8879020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 253 - 415
Target Start/End: Original strand, 12071940 - 12072102
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  |||||||||||||||| ||||||||| ||||||| | |||||||||| ||||||||||||| |||||||||| |||  ||||| |    
T  12071940 cactactaaaaaaagaaaaattagtgagggatatttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgatcaaggaatttat 12072039  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgtat 415  Q
    || |||||||||||||||  ||||||||||| |||||||||||||||||||||| ||||||||    
T  12072040 gaagaatttcattttttcgatcactaatttcgctcgctaattttgctttttctaatagtgtat 12072102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 287 - 412
Target Start/End: Original strand, 29625337 - 29625462
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |   |||||||||||||||||||||||||||||| ||||||||||    
T  29625337 ttagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgactatggaatttgtgaggaatttcattttttccgtcattaatttccct 29625436  T
Q  387 cgctaattttgctttttctagtagtg 412  Q
    ||||||||||||||||| || |||||    
T  29625437 cgctaattttgctttttatattagtg 29625462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 268 - 412
Target Start/End: Original strand, 1638440 - 1638584
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    |||||||||||||| ||||||||||||||||||| |||||| ||||  ||||||||||||| ||||||||||||||  ||| ||||||| |||| |||||    
T  1638440 aaaaattagtgaggaaaatttagtgagggaaaacatgaaattcctccctaattccgtcactaaattttgcgaccaaagaatatgtgagggattttatttt 1638539  T
Q  368 ttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    |||||||||||||||||||| ||||||||| |||| |||||||||    
T  1638540 ttccgtcactaatttccctccctaattttgtttttcctagtagtg 1638584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 283 - 411
Target Start/End: Complemental strand, 4627207 - 4627079
Alignment:
Q  283 aaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaattt 382  Q
    |||||||||||||||||| || ||||| |||| ||||| ||||||| |||||| ||| ||| ||||||||||||||||||||||||||||||| ||||||    
T  4627207 aaatttagtgagggaaaatgtaaaatctctctctaatttcgtcactaaattttacgatcaagaaatttgtgaggaatttcattttttccgtcattaattt 4627108  T
Q  383 ccctcgctaattttgctttttctagtagt 411  Q
    |||||||||||||||||||||||||||||    
T  4627107 ccctcgctaattttgctttttctagtagt 4627079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 268 - 412
Target Start/End: Original strand, 9913251 - 9913395
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    ||||||| ||||||||| ||||| ||||||||||||||||||||||| |||||| |||||| |||||||||||||| ||| |||||||| |||| |||||    
T  9913251 aaaaatttgtgagggaattttagagagggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccaagaaaattgtgagggatttaatttt 9913350  T
Q  368 ttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||||||||||||| |||| ||||||||  ||||||||||||||    
T  9913351 ttccgtcactaattttcctccctaattttaatttttctagtagtg 9913395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 283 - 413
Target Start/End: Original strand, 25026565 - 25026695
Alignment:
Q  283 aaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaattt 382  Q
    ||||||||||||||||||||| ||||| |||| ||||||||||||| ||||||||||| ||  |||||||||| ||||||||||||||||||||||||||    
T  25026565 aaatttagtgagggaaaacgtaaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgagaaatttcattttttccgtcactaattt 25026664  T
Q  383 ccctcgctaattttgctttttctagtagtgt 413  Q
    ||||| |||||||| ||||||||| ||||||    
T  25026665 ccctcactaattttactttttctaatagtgt 25026695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 287 - 412
Target Start/End: Complemental strand, 9239406 - 9239281
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    |||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||  |||||||||| ||||||||||||||||||||||||||||||    
T  9239406 ttagtgagggaaaacgtgaaatccctctctaattccgtcattcaattttgcgaccaaggaatttgtgagcaatttcattttttccgtcactaatttccct 9239307  T
Q  387 cgctaattttgctttttctagtagtg 412  Q
    || ||||||| || ||||| ||||||    
T  9239306 cgttaattttactctttcttgtagtg 9239281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 252 - 413
Target Start/End: Original strand, 16915346 - 16915507
Alignment:
Q  252 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttg 351  Q
    |||||||||| |||  |||||||||||| ||||||||||||||||||||  ||||||| |||| |||||  |||||| |||||||||||||| |||||||    
T  16915346 tcactactaaaaaaacaaaaattagtgacggaaatttagtgagggaaaatatgaaatctctctctaattttgtcactaaattttgcgaccaacaaatttg 16915445  T
Q  352 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    ||||  |||| ||||||||| |||||||||| |||| || ||||||||||||||||||||||    
T  16915446 tgagagattttattttttccatcactaattttcctccctgattttgctttttctagtagtgt 16915507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 283 - 412
Target Start/End: Original strand, 18714910 - 18715039
Alignment:
Q  283 aaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaattt 382  Q
    ||||||||| ||| ||||||| |||||||||| ||||||||||||| ||||||| ||||||  |||||||||||||||| ||||||||||||||| ||||    
T  18714910 aaatttagtaaggaaaaacgtaaaatccctctctaattccgtcactaaattttgagaccaaggaatttgtgaggaattttattttttccgtcacttattt 18715009  T
Q  383 ccctcgctaattttgctttttctagtagtg 412  Q
    ||||||||||| ||||||||||||||||||    
T  18715010 ccctcgctaatattgctttttctagtagtg 18715039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 253 - 411
Target Start/End: Complemental strand, 24682484 - 24682328
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  |||||||||||||||||||| |   |||||||||||||||||||||| |||||||  |||| |||||||||||||   |||||||    
T  24682484 cactactaaaaaagcaaaaattagtgagggaaattgaa--agggaaaacgtgaaatccctctctaattccaccactaaattttgcgaccatggaatttgt 24682387  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagt 411  Q
    ||||||||| ||||||||||||| ||||||||||| |||||||| ||||||||||||||    
T  24682386 gaggaattttattttttccgtcattaatttccctccctaatttttctttttctagtagt 24682328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 268 - 382
Target Start/End: Complemental strand, 18744214 - 18744100
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| ||||||  |||||  ||||||||||| |||||||||||    
T  18744214 aaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttatgaccatgaaatttgtgagaaatttcatttt 18744115  T
Q  368 ttccgtcactaattt 382  Q
    |||||||||||||||    
T  18744114 ttccgtcactaattt 18744100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 287 - 412
Target Start/End: Original strand, 30507999 - 30508124
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    |||||||||||||| || |||||||||| ||||||||||||| ||||||||||||||  |||||||||||||||| ||||||| ||||||  |||| |||    
T  30507999 ttagtgagggaaaatgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatttttttcgtcacagattttcct 30508098  T
Q  387 cgctaattttgctttttctagtagtg 412  Q
    ||||||||||||||||||||||||||    
T  30508099 cgctaattttgctttttctagtagtg 30508124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 268 - 413
Target Start/End: Original strand, 38223503 - 38223648
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    ||||||| ||||||||||||||| |||||||||||  |||||||||| |||||| |||||| ||||||||||||||  ||||||| |||||||| |||||    
T  38223503 aaaaatttgtgagggaaatttagagagggaaaacgcaaaatccctctctaattctgtcactaaattttgcgaccaaggaatttgtaaggaattttatttt 38223602  T
Q  368 ttccgtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    ||||||||||||| |||||| |||||||| | ||||||||| ||||    
T  38223603 ttccgtcactaatctccctccctaattttacattttctagtggtgt 38223648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 254 - 382
Target Start/End: Complemental strand, 22156759 - 22156631
Alignment:
Q  254 actactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtg 353  Q
    |||||||| |||  |||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||  ||||||||    
T  22156759 actactaaaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtg 22156660  T
Q  354 aggaatttcattttttccgtcactaattt 382  Q
    || ||||||||  ||||| ||||||||||    
T  22156659 agaaatttcataatttccttcactaattt 22156631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 287 - 382
Target Start/End: Original strand, 14944758 - 14944853
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaattt 382  Q
    ||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  14944758 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttacgtcactaattt 14944853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 287 - 412
Target Start/End: Original strand, 42055409 - 42055534
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    ||||||||| |||| || ||||| |||  ||||||||| ||| ||||||||||||||  |||||||||||||||||||||||| ||||||  ||||||||    
T  42055409 ttagtgaggaaaaatgtaaaatcactcactaattccgttactaaattttgcgaccaaggaatttgtgaggaatttcatttttttcgtcacagatttccct 42055508  T
Q  387 cgctaattttgctttttctagtagtg 412  Q
    ||||||||||||||||||||||||||    
T  42055509 cgctaattttgctttttctagtagtg 42055534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 287 - 413
Target Start/End: Complemental strand, 4606954 - 4606828
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    |||||||||||||| |||||||| |||| ||||||||||||| ||||||||| |||| ||||||||||   |||| ||||| ||||||||||||||||||    
T  4606954 ttagtgagggaaaaagtgaaatcactctctaattccgtcactaaattttgcggccaagaaatttgtgacagattttattttgtccgtcactaatttccct 4606855  T
Q  387 cgctaattttgctttttctagtagtgt 413  Q
    | |||||||| ||||| ||||||||||    
T  4606854 ccctaattttacttttcctagtagtgt 4606828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 290 - 412
Target Start/End: Complemental strand, 9059074 - 9058952
Alignment:
Q  290 gtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccctcgc 389  Q
    |||||||||||| |||||||||||| ||||||||||| | ||||||||||||||  |||||||||| ||||| || ||||| ||||| |||||||||| |    
T  9059074 gtgagggaaaacatgaaatccctctctaattccgtcattaaattttgcgaccaaggaatttgtgagaaattttatgttttcagtcacaaatttccctccc 9058975  T
Q  390 taattttgctttttctagtagtg 412  Q
    ||||||||||||| |||||||||    
T  9058974 taattttgcttttcctagtagtg 9058952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 287 - 412
Target Start/End: Original strand, 12105995 - 12106119
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    ||||||||||||||| ||||| |||||| ||||||||||||| ||||| ||||||||  ||||| |||| ||||| ||||||||| ||| ||||||||||    
T  12105995 ttagtgagggaaaacatgaaacccctctctaattccgtcactaaattt-gcgaccaaagaatttatgagaaattttattttttccatcaataatttccct 12106093  T
Q  387 cgctaattttgctttttctagtagtg 412  Q
    |||||||||| ||||||||| |||||    
T  12106094 cgctaattttactttttctaatagtg 12106119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 283 - 412
Target Start/End: Original strand, 45091282 - 45091398
Alignment:
Q  283 aaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaattt 382  Q
    ||||||||||||||||||||| |||||| ||| ||||||||||||| ||||||||||             ||||||||||||||||||||||||||||||    
T  45091282 aaatttagtgagggaaaacgtaaaatccttctctaattccgtcactaaattttgcga-------------gaggaatttcattttttccgtcactaattt 45091368  T
Q  383 ccctcgctaattttgctttttctagtagtg 412  Q
    ||||||||||||||| ||||||||||||||    
T  45091369 ccctcgctaattttgttttttctagtagtg 45091398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 268 - 412
Target Start/End: Complemental strand, 30420177 - 30420033
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    |||||||||||||  |||||||| | | |||||| |||||| ||||| ||||| ||||||| |||  | |||||||  ||||||| | |||||| |||||    
T  30420177 aaaaattagtgagaaaaatttagagtgagaaaacatgaaattcctctctaatttcgtcactaaatgcttcgaccaagtaatttgtaatgaattttatttt 30420078  T
Q  368 ttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||    
T  30420077 ttccgtcactaattttcctccctaattttgctttttctagtagtg 30420033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 253 - 342
Target Start/End: Complemental strand, 37762001 - 37761912
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgacca 342  Q
    ||||||||| |||| ||||| || ||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  37762001 cactactaaaaaatcaaaaaataatgaggaaaatttagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgacca 37761912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 253 - 412
Target Start/End: Original strand, 3612973 - 3613133
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| ||| ||||| |||||||| ||| ||||| |||| |||||||||||| ||||| ||||| ||||||| || |||||||||||  |||||||    
T  3612973 cactactaaaaaagaaaaacttagtgagagaattttagagaggaaaaacgtgaaattcctctctaatttcgtcactaaaatttgcgaccaaggaatttgt 3613072  T
Q  353 ga-ggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    || |||||||  ||||||  | ||| || ||||||| |||||||||||||||||| |||||    
T  3613073 gagggaatttattttttttagccaccaaattccctccctaattttgctttttctaatagtg 3613133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 268 - 405
Target Start/End: Original strand, 39234935 - 39235071
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcat-tt 366  Q
    ||||||||||||||||||||||| || ||||||||||||||  |||| |||||  || ||| |||||||||||||| ||||||||||| ||||| || ||    
T  39234935 aaaaattagtgagggaaatttagagaaggaaaacgtgaaat--ctctctaattttgttactaaattttgcgaccaaaaaatttgtgagaaattttatgtt 39235032  T
Q  367 tttccgtcactaatttccctcgctaattttgctttttct 405  Q
    ||||||| || | |||||||| ||||||||| |||||||    
T  39235033 tttccgttacaagtttccctccctaattttggtttttct 39235071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 268 - 411
Target Start/End: Original strand, 29238416 - 29238559
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    ||||||||| || ||||||||||||||| ||||| | ||||| || | |||||| |||||| |||||||  |||||  ||||||||||  |||| |||||    
T  29238416 aaaaattagcgatggaaatttagtgaggaaaaacataaaatctctatctaattctgtcactaaattttgaaaccaaagaatttgtgagagattttatttt 29238515  T
Q  368 ttccgtcactaatttccctcgctaattttgctttttctagtagt 411  Q
    |||||||| ||||||||||| ||| ||||| |||| ||||||||    
T  29238516 ttccgtcaataatttccctccctagttttgtttttcctagtagt 29238559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 283 - 396
Target Start/End: Original strand, 34557191 - 34557304
Alignment:
Q  283 aaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaattt 382  Q
    |||||||| ||||||||| || |||||  ||||||||||||||| | ||||||| ||||||  ||||||||| | |||| ||||||||||||||||||||    
T  34557191 aaatttagcgagggaaaaggtaaaatctgtctttaattccgtcattaaattttgtgaccaaggaatttgtgaaggattttattttttccgtcactaattt 34557290  T
Q  383 ccctcgctaatttt 396  Q
     |||| ||||||||    
T  34557291 tcctcactaatttt 34557304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 287 - 382
Target Start/End: Original strand, 6553816 - 6553911
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaattt 382  Q
    ||||||||||| ||| |||||||||||| |||||  || ||| |||||||||||||| |||||| ||||| |||| ||||||||||||||||||||    
T  6553816 ttagtgagggataacatgaaatccctctctaattatgttactaaattttgcgaccaagaaatttatgagggattttattttttccgtcactaattt 6553911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 268 - 413
Target Start/End: Original strand, 25225092 - 25225235
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    |||||||| |||| ||||||||| ||  |||| |||||||||||||| |||||| || | | |||||||||| |||  ||||||  ||  |||| || ||    
T  25225092 aaaaattaatgagagaaatttagagaaagaaatcgtgaaatccctctctaattctgttattaaattttgcgatcaaagaatttgacag--attttatatt 25225189  T
Q  368 ttccgtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    |||||||| | ||||||||| |||||||| ||||||||||||||||    
T  25225190 ttccgtcattgatttccctccctaatttttctttttctagtagtgt 25225235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 291 - 382
Target Start/End: Original strand, 313603 - 313694
Alignment:
Q  291 tgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaattt 382  Q
    ||||||| ||| |||||||||||| |||||  || ||| ||||||||||||||  ||||| ||||| |||| ||||||||||||||||||||    
T  313603 tgagggataacatgaaatccctctctaattatgttactaaattttgcgaccaaagaatttatgagggattttattttttccgtcactaattt 313694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 121; Significance: 1e-61; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 253 - 413
Target Start/End: Complemental strand, 9388 - 9228
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  |||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||| ||||||||||||||  |||||||    
T  9388 cactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacgtaaaatccttctctaattccgtcactaaattttgcgaccaaggaatttgt 9289  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  9288 gaggaatttcattttttccgtcactaatttccctcactaattttgctttttctagtagtgt 9228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 121; Significance: 1e-61; HSPs: 57)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 252 - 412
Target Start/End: Complemental strand, 20065234 - 20065074
Alignment:
Q  252 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttg 351  Q
    |||||||||| |||  ||||||||||||||||||||| |||||| |||||||||||||||||| |||||| |||||| |||||||||||||  |||||||    
T  20065234 tcactactaaaaaaacaaaaattagtgagggaaattttgtgaggaaaaacgtgaaatccctctctaattcagtcactaaattttgcgaccatgaaatttg 20065135  T
Q  352 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20065134 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 20065074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 253 - 412
Target Start/End: Complemental strand, 15636894 - 15636735
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  ||||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||| |||||||||||||  ||||||||    
T  15636894 cactactaaaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaatttcgtcactaaattttgcgaccatgaaatttgt 15636795  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  15636794 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctggtagtg 15636735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 252 - 405
Target Start/End: Original strand, 1141511 - 1141664
Alignment:
Q  252 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttg 351  Q
    |||||||||| |||  ||||||||||||||||||||| ||||||||||||||||||||||||| |||||| |||||| |||||||||||||  |||||||    
T  1141511 tcactactaaaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccatgaaatttg 1141610  T
Q  352 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttct 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1141611 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttct 1141664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 253 - 412
Target Start/End: Original strand, 32185808 - 32185967
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||| ||||||  |||||||     
T  32185808 cactactaaaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttacgaccatgaaatttgc 32185907  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  32185908 gaggaatttcattttttccgtcactaatttccctcgctaattttgttttttctagtagtg 32185967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 253 - 412
Target Start/End: Complemental strand, 37724151 - 37723992
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||  |||| |||||||| ||||||||||||||  |||||||    
T  37724151 cactactaaaaaataaaaaattagtgagagaaatttagtgagggaaaacgtgaaatccctcgctaataccgtcactaaattttgcgaccaaagaatttgt 37724052  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    |||||||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||    
T  37724051 gaggaatttcattttttccgtcactaatttccctcgctgatttttctttttctagcagtg 37723992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 253 - 414
Target Start/End: Complemental strand, 13788214 - 13788053
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  |||||||||||||| |||||||||||||||||| || |||||||||| ||||| ||||||| ||||||||||||||  |||||||    
T  13788214 cactactaaaaaaacaaaaattagtgaggaaaatttagtgagggaaaatgtaaaatccctctctaatttcgtcactaaattttgcgaccaaggaatttgt 13788115  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgta 414  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  13788114 gaggaatttcattttttccgtcactgatttccctcgctaattttgctttttctagtagtgta 13788053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 254 - 411
Target Start/End: Complemental strand, 23388535 - 23388379
Alignment:
Q  254 actactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtg 353  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||||  |||||||||    
T  23388535 actactaaaaaataaaaa-ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtg 23388437  T
Q  354 aggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagt 411  Q
    | ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  23388436 aagaatttcattttttccgtcaccaatttccctcgctaattttgttttttctagtagt 23388379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 252 - 413
Target Start/End: Complemental strand, 28841502 - 28841341
Alignment:
Q  252 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttg 351  Q
    |||||||||| |||  |||||||||||||||| |||||||| |||||||| |||||||||||| ||||||||||||| ||||||||||||||  ||||||    
T  28841502 tcactactaaaaaaacaaaaattagtgagggatatttagtgtgggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttg 28841403  T
Q  352 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  28841402 tgaggaatttcattttttccgttactaatttccctcgctaattttgcttttcctagtagtgt 28841341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 268 - 405
Target Start/End: Original strand, 32300442 - 32300579
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||||   ||||||||||||||||||||||    
T  32300442 aaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcatttt 32300541  T
Q  368 ttccgtcactaatttccctcgctaattttgctttttct 405  Q
    ||||||||||||||||||||||||||||||||||||||    
T  32300542 ttccgtcactaatttccctcgctaattttgctttttct 32300579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 251 - 415
Target Start/End: Complemental strand, 14757282 - 14757118
Alignment:
Q  251 atcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaattt 350  Q
    ||||||||||| |||  ||||||||||||| || ||||||||||||||||| ||||||| |||| ||||||||||||| |||||||||||||| ||||||    
T  14757282 atcactactaaaaaaacaaaaattagtgagtgatatttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaagaaattt 14757183  T
Q  351 gtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgtat 415  Q
    ||||||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||||    
T  14757182 gtgaggaatttcattttttccgtcattaattttcttcgctaattttgctttttctagtagtgtat 14757118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 252 - 412
Target Start/End: Original strand, 41736147 - 41736307
Alignment:
Q  252 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttg 351  Q
    |||||||||| |||  |||||||||||||| |||||||||||||||||| || |||||||||| ||||| ||||||| |||||||||| |||  ||||||    
T  41736147 tcactactaaaaaaacaaaaattagtgaggaaaatttagtgagggaaaatgtaaaatccctctctaatttcgtcactaaattttgcgatcaaggaatttg 41736246  T
Q  352 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41736247 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 41736307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 287 - 418
Target Start/End: Complemental strand, 43408636 - 43408505
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    ||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  43408636 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcactaatttccct 43408537  T
Q  387 cgctaattttgctttttctagtagtgtatcga 418  Q
    | ||||||||||||||||||||||||||||||    
T  43408536 cactaattttgctttttctagtagtgtatcga 43408505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 252 - 409
Target Start/End: Original strand, 28262339 - 28262496
Alignment:
Q  252 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttg 351  Q
    |||||||||| |||  ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| ||||||| |||||  |||||||    
T  28262339 tcactactaaaaaaataaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgtgaccatgaaatttg 28262438  T
Q  352 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagta 409  Q
    |||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||    
T  28262439 tgaggaatttcattttttccatcactaatttcccttgctaattttactttttctagta 28262496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 268 - 412
Target Start/End: Complemental strand, 22140508 - 22140364
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    ||||||||||||||||||||| ||||  ||||||||||||||||||| ||||||||||||| |||||||||||||   ||||||||||||||||||||||    
T  22140508 aaaaattagtgagggaaattttgtgaaagaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcatttt 22140409  T
Q  368 ttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  22140408 ttccgtcactaatttccctcgttaattttgctttttctagtagtg 22140364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 253 - 412
Target Start/End: Original strand, 30783314 - 30783473
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||| |||||||    
T  30783314 cactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaatgaatttgt 30783413  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||||||| || ||||||||||| |||||||||  |||||||||||||| |||||||||    
T  30783414 gaggaattttatgttttccgtcacaaatttcccttcctaattttgcttttcctagtagtg 30783473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 253 - 412
Target Start/End: Original strand, 41637594 - 41637753
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  |||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||  |||||||    
T  41637594 cactactaaaaaaacaaaaattagtgaggaaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgt 41637693  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||||||| || ||||||||||| |||||||||| ||||||||||||||||||||||||    
T  41637694 gaggaattttatgttttccgtcacaaatttccctccctaattttgctttttctagtagtg 41637753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 283 - 412
Target Start/End: Original strand, 12779606 - 12779735
Alignment:
Q  283 aaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaattt 382  Q
    ||||||||||||||||||||| |||| ||||| ||||| ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  12779606 aaatttagtgagggaaaacgtaaaattcctctctaatttcgtcactaaattttgcgaccaatgaatttgtgaggaatttcattttttccgtcactaattt 12779705  T
Q  383 ccctcgctaattttgctttttctagtagtg 412  Q
    ||||||||||||||||||||||||||||||    
T  12779706 ccctcgctaattttgctttttctagtagtg 12779735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 278 - 411
Target Start/End: Complemental strand, 28319713 - 28319580
Alignment:
Q  278 gagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcact 377  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||||   ||||||||||||||||||||||||||||||||    
T  28319713 gagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtcact 28319614  T
Q  378 aatttccctcgctaattttgctttttctagtagt 411  Q
    |||||||||| |||||||||||||||||||||||    
T  28319613 aatttccctcactaattttgctttttctagtagt 28319580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 273 - 413
Target Start/End: Original strand, 32008948 - 32009089
Alignment:
Q  273 ttagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttca-ttttttcc 371  Q
    ||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||| ||||||||||||||  |||||||||||||||||| ||||||||    
T  32008948 ttagtgagggaaatttaatgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcatttttttcc 32009047  T
Q  372 gtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  32009048 gtcactaattttcctcgctaattttgctttttctagtagtgt 32009089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 268 - 412
Target Start/End: Original strand, 8430287 - 8430431
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||| ||| ||  ||||||||||||||||| |||||    
T  8430287 aaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttacgatcataaaatttgtgaggaattttatttt 8430386  T
Q  368 ttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||    
T  8430387 ttccgtcactaatttcccccgctaattttgttttttctagtagtg 8430431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 268 - 412
Target Start/End: Complemental strand, 21293855 - 21293711
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||| ||||||||||||| |||||| ||||||   |||||||||| |||||||||||    
T  21293855 aaaaattagtgagggaaattttgtgagggaaaacgtgaaatctctctctaattccgtcactaaattttacgaccatggaatttgtgagaaatttcatttt 21293756  T
Q  368 ttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    |||||||||||||||||||||||||||||| ||||||||||||||    
T  21293755 ttccgtcactaatttccctcgctaattttgttttttctagtagtg 21293711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 253 - 412
Target Start/End: Complemental strand, 29749562 - 29749403
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  |||||||||||||| ||||||||||||||||||| |||||||||||  ||||||||||||| |||||||||||||| ||||||||    
T  29749562 cactactaaaaaaacaaaaattagtgaggaaaatttagtgagggaaaacatgaaatccctccctaattccgtcactaaattttgcgaccaagaaatttgt 29749463  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||||||| || ||||||||||| |||||||||  ||||||||||||||||||||||||    
T  29749462 gaggaattttatgttttccgtcacaaatttcccttcctaattttgctttttctagtagtg 29749403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 283 - 412
Target Start/End: Original strand, 37552233 - 37552362
Alignment:
Q  283 aaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaattt 382  Q
    |||||||||||||||||| || |||||||||| ||||||||||| | ||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  37552233 aaatttagtgagggaaaatgtaaaatccctctctaattccgtcattaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 37552332  T
Q  383 ccctcgctaattttgctttttctagtagtg 412  Q
    ||||||||||||||||||||||||||||||    
T  37552333 ccctcgctaattttgctttttctagtagtg 37552362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 268 - 412
Target Start/End: Complemental strand, 18551397 - 18551253
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    |||||||||||||||| ||||||||||||||||| | |||||||||| ||||||||||||| ||||||||||  ||  ||||||||||||||||||||||    
T  18551397 aaaaattagtgagggatatttagtgagggaaaacataaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcatttt 18551298  T
Q  368 ttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||    
T  18551297 ttccgtcactaattttcctcgctaattttgctttttttagtagtg 18551253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 253 - 412
Target Start/End: Complemental strand, 13613252 - 13613093
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  |||||||||  |||||| |||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||  |||||||    
T  13613252 cactactaaaaaaataaaaattagcaagggaagtttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgt 13613153  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||||||||||||||| |||||||||||| ||||||||||||| ||||||| |||||||    
T  13613152 gaggaatttcatttttttcgtcactaattttcctcgctaatttttctttttccagtagtg 13613093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 287 - 412
Target Start/End: Original strand, 7093578 - 7093703
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    ||||||||||||||||| |||||||||| |||||  |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  7093578 ttagtgagggaaaacgtaaaatccctctctaattttgtcactaaattttgcgaccaaaaaatttgtgaggaatttcattttttccgtcactaatttccct 7093677  T
Q  387 cgctaattttgctttttctagtagtg 412  Q
    |||||||||||||||| |||||||||    
T  7093678 cgctaattttgcttttactagtagtg 7093703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 255 - 418
Target Start/End: Original strand, 31266332 - 31266495
Alignment:
Q  255 ctactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtga 354  Q
    ||||||| |||| ||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||||| ||||||||||||||  |||||||||    
T  31266332 ctactaaaaaatcaaaaattagtgagggaaatttagcgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtga 31266431  T
Q  355 ggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgtatcga 418  Q
    ||||||| || |||||||| |  |||||||||| |||||||| ||||| ||||||||| |||||    
T  31266432 ggaattttatgttttccgtaaaaaatttccctccctaattttacttttcctagtagtgcatcga 31266495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 268 - 413
Target Start/End: Original strand, 27327607 - 27327752
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| | ||  |||||||||||||||| || ||    
T  27327607 aaaaattaatgagggaaatttagtgagggaaaacatgaaatccctctttaattccgtcactaaattttgcgtctaaggaatttgtgaggaattttatgtt 27327706  T
Q  368 ttccgtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    ||||||||| ||||||| || |||||||||||||| ||||||||||    
T  27327707 ttccgtcacaaatttccatccctaattttgcttttcctagtagtgt 27327752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 287 - 412
Target Start/End: Complemental strand, 44476500 - 44476375
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    ||||||| ||||||||| ||||| |||| ||||||||||||| ||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||    
T  44476500 ttagtgaaggaaaacgtaaaatctctctctaattccgtcactaaattttgcgaccaaggaatttgtgaagaatttcattttttccgtcactaatttccct 44476401  T
Q  387 cgctaattttgctttttctagtagtg 412  Q
    ||||||||||||||||||||||||||    
T  44476400 cgctaattttgctttttctagtagtg 44476375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 275 - 413
Target Start/End: Original strand, 44722930 - 44723068
Alignment:
Q  275 agtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtc 374  Q
    ||||||||| |||||||||| |||||  |||||||||||| ||||||||||||| ||||||||||| ||  ||||||| |||||||||||||||||| ||    
T  44722930 agtgagggatatttagtgagagaaaatatgaaatccctctctaattccgtcactaaattttgcgactaaggaatttgtaaggaatttcattttttccatc 44723029  T
Q  375 actaatttccctcgctaattttgctttttctagtagtgt 413  Q
    | |||||||||||||||||||||||||||||||||||||    
T  44723030 attaatttccctcgctaattttgctttttctagtagtgt 44723068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 283 - 412
Target Start/End: Complemental strand, 23858086 - 23857958
Alignment:
Q  283 aaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaattt 382  Q
    ||||||||||||||||||||| |||||  ||| ||||||||||||| ||||||||||||||  |||||||||||||||||| |||| |||||||||||||    
T  23858086 aaatttagtgagggaaaacgtaaaatcattctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttca-ttttcccgtcactaattt 23857988  T
Q  383 ccctcgctaattttgctttttctagtagtg 412  Q
    ||||||||||||||||||||||||||||||    
T  23857987 ccctcgctaattttgctttttctagtagtg 23857958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 317 - 412
Target Start/End: Complemental strand, 27040003 - 27039908
Alignment:
Q  317 aattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  27040003 aattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcactaatttccctctctaattttgctttttctagtagtg 27039908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 287 - 413
Target Start/End: Complemental strand, 26243446 - 26243320
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    ||||||||| ||||||| |||| ||||| ||||||||||||| |||||| |||||||| |||||||||||||||| |||||| ||| |||||||||||||    
T  26243446 ttagtgaggaaaaacgtaaaattcctctctaattccgtcactaaattttacgaccaatgaatttgtgaggaattttatttttaccgccactaatttccct 26243347  T
Q  387 cgctaattttgctttttctagtagtgt 413  Q
    || ||||||||||||||||||||||||    
T  26243346 cgttaattttgctttttctagtagtgt 26243320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 253 - 412
Target Start/End: Original strand, 40018778 - 40018937
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  |||||||||||| | ||||||||||||||||||| ||||||| |||| ||||||  |||||||||||||| |||||  |||||||    
T  40018778 cactactaaaaaaccaaaaattagtgacgaaaatttagtgagggaaaacatgaaatctctctctaattctctcactgaattttgcaaccaacgaatttgt 40018877  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
     || ||||| ||||||||||||||||||||||||   |||||||| ||||||||||||||    
T  40018878 aagaaattttattttttccgtcactaatttccctttttaattttgttttttctagtagtg 40018937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 268 - 402
Target Start/End: Complemental strand, 44366141 - 44366007
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    ||||||||||||||||| |||||||||| ||||| |||||||||||| ||||||| ||| ||||||||| ||||||  |||||||||||||||| |||||    
T  44366141 aaaaattagtgagggaagtttagtgaggaaaaacatgaaatccctctctaattccctcattgaattttgtgaccaacgaatttgtgaggaattttatttt 44366042  T
Q  368 ttccgtcactaatttccctcgctaattttgctttt 402  Q
    ||| |||| ||||||||||| ||||||||| ||||    
T  44366041 ttctgtcattaatttccctctctaattttgttttt 44366007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 268 - 412
Target Start/End: Complemental strand, 26687835 - 26687690
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttca-ttt 366  Q
    ||||||||||||| |||||||||||| ||||||| |||||||| ||| ||||||||||||| |||||||| |||||  |||||||||| ||||| | |||    
T  26687835 aaaaattagtgagcgaaatttagtgacggaaaacatgaaatccatctctaattccgtcactaaattttgcaaccaaggaatttgtgagaaattttatttt 26687736  T
Q  367 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||||||| |||||||||||  |||||||||||| ||||||||||    
T  26687735 tttccgtcattaatttccctccttaattttgctttatctagtagtg 26687690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 285 - 414
Target Start/End: Original strand, 36550844 - 36550972
Alignment:
Q  285 atttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttcc 384  Q
    ||||||||||||||||| |||||||||||| ||||||| ||||| ||||||||||||||  || |||||||| |||| ||||||||| ||||||||||||    
T  36550844 atttagtgagggaaaacatgaaatccctctataattccatcactaaattttgcgaccaaataacttgtgagggattt-attttttccatcactaatttcc 36550942  T
Q  385 ctcgctaattttgctttttctagtagtgta 414  Q
    ||| ||||||||| ||||||||||||||||    
T  36550943 ctctctaattttgttttttctagtagtgta 36550972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 268 - 402
Target Start/End: Complemental strand, 18916544 - 18916411
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    ||||||||||||| ||||||||| |||||||||| |||||||||||| |||||| |||||| |||||||||| ||| |||||||||||| |||| | |||    
T  18916544 aaaaattagtgagagaaatttagggagggaaaacatgaaatccctctctaattcagtcactaaattttgcgatcaaaaaatttgtgagggatttta-ttt 18916446  T
Q  368 ttccgtcactaatttccctcgctaattttgctttt 402  Q
    |||||||| ||||||||||  ||||||||||||||    
T  18916445 ttccgtcagtaatttccctgcctaattttgctttt 18916411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 268 - 413
Target Start/End: Original strand, 2556086 - 2556231
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    ||||||||||||||||| ||||| ||||||||| |||||||   ||| ||||||||||||| |||||| | ||||| ||||||||||| ||||| |||||    
T  2556086 aaaaattagtgagggaattttagagagggaaaatgtgaaatttttctctaattccgtcactaaattttacaaccaagaaatttgtgagaaattttatttt 2556185  T
Q  368 ttccgtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    |||| |||||||||| |||| |||||||| |||||| |||||||||    
T  2556186 ttccatcactaattttcctctctaattttactttttttagtagtgt 2556231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 252 - 412
Target Start/End: Complemental strand, 37802538 - 37802379
Alignment:
Q  252 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttg 351  Q
    |||||||||| |||  || |||||||||||||||||||| |||||||||||| |||||  ||| ||||||||||||| |||||||||||||| ||| |||    
T  37802538 tcactactaaaaaaacaacaattagtgagggaaatttagagagggaaaacgtaaaatcagtctctaattccgtcactaaattttgcgaccaa-aaaattg 37802440  T
Q  352 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
     |||  |||| |||||||||||||  |||||| ||| |||||||||||||| |||||||||    
T  37802439 cgagagattttattttttccgtcatcaatttctctccctaattttgcttttcctagtagtg 37802379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 287 - 407
Target Start/End: Complemental strand, 38362396 - 38362276
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    |||| |||||||||||| |||||| | | |||||| |||||| |||||| |||||||  |||||||||||||||||||||||||||||||||||||||||    
T  38362396 ttagcgagggaaaacgtaaaatccttttctaattctgtcacttaattttacgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 38362297  T
Q  387 cgctaattttgctttttctag 407  Q
      |||||||||||||||||||    
T  38362296 tactaattttgctttttctag 38362276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 268 - 412
Target Start/End: Complemental strand, 9004452 - 9004308
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    ||||||||||||||||||||||||||||||||| || ||||  |||| ||||||| ||||| |||||||  || ||  ||||| |||| ||||||||||     
T  9004452 aaaaattagtgagggaaatttagtgagggaaaatgtaaaatttctctctaattccatcactaaattttgtaactaaggaatttatgagaaatttcatttc 9004353  T
Q  368 ttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||||||||||| | ||||| |||||||  ||||||||||||||    
T  9004352 ttccgtcactaatattcctcgttaattttattttttctagtagtg 9004308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 253 - 343
Target Start/End: Original strand, 27522987 - 27523077
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaa 343  Q
    ||||||||| |||  |||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||    
T  27522987 cactactaaaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaa 27523077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 253 - 413
Target Start/End: Original strand, 36373876 - 36374034
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  |||||||||||||| |||||||||||||||||| ||||||| ||||  |||||| |||||| |||||| ||| |||  ||||||     
T  36373876 cactactaaaaaaacaaaaattagtgaggaaaatttagtgagggaaaatgtgaaattcctc--taattcagtcactaaattttacgatcaaggaatttga 36373973  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    |||| |||| |||||||||||| |||| ||  ||| ||||||||| |||| ||||||||||    
T  36373974 gagggattttattttttccgtcgctaaatttactccctaattttgtttttcctagtagtgt 36374034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 268 - 412
Target Start/End: Original strand, 22192183 - 22192314
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    |||||||||||| ||||||||||||||||||||| |||||||||||| |||||             ||| ||||||||||||||||||  |||| |||||    
T  22192183 aaaaattagtgacggaaatttagtgagggaaaacatgaaatccctctctaatt-------------ttgtgaccaataaatttgtgagagattttatttt 22192269  T
Q  368 ttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    |||||||||||||||| ||| || |||||||||||||||||||||    
T  22192270 ttccgtcactaatttctctccctgattttgctttttctagtagtg 22192314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 263 - 395
Target Start/End: Original strand, 35697442 - 35697573
Alignment:
Q  263 aaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttc 362  Q
    ||||||||||||| | ||| ||||||||  | | ||||| |||||| ||||| ||||||||||||| |||||||||||||| |||||||||||  ||||     
T  35697442 aaataaaaaattaataaggaaaatttagc-atgaaaaacatgaaattcctctctaattccgtcactaaattttgcgaccaaaaaatttgtgagagatttt 35697540  T
Q  363 attttttccgtcactaatttccctcgctaattt 395  Q
    ||||||||||| ||||||||||||| |||||||    
T  35697541 attttttccgttactaatttccctccctaattt 35697573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 253 - 350
Target Start/End: Complemental strand, 29998718 - 29998621
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaattt 350  Q
    ||||||||| |||  ||||||||||||||||| ||||| || |||||||||||||||| ||| ||||||||||||| |||||||||  ||||||||||    
T  29998718 cactactaaaaaagtaaaaattagtgagggaattttagagaaggaaaacgtgaaatccttctctaattccgtcactaaattttgcgttcaataaattt 29998621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 269 - 413
Target Start/End: Original strand, 18609506 - 18609650
Alignment:
Q  269 aaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttt 368  Q
    |||||||||| |||||||||||||||||||||| |||||| ||||| ||||| | | ||  |||||||||| |||  ||||||||||| |||  |||||     
T  18609506 aaaattagtgggggaaatttagtgagggaaaacatgaaatacctctctaatttcatgacaaaattttgcgatcaaggaatttgtgagggattctattttc 18609605  T
Q  369 tccgtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    |||||||||||||| ||||  || |||| ||||| ||| ||||||    
T  18609606 tccgtcactaattttcctccttatttttacttttcctaatagtgt 18609650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 268 - 395
Target Start/End: Original strand, 9590461 - 9590588
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    ||||||||||||||||||||||| |||  ||||||||||||| |||| |||||  || ||| ||||||||||  ||  ||||| | |   ||||||||||    
T  9590461 aaaaattagtgagggaaatttagcgagcaaaaacgtgaaatcgctctctaattttgttactaaattttgcgatgaagtaatttttaaaagatttcatttt 9590560  T
Q  368 ttccgtcactaatttccctcgctaattt 395  Q
    |||||||||||||||||||| |||||||    
T  9590561 ttccgtcactaatttccctccctaattt 9590588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 267 - 386
Target Start/End: Complemental strand, 13134765 - 13134646
Alignment:
Q  267 aaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattt 366  Q
    ||||||||||||||  |||||||| || ||||||| |||||||||| | |||||  |||| | |||||| |||| || ||| |||||||| |||| ||||    
T  13134765 aaaaaattagtgagaaaaatttagagatggaaaacttgaaatccctttctaattttgtcaataaattttacgactaaaaaaattgtgagggattttattt 13134666  T
Q  367 tttccgtcactaatttccct 386  Q
    ||||||||||||||||||||    
T  13134665 tttccgtcactaatttccct 13134646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 253 - 321
Target Start/End: Complemental strand, 27058475 - 27058407
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattc 321  Q
    ||||||||| |||  |||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  27058475 cactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattc 27058407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 267 - 400
Target Start/End: Original strand, 8763624 - 8763757
Alignment:
Q  267 aaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattt 366  Q
    |||||||||||||   ||||||||||| ||||||| |||||||| ||| ||||||||||| | ||||||  || |||  |||||||| |  |||| ||||    
T  8763624 aaaaaattagtgaaaaaaatttagtgaaggaaaacatgaaatccatctctaattccgtcattaaattttatgatcaaggaatttgtgcgagattttattt 8763723  T
Q  367 tttccgtcactaatttccctcgctaattttgctt 400  Q
    ||||||||||||| ||  ||| ||||||||||||    
T  8763724 tttccgtcactaacttttctccctaattttgctt 8763757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 345 - 406
Target Start/End: Complemental strand, 12860296 - 12860235
Alignment:
Q  345 aaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttcta 406  Q
    ||||| |||||| |||||| |||||||||||||||||| |||| ||||||||||||||||||    
T  12860296 aaattagtgagggatttcactttttccgtcactaattttcctccctaattttgctttttcta 12860235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 330 - 412
Target Start/End: Complemental strand, 16098999 - 16098917
Alignment:
Q  330 aattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    |||||||| |||||  || |||||||  |||| |||||||| || ||||||||||||| ||||||||| ||||||||||||||    
T  16098999 aattttgcaaccaaggaaattgtgagagatttaattttttctgttactaatttccctccctaattttgatttttctagtagtg 16098917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 252 - 387
Target Start/End: Complemental strand, 24117389 - 24117254
Alignment:
Q  252 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttg 351  Q
    |||||||||| |||  |||||||||||||| |||||||| || | ||||| |||||| | ||| ||||||||||| || |||||| ||| |  |||||      
T  24117389 tcactactaagaaaacaaaaattagtgaggaaaatttagagaagaaaaacatgaaattcatctctaattccgtcattgcattttgtgactaggaaattaa 24117290  T
Q  352 tgaggaatttcattttttccgtcactaatttccctc 387  Q
    |||   |||||| ||||||| ||||| |||||||||    
T  24117289 tgacatatttcactttttccatcactgatttccctc 24117254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 289 - 382
Target Start/End: Complemental strand, 31966647 - 31966555
Alignment:
Q  289 agtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaattt 382  Q
    ||||||||| ||| ||||||| |||| |||||  || ||| ||||||||||||||  ||||| | ||| |||| ||||||||||||||||||||    
T  31966647 agtgagggataacatgaaatctctctctaattatgttactaaattttgcgaccaaggaatttat-agggattttattttttccgtcactaattt 31966555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 268 - 314
Target Start/End: Complemental strand, 16099048 - 16099002
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctct 314  Q
    ||||||| ||||||||| ||||| |||||||| ||||||||||||||    
T  16099048 aaaaatttgtgagggaattttagagagggaaagcgtgaaatccctct 16099002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 120; Significance: 4e-61; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 253 - 412
Target Start/End: Complemental strand, 6138 - 5979
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  |||||||||||||||||||||||||||||||||||| |||||||||| ||||||| ||||| ||||||||||||||  |||||||    
T  6138 cactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccatcactaaattttgcgaccaaggaatttgt 6039  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  6038 gaggaatttcattttttccgtcactaatttccctcgctaattttgttttttctagtagtg 5979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 118; Significance: 6e-60; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 251 - 412
Target Start/End: Original strand, 84281 - 84442
Alignment:
Q  251 atcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaattt 350  Q
    ||||||||||| |||  ||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||||||||| ||||||| |||||  ||||||    
T  84281 atcactactaaaaaaacaaaaattagtgagggaaattttgtgagggaaaatgtgaaatccctctctaattccgtcactaaattttgtgaccatgaaattt 84380  T
Q  351 gtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  84381 gtgaggaatttcattttttccgtcactaatttcccttgctaattttgctttttctagtagtg 84442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 268 - 415
Target Start/End: Complemental strand, 8254 - 8107
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||  ||||||| ||||||||||||||    
T  8254 aaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgttaggaatttcatttt 8155  T
Q  368 ttccgtcactaatttccctcgctaattttgctttttctagtagtgtat 415  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||    
T  8154 ttccgtcattaatttccctcgctaattttgctttttctagaagtgtat 8107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 268 - 415
Target Start/End: Complemental strand, 21986 - 21839
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||  ||||||| ||||||||||||||    
T  21986 aaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgttaggaatttcatttt 21887  T
Q  368 ttccgtcactaatttccctcgctaattttgctttttctagtagtgtat 415  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||    
T  21886 ttccgtcattaatttccctcgctaattttgctttttctagaagtgtat 21839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 116; Significance: 9e-59; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 268 - 411
Target Start/End: Original strand, 7500 - 7643
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcatttt 367  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||| |||||| ||||||||||||| ||    
T  7500 aaaatttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttatgaggaatttcatatt 7599  T
Q  368 ttccgtcactaatttccctcgctaattttgctttttctagtagt 411  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  7600 ttccgtcactaatttccctcgctaattttgctttttctagtagt 7643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 115; Significance: 4e-58; HSPs: 4)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 277 - 415
Target Start/End: Original strand, 3746 - 3884
Alignment:
Q  277 tgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcac 376  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||  |||||||||||||||||||||||||||||||    
T  3746 tgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcac 3845  T
Q  377 taatttccctcgctaattttgctttttctagtagtgtat 415  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  3846 taattttcctcgctaattttgctttttctagtagtgtat 3884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 267 - 412
Target Start/End: Original strand, 202768 - 202913
Alignment:
Q  267 aaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattt 366  Q
    ||||||||||||||| ||||||||||||||||||||| |||| ||||| ||||||||||||| ||||||||||||||  |||||||||| ||||||||||    
T  202768 aaaaaattagtgaggaaaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgagcaatttcattt 202867  T
Q  367 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    
T  202868 tttccgtcactaatttccctcgctaatttttctttttctagtagtg 202913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 346 - 412
Target Start/End: Complemental strand, 274731 - 274665
Alignment:
Q  346 aatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  274731 aatttgtgaagaatttcattttttccgtcactaatttccctcgctaattttgttttttctagtagtg 274665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 251 - 339
Target Start/End: Complemental strand, 276295 - 276207
Alignment:
Q  251 atcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcga 339  Q
    ||||||||||| | |  ||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||| ||||||||||    
T  276295 atcactactaaaagaacaaaaattagtgagggaaattttgtgagagaaaacgtgaaatccctctctaattccgtcactaaattttgcga 276207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 110; Significance: 4e-55; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 273 - 414
Target Start/End: Original strand, 26483 - 26624
Alignment:
Q  273 ttagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccg 372  Q
    ||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||  |||||||||||||||||||||||||||    
T  26483 ttagtgagggacatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccg 26582  T
Q  373 tcactaatttccctcgctaattttgctttttctagtagtgta 414  Q
    |||||||||||| || ||||||||||||||||||||||||||    
T  26583 tcactaatttccgtcactaattttgctttttctagtagtgta 26624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 110; Significance: 4e-55; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 253 - 414
Target Start/End: Complemental strand, 39862 - 39701
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  |||||||||||||||||||||  ||||||||||||||||||| |||| ||||||||||||| |||||||| ||||  |||||||     
T  39862 cactactaaaaaaacaaaaattagtgagggaaattttatgagggaaaacgtgaaatctctctctaattccgtcactaaattttgcaaccatgaaatttgg 39763  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgta 414  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  39762 gaggaatttcattttttccatcactaatttccctcgctaattttgctttttctagtagtgta 39701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 110; Significance: 4e-55; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 251 - 412
Target Start/End: Original strand, 219614 - 219775
Alignment:
Q  251 atcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaattt 350  Q
    ||||||||||| |||  ||||||||||||| || ||||||||||||||||| |||||||||||| ||||||||| ||| ||||||||||  || ||||||    
T  219614 atcactactaaaaaaacaaaaattagtgagagatatttagtgagggaaaacatgaaatccctctctaattccgttactaaattttgcgattaaaaaattt 219713  T
Q  351 gtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  219714 gtgaggaatttcattttttccgtcactaatttccgtcgctaattttgctttttctagtagtg 219775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 287 - 411
Target Start/End: Original strand, 182544 - 182668
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    |||||||||||||  || |||||||||| ||||||||||||| ||||||||||||||  |||||||||| ||||||||||||||||||||||||||||||    
T  182544 ttagtgagggaaattgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagaaatttcattttttccgtcactaatttccct 182643  T
Q  387 cgctaattttgctttttctagtagt 411  Q
    |||||||||| ||||||||||||||    
T  182644 cgctaattttactttttctagtagt 182668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 287 - 412
Target Start/End: Complemental strand, 215781 - 215663
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    ||||||||||||||||| |||||||||| |||||||||        |||||||||||  ||||||||||||||||||||||||||||| |||||||| ||    
T  215781 ttagtgagggaaaacgtaaaatccctctctaattccgta-------tttgcgaccaaggaatttgtgaggaatttcattttttccgtcgctaatttctct 215689  T
Q  387 cgctaattttgctttttctagtagtg 412  Q
    ||||||||||||||||| ||||||||    
T  215688 cgctaattttgctttttttagtagtg 215663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 109; Significance: 1e-54; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 253 - 413
Target Start/End: Original strand, 12633 - 12792
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  ||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||| |||||||||||||   ||||| |    
T  12633 cactactaagaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaa-tccctctctaattccgtcactaaattttgcgaccatagaatttat 12731  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  12732 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttcaagtagtgt 12792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 108; Significance: 6e-54; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 253 - 412
Target Start/End: Complemental strand, 37946 - 37787
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  ||||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||| |||||||||||||  ||||||||    
T  37946 cactactaaaaaaacaaaaattagtgagggaaattttgtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccataaaatttgt 37847  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||||||| |||||||||||||||||||||||  |||||||||| ||||||||||||||    
T  37846 gaggaattttattttttccgtcactaatttcccctgctaattttgttttttctagtagtg 37787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 108; Significance: 6e-54; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 253 - 412
Target Start/End: Original strand, 58562 - 58721
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||||||||||| |||||| |    
T  58562 cactactaaaaaaataaaaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaagaaattttt 58661  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||||||| || ||||||||||| |||||||||| |||||||||||||| |||||||||    
T  58662 gaggaattttatgttttccgtcacaaatttccctccctaattttgcttttcctagtagtg 58721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 107; Significance: 2e-53; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 283 - 413
Target Start/End: Complemental strand, 15119 - 14989
Alignment:
Q  283 aaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaattt 382  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||| |||||| ||||||||||||||||||| |||||||||||    
T  15119 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttatgaggaatttcattttttcggtcactaattt 15020  T
Q  383 ccctcgctaattttgctttttctagtagtgt 413  Q
    |||||||||||||||||||||||||||||||    
T  15019 ccctcgctaattttgctttttctagtagtgt 14989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 106; Significance: 9e-53; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 253 - 414
Target Start/End: Complemental strand, 74700 - 74539
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||||||||||| |||||| |    
T  74700 cactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttat 74601  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgta 414  Q
    ||||||||| || ||||||||||| |||||||||| |||||||| ||||| |||||||||||    
T  74600 gaggaattttatgttttccgtcacaaatttccctccctaattttacttttcctagtagtgta 74539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 103; Significance: 5e-51; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 268 - 413
Target Start/End: Complemental strand, 1063 - 917
Alignment:
Q  268 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttca-ttt 366  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||  ||||| |||||||||| | |||    
T  1063 aaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttatgaggaattttatttt 964  T
Q  367 tttccgtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||    
T  963 tttccgtcagtaatttccctcgctaattttgctttttctagtagtgt 917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 102; Significance: 2e-50; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 283 - 412
Target Start/End: Original strand, 22221 - 22350
Alignment:
Q  283 aaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaattt 382  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||| ||  |||||||||||||||||||||||| ||||||||||||    
T  22221 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcatttttttcgtcactaattt 22320  T
Q  383 ccctcgctaattttgctttttctagtagtg 412  Q
    ||||||||||||||||||||||||||||||    
T  22321 ccctcgctaattttgctttttctagtagtg 22350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 101; Significance: 8e-50; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 253 - 409
Target Start/End: Original strand, 7436 - 7592
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||| || |||||||| ||  | |||||    
T  7436 cactactaaaaaataaaaaattaatgagggaaatttagtgagggaaaacgtgaaatccctctctaattctgtcactaaactttgcgactaaggattttgt 7535  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagta 409  Q
    || ||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||    
T  7536 gaagaatttcattttttccgtcactaattttcctcgttaattttactttttctagta 7592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 101; Significance: 8e-50; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 251 - 415
Target Start/End: Original strand, 6773 - 6937
Alignment:
Q  251 atcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaattt 350  Q
    ||||||||||| |||  |||||||||| ||||||||||||||||||||||| |||||| ||||| ||||||||||| | |||||||| || || ||||||    
T  6773 atcactactaaaaaaacaaaaattagtaagggaaatttagtgagggaaaacatgaaattcctctctaattccgtcattaaattttgcaacgaagaaattt 6872  T
Q  351 gtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgtat 415  Q
    | || |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  6873 gcgaagaatttcattttttccgtcaataatttccctcgctaattttgctttttctagtaatgtat 6937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 101; Significance: 8e-50; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 283 - 415
Target Start/End: Complemental strand, 10792 - 10660
Alignment:
Q  283 aaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaattt 382  Q
    ||||||||||||||||||||| |||| ||||| ||||||||||||| ||||||||||| ||  |||||||||||||||||||||||||||||||||||||    
T  10792 aaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattt 10693  T
Q  383 ccctcgctaattttgctttttctagtagtgtat 415  Q
    ||||||||||||||||||||||||| |||||||    
T  10692 ccctcgctaattttgctttttctagcagtgtat 10660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 95; Significance: 3e-46; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 271 - 413
Target Start/End: Original strand, 43915 - 44057
Alignment:
Q  271 aattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttc 370  Q
    ||||||||||| ||||||||||||||||||||| |||| | ||| ||||||||| | | ||||||||||||||  |||||||||||||||||||||||||    
T  43915 aattagtgaggaaaatttagtgagggaaaacgtaaaattcttctctaattccgttattaaattttgcgaccaaagaatttgtgaggaatttcattttttc 44014  T
Q  371 cgtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    | |||||||||||||||||||||||| ||||||||||||||||    
T  44015 catcactaatttccctcgctaatttttctttttctagtagtgt 44057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 94; Significance: 1e-45; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 251 - 412
Target Start/End: Original strand, 10136 - 10297
Alignment:
Q  251 atcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaattt 350  Q
    ||||||||||| |||  |||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||| ||||||||||  ||  |||||    
T  10136 atcactactaaaaaaataaaaattagtgagggaaatttactgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgattaaagaattt 10235  T
Q  351 gtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||||||||| || ||||||||||| |||||||||| |||||||||||||| |||| ||||    
T  10236 gtgaggaattttatgttttccgtcacaaatttccctccctaattttgcttttcctagcagtg 10297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 90; Significance: 3e-43; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 287 - 408
Target Start/End: Complemental strand, 84799 - 84678
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    ||||||||||||||||| |||||||||| ||||||| ||||| ||||||||||||||  ||||||||||||||||||||||||| |||||||||||||||    
T  84799 ttagtgagggaaaacgtaaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaatttcattttttctgtcactaatttccct 84700  T
Q  387 cgctaattttgctttttctagt 408  Q
    | ||||||||||||||||||||    
T  84699 cactaattttgctttttctagt 84678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 275 - 412
Target Start/End: Complemental strand, 121124 - 120987
Alignment:
Q  275 agtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtc 374  Q
    |||||||||| ||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||||||| ||||| ||||||| | |     
T  121124 agtgagggaattttagagagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgagaaattttatttttttcata 121025  T
Q  375 actaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||||||||||| |||||||| |||||| ||||||||    
T  121024 actaatttccctctctaattttactttttttagtagtg 120987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0655 (Bit Score: 88; Significance: 5e-42; HSPs: 1)
Name: scaffold0655
Description:

Target: scaffold0655; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 252 - 418
Target Start/End: Complemental strand, 3320 - 3156
Alignment:
Q  252 tcactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttg 351  Q
    |||||||||| |||  ||||||| |||||||||||||||  |||||||||||||||||||||  |||||| |||||| |||||||||||||  |||||||    
T  3320 tcactactaaaaaagcaaaaatttgtgagggaaatttag--agggaaaacgtgaaatccctcactaattctgtcactaaattttgcgaccatgaaatttg 3223  T
Q  352 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgtatcga 418  Q
    ||||||| || || |||||||||||||||||||||| |||||||| ||||||||| |||||| ||||    
T  3222 tgaggaactttatcttttccgtcactaatttccctccctaatttttctttttctattagtgtgtcga 3156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 87; Significance: 2e-41; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 287 - 413
Target Start/End: Original strand, 439977 - 440103
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccct 386  Q
    |||||||||||||| || |||||||||| ||||||||||||| |||||||||| ||| |||||||||||||||||||||||||||||||||||| | |||    
T  439977 ttagtgagggaaaatgtaaaatccctctctaattccgtcactaaattttgcgatcaagaaatttgtgaggaatttcattttttccgtcactaatattcct 440076  T
Q  387 cgctaattttgctttttctagtagtgt 413  Q
     ||||||||| ||||||||||||||||    
T  440077 tgctaattttactttttctagtagtgt 440103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 86; Significance: 7e-41; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 253 - 409
Target Start/End: Complemental strand, 74877 - 74720
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaa-cgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttg 351  Q
    ||||||||| |||  |||||||||||| ||| |||||||||||||||| | |||||||||||| |||||| |||||| |||||| ||||||   ||||||    
T  74877 cactactaaaaaaacaaaaattagtgaaggatatttagtgagggaaaaacatgaaatccctctctaattctgtcactaaattttacgaccagagaatttg 74778  T
Q  352 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagta 409  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  74777 tgagaaatttcattttttccgtcactaatttcccttgctaattttgccttttctagta 74720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 81; Significance: 7e-38; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 267 - 412
Target Start/End: Original strand, 173438 - 173584
Alignment:
Q  267 aaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaa--tttgtgaggaatttcat 364  Q
    ||||||||||||| ||| ||||||||||||||||| | ||||| |||| ||||||||||||| ||||||||||||||  ||  ||| |||| ||||||||    
T  173438 aaaaaattagtgatggatatttagtgagggaaaacataaaatcactctctaattccgtcactaaattttgcgaccaaagaatttttatgagaaatttcat 173537  T
Q  365 tttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||||    
T  173538 tttttccgtcactaattt-cctcgctaattttgctttttctaatagtg 173584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0502 (Bit Score: 74; Significance: 1e-33; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 253 - 402
Target Start/End: Original strand, 10872 - 11021
Alignment:
Q  253 cactactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgt 352  Q
    ||||||||| |||  |||||||||||||||||||||| ||||| ||||| |||||| ||||| |||||| |||||| ||||||| ||||||  |||||||    
T  10872 cactactaaaaaaccaaaaattagtgagggaaatttactgaggaaaaacatgaaattcctctctaattctgtcactaaattttgtgaccaaggaatttgt 10971  T
Q  353 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttt 402  Q
    ||||||||| || |||| |||||| ||||||| || ||||||||||||||    
T  10972 gaggaattttatatttttcgtcacaaatttccttccctaattttgctttt 11021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 324 - 412
Target Start/End: Complemental strand, 17705 - 17617
Alignment:
Q  324 tcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtg 412  Q
    ||||| || |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  17705 tcactaaagtttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgttttttctagtagtg 17617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0554 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold0554
Description:

Target: scaffold0554; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 346 - 413
Target Start/End: Original strand, 9883 - 9950
Alignment:
Q  346 aatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagtgt 413  Q
    |||||||||| ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  9883 aatttgtgagaaatttcattttttccttcactaatttcactcgctaattttgctttttctagtagtgt 9950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 254 - 343
Target Start/End: Original strand, 112309 - 112398
Alignment:
Q  254 actactaataaataaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaa 343  Q
    |||||||| ||| ||||||||||||||| ||||| || |||| ||||||| |||||||||| ||||||||||| | |||||||| |||||    
T  112309 actactaaaaaagaaaaaattagtgaggaaaattcagagaggaaaaacgttaaatccctctctaattccgtcattaaattttgcaaccaa 112398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0284 (Bit Score: 44; Significance: 9e-16; HSPs: 1)
Name: scaffold0284
Description:

Target: scaffold0284; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 287 - 382
Target Start/End: Complemental strand, 1644 - 1549
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaattt 382  Q
    ||||||||||| ||| ||||| |||||| |||||  || ||| ||||||||||||||  ||||| ||||| |||| ||||||||||||||||||||    
T  1644 ttagtgagggataacatgaaacccctctctaattatgttactaaattttgcgaccaaggaatttatgagggattttattttttccgtcactaattt 1549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 287 - 382
Target Start/End: Complemental strand, 19263 - 19168
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaattt 382  Q
    ||||||||||| ||| |||||||||||| |||||  ||  || |||||||||||||| ||| || ||||  |||| ||||||||||||| ||||||    
T  19263 ttagtgagggataacatgaaatccctctctaattatgtttctaaattttgcgaccaagaaaattatgagagattttattttttccgtcattaattt 19168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 287 - 382
Target Start/End: Original strand, 36316 - 36411
Alignment:
Q  287 ttagtgagggaaaacgtgaaatccctctttaattccgtcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaattt 382  Q
    ||||||||||| ||| ||||||| |||| |||||  || ||| ||||||| ||||||  ||||| ||| | |||| ||||||||||||||||||||    
T  36316 ttagtgagggataacatgaaatctctctctaattatgttactaaattttgtgaccaaggaatttatgatggattttattttttccgtcactaattt 36411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 324 - 411
Target Start/End: Original strand, 34197 - 34284
Alignment:
Q  324 tcactgaattttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagt 411  Q
    ||||| || ||| ||||||||||||||||||| ||||| ||||||||| ||| ||||||| |||  | ||||||||||| ||| ||||    
T  34197 tcactaaagtttacgaccaataaatttgtgagaaattttattttttccctcattaatttcgctccttgattttgcttttcctaatagt 34284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 333 - 411
Target Start/End: Original strand, 22150 - 22228
Alignment:
Q  333 tttgcgaccaataaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagtagt 411  Q
    ||||||| ||| |||||| |||| ||||| ||||||||| ||||||||||||||| || |||||| |||| ||| ||||    
T  22150 tttgcgatcaaaaaatttatgagaaattttattttttccctcactaatttccctccctgattttgtttttcctaatagt 22228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University