View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14404_low_32 (Length: 338)
Name: NF14404_low_32
Description: NF14404
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14404_low_32 |
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Alignment Details
Target: chr6 (Bit Score: 263; Significance: 1e-146; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 13 - 320
Target Start/End: Complemental strand, 719060 - 718743
Alignment:
| Q |
13 |
caaaggaagtaggaataataaatcgaccactggaataagaaaatattaactatgttcaactgctcaagactaattcaagtaatttttattaagtaaactt |
112 |
Q |
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| T |
719060 |
caaaagaagtaggaataataaatcgaccactggaataagaaaatattaactatgttcaactgctcaagactaattcaagtaatttttaataagtaaactt |
718961 |
T |
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| Q |
113 |
ttttggaacttaatcaaagatatattttatgaaatgactacttattctacctcaaacaaacaaatatatgttatgccgtagga----------gtcgtat |
202 |
Q |
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| T |
718960 |
ttttggaacttaatcaaagatatattttatgaaatgactacttattctacctcaaacaaacagatatatgttatgccgtaggaaactaaatctgtcgtat |
718861 |
T |
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| Q |
203 |
gaataaggaaaatttcaaacctacatgatatatttcactttgtggttcttaccaattttatacttcaaacaaatattaagttggtagagacaatacattg |
302 |
Q |
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| T |
718860 |
gaataaggaaaatttcaaacctacatgatatatttcactttgtggttcttaccaattttatacttcaaacaaatattaagttggtagagacaatacatta |
718761 |
T |
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| Q |
303 |
taatatatagtgatgtag |
320 |
Q |
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| T |
718760 |
taatatgtagtgatgtag |
718743 |
T |
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