View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14404_low_51 (Length: 267)
Name: NF14404_low_51
Description: NF14404
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14404_low_51 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 1 - 267
Target Start/End: Original strand, 10598315 - 10598581
Alignment:
| Q |
1 |
aatatctaaacatgatgcaaaagatattcaattagagcaaccacgggtcgaagaaaaagaagatgttaagtctagtgaggaatcagatggttgggtgaag |
100 |
Q |
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| T |
10598315 |
aatatctaaacatgatgcaaaagatactcaattagagcaaccacgggtcgaagaaaaagaagatgttaagtctagtgaggaatcagatggttgggtaaag |
10598414 |
T |
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| Q |
101 |
attgagttccagaaagaagatgatggacacatagcagatacaccaatagacacagaagaatcaggaattggaattgactctaagttaccacctcttgaaa |
200 |
Q |
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| T |
10598415 |
attgagttccagaaagaagatgatggacacatagcagatacaccaatagacacagaagaatcaggaattggaattgactctaagttaccacctcttgaaa |
10598514 |
T |
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| Q |
201 |
tttctgatcatgggaatcaagaagcaaatgatctagatatcataatgatgaatgaaaaggaatcaga |
267 |
Q |
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||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| |
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| T |
10598515 |
tttctgatcatgggaatcaagaagcgaatgatctagatatcataatgatgaatgaaaaggaaccaga |
10598581 |
T |
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