View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14405_high_7 (Length: 267)
Name: NF14405_high_7
Description: NF14405
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14405_high_7 |
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Alignment Details
Target: chr5 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 3 - 251
Target Start/End: Original strand, 10005010 - 10005258
Alignment:
| Q |
3 |
gatgtcgaagaatattcgagaagttatactagcttactgtataatatttgttgctacttgttagtgttgtgtgttaattccttaattttcattagaatag |
102 |
Q |
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| T |
10005010 |
gatgttgaagactattcgagaagttatactagcttactgtataatatttgttgctacttgttagtgttgtgtgttaattccttaattttcattagaatag |
10005109 |
T |
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| Q |
103 |
tccctcggatgcaatgactcgaatcttgagataaatcaaagaatctctggaaaataagtaaattataagaacataggtccactaatagtgtttcgcatac |
202 |
Q |
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| T |
10005110 |
tccctcggatgcaatgactcgaatcttgagataaatcaaagaatctctggaaaataagtaacttataagaacataggtccactaatagtgtttcgcatac |
10005209 |
T |
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| Q |
203 |
aaatgcagatcggactagatgctacaatgatccacaataaacctctaat |
251 |
Q |
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| T |
10005210 |
aaatgcagatcggactagatgctacaatgatccacaataaacctctaat |
10005258 |
T |
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