View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14405_low_15 (Length: 219)
Name: NF14405_low_15
Description: NF14405
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14405_low_15 |
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Alignment Details
Target: chr4 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 19 - 206
Target Start/End: Original strand, 39945650 - 39945837
Alignment:
| Q |
19 |
agaagcatgtttatgcatgacgacaagttctcctaaattgaaacgtgataacacatataagggcatggtttacatacaagacttattatcaagtaaacat |
118 |
Q |
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| T |
39945650 |
agaagcatgtttatgcatgacgacaagttctcctaaattgaaacgtgataacacatataagggcatggtttacatacaagacttattatcaagtaaacat |
39945749 |
T |
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| Q |
119 |
gaaataccagatcaattttgcatgtgcacaaacacaagtcacacacgcaaatgaaaacacataccgttcgtgcagaatgtcacaggtt |
206 |
Q |
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| T |
39945750 |
gaaataccagatcaattttgcatgtgcacaaacacaagtcacacacgcaaatgaaaacacataccgttcgtgcagaatgtcacaggtt |
39945837 |
T |
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