View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14405_low_16 (Length: 215)

Name: NF14405_low_16
Description: NF14405
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14405_low_16
NF14405_low_16
[»] chr4 (56 HSPs)
chr4 (41-133)||(530749-530841)
chr4 (41-132)||(1298912-1299003)
chr4 (41-131)||(18417658-18417748)
chr4 (41-133)||(55107523-55107615)
chr4 (41-132)||(4552785-4552876)
chr4 (41-132)||(20435220-20435311)
chr4 (41-132)||(52824239-52824330)
chr4 (41-132)||(27434610-27434701)
chr4 (41-131)||(42274572-42274663)
chr4 (41-133)||(24969621-24969716)
chr4 (41-131)||(4688327-4688418)
chr4 (41-132)||(13204377-13204468)
chr4 (41-132)||(28809927-28810018)
chr4 (41-133)||(23928647-23928739)
chr4 (41-132)||(4894969-4895063)
chr4 (41-132)||(32318800-32318891)
chr4 (41-132)||(35360677-35360767)
chr4 (41-105)||(24294494-24294558)
chr4 (41-132)||(24915874-24915969)
chr4 (41-128)||(16995634-16995721)
chr4 (41-102)||(21048785-21048845)
chr4 (79-132)||(24915794-24915847)
chr4 (79-131)||(32318721-32318773)
chr4 (41-129)||(56552064-56552152)
chr4 (41-128)||(3422509-3422596)
chr4 (79-133)||(27434728-27434782)
chr4 (41-132)||(52587395-52587481)
chr4 (79-132)||(530669-530722)
chr4 (79-132)||(1299030-1299083)
chr4 (79-132)||(42274492-42274545)
chr4 (79-131)||(4688248-4688300)
chr4 (79-130)||(24969543-24969594)
chr4 (79-134)||(55049398-55049453)
chr4 (41-134)||(2272365-2272457)
chr4 (79-132)||(13204495-13204548)
chr4 (79-132)||(18417775-18417828)
chr4 (79-132)||(21048705-21048758)
chr4 (77-130)||(37525059-37525112)
chr4 (79-132)||(43486200-43486253)
chr4 (79-132)||(55107642-55107695)
chr4 (73-133)||(28573946-28574006)
chr4 (79-130)||(36030941-36030992)
chr4 (49-128)||(47465072-47465151)
chr4 (79-133)||(20435139-20435193)
chr4 (79-132)||(3422429-3422482)
chr4 (79-132)||(4552903-4552956)
chr4 (79-132)||(23928568-23928620)
chr4 (47-133)||(19601026-19601112)
chr4 (79-128)||(9355557-9355606)
chr4 (41-94)||(23482001-23482054)
chr4 (79-132)||(28809846-28809899)
chr4 (74-132)||(11330106-11330164)
chr4 (74-128)||(42020203-42020257)
chr4 (79-120)||(2272484-2272525)
chr4 (79-127)||(24294585-24294636)
chr4 (66-110)||(8434628-8434672)
[»] chr3 (87 HSPs)
chr3 (41-132)||(21969237-21969328)
chr3 (41-132)||(21991673-21991764)
chr3 (41-132)||(25488421-25488512)
chr3 (41-132)||(25561011-25561102)
chr3 (41-132)||(32237474-32237565)
chr3 (41-132)||(45487799-45487890)
chr3 (41-132)||(3970571-3970662)
chr3 (41-132)||(10441338-10441429)
chr3 (41-132)||(12789606-12789697)
chr3 (41-132)||(26906454-26906545)
chr3 (41-132)||(36278836-36278927)
chr3 (41-132)||(36657513-36657604)
chr3 (41-132)||(36822840-36822931)
chr3 (41-136)||(43150476-43150571)
chr3 (41-131)||(10017115-10017205)
chr3 (41-130)||(12838079-12838168)
chr3 (41-134)||(13078243-13078336)
chr3 (41-132)||(4072353-4072445)
chr3 (41-129)||(45712983-45713071)
chr3 (41-128)||(8831744-8831832)
chr3 (41-132)||(39850424-39850516)
chr3 (41-131)||(5529892-5529983)
chr3 (41-131)||(10117516-10117607)
chr3 (41-131)||(10254569-10254660)
chr3 (41-132)||(36329260-36329351)
chr3 (41-132)||(38125259-38125350)
chr3 (41-130)||(43639161-43639251)
chr3 (41-132)||(25446251-25446341)
chr3 (41-133)||(55340373-55340466)
chr3 (41-132)||(404044-404136)
chr3 (41-125)||(44611461-44611545)
chr3 (45-128)||(1476635-1476718)
chr3 (41-128)||(37506206-37506293)
chr3 (41-132)||(46664176-46664267)
chr3 (41-132)||(13724067-13724159)
chr3 (41-103)||(22101193-22101256)
chr3 (65-132)||(35368549-35368616)
chr3 (41-132)||(44920726-44920816)
chr3 (41-133)||(50099431-50099525)
chr3 (41-103)||(22176137-22176200)
chr3 (74-132)||(36822760-36822818)
chr3 (79-132)||(21969157-21969210)
chr3 (79-132)||(21991593-21991646)
chr3 (75-132)||(36657433-36657490)
chr3 (79-132)||(45487917-45487970)
chr3 (79-132)||(50099552-50099605)
chr3 (41-132)||(157048-157140)
chr3 (41-133)||(26976922-26977014)
chr3 (79-133)||(13078162-13078216)
chr3 (79-133)||(22101283-22101337)
chr3 (30-104)||(37536898-37536972)
chr3 (74-132)||(39850344-39850402)
chr3 (79-132)||(3970491-3970544)
chr3 (79-132)||(4072273-4072326)
chr3 (79-132)||(10117629-10117682)
chr3 (79-132)||(22176227-22176280)
chr3 (65-134)||(32362859-32362928)
chr3 (79-131)||(10254687-10254739)
chr3 (45-133)||(42105467-42105555)
chr3 (79-130)||(32237396-32237447)
chr3 (74-128)||(5530005-5530059)
chr3 (75-132)||(10441258-10441315)
chr3 (79-132)||(25446368-25446420)
chr3 (79-144)||(25488329-25488394)
chr3 (79-132)||(26906572-26906625)
chr3 (79-132)||(36278756-36278809)
chr3 (79-131)||(8831859-8831911)
chr3 (84-131)||(10017232-10017279)
chr3 (79-128)||(297541-297590)
chr3 (79-132)||(25561129-25561182)
chr3 (79-132)||(26976842-26976895)
chr3 (79-132)||(35368851-35368904)
chr3 (91-132)||(46679289-46679330)
chr3 (41-101)||(26977721-26977781)
chr3 (85-131)||(13723989-13724035)
chr3 (87-128)||(1476555-1476596)
chr3 (79-132)||(12789724-12789777)
chr3 (79-132)||(26977808-26977861)
chr3 (83-132)||(43639081-43639130)
chr3 (41-104)||(297617-297678)
chr3 (49-109)||(19953869-19953929)
chr3 (79-130)||(12838195-12838246)
chr3 (98-133)||(45712902-45712937)
chr3 (81-132)||(55340293-55340344)
chr3 (41-70)||(35368795-35368824)
chr3 (79-128)||(42105387-42105436)
chr3 (79-132)||(44611382-44611434)
[»] chr1 (80 HSPs)
chr1 (41-132)||(5189469-5189560)
chr1 (41-132)||(3607809-3607900)
chr1 (41-132)||(19797061-19797152)
chr1 (41-132)||(42561375-42561466)
chr1 (41-132)||(50627131-50627222)
chr1 (41-133)||(23698582-23698674)
chr1 (41-132)||(2854612-2854703)
chr1 (41-131)||(9978131-9978222)
chr1 (41-132)||(19954991-19955082)
chr1 (41-132)||(48954294-48954385)
chr1 (41-131)||(14387095-14387185)
chr1 (41-132)||(15324626-15324718)
chr1 (41-132)||(47940650-47940742)
chr1 (41-132)||(27241004-27241095)
chr1 (41-133)||(27926330-27926424)
chr1 (41-134)||(27928377-27928471)
chr1 (41-132)||(4299472-4299566)
chr1 (41-132)||(2125150-2125241)
chr1 (41-130)||(50162618-50162708)
chr1 (41-133)||(6079383-6079475)
chr1 (41-132)||(1387780-1387869)
chr1 (41-132)||(51789677-51789766)
chr1 (41-132)||(9895253-9895344)
chr1 (41-131)||(51276775-51276865)
chr1 (41-134)||(40647114-40647209)
chr1 (64-132)||(49285078-49285146)
chr1 (58-132)||(36880289-36880363)
chr1 (41-133)||(21930379-21930472)
chr1 (41-110)||(26208446-26208516)
chr1 (41-131)||(48645094-48645183)
chr1 (41-133)||(28243952-28244049)
chr1 (42-132)||(16755224-16755315)
chr1 (41-128)||(22339064-22339151)
chr1 (74-132)||(36880624-36880682)
chr1 (79-132)||(27240924-27240977)
chr1 (41-134)||(27670147-27670234)
chr1 (75-132)||(50627245-50627302)
chr1 (79-133)||(27926250-27926304)
chr1 (74-131)||(1387891-1387948)
chr1 (74-131)||(19796982-19797039)
chr1 (79-132)||(19954911-19954964)
chr1 (80-133)||(25297966-25298019)
chr1 (79-132)||(47940570-47940623)
chr1 (41-101)||(29598354-29598414)
chr1 (41-103)||(957617-957680)
chr1 (41-128)||(28447953-28448040)
chr1 (79-133)||(9978050-9978104)
chr1 (79-132)||(2854532-2854585)
chr1 (79-132)||(23698502-23698555)
chr1 (79-132)||(40647236-40647289)
chr1 (79-132)||(42561295-42561348)
chr1 (79-132)||(48954214-48954267)
chr1 (79-132)||(51789597-51789650)
chr1 (79-135)||(2125067-2125123)
chr1 (79-130)||(5189587-5189638)
chr1 (79-130)||(14387017-14387068)
chr1 (79-130)||(15324745-15324796)
chr1 (41-128)||(35547780-35547867)
chr1 (79-132)||(362475-362528)
chr1 (79-132)||(21930496-21930549)
chr1 (79-132)||(26208543-26208596)
chr1 (79-128)||(27928302-27928351)
chr1 (79-132)||(29598455-29598508)
chr1 (41-128)||(5059642-5059727)
chr1 (41-128)||(16518380-16518468)
chr1 (79-134)||(27670261-27670317)
chr1 (41-105)||(2302429-2302494)
chr1 (85-134)||(25297920-25297968)
chr1 (79-132)||(51276695-51276748)
chr1 (79-131)||(3607730-3607782)
chr1 (41-96)||(39015273-39015328)
chr1 (79-134)||(50856319-50856374)
chr1 (98-132)||(14983626-14983660)
chr1 (41-91)||(18651330-18651380)
chr1 (79-128)||(957707-957756)
chr1 (79-128)||(16518302-16518351)
chr1 (79-128)||(49284298-49284347)
chr1 (79-132)||(50162538-50162591)
chr1 (41-113)||(19204113-19204185)
chr1 (41-113)||(19206523-19206595)
[»] chr7 (61 HSPs)
chr7 (41-134)||(34052277-34052370)
chr7 (41-132)||(10936550-10936641)
chr7 (41-132)||(38883221-38883312)
chr7 (41-131)||(35665696-35665786)
chr7 (41-132)||(24836020-24836111)
chr7 (41-132)||(30259146-30259237)
chr7 (41-132)||(30594693-30594784)
chr7 (41-132)||(31231694-31231787)
chr7 (41-130)||(35339358-35339447)
chr7 (41-132)||(25742511-25742602)
chr7 (41-132)||(20184318-20184410)
chr7 (45-132)||(48103368-48103455)
chr7 (41-132)||(38528490-38528583)
chr7 (41-133)||(3953122-3953214)
chr7 (41-132)||(9285794-9285885)
chr7 (41-132)||(9289861-9289952)
chr7 (41-133)||(12142191-12142284)
chr7 (41-132)||(45997588-45997679)
chr7 (41-134)||(39617921-39618014)
chr7 (41-132)||(37093768-37093859)
chr7 (41-132)||(47237505-47237599)
chr7 (41-134)||(29277836-29277928)
chr7 (41-101)||(40358146-40358206)
chr7 (79-134)||(24836138-24836193)
chr7 (65-128)||(38528394-38528457)
chr7 (74-132)||(35665633-35665691)
chr7 (75-133)||(38883335-38883393)
chr7 (79-132)||(35339278-35339331)
chr7 (41-102)||(24123835-24123898)
chr7 (80-132)||(33721827-33721879)
chr7 (79-134)||(31231612-31231667)
chr7 (79-133)||(20184237-20184291)
chr7 (79-132)||(34052397-34052450)
chr7 (79-133)||(10936469-10936523)
chr7 (74-136)||(24123751-24123813)
chr7 (79-132)||(3953042-3953095)
chr7 (79-128)||(30259070-30259119)
chr7 (44-132)||(39143795-39143877)
chr7 (41-133)||(31521605-31521692)
chr7 (87-134)||(17101700-17101747)
chr7 (79-134)||(45997506-45997561)
chr7 (51-113)||(7955000-7955062)
chr7 (79-129)||(30594811-30594861)
chr7 (87-132)||(17101654-17101699)
chr7 (47-128)||(40596771-40596852)
chr7 (79-134)||(9285712-9285767)
chr7 (79-134)||(9289779-9289834)
chr7 (79-132)||(12142311-12142364)
chr7 (41-133)||(22723308-22723401)
chr7 (79-132)||(25742435-25742488)
chr7 (42-91)||(28723567-28723616)
chr7 (41-101)||(33749674-33749735)
chr7 (79-132)||(39617841-39617894)
chr7 (79-132)||(47237433-47237485)
chr7 (79-132)||(48103483-48103536)
chr7 (79-131)||(39143713-39143765)
chr7 (84-131)||(11486865-11486912)
chr7 (53-95)||(4453188-4453230)
chr7 (79-132)||(40358233-40358289)
chr7 (79-128)||(10398437-10398486)
chr7 (79-119)||(31521538-31521578)
[»] chr2 (50 HSPs)
chr2 (41-133)||(24101912-24102004)
chr2 (41-133)||(34455884-34455976)
chr2 (41-132)||(16705733-16705824)
chr2 (41-132)||(3116876-3116967)
chr2 (41-132)||(9281427-9281518)
chr2 (41-132)||(34490456-34490547)
chr2 (41-132)||(45408625-45408716)
chr2 (41-132)||(1924060-1924152)
chr2 (41-133)||(12850622-12850714)
chr2 (41-132)||(20892884-20892976)
chr2 (41-133)||(22269721-22269813)
chr2 (41-132)||(23835876-23835968)
chr2 (41-127)||(2818671-2818757)
chr2 (41-132)||(9933649-9933740)
chr2 (41-132)||(6605738-6605826)
chr2 (41-132)||(42713857-42713949)
chr2 (41-131)||(7737065-7737156)
chr2 (41-132)||(27920573-27920663)
chr2 (41-131)||(9850838-9850923)
chr2 (41-133)||(29229443-29229535)
chr2 (41-133)||(29342743-29342835)
chr2 (74-132)||(34490569-34490627)
chr2 (133-194)||(26570279-26570340)
chr2 (74-132)||(24101832-24101890)
chr2 (41-133)||(7116369-7116461)
chr2 (41-130)||(43475946-43476037)
chr2 (79-133)||(45408743-45408797)
chr2 (79-132)||(1923980-1924033)
chr2 (79-132)||(7737183-7737236)
chr2 (41-120)||(17434760-17434840)
chr2 (79-134)||(2818784-2818839)
chr2 (77-132)||(22269838-22269893)
chr2 (79-133)||(16705851-16705905)
chr2 (79-132)||(3116994-3117047)
chr2 (79-132)||(43858552-43858605)
chr2 (79-131)||(10552999-10553051)
chr2 (41-128)||(22346454-22346542)
chr2 (79-134)||(9281345-9281400)
chr2 (73-132)||(20892997-20893055)
chr2 (79-132)||(9933570-9933622)
chr2 (79-132)||(27920690-27920743)
chr2 (79-132)||(43476064-43476117)
chr2 (85-132)||(6605858-6605905)
chr2 (41-128)||(39243063-39243150)
chr2 (80-133)||(8111692-8111745)
chr2 (75-128)||(37340970-37341023)
chr2 (79-132)||(42713777-42713830)
chr2 (79-134)||(12850540-12850595)
chr2 (81-132)||(29229361-29229414)
chr2 (81-132)||(29342661-29342714)
[»] scaffold0122 (2 HSPs)
scaffold0122 (41-132)||(45834-45925)
scaffold0122 (79-133)||(45952-46006)
[»] chr6 (39 HSPs)
chr6 (41-132)||(885385-885476)
chr6 (41-132)||(21380021-21380112)
chr6 (41-134)||(11687223-11687316)
chr6 (41-131)||(8091063-8091153)
chr6 (41-139)||(20501699-20501797)
chr6 (41-133)||(3368984-3369076)
chr6 (41-132)||(13439695-13439787)
chr6 (41-132)||(15546632-15546723)
chr6 (41-131)||(7808610-7808700)
chr6 (41-128)||(29609005-29609092)
chr6 (41-129)||(13172653-13172742)
chr6 (41-132)||(4890560-4890652)
chr6 (41-130)||(18998196-18998286)
chr6 (41-119)||(14393574-14393655)
chr6 (41-128)||(31764405-31764492)
chr6 (41-134)||(4238850-4238945)
chr6 (74-131)||(7808722-7808779)
chr6 (75-132)||(11687143-11687200)
chr6 (79-132)||(21379941-21379994)
chr6 (79-132)||(8091180-8091233)
chr6 (79-132)||(15546750-15546803)
chr6 (40-128)||(4076637-4076724)
chr6 (54-130)||(17279526-17279602)
chr6 (79-142)||(14393682-14393745)
chr6 (79-132)||(885503-885556)
chr6 (63-128)||(4179128-4179192)
chr6 (79-132)||(4890480-4890533)
chr6 (79-132)||(6433690-6433743)
chr6 (81-133)||(17367063-17367115)
chr6 (74-133)||(20501819-20501877)
chr6 (79-133)||(18998116-18998169)
chr6 (79-132)||(13172574-13172627)
chr6 (79-132)||(13439814-13439867)
chr6 (79-128)||(29609119-29609168)
chr6 (41-128)||(1681142-1681230)
chr6 (79-127)||(4238972-4239020)
chr6 (41-133)||(34522340-34522431)
chr6 (41-90)||(12831764-12831813)
chr6 (79-123)||(3369103-3369147)
[»] scaffold0107 (2 HSPs)
scaffold0107 (41-132)||(51063-51154)
scaffold0107 (79-132)||(51181-51234)
[»] chr8 (39 HSPs)
chr8 (41-132)||(29781039-29781130)
chr8 (41-131)||(37114239-37114329)
chr8 (41-132)||(8210323-8210414)
chr8 (41-134)||(24211358-24211451)
chr8 (41-132)||(38520018-38520109)
chr8 (41-132)||(38629474-38629565)
chr8 (41-131)||(33100725-33100815)
chr8 (44-132)||(15882200-15882289)
chr8 (41-132)||(12234466-12234558)
chr8 (41-132)||(4035741-4035832)
chr8 (41-132)||(23940884-23940976)
chr8 (41-132)||(17426708-17426801)
chr8 (33-132)||(11828668-11828774)
chr8 (41-101)||(40891044-40891104)
chr8 (41-128)||(38405142-38405230)
chr8 (74-133)||(33100644-33100703)
chr8 (79-132)||(15882319-15882372)
chr8 (44-103)||(10778686-10778745)
chr8 (79-130)||(40891131-40891182)
chr8 (41-95)||(4262056-4262110)
chr8 (41-107)||(40393748-40393814)
chr8 (79-132)||(17426628-17426681)
chr8 (79-128)||(24741827-24741876)
chr8 (79-132)||(38520136-38520189)
chr8 (79-132)||(38629592-38629645)
chr8 (41-128)||(35467175-35467261)
chr8 (79-128)||(14834676-14834725)
chr8 (79-132)||(23940804-23940857)
chr8 (79-132)||(24211278-24211331)
chr8 (79-128)||(35467288-35467337)
chr8 (65-131)||(5356228-5356294)
chr8 (79-133)||(29780958-29781012)
chr8 (79-132)||(12234585-12234638)
chr8 (47-128)||(14834755-14834838)
chr8 (41-133)||(24741903-24741995)
chr8 (73-133)||(38515616-38515676)
chr8 (79-119)||(4261989-4262029)
chr8 (65-97)||(25265966-25265998)
chr8 (41-128)||(33390652-33390737)
[»] chr5 (57 HSPs)
chr5 (41-132)||(1138559-1138650)
chr5 (41-132)||(15855843-15855934)
chr5 (41-132)||(35420692-35420783)
chr5 (41-130)||(24397325-24397415)
chr5 (41-128)||(16472959-16473046)
chr5 (41-132)||(21259810-21259901)
chr5 (41-132)||(4265982-4266073)
chr5 (41-133)||(13754371-13754463)
chr5 (41-105)||(21261970-21262034)
chr5 (41-132)||(20476431-20476522)
chr5 (41-132)||(43539108-43539198)
chr5 (41-132)||(33629425-33629518)
chr5 (45-128)||(8364714-8364797)
chr5 (41-132)||(12807912-12808002)
chr5 (49-133)||(1164883-1164968)
chr5 (41-133)||(37552388-37552474)
chr5 (41-133)||(37655232-37655317)
chr5 (41-97)||(1456102-1456158)
chr5 (41-101)||(12744857-12744917)
chr5 (75-134)||(15855957-15856016)
chr5 (49-128)||(35806939-35807018)
chr5 (75-133)||(16473069-16473127)
chr5 (79-132)||(20476549-20476602)
chr5 (75-132)||(35420612-35420669)
chr5 (79-134)||(21591211-21591266)
chr5 (79-134)||(21595328-21595383)
chr5 (41-128)||(18236470-18236559)
chr5 (79-132)||(33629345-33629398)
chr5 (41-132)||(19976261-19976353)
chr5 (79-139)||(32623208-32623268)
chr5 (42-101)||(12191423-12191482)
chr5 (41-128)||(42522900-42522987)
chr5 (79-132)||(1138677-1138730)
chr5 (77-130)||(2255578-2255631)
chr5 (41-126)||(2538402-2538487)
chr5 (79-132)||(4266100-4266153)
chr5 (79-132)||(13754291-13754344)
chr5 (78-134)||(2268170-2268226)
chr5 (41-95)||(735313-735367)
chr5 (79-129)||(12808029-12808079)
chr5 (79-132)||(43539225-43539278)
chr5 (84-128)||(780915-780959)
chr5 (89-132)||(17583367-17583410)
chr5 (85-132)||(21259730-21259777)
chr5 (79-133)||(2268723-2268777)
chr5 (41-82)||(2268672-2268713)
chr5 (79-128)||(10132372-10132421)
chr5 (80-129)||(25751570-25751619)
chr5 (28-128)||(35276359-35276460)
chr5 (79-132)||(37552308-37552361)
chr5 (84-132)||(29141805-29141853)
chr5 (57-128)||(10132286-10132357)
chr5 (78-117)||(20464014-20464053)
chr5 (79-129)||(12744944-12744994)
chr5 (79-120)||(2529099-2529140)
chr5 (79-128)||(4913267-4913316)
chr5 (84-128)||(29141863-29141907)
[»] scaffold0006 (2 HSPs)
scaffold0006 (41-132)||(72351-72441)
scaffold0006 (79-134)||(72286-72341)
[»] scaffold0653 (2 HSPs)
scaffold0653 (41-132)||(3473-3564)
scaffold0653 (79-134)||(3391-3446)
[»] scaffold0595 (2 HSPs)
scaffold0595 (53-132)||(5701-5780)
scaffold0595 (79-132)||(5823-5878)
[»] scaffold0188 (2 HSPs)
scaffold0188 (41-132)||(7086-7177)
scaffold0188 (79-132)||(7204-7257)
[»] scaffold0118 (2 HSPs)
scaffold0118 (41-132)||(14442-14533)
scaffold0118 (79-131)||(14560-14612)
[»] scaffold0137 (2 HSPs)
scaffold0137 (41-130)||(10118-10206)
scaffold0137 (79-132)||(10233-10286)
[»] scaffold0163 (2 HSPs)
scaffold0163 (41-132)||(2019-2111)
scaffold0163 (79-132)||(1939-1992)
[»] scaffold0086 (2 HSPs)
scaffold0086 (41-128)||(48130-48217)
scaffold0086 (79-131)||(48244-48296)
[»] scaffold0069 (1 HSPs)
scaffold0069 (73-132)||(26405-26464)
[»] scaffold0018 (1 HSPs)
scaffold0018 (79-122)||(138287-138330)
[»] scaffold0013 (1 HSPs)
scaffold0013 (28-95)||(94207-94276)


Alignment Details
Target: chr4 (Bit Score: 89; Significance: 4e-43; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 41 - 133
Target Start/End: Original strand, 530749 - 530841
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcca 133  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  530749 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcca 530841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 1299003 - 1298912
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  1299003 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctcc 1298912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 18417748 - 18417658
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctc 131  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  18417748 attttctcaaagtttgttatatccaaaaaatatatatttttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctc 18417658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 41 - 133
Target Start/End: Complemental strand, 55107615 - 55107523
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcca 133  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  55107615 attttctcaaagtttgttatatccaaataatatgtatttttagttaagaaccatatgaaaagcacataaggaattgtacctaagttttctcca 55107523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 4552876 - 4552785
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  4552876 attttctcaaagtttgttatatccaaaaaatatttatttttagttaaaaaccatatgaaaagcacttaaggaattgtacctaagttttctcc 4552785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 20435220 - 20435311
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  20435220 attttctcgaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaagaattgtacctaagttttctcc 20435311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 52824330 - 52824239
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  52824330 attttctcaaagtttattatatctaaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcc 52824239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 27434701 - 27434610
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| |||| |||||||| |||| |||||||||||||||||||||    
T  27434701 attttctcaaagtttgttatatccaaaaaaaatgtatttttagttaagaactatacaaaaagcacataagaaattgtacctaagttttctcc 27434610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 42274572 - 42274663
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctc 131  Q
    |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  42274572 attttctcaaagtttgttatatccaaaaaaatatatatttttagttaagaaccatacgaaaaacacctaaggaattgtacctaagttttctc 42274663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 41 - 133
Target Start/End: Original strand, 24969621 - 24969716
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaata---tgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcca 133  Q
    |||||||||||||||||||||||||||||| |   ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  24969621 attttctcaaagtttgttatatccaaaaaaaaaaatgtatttttagttaagaactatacgaaaagcacctaaggaattgtacctaagttttctcca 24969716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 4688327 - 4688418
Alignment:
Q  41 attttctcaaagtttgttatatccaaaa-aatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctc 131  Q
    |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||  |||||||||||||||||||||||||    
T  4688327 attttctcaaagtttgttatatccaaaaaaatatgtatttttaattaagaaccatacgaaaatcatctaaggaattgtacctaagttttctc 4688418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 13204468 - 13204377
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||| ||||||| |||||||||||||    
T  13204468 attttcacaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacaaaaagtacctaagtaattgtatctaagttttctcc 13204377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 28809927 - 28810018
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||  |||| |||||||||||||||||||||    
T  28809927 attttctcaaaatttgttatatccaaaaaatatgtatttctagttaagaaccataccaaaagcagctaagaaattgtacctaagttttctcc 28810018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 41 - 133
Target Start/End: Original strand, 23928647 - 23928739
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcca 133  Q
    ||||||||||| |||||||||||||||||| || |||||||||||||||| |||||| ||||||| ||||||||||||| |||||||||||||    
T  23928647 attttctcaaaatttgttatatccaaaaaaaatatatttttagttaagaatcatacgcaaagcacctaaggaattgtacataagttttctcca 23928739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 4895063 - 4894969
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaa---agcacttaaggaattgtacctaagttttctcc 132  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| |||| |||   || || ||||||||||||||||||||||||||    
T  4895063 attttctcaaagtttgttatattcaaaaaatatgtatttttagttaagaactatacaaaaaacagtacataaggaattgtacctaagttttctcc 4894969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 32318800 - 32318891
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||| |||| ||||||||| ||| ||||||||| ||| ||||||||    
T  32318800 attttctcaaagtttgttatatccaaaaaatatatatttttaattaagaatcatatgaaaagcacctaaagaattgtacttaaattttctcc 32318891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 35360767 - 35360677
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  || |||  ||||||| |||||||||||||    
T  35360767 attttctcaaagtttgttatatctaaaaaatatgtatttttagttaagaaccatacgaaaaatacctaataaattgta-ctaagttttctcc 35360677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 41 - 105
Target Start/End: Complemental strand, 24294558 - 24294494
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcac 105  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||    
T  24294558 attttctcaaagtttgttatatcaaaaaaatatgtatttttaattaagaatcatacgaaaagcac 24294494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 24915874 - 24915969
Alignment:
Q  41 attttctcaaagtttgttatatccaaaa-----aatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||||||||     |||||||||||||||||||||||||| | ||||| || |||| |||||||||||||||||||||    
T  24915874 attttctcaaagtttgttatatccaaaaaaaataatatgtatttttagttaagaaccat-caaaaagtacataagaaattgtacctaagttttctcc 24915969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 41 - 128
Target Start/End: Original strand, 16995634 - 16995721
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagtttt 128  Q
    ||||| ||| ||||||||||||| |||||| ||||||| |||||||| ||||||||||||| ||||||| |||||||| |||||||||    
T  16995634 attttttcagagtttgttatatctaaaaaagatgtattgttagttaaaaaccatacgaaaatcacttaaagaattgtatctaagtttt 16995721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 41 - 102
Target Start/End: Original strand, 21048785 - 21048845
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaag 102  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  21048785 attttctcgaagtttgttatatc-aaaaaatatgtatttttagttaagaaccatacgaaaag 21048845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 24915847 - 24915794
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  24915847 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcc 24915794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 79 - 131
Target Start/End: Complemental strand, 32318773 - 32318721
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctc 131  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  32318773 tttagttaagaaccatacgaaaagcacataaggaattgtacctaagttttctc 32318721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 41 - 129
Target Start/End: Complemental strand, 56552152 - 56552064
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttc 129  Q
    ||||||||||||||||||||| ||||  ||  ||||||||||||| |||||||||| |||||||| ||||||| ||||||| |||||||    
T  56552152 attttctcaaagtttgttataaccaaggaaagtgtatttttagttgagaaccatacaaaaagcacctaaggaaatgtacctgagttttc 56552064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 41 - 128
Target Start/End: Original strand, 3422509 - 3422596
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagtttt 128  Q
    ||||||||||||||| || ||||  ||||| || ||||||||||||| ||||||||||||| ||| ||| ||||||||||||||||||    
T  3422509 attttctcaaagtttattgtatcgtaaaaagatatatttttagttaaaaaccatacgaaaaacacctaaagaattgtacctaagtttt 3422596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 79 - 133
Target Start/End: Original strand, 27434728 - 27434782
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcca 133  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  27434728 tttagttaagaaccatacgaaaagcacctaaggaattgtacttaagttttctcca 27434782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 52587395 - 52587481
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||| ||||| ||| |||||  |||||||||||||||||||||||| |||| ||   ||||||||||||||||    
T  52587395 attttctcaaagtttgttatatcaaaaaattatatattt--agttaagaaccatacgaaaagcacctaagtaa---tacctaagttttctcc 52587481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 530722 - 530669
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  530722 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctcc 530669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 1299030 - 1299083
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  1299030 tttagttaagaaccataagaaaagcacctaaggaattgtacctaagttttctcc 1299083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 42274545 - 42274492
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  42274545 tttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttctcc 42274492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 79 - 131
Target Start/End: Complemental strand, 4688300 - 4688248
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctc 131  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  4688300 tttagttaagaaccatacgaaaagcacctaagaaattgtacctaagttttctc 4688248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 79 - 130
Target Start/End: Complemental strand, 24969594 - 24969543
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttct 130  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  24969594 tttagttaagaaccatacgaaaagcacctaaagaattgtacctaagttttct 24969543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 79 - 134
Target Start/End: Complemental strand, 55049453 - 55049398
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctccaa 134  Q
    ||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  55049453 tttagttaagaactatacgaaaagcacctaaggaattgtacataagttttctccaa 55049398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 41 - 134
Target Start/End: Complemental strand, 2272457 - 2272365
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctccaa 134  Q
    ||||| |||||||||||| |||||||||||  |||||||| ||||||||||||||  |||||||| |||  ||||||| ||||||||| |||||    
T  2272457 attttatcaaagtttgttctatccaaaaaaattgtatttt-agttaagaaccatataaaaagcacctaaaaaattgtaactaagttttgtccaa 2272365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 13204495 - 13204548
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||| |||||||||||||| || ||||||||||||||||||||||||||    
T  13204495 tttagttaaaaaccatacgaaaagtacataaggaattgtacctaagttttctcc 13204548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 18417775 - 18417828
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||| ||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  18417775 tttaattaagaaccatacaaaaagcacctaaggaattgtacctaagttttctcc 18417828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 21048758 - 21048705
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||||||  ||| ||||||||||||||||||||||    
T  21048758 tttagttaagaaccatacgaaaagcatctaacgaattgtacctaagttttctcc 21048705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 77 - 130
Target Start/End: Original strand, 37525059 - 37525112
Alignment:
Q  77 tttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttct 130  Q
    ||||||||||||||||| ||||||||||| ||| ||||||||||||||||||||    
T  37525059 tttttagttaagaaccacacgaaaagcacctaaagaattgtacctaagttttct 37525112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 43486253 - 43486200
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||| |||||| || ||||||||||||||||||||||||||    
T  43486253 tttagttaagaaccataggaaaagtacctaaggaattgtacctaagttttctcc 43486200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 55107642 - 55107695
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||||| ||||||||||| |||||||| ||||||||||||||||||||||||||    
T  55107642 tttagtaaagaaccatacaaaaagcacctaaggaattgtacctaagttttctcc 55107695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 73 - 133
Target Start/End: Complemental strand, 28574006 - 28573946
Alignment:
Q  73 tgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcca 133  Q
    |||||||| || |||||||||| |||||||||| |||| ||||||||||||||||||||||    
T  28574006 tgtattttaaggtaagaaccatgcgaaaagcacctaagtaattgtacctaagttttctcca 28573946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 79 - 130
Target Start/End: Complemental strand, 36030992 - 36030941
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttct 130  Q
    |||||||||||| |||||||||||||| ||||||||||||||||| ||||||    
T  36030992 tttagttaagaaacatacgaaaagcacgtaaggaattgtacctaacttttct 36030941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 49 - 128
Target Start/End: Original strand, 47465072 - 47465151
Alignment:
Q  49 aaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagtttt 128  Q
    |||||||||||| || ||| || || ||||||||||||| || |||| ||||||||| ||| ||||||||||||||||||    
T  47465072 aaagtttgttatctctaaacaagatatatttttagttaaaaatcatatgaaaagcacctaaagaattgtacctaagtttt 47465151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 79 - 133
Target Start/End: Complemental strand, 20435193 - 20435139
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcca 133  Q
    ||||||||||||||||||||||||||  ||||||||||||  |||||||||||||    
T  20435193 tttagttaagaaccatacgaaaagcatctaaggaattgtatataagttttctcca 20435139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 3422482 - 3422429
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||| |||||||| ||||||||||||| |||| |||||||||||||||||||||    
T  3422482 tttaattaagaactatacgaaaagcacctaagaaattgtacctaagttttctcc 3422429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 4552903 - 4552956
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||  ||||||  ||||||||||||||||||||||||||    
T  4552903 tttagttaagaaccatacagaaagcatataaggaattgtacctaagttttctcc 4552956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 23928620 - 23928568
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||||||||||| |||||||||| |||| |||||||||||||||||||||||||    
T  23928620 tttagttaagaatcatacgaaaaacact-aaggaattgtacctaagttttctcc 23928568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 47 - 133
Target Start/End: Original strand, 19601026 - 19601112
Alignment:
Q  47 tcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcca 133  Q
    |||||||||||||| |  ||||||| |||||||||| ||||||| ||||| ||| ||||||||   ||| |||||||||||| ||||    
T  19601026 tcaaagtttgttatttaaaaaaaatgtgtatttttaattaagaatcatacaaaatgcacttaaaatattatacctaagttttatcca 19601112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 128
Target Start/End: Complemental strand, 9355606 - 9355557
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagtttt 128  Q
    ||||||||||||||||| ||||||||| |||||||||||||  |||||||    
T  9355606 tttagttaagaaccatatgaaaagcacctaaggaattgtacggaagtttt 9355557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 94
Target Start/End: Original strand, 23482001 - 23482054
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccat 94  Q
    ||||||||||| ||||||||||  |||||| |||||| ||||||||||||||||    
T  23482001 attttctcaaaatttgttatatataaaaaagatgtatatttagttaagaaccat 23482054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 28809899 - 28809846
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||| ||| |||| |||||||| |||| |||||||||||||||||||||    
T  28809899 tttagttaaaaacaataccaaaagcacctaagaaattgtacctaagttttctcc 28809846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 132
Target Start/End: Complemental strand, 11330164 - 11330106
Alignment:
Q  74 gtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||| ||||||||| |||| ||||||||  |||| ||||||| |||||||||||||    
T  11330164 gtattttcagttaagaatcatatgaaaagcatctaagaaattgtatctaagttttctcc 11330106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 128
Target Start/End: Original strand, 42020203 - 42020257
Alignment:
Q  74 gtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagtttt 128  Q
    ||||||||||||||||||||||| ||||| |  ||  ||||||||||||||||||    
T  42020203 gtatttttagttaagaaccatacaaaaagtatctagagaattgtacctaagtttt 42020257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 79 - 120
Target Start/End: Original strand, 2272484 - 2272525
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacc 120  Q
    ||||| ||||||||||||||||||||| ||| ||||||||||    
T  2272484 tttagctaagaaccatacgaaaagcacataatgaattgtacc 2272525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 79 - 127
Target Start/End: Original strand, 24294585 - 24294636
Alignment:
Q  79 tttagttaagaaccatacgaaa---agcacttaaggaattgtacctaagttt 127  Q
    ||||||||||||||||||||||   | ||| |||||||||||||||||||||    
T  24294585 tttagttaagaaccatacgaaaaacaccacctaaggaattgtacctaagttt 24294636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 110
Target Start/End: Original strand, 8434628 - 8434672
Alignment:
Q  66 aaaaatatgtatttttagttaagaaccatacgaaaagcacttaag 110  Q
    ||||| || |||||||| |||||||| ||||||||||||||||||    
T  8434628 aaaaaaatctatttttaattaagaactatacgaaaagcacttaag 8434672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 88; Significance: 2e-42; HSPs: 87)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 21969237 - 21969328
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  21969237 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcc 21969328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 21991673 - 21991764
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  21991673 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcc 21991764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 25488421 - 25488512
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  25488421 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctcc 25488512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 25561102 - 25561011
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  25561102 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctcc 25561011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 32237474 - 32237565
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  32237474 attttctcaaagtttgttatatccaaaaaatatgtatttttaattaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcc 32237565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 45487890 - 45487799
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  45487890 attttctcaatgtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcc 45487799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 3970571 - 3970662
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| |||||||||||||||||||||    
T  3970571 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagtacctaagaaattgtacctaagttttctcc 3970662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 10441338 - 10441429
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||    
T  10441338 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccgtaccaaaagcacctaaggaattgtacctaagttttctcc 10441429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 12789697 - 12789606
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  12789697 attttttcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaaacacctaaggaattgtacctaagttttctcc 12789606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 26906545 - 26906454
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  26906545 attttctcaaagtttgttatatccaaaaaatatatatttttagttaagaaccatacgaaaaggacctaaggaattgtacctaagttttctcc 26906454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 36278836 - 36278927
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  36278836 attttctcaaagtttgttatatccaaaaaatatatatttttagttaagaaccatacgaaaaggacctaaggaattgtacctaagttttctcc 36278927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 36657513 - 36657604
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  36657513 attttctcaaagtttgttatatcaaaaaaatatgtatttttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttctcc 36657604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 36822840 - 36822931
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||||||||||||    
T  36822840 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaaaaattgtacctaagttttctcc 36822931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 41 - 136
Target Start/End: Complemental strand, 43150571 - 43150476
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctccaaca 136  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||| |||||||||||||||||||    
T  43150571 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaaaaaccatacgaaaagcacctgaggaattgcacctaagttttctccaaca 43150476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 10017205 - 10017115
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctc 131  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  10017205 attttttcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatatgaaaagcacctaaggaattgtacctaagttttctc 10017115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 41 - 130
Target Start/End: Complemental strand, 12838168 - 12838079
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttct 130  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||    
T  12838168 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacaaaaagcacctaaggaattgtacataagttttct 12838079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 41 - 134
Target Start/End: Original strand, 13078243 - 13078336
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctccaa 134  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || |||| |||||||||||||||||||||||    
T  13078243 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaatcatacgaaaagtacctaagaaattgtacctaagttttctccaa 13078336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 4072353 - 4072445
Alignment:
Q  41 attttctcaaagtttgttatatccaaaa-aatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  4072353 attttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaaccatacgaaaaacacctaaggaattgtacctaagttttctcc 4072445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 41 - 129
Target Start/End: Original strand, 45712983 - 45713071
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttc 129  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  45712983 attttatcaaagtttgttatatccaaaaaatatgtatttttagtttagaaccatacgaaaagcacctaaggaattgtacctaagttttc 45713071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 41 - 128
Target Start/End: Complemental strand, 8831832 - 8831744
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagtttt 128  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  8831832 attttctcaaagtttgttatatccaaaaaaatatgtatttttagtttagaaccatacgaaaagcacctaaggaattgtacctaagtttt 8831744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 39850424 - 39850516
Alignment:
Q  41 attttctca-aagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  39850424 attttctcacaagtttgttatatccaaaaaatatatatttttagttaagaatcatacgaaaagcacctaaggaattgtacctaagttttctcc 39850516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 5529983 - 5529892
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctc 131  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  5529983 attttctcaaagtttgatatatccaaaaaaatatgtatttttagttaagaaccatacgaaaagcacctaagaaattgtacctaagttttctc 5529892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 10117607 - 10117516
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctc 131  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||||| |||||||||||||||||    
T  10117607 attttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaaccatatgaaaagcacctaaggaactgtacctaagttttctc 10117516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 10254660 - 10254569
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctc 131  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  10254660 attttttcaaagtttgttatatccaaaaaaatatgtatttttagttaagaaccatatgaaaagcacctaaggaattgtacctaagttttctc 10254569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 36329260 - 36329351
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||  ||||||||    
T  36329260 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaagaattgtagctaccttttctcc 36329351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 38125259 - 38125350
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||||    
T  38125259 attttcttaaagtttgttatatacaaaaaatatgtatttttagttaagaaccatacgaaaaacacctaatgaattgtacctaagttttctcc 38125350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 41 - 130
Target Start/End: Original strand, 43639161 - 43639251
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttct 130  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  43639161 attttctcaaagtttgttatatccaaaaaaatatatatttttagttaagaatcatacgaaaagcacctaaggaattgtacctaagttttct 43639251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 25446341 - 25446251
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  25446341 attttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaaccatacgaaaagcac-taaggaattgta-ctaagttttctcc 25446251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 41 - 133
Target Start/End: Original strand, 55340373 - 55340466
Alignment:
Q  41 attttctcaaagtttgttatatccaaaa-aatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcca 133  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||  || |||||||||||| ||||||||||||||    
T  55340373 attttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaaccatatgaaaaatacctaaggaattgtatctaagttttctcca 55340466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 404136 - 404044
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||||||||||||||||||||||||||||| ||| ||||||||||||| || |||||||||||||| |||| |||||||| ||||||||||||    
T  404136 attttctcaaagtttgttatatccaaaaaaatatttatttttagttaaaaatcatacgaaaagcacctaagaaattgtacgtaagttttctcc 404044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 41 - 125
Target Start/End: Original strand, 44611461 - 44611545
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagt 125  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||| |||| ||| |||||||||||||||||||    
T  44611461 attttctcaaagtttgttatatcaaaaaaatatatatttttagttaaaaaccatacaaaaaacacctaaggaattgtacctaagt 44611545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 45 - 128
Target Start/End: Original strand, 1476635 - 1476718
Alignment:
Q  45 tctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagtttt 128  Q
    |||||||||||||||| || ||||||  ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  1476635 tctcaaagtttgttatctctaaaaaaattgtatttttagttaagaaccatatgaaaagcacctaaggaattgtacctaagtttt 1476718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 41 - 128
Target Start/End: Original strand, 37506206 - 37506293
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagtttt 128  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||| ||| ||| ||||||||| ||||||||    
T  37506206 attttctcaaagtttgttatctccaaaaaaaatgtatttttagttaagaaccacacgaaaaacacctaaagaattgtacataagtttt 37506293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 46664267 - 46664176
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||  || |||| |||||||||||| ||||||||    
T  46664267 attttctcaaagtttgttatattaaaaaaatatgtatttttagttaagaactatacgaaaaatacctaagaaattgtacctaaattttctcc 46664176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 13724067 - 13724159
Alignment:
Q  41 attttctcaaagtttgttatatccaaaa-aatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| ||  ||||||||| ||  |||||||||||||||||| |||||||    
T  13724067 attttctcaaagtttgttatatccaaaaaaatatgtatttttagttaaaaattatacgaaaaacatctaaggaattgtacctaagatttctcc 13724159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 41 - 103
Target Start/End: Complemental strand, 22101256 - 22101193
Alignment:
Q  41 attttctcaaagtttgttatatccaa-aaaatatgtatttttagttaagaaccatacgaaaagc 103  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  22101256 attttctcaaagtttgttatatccaacaaaatatgtatttttagttaagaaccatacgaaaagc 22101193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 65 - 132
Target Start/End: Complemental strand, 35368616 - 35368549
Alignment:
Q  65 aaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  35368616 aaaaaaaaagtatttttagttaagaaccatacgaaaagcacataaggaattgtacctaagttttctcc 35368549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 44920726 - 44920816
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||  |||| ||  |||| |||||||||||||||||||||    
T  44920726 attttctcaaagtttattatatccaaaaaatatgtatttttagttaagaactata-aaaaaacatataagaaattgtacctaagttttctcc 44920816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 41 - 133
Target Start/End: Complemental strand, 50099525 - 50099431
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaa--tatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcca 133  Q
    ||||||||||||||||||||||||||||||  |||||||||||| |||| ||||||||||||||||| ||| ||||||||| | | |||||||||    
T  50099525 attttctcaaagtttgttatatccaaaaaaaatatgtatttttaattaaaaaccatacgaaaagcacctaacgaattgtacatgaattttctcca 50099431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 41 - 103
Target Start/End: Complemental strand, 22176200 - 22176137
Alignment:
Q  41 attttctcaaagtttgttatatccaa-aaaatatgtatttttagttaagaaccatacgaaaagc 103  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  22176200 attttctcaaagtttgtaatatccaacaaaatatgtatttttagttaagaaccatacgaaaagc 22176137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 74 - 132
Target Start/End: Complemental strand, 36822818 - 36822760
Alignment:
Q  74 gtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  36822818 gtatttttagttaagaaccatacgaaaagcagctaaggaattgtacctaagttttctcc 36822760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 21969210 - 21969157
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  21969210 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcc 21969157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 21991646 - 21991593
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  21991646 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcc 21991593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 75 - 132
Target Start/End: Complemental strand, 36657490 - 36657433
Alignment:
Q  75 tatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  36657490 tatttttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttctcc 36657433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 45487917 - 45487970
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  45487917 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcc 45487970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 50099552 - 50099605
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  50099552 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcc 50099605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 157048 - 157140
Alignment:
Q  41 attttctcaaagtttgttatatccaaaa-aatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||  |||| ||||||||||||||| ||||||| |||| |||||||| |||| |||||||  ||||||||||||    
T  157048 attttctcaaagtttgttatataaaaaaaaatatgtatttttagctaagaactataccaaaagcacctaagaaattgtatataagttttctcc 157140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 41 - 133
Target Start/End: Original strand, 26976922 - 26977014
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcca 133  Q
    ||||||||||||||| || ||||  ||||| || ||||||||||||| ||||||||||||| ||| ||| |||||||||||||||||| ||||    
T  26976922 attttctcaaagtttattgtatcgtaaaaagatatatttttagttaaaaaccatacgaaaaacacctaaagaattgtacctaagttttgtcca 26977014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 79 - 133
Target Start/End: Complemental strand, 13078216 - 13078162
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcca 133  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  13078216 tttagttaagaaccatacgaaaagcacctaaggaattgcacctaagttttctcca 13078162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 79 - 133
Target Start/End: Original strand, 22101283 - 22101337
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcca 133  Q
    ||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  22101283 tttagttaagaaccatacgaaaagctcataaggaattgtacctaagttttctcca 22101337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 30 - 104
Target Start/End: Complemental strand, 37536972 - 37536898
Alignment:
Q  30 tctaatccagtattttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagca 104  Q
    |||||||||  ||||||||||||||||||||| | |||||||||||| |||||| ||||||||||| ||||||||    
T  37536972 tctaatccataattttctcaaagtttgttataacaaaaaaatatgtaattttagataagaaccatatgaaaagca 37536898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 74 - 132
Target Start/End: Complemental strand, 39850402 - 39850344
Alignment:
Q  74 gtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||    
T  39850402 gtatttttagttaagaaccatacgaaaaacacctaaggaatagtacctaagttttctcc 39850344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 3970544 - 3970491
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  3970544 tttagttaagaaccatacgaaaagcacctaaggaattgcacctaagttttctcc 3970491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 4072326 - 4072273
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  4072326 tttagttaagaaccatacgaaaagcacctaagaaattgtacctaagttttctcc 4072273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 10117629 - 10117682
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  10117629 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaaattttctcc 10117682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 22176227 - 22176280
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  22176227 tttagttaagaaccatacaaaaagcacataaggaattgtacctaagttttctcc 22176280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 65 - 134
Target Start/End: Complemental strand, 32362928 - 32362859
Alignment:
Q  65 aaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctccaa 134  Q
    |||| |||||||||||||||||||||||||||||||| ||| ||| ||||||||  ||||||||||||||    
T  32362928 aaaatatatgtatttttagttaagaaccatacgaaaaacacctaaagaattgtagttaagttttctccaa 32362859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 79 - 131
Target Start/End: Original strand, 10254687 - 10254739
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctc 131  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  10254687 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaaattttctc 10254739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 45 - 133
Target Start/End: Original strand, 42105467 - 42105555
Alignment:
Q  45 tctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcca 133  Q
    |||||||||||||||| || ||||||  |||||||||||||||||||||||| |||| ||| || | |||||||| |||||||| ||||    
T  42105467 tctcaaagtttgttatctctaaaaaaattgtatttttagttaagaaccatacaaaaaacacctacgaaattgtacttaagttttgtcca 42105555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 79 - 130
Target Start/End: Complemental strand, 32237447 - 32237396
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttct 130  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  32237447 tttagttaagaaccatacgaaaaacacctaaggaattgtacctaagttttct 32237396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 74 - 128
Target Start/End: Original strand, 5530005 - 5530059
Alignment:
Q  74 gtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagtttt 128  Q
    |||||||||||||| |||||||||||||||||||||| |||||||||||| ||||    
T  5530005 gtatttttagttaataaccatacgaaaagcacttaagaaattgtacctaaatttt 5530059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 75 - 132
Target Start/End: Complemental strand, 10441315 - 10441258
Alignment:
Q  75 tatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||||||||||||||| ||||| |||||||| ||||||||||||| ||||||||||||    
T  10441315 tatttttagttaagaatcataccaaaagcacctaaggaattgtacttaagttttctcc 10441258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 25446368 - 25446420
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  25446368 tttagttaagaaccatacgaaaagcacctaaggaattgta-ctaagttttctcc 25446420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 79 - 144
Target Start/End: Complemental strand, 25488394 - 25488329
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctccaacataatatat 144  Q
    ||||||||||||| ||||||||||||| ||||||||||||| |||| ||||||||  |||||||||    
T  25488394 tttagttaagaactatacgaaaagcacctaaggaattgtacttaagatttctccattataatatat 25488329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 26906572 - 26906625
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||||||||||||||||||||||| |  ||||||||||||||||||||||||||    
T  26906572 tttagttaagaaccatacgaaaagtatctaaggaattgtacctaagttttctcc 26906625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 36278809 - 36278756
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||||||||||||||||||||||| |  ||||||||||||||||||||||||||    
T  36278809 tttagttaagaaccatacgaaaagtatctaaggaattgtacctaagttttctcc 36278756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 79 - 131
Target Start/End: Original strand, 8831859 - 8831911
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctc 131  Q
    ||||||||||||||||||||||||||| |||  ||||||||||||||||||||    
T  8831859 tttagttaagaaccatacgaaaagcacctaaaaaattgtacctaagttttctc 8831911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 10017232 - 10017279
Alignment:
Q  84 ttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctc 131  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||||    
T  10017232 ttaagaaccatacgaaaagcacctaaggaattgtacctaaattttctc 10017279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 128
Target Start/End: Complemental strand, 297590 - 297541
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagtttt 128  Q
    ||||| |||||||||||||||||||||  |||||||||||||||||||||    
T  297590 tttagctaagaaccatacgaaaagcaccaaaggaattgtacctaagtttt 297541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 25561129 - 25561182
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||| ||||||||||||| ||||||||||||| |||| |||||||    
T  25561129 tttagttaagaactatacgaaaagcacctaaggaattgtacttaagatttctcc 25561182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 26976895 - 26976842
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||| |||||||| ||||||||||||| |||| |||||||||||||||||||||    
T  26976895 tttaattaagaactatacgaaaagcacctaagaaattgtacctaagttttctcc 26976842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 35368851 - 35368904
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||| ||||||||||||| ||| |||| |||||||||||||||||||||    
T  35368851 tttagttaaaaaccatacgaaaaacacataagaaattgtacctaagttttctcc 35368904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 132
Target Start/End: Complemental strand, 46679330 - 46679289
Alignment:
Q  91 ccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  46679330 ccatacgcaaagcacttaaggaattgtacctaagttttctcc 46679289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 41 - 101
Target Start/End: Complemental strand, 26977781 - 26977721
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaa 101  Q
    ||||||||||||||| || ||||  ||||| |||||||||||||||| |||||||||||||    
T  26977781 attttctcaaagtttattgtatcataaaaagatgtatttttagttaaaaaccatacgaaaa 26977721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 85 - 131
Target Start/End: Complemental strand, 13724035 - 13723989
Alignment:
Q  85 taagaaccatacgaaaagcacttaaggaattgtacctaagttttctc 131  Q
    |||||||||||| |||||||| |||| ||||||||||||||||||||    
T  13724035 taagaaccatacaaaaagcacctaagaaattgtacctaagttttctc 13723989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 128
Target Start/End: Complemental strand, 1476596 - 1476555
Alignment:
Q  87 agaaccatacgaaaagcacttaaggaattgtacctaagtttt 128  Q
    |||||||||| |||||||| ||||||||||||||||||||||    
T  1476596 agaaccataccaaaagcacctaaggaattgtacctaagtttt 1476555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 12789724 - 12789777
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||| ||||||||||||| |||||||| ||||||||| |||| |||||||||||    
T  12789724 tttaattaagaaccatacaaaaagcacctaaggaattctaccaaagttttctcc 12789777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 26977808 - 26977861
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||| |||||| |  |||| |||||||||||||||||||||    
T  26977808 tttagttaagaaccatatgaaaagtatctaagaaattgtacctaagttttctcc 26977861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 132
Target Start/End: Complemental strand, 43639130 - 43639081
Alignment:
Q  83 gttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||||||| |||||||||||||| ||||||||| || |||||||||||||    
T  43639130 gttaagaatcatacgaaaagcacctaaggaattataactaagttttctcc 43639081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 104
Target Start/End: Original strand, 297617 - 297678
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagca 104  Q
    ||||||||| |||||||||||| |||||| ||||  |||||||||||||| |||| ||||||||    
T  297617 attttctcatagtttgttatattcaaaaattatg--tttttagttaagaatcatatgaaaagca 297678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 109
Target Start/End: Complemental strand, 19953929 - 19953869
Alignment:
Q  49 aaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaa 109  Q
    ||||||||||||| | ||||||| || ||||||| ||| |||||||| |||||||||||||    
T  19953929 aaagtttgttataacaaaaaaatgtgcatttttaattatgaaccatatgaaaagcacttaa 19953869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 130
Target Start/End: Original strand, 12838195 - 12838246
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttct 130  Q
    ||||||||| ||||||||||||| ||| ||| ||||||||| ||||||||||    
T  12838195 tttagttaaaaaccatacgaaaaacacctaaagaattgtacataagttttct 12838246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 133
Target Start/End: Complemental strand, 45712937 - 45712902
Alignment:
Q  98 aaaagcacttaaggaattgtacctaagttttctcca 133  Q
    |||||||| |||||||||||||||||||||||||||    
T  45712937 aaaagcacctaaggaattgtacctaagttttctcca 45712902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 132
Target Start/End: Complemental strand, 55340344 - 55340293
Alignment:
Q  81 tagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||||||||| |||||||||| ||| |||| |||||||||||| ||||||||    
T  55340344 tagttaagaatcatacgaaaaacacataagaaattgtacctaaattttctcc 55340293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 41 - 70
Target Start/End: Complemental strand, 35368824 - 35368795
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaa 70  Q
    ||||||||||||||||||||||||||||||    
T  35368824 attttctcaaagtttgttatatccaaaaaa 35368795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 79 - 128
Target Start/End: Complemental strand, 42105436 - 42105387
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagtttt 128  Q
    ||||||||||||||||| |||||| || || | |||||||||||||||||    
T  42105436 tttagttaagaaccataagaaaagtacctatgaaattgtacctaagtttt 42105387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 44611434 - 44611382
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||| |||| ||||| || |||||||||||| |||||||||||||    
T  44611434 tttagttaagaactatacaaaaagtacctaaggaattgta-ctaagttttctcc 44611382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 88; Significance: 2e-42; HSPs: 80)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 5189560 - 5189469
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  5189560 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcc 5189469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 3607809 - 3607900
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  3607809 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacctaagaaattgtacctaagttttctcc 3607900  T

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Target: chr1; HSP #3
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 19797061 - 19797152
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  19797061 attttttcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcc 19797152  T

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Target: chr1; HSP #4
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 42561375 - 42561466
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  42561375 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctcc 42561466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 50627222 - 50627131
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  50627222 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttctcc 50627131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 41 - 133
Target Start/End: Original strand, 23698582 - 23698674
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcca 133  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  23698582 attttctcaaagtttgttatatccaaaaaatatatatttttagttaagaaccatacgaaaaggacctaaggaattgtacctaagttttctcca 23698674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 2854612 - 2854703
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  2854612 attttctcaaagtttgttatatccaaaaaatatatatttttagttaagaaccatacgaaaaggacctaaggaattgtacctaagttttctcc 2854703  T

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Target: chr1; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 9978131 - 9978222
Alignment:
Q  41 attttctcaaagtttgttatatccaaaa-aatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctc 131  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  9978131 attttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctc 9978222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 19954991 - 19955082
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||    
T  19954991 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacaaaaagtacctaaggaattgtacctaagttttctcc 19955082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 48954294 - 48954385
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  48954294 attttctcaaagtttgttatatccaaaaaatatatatttttagttaagaaccatacgaaaaggacctaaggaattgtacctaagttttctcc 48954385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 14387095 - 14387185
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctc 131  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  14387095 attttctcaaagtttattatatccaaaaaatatgtatttttagttaagaaccatacgaaaaacacctaaggaattgtacctaagttttctc 14387185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 15324718 - 15324626
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  15324718 attttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaaccatacgaaaagcacctaagaaattgtacctaagttttctcc 15324626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 47940650 - 47940742
Alignment:
Q  41 attttctcaaagtttgttatatccaaaa-aatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  47940650 attttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaaccatacgaaaaacacctaaggaattgtacctaagttttctcc 47940742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 27241004 - 27241095
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||||    
T  27241004 attttctcaaagtttgttatatccaaaaaatatatatttttagttaagaaccatacgcaaagcacctaacgaattgtacctaagttttctcc 27241095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 41 - 133
Target Start/End: Original strand, 27926330 - 27926424
Alignment:
Q  41 attttctcaaagtttgttatatccaaaa--aatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcca 133  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  27926330 attttctcaaagtttgttatatccaaaaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtacataagttttctcca 27926424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 41 - 134
Target Start/End: Original strand, 27928377 - 27928471
Alignment:
Q  41 attttctcaaagtttgttatatccaaaa-aatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctccaa 134  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||    
T  27928377 attttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaaccatacgaaaaacacctaaggaattgtacataagttttctccaa 27928471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 4299472 - 4299566
Alignment:
Q  41 attttctcaaagtttgttatatccaaaa---aatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  4299472 attttctcaaagtttgttatatccaaaaaaaaatatgtatttttagttaagaaccatacgaaaaacacctaaggaattgtacctaagttttctcc 4299566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 2125150 - 2125241
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||| ||||||||    
T  2125150 attttctcaaagtttgttatatcaaaaaaatatgtatttttagttaagaactatacgaaaagcacctaagaaattgtacctaaattttctcc 2125241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 41 - 130
Target Start/End: Original strand, 50162618 - 50162708
Alignment:
Q  41 attttctcaaagtttgttatatccaaaa-aatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttct 130  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  50162618 attttctcaaagtttgttatatccaaaaaaatatgtaattttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttct 50162708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 41 - 133
Target Start/End: Complemental strand, 6079475 - 6079383
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcca 133  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||  ||||||||||||||| |||||||||||    
T  6079475 attttctcaaagtttgttatatccaaaaaatatgtatttttagtgaagaaccgtacgaaaaacatctaaggaattgtacctgagttttctcca 6079383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 1387869 - 1387780
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||    
T  1387869 attttctcaaagtttattatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcac-taaggaattgta-gtaagttttctcc 1387780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 51789677 - 51789766
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||| ||||||||| ||||||| |||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  51789677 attttctcaaagtatgttatatctaaaaaatgtgt--ttttagttaagaaccatacgaaaagcatttaaggaattgtacctaagttttctcc 51789766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 9895344 - 9895253
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || |||  |||| ||||||| ||||||||    
T  9895344 attttctcaaagtttgttatatcaaaaaaatatgtatttttagttaagaaccatacgaaaagtacctaaaaaattatacctaaattttctcc 9895253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 51276775 - 51276865
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctc 131  Q
    ||||||||||||||| ||||||  |||||| |||||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||    
T  51276775 attttctcaaagtttattatataaaaaaaaaatgtatttttagctaagaaccatacgaaaagcacctaagaaattgtacctaagttttctc 51276865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 41 - 134
Target Start/End: Complemental strand, 40647209 - 40647114
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaa--tatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctccaa 134  Q
    ||||||||||||||||||||||  ||||||  ||||||||||||||||||||||| ||||||||||  |||||||||||| |||||||||||||||    
T  40647209 attttctcaaagtttgttatataaaaaaaaaatatgtatttttagttaagaaccacacgaaaagcagctaaggaattgtaactaagttttctccaa 40647114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 64 - 132
Target Start/End: Original strand, 49285078 - 49285146
Alignment:
Q  64 caaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  49285078 caaaagatatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcc 49285146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 58 - 132
Target Start/End: Complemental strand, 36880363 - 36880289
Alignment:
Q  58 tatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||||||||| |||||||||||||| |||||||  |||||||||||||||||||||    
T  36880363 tatatccaaaaaatatgtatttttagttaggaaccatacgaaaaacacttaaaaaattgtacctaagttttctcc 36880289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 41 - 133
Target Start/End: Complemental strand, 21930472 - 21930379
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcca 133  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||  |||||||||||| || || ||||||||    
T  21930472 attttcttaaagtttgttatatccaaaaaaatatgtatttttagttaagaaccatacgaaaaacaactaaggaattgtaactgaggtttctcca 21930379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 41 - 110
Target Start/End: Complemental strand, 26208516 - 26208446
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacgaaaagcacttaag 110  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||    
T  26208516 attttctcaaagtttgttatatccaaaaaaatatgtatttttagttgagaaccatacgaaaagcacctaag 26208446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 48645094 - 48645183
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctc 131  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| |||  |||||  ||||| |||||||    
T  48645094 attttctcaaagtttgttatatctaaaaaatatgtatttttagttaagaacc-tacgaaaagcacctaaaaaattgcccctaaattttctc 48645183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 41 - 133
Target Start/End: Complemental strand, 28244049 - 28243952
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaaga-----accatacgaaaagcacttaaggaattgtacctaagttttctcca 133  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||     ||||||| |||||||| ||  |||||||||||||||||| ||||    
T  28244049 attttctcaaagtttgttatatccaaaaaagatgtatttttagttaagaaccaaaccatacaaaaagcacatagagaattgtacctaagttttgtcca 28243952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 42 - 132
Target Start/End: Complemental strand, 16755315 - 16755224
Alignment:
Q  42 ttttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacg-aaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||| ||| | ||||| || ||||||||||||| ||||||| ||||    
T  16755315 ttttttcaaagtttgttatatccaaaacatatgtatttttagttaagaactatatgaaaaagtacctaaggaattgtacgtaagtttgctcc 16755224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 41 - 128
Target Start/End: Original strand, 22339064 - 22339151
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagtttt 128  Q
    ||||||||||||| |||| ||||||| |||  ||||||||||||||||||||||| ||||||||| ||| |||||| |||||||||||    
T  22339064 attttctcaaagtctgttctatccaacaaaggtgtatttttagttaagaaccatatgaaaagcacctaaagaattgcacctaagtttt 22339151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 74 - 132
Target Start/End: Original strand, 36880624 - 36880682
Alignment:
Q  74 gtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  36880624 gtatttttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttctcc 36880682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 27240977 - 27240924
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  27240977 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcc 27240924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 41 - 134
Target Start/End: Complemental strand, 27670234 - 27670147
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctccaa 134  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||| ||||||||     ||| ||||||||||||||||||||    
T  27670234 attttctcaaagttttttatattcaaaaaatatgtatttttagttaagaatcatac-aaaagcac-----gaaatgtacctaagttttctccaa 27670147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 75 - 132
Target Start/End: Original strand, 50627245 - 50627302
Alignment:
Q  75 tatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  50627245 tatttttagttaagaaccatacgaaaagcatataaggaattgtacctaagttttctcc 50627302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 79 - 133
Target Start/End: Complemental strand, 27926304 - 27926250
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcca 133  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  27926304 tttagttaagaaccatacgaaaagcacataaggaattatacctaagttttctcca 27926250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 74 - 131
Target Start/End: Original strand, 1387891 - 1387948
Alignment:
Q  74 gtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctc 131  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  1387891 gtatctttagttaagaaccatacgaaaagcacctaaggaattgtacctaaattttctc 1387948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 74 - 131
Target Start/End: Complemental strand, 19797039 - 19796982
Alignment:
Q  74 gtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctc 131  Q
    |||||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||    
T  19797039 gtatttttagttaaaaaccatacgaaaagcacctaagaaattgtacctaagttttctc 19796982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 19954964 - 19954911
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  19954964 tttagttaagaactatacgaaaagcacataaggaattgtacctaagttttctcc 19954911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 80 - 133
Target Start/End: Original strand, 25297966 - 25298019
Alignment:
Q  80 ttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcca 133  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  25297966 ttagttaagaaccatacgaaaaacacctaaggaattgtacctaagttttctcca 25298019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 47940623 - 47940570
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  47940623 tttagttaagaaccatacgaaaagcacctaagaaattgtacctaagttttctcc 47940570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 41 - 101
Target Start/End: Complemental strand, 29598414 - 29598354
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaa 101  Q
    ||||||||||||||||||||||  ||||||||||||||||||||| | |||||||||||||    
T  29598414 attttctcaaagtttgttatattaaaaaaatatgtatttttagttgataaccatacgaaaa 29598354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 41 - 103
Target Start/End: Complemental strand, 957680 - 957617
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacgaaaagc 103  Q
    ||||||||||||||||||||||| |||||| |||||| ||||||||||||| ||||||||||||    
T  957680 attttctcaaagtttgttatatcaaaaaaaatatgtaattttagttaagaatcatacgaaaagc 957617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 41 - 128
Target Start/End: Original strand, 28447953 - 28448040
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagtttt 128  Q
    ||||||||||||||||||||||  |||||| || |||||||||||| |||| | ||||||| ||  ||| ||||||||||||||||||    
T  28447953 attttctcaaagtttgttatattaaaaaaagatatatttttagttatgaactaaacgaaaaacatataaagaattgtacctaagtttt 28448040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 79 - 133
Target Start/End: Complemental strand, 9978104 - 9978050
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcca 133  Q
    |||||||||||| |||||||||||||| ||||||||||||||||| |||||||||    
T  9978104 tttagttaagaatcatacgaaaagcacataaggaattgtacctaaattttctcca 9978050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 2854585 - 2854532
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||||||||||||||||||||||| |  ||||||||||||||||||||||||||    
T  2854585 tttagttaagaaccatacgaaaagtatctaaggaattgtacctaagttttctcc 2854532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 23698555 - 23698502
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||||||||||||||||||||||| |  ||||||||||||||||||||||||||    
T  23698555 tttagttaagaaccatacgaaaagtatctaaggaattgtacctaagttttctcc 23698502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 40647236 - 40647289
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||| || |||||||||||||| ||||||||||||||||||||||||||    
T  40647236 tttagttaaaaatcatacgaaaagcacctaaggaattgtacctaagttttctcc 40647289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 42561348 - 42561295
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||| |||||||    
T  42561348 tttagttaagaaccatacgaaaagcacctaaggaattgtacttaagatttctcc 42561295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 48954267 - 48954214
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||| |||||| || ||||||||||||||||||||||||||    
T  48954267 tttagttaagaaccatatgaaaagtacctaaggaattgtacctaagttttctcc 48954214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 51789650 - 51789597
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||    
T  51789650 tttagttaaaaaccatacgaaaatcacctaaggaattgtacctaagttttctcc 51789597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 79 - 135
Target Start/End: Complemental strand, 2125123 - 2125067
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctccaac 135  Q
    ||||||||||||||||||||||||||| |||| ||||||| |||| |||||||||||    
T  2125123 tttagttaagaaccatacgaaaagcacataagaaattgtaactaaattttctccaac 2125067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 79 - 130
Target Start/End: Original strand, 5189587 - 5189638
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttct 130  Q
    ||||||||||||||||||||||||||  ||||||||||||||||| ||||||    
T  5189587 tttagttaagaaccatacgaaaagcatctaaggaattgtacctaaattttct 5189638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 79 - 130
Target Start/End: Complemental strand, 14387068 - 14387017
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttct 130  Q
    |||||||||||||||||||||| |||  ||||||||||||||||||||||||    
T  14387068 tttagttaagaaccatacgaaatgcatctaaggaattgtacctaagttttct 14387017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 79 - 130
Target Start/End: Original strand, 15324745 - 15324796
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttct 130  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||| ||||||    
T  15324745 tttagttaagaaccatacgaaaagcacataaggaattgtacataaattttct 15324796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 41 - 128
Target Start/End: Original strand, 35547780 - 35547867
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagtttt 128  Q
    |||||||  ||||||| ||||||||||||| ||||||||||| || ||||  |||||||||||| |||| ||||||||| ||| ||||    
T  35547780 attttctataagtttgatatatccaaaaaaaatgtatttttaatttagaatgatacgaaaagcatttaaagaattgtacataaatttt 35547867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 362475 - 362528
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||||||||||| |||||||||||||| ||| ||||||||||||| ||||||||    
T  362475 tttagttaagaatcatacgaaaagcacctaaagaattgtacctaaattttctcc 362528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 21930496 - 21930549
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||| ||| |||| |||||||||||| ||||||||    
T  21930496 tttagttaagaaccatacgaaaaacacctaagtaattgtacctaaattttctcc 21930549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 26208543 - 26208596
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||| ||||||||||||||||||| ||||||||| ||| ||||||||||||    
T  26208543 tttagttcagaaccatacgaaaagcacctaaggaattatacataagttttctcc 26208596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 128
Target Start/End: Complemental strand, 27928351 - 27928302
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagtttt 128  Q
    |||||||||||||||||| |||||||| |||||||||||| |||||||||    
T  27928351 tttagttaagaaccatacaaaaagcacataaggaattgtatctaagtttt 27928302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 29598455 - 29598508
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||||||||||||||||| ||||| || ||| ||||||||||||||||||||||    
T  29598455 tttagttaagaaccatacaaaaagtacctaacgaattgtacctaagttttctcc 29598508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 41 - 128
Target Start/End: Original strand, 5059642 - 5059727
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagtttt 128  Q
    ||||| |||||||||||||||||  ||||| |||||||||||  ||| ||||||||||||  ||| | | ||||||||||||||||||    
T  5059642 attttatcaaagtttgttatatcataaaaaaatgtatttttacctaataaccatacgaaa--cacatcaagaattgtacctaagtttt 5059727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 41 - 128
Target Start/End: Original strand, 16518380 - 16518468
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgta-tttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagtttt 128  Q
    ||||||||| |||||||| ||||||||||| || || |||||  ||||||||||||||||||| |  ||| |||||| |||||||||||    
T  16518380 attttctcatagtttgttgtatccaaaaaagatctatttttttattaagaaccatacgaaaagtatctaaagaattgcacctaagtttt 16518468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 79 - 134
Target Start/End: Original strand, 27670261 - 27670317
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgt-acctaagttttctccaa 134  Q
    ||||||||| ||||||||||||||||| |||||||||||  ||||||||||||||||    
T  27670261 tttagttaaaaaccatacgaaaagcacataaggaattgtgccctaagttttctccaa 27670317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 105
Target Start/End: Complemental strand, 2302494 - 2302429
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatac-gaaaagcac 105  Q
    |||||||||||||| | || |||||| ||| ||||| ||||||||||||||||||| |||||||||    
T  2302494 attttctcaaagttcgctacatccaagaaagatgtaattttagttaagaaccatacggaaaagcac 2302429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 134
Target Start/End: Complemental strand, 25297968 - 25297920
Alignment:
Q  85 taagaaccatacgaaaagcacttaaggaattgtacctaagttttctccaa 134  Q
    |||||| |||||||||||||| |||||||||||| |||||||||||||||    
T  25297968 taagaatcatacgaaaagcacctaaggaattgta-ctaagttttctccaa 25297920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 51276748 - 51276695
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||||||| || | |||| ||||||| ||||||||    
T  51276748 tttagttaagaaccatacgaaaagcacctatgaaattatacctaaattttctcc 51276695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 131
Target Start/End: Complemental strand, 3607782 - 3607730
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctc 131  Q
    |||||||||||||||||| |||||||| |||| |||| ||||||| |||||||    
T  3607782 tttagttaagaaccatacaaaaagcacctaagaaattctacctaaattttctc 3607730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 39015273 - 39015328
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatac 96  Q
    |||||||||||||| |||||| ||| ||||  |||||||| |||||||||||||||    
T  39015273 attttctcaaagttcgttataaccacaaaaagtgtattttaagttaagaaccatac 39015328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 134
Target Start/End: Complemental strand, 50856374 - 50856319
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctccaa 134  Q
    ||||| |||||| |||||||||||||| ||| ||||| |||||||||||| |||||    
T  50856374 tttagctaagaatcatacgaaaagcacctaaagaattttacctaagttttatccaa 50856319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 132
Target Start/End: Complemental strand, 14983660 - 14983626
Alignment:
Q  98 aaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||| |||||||||||||||||||||||||||    
T  14983660 aaaagcatttaaggaattgtacctaagttttctcc 14983626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 91
Target Start/End: Original strand, 18651330 - 18651380
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaac 91  Q
    ||||||||||| ||||||||| | |||||| ||||||||||| ||||||||    
T  18651330 attttctcaaaatttgttataactaaaaaaaatgtatttttatttaagaac 18651380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 79 - 128
Target Start/End: Original strand, 957707 - 957756
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagtttt 128  Q
    |||||||||||| |||||||||| ||| |||| ||||||| |||||||||    
T  957707 tttagttaagaatcatacgaaaaacacctaagaaattgtatctaagtttt 957756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 79 - 128
Target Start/End: Complemental strand, 16518351 - 16518302
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagtttt 128  Q
    ||||||||| |||||||| |||||||| |||| ||||| |||||||||||    
T  16518351 tttagttaaaaaccataccaaaagcacctaagaaattgcacctaagtttt 16518302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 79 - 128
Target Start/End: Complemental strand, 49284347 - 49284298
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagtttt 128  Q
    |||||||||||||||||| |||| ||  |||| |||||||||||||||||    
T  49284347 tttagttaagaaccatacaaaaaacaactaagaaattgtacctaagtttt 49284298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 50162591 - 50162538
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||| |||| |||||||| ||||  || ||||||||||||||||||||||||||    
T  50162591 tttaattaaaaaccatacaaaaaatacctaaggaattgtacctaagttttctcc 50162538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 113
Target Start/End: Original strand, 19204113 - 19204185
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaa 113  Q
    ||||||||||||||| |||||  || ||||  |||||||||||  ||||| |||||||||| ||| |||||||    
T  19204113 attttctcaaagtttattatagtcacaaaaagtgtatttttaggcaagaatcatacgaaaaacacataaggaa 19204185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 113
Target Start/End: Original strand, 19206523 - 19206595
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaa 113  Q
    ||||||||||||||| |||||  || ||||  |||||||||||  ||||| |||||||||| ||| |||||||    
T  19206523 attttctcaaagtttattatagtcacaaaaagtgtatttttaggcaagaatcatacgaaaaacacataaggaa 19206595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 86; Significance: 3e-41; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 41 - 134
Target Start/End: Complemental strand, 34052370 - 34052277
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctccaa 134  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  34052370 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaggaaatgtacctaagttttctccaa 34052277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 10936550 - 10936641
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  10936550 attttctcaaagtttgttataaccaaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcc 10936641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 38883312 - 38883221
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  38883312 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttctcc 38883221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 35665696 - 35665786
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctc 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  35665696 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaaaaaccatacgaaaagcacctaaggaattgtacctaagttttctc 35665786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 24836111 - 24836020
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| |||||||||||||||||||||    
T  24836111 attttctcaaagtttgttatatccaaaaaatatgtatttttagttnagaaccatacgaaaagcacctaagcaattgtacctaagttttctcc 24836020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 30259146 - 30259237
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||    
T  30259146 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacaaaaagcacccaaggaattgtacctaagttttctcc 30259237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 30594784 - 30594693
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| ||||||||||||||||||||||||||    
T  30594784 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaactatgcgaaaagcacctaaggaattgtacctaagttttctcc 30594693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 31231694 - 31231787
Alignment:
Q  41 attttctcaaagtttgttatat--ccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  31231694 attttctcaaagtttgttatatgtccaaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcc 31231787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 41 - 130
Target Start/End: Original strand, 35339358 - 35339447
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttct 130  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||||||||||||    
T  35339358 attttctcaaagtttgttatatccaaaaaatatgtatttttatttaagaaccatacgaaaagtacataaggaattgtacctaagttttct 35339447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 25742511 - 25742602
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| || ||||||||||||    
T  25742511 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaacaaccatacgaaaagcacttaagaaattgcacttaagttttctcc 25742602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 20184318 - 20184410
Alignment:
Q  41 attttctcaaagtttgttatatccaaaa-aatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||||    
T  20184318 attttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaatcatacgaaaagcagctaaggaattgtacctaagttttctcc 20184410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 45 - 132
Target Start/End: Complemental strand, 48103455 - 48103368
Alignment:
Q  45 tctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| |||| |||||||||||||||||||||    
T  48103455 tctcaaagtttgttatatccaaaaaatatgtatttttagttaagaatcatacgaaaaacacctaagaaattgtacctaagttttctcc 48103368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 38528490 - 38528583
Alignment:
Q  41 attttctcaaagtttgttatatccaaaa--aatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||  ||||  ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  38528490 attttctcaaagtttgttatataaaaaaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcc 38528583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 41 - 133
Target Start/End: Original strand, 3953122 - 3953214
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcca 133  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||| ||||||| ||||||||||||||    
T  3953122 attttcacaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacaaaaagtacctaagtaattgtatctaagttttctcca 3953214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 9285794 - 9285885
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||| ||||||||||||| ||||||||    
T  9285794 attttatcaaagtttgttatatccaaaaaatatgtatttttatttaagaaccatacgaaaagtacctaaagaattgtacctaaattttctcc 9285885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 9289861 - 9289952
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||| ||||||||||||| ||||||||    
T  9289861 attttatcaaagtttgttatatccaaaaaatatgtatttttatttaagaaccatacgaaaagtacctaaagaattgtacctaaattttctcc 9289952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 41 - 133
Target Start/End: Complemental strand, 12142284 - 12142191
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaa-atatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcca 133  Q
    |||||||||||| |||||||||||||||| |||| ||||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||    
T  12142284 attttctcaaagattgttatatccaaaaatatatatatttttagttaagaaccatacccaaagcacgtaaggaattgtacctaagttttctcca 12142191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 45997588 - 45997679
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||| ||| |||||||||| ||||| |||||||||    
T  45997588 attttctcaaagtttattatatccaaaaaatatgtatttttagttaagaaccatacctaaaacacctaaggaattgcacctaggttttctcc 45997679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 41 - 134
Target Start/End: Original strand, 39617921 - 39618014
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctccaa 134  Q
    |||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||| ||| |||||||| |||||||||||||||    
T  39617921 attttctcaaagtttgttatatccaaaaaaatatttatttttagttaagaactatacgaaaagcacctaaagaattgta-ctaagttttctccaa 39618014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 37093859 - 37093768
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||  || |||| |||||||||||| ||||||||    
T  37093859 attttctcaaagtttgttatatccaaaaaatatatatttttaattaagaatcatacgaaaaatacctaagaaattgtacctaaattttctcc 37093768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 47237505 - 47237599
Alignment:
Q  41 attttctcaaagtttgttatat---ccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||     |||||| |||||||||||||||||||||||||||||||||| | || |||||||||||||||||||||    
T  47237505 attttctcaaagtttgttatataaaaaaaaaaaaatgtatttttagttaagaaccatacgaaaagcaccttagaaattgtacctaagttttctcc 47237599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 41 - 134
Target Start/End: Complemental strand, 29277928 - 29277836
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctccaa 134  Q
    ||||||||||| |||||| ||||||||| |  |||||||||||||||||||||||| ||||| || ||| ||||||||||||||||||||||||    
T  29277928 attttctcaaactttgttgtatccaaaacag-tgtatttttagttaagaaccatacaaaaagtacctaaagaattgtacctaagttttctccaa 29277836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 41 - 101
Target Start/End: Complemental strand, 40358206 - 40358146
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaa 101  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  40358206 attttctcaaagtttgttatatcaaaaaaatatgcatttttagttaagaaccatacgaaaa 40358146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 79 - 134
Target Start/End: Original strand, 24836138 - 24836193
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctccaa 134  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  24836138 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctccaa 24836193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 65 - 128
Target Start/End: Complemental strand, 38528457 - 38528394
Alignment:
Q  65 aaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagtttt 128  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||    
T  38528457 aaaaaatatgtatttttagttaagaaccatacaaaaagcatttaaggaattgtacctaactttt 38528394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 74 - 132
Target Start/End: Complemental strand, 35665691 - 35665633
Alignment:
Q  74 gtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  35665691 gtatttttagttaagaaccatacgaaaagcacctaagcaattgtacctaagttttctcc 35665633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 38883335 - 38883393
Alignment:
Q  75 tatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcca 133  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  38883335 tatttttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttctcca 38883393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 35339331 - 35339278
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  35339331 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcc 35339278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 41 - 102
Target Start/End: Original strand, 24123835 - 24123898
Alignment:
Q  41 attttctcaaagtttgttatatccaaaa--aatatgtatttttagttaagaaccatacgaaaag 102  Q
    ||||||||||||||||||||||||||||  |||||||||||||| |||||||||||||||||||    
T  24123835 attttctcaaagtttgttatatccaaaaaaaatatgtatttttaattaagaaccatacgaaaag 24123898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 80 - 132
Target Start/End: Complemental strand, 33721879 - 33721827
Alignment:
Q  80 ttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  33721879 ttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcc 33721827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 79 - 134
Target Start/End: Complemental strand, 31231667 - 31231612
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctccaa 134  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  31231667 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctccaa 31231612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 79 - 133
Target Start/End: Complemental strand, 20184291 - 20184237
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcca 133  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  20184291 tttagttaagaatcatacgaaaagcacctaaggaattgtacctaagttttctcca 20184237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 34052397 - 34052450
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  34052397 tttagctaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcc 34052450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 79 - 133
Target Start/End: Complemental strand, 10936523 - 10936469
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcca 133  Q
    |||||||||||||| |||||||||||| ||||||||||||| |||||||||||||    
T  10936523 tttagttaagaaccgtacgaaaagcacctaaggaattgtacataagttttctcca 10936469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 74 - 136
Target Start/End: Complemental strand, 24123813 - 24123751
Alignment:
Q  74 gtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctccaaca 136  Q
    ||||||||||||| ||||||||| ||||| || ||||||||||||||||| ||||||||||||    
T  24123813 gtatttttagttaggaaccatacaaaaagtacataaggaattgtacctaaattttctccaaca 24123751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 3953095 - 3953042
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||| |||||||||||||| || ||||||||||||||||||||||||||    
T  3953095 tttagttaaaaaccatacgaaaagtacataaggaattgtacctaagttttctcc 3953042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 79 - 128
Target Start/End: Complemental strand, 30259119 - 30259070
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagtttt 128  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  30259119 tttagttaagaaccataggaaaagcacctaaggaattgtacctaagtttt 30259070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 44 - 132
Target Start/End: Original strand, 39143795 - 39143877
Alignment:
Q  44 ttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||||||||||||||||||      ||||| ||| | ||||||||||||||||||||| ||| ||| ||||||||||||||||||||||    
T  39143795 ttctcaaagtttgttatat------aatatatatatatagttaagaaccatacgaaaaacacctaatgaattgtacctaagttttctcc 39143877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 41 - 133
Target Start/End: Original strand, 31521605 - 31521692
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcca 133  Q
    ||||| ||||||||| |||||||||||||||||  ||||||||||||||     |||||||| || | ||||||| |||||||||||||||||    
T  31521605 attttttcaaagtttattatatccaaaaaatattcatttttagttaaga-----acgaaaagtacctgaggaattatacctaagttttctcca 31521692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 87 - 134
Target Start/End: Original strand, 17101700 - 17101747
Alignment:
Q  87 agaaccatacgaaaagcacttaaggaattgtacctaagttttctccaa 134  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||    
T  17101700 agaaccatacgaaaagcacctaagaaattgtacctaagttttctccaa 17101747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 79 - 134
Target Start/End: Complemental strand, 45997561 - 45997506
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctccaa 134  Q
    |||||||||||||||||| |||||||| || | |||||||||||||||||||||||    
T  45997561 tttagttaagaaccatacaaaaagcacatatgaaattgtacctaagttttctccaa 45997506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 51 - 113
Target Start/End: Complemental strand, 7955062 - 7955000
Alignment:
Q  51 agtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaa 113  Q
    ||||| ||||||  |||||| ||||||||||||||||||||||||| |||||||| |||||||    
T  7955062 agttttttatataaaaaaaaaatgtatttttagttaagaaccatacaaaaagcacataaggaa 7955000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 79 - 129
Target Start/End: Original strand, 30594811 - 30594861
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttc 129  Q
    ||||||||||||||||||||||||||  |||||||||||||||||| ||||    
T  30594811 tttagttaagaaccatacgaaaagcatctaaggaattgtacctaagctttc 30594861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 132
Target Start/End: Complemental strand, 17101699 - 17101654
Alignment:
Q  87 agaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||    
T  17101699 agaaccatacgaaaagcacctaagaaattgtacctaagttttctcc 17101654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 40596771 - 40596852
Alignment:
Q  47 tcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagtttt 128  Q
    ||||||||||||||| | ||||||  |||||||||||||||||||||||| |||| ||| ||| ||| ||| ||||| ||||    
T  40596771 tcaaagtttgttataacaaaaaaagttgtatttttagttaagaaccatacaaaaaacacctaaagaaatgtgcctaaatttt 40596852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 134
Target Start/End: Complemental strand, 9285767 - 9285712
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctccaa 134  Q
    |||| ||||||||||||| ||||||||  || ||||||||||||||||||||||||    
T  9285767 tttaattaagaaccatacaaaaagcaccaaatgaattgtacctaagttttctccaa 9285712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 134
Target Start/End: Complemental strand, 9289834 - 9289779
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctccaa 134  Q
    |||| ||||||||||||| ||||||||  || ||||||||||||||||||||||||    
T  9289834 tttaattaagaaccatacaaaaagcaccaaatgaattgtacctaagttttctccaa 9289779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 12142311 - 12142364
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||| ||||||||| ||| |||||||||||||| || ||||||||    
T  12142311 tttagttaagaactatacgaaaaacacataaggaattgtacccaaattttctcc 12142364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 133
Target Start/End: Original strand, 22723308 - 22723401
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgta-tttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcca 133  Q
    |||||||||||||||||||||  ||||||| ||||| |||||| |||| ||||||| ||||||||  ||| ||||| ||  |||||||| ||||    
T  22723308 attttctcaaagtttgttatactcaaaaaagatgtattttttaattaaaaaccataggaaaagcatctaaagaattatatgtaagttttgtcca 22723401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 25742488 - 25742435
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||| ||||| ||| |||| |||||||| ||||||||||||    
T  25742488 tttagttaagaaccataggaaaaacacctaagaaattgtacataagttttctcc 25742435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 91
Target Start/End: Complemental strand, 28723616 - 28723567
Alignment:
Q  42 ttttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaac 91  Q
    |||| ||||||||| ||||||||| ||||| |||||||||||||||||||    
T  28723616 ttttttcaaagtttattatatccataaaatgtgtatttttagttaagaac 28723567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 101
Target Start/End: Complemental strand, 33749735 - 33749674
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatg-tatttttagttaagaaccatacgaaaa 101  Q
    ||||||||||||||| ||||||| |||||  ||| |||||||||||||||| ||||||||||    
T  33749735 attttctcaaagtttattatatctaaaaataatgatatttttagttaagaatcatacgaaaa 33749674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 39617894 - 39617841
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||| | ||  |||| |||||||||||||||||||||    
T  39617894 tttagttaagaaccatacgaagaacatctaagaaattgtacctaagttttctcc 39617841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 47237485 - 47237433
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||| ||||||||| | ||||||| ||||||||||||||||    
T  47237485 tttagttaagaaccataggaaaagcacct-aggaattatacctaagttttctcc 47237433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 48103483 - 48103536
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||||||||||||||||| |||||||| ||| ||||||||  ||||||||||||    
T  48103483 tttagttaagaaccatacaaaaagcacctaaagaattgtagataagttttctcc 48103536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 131
Target Start/End: Complemental strand, 39143765 - 39143713
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctc 131  Q
    |||||| |||||||||||||||||||   || |||||||||||||||||||||    
T  39143765 tttagtcaagaaccatacgaaaagcatccaatgaattgtacctaagttttctc 39143713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 11486912 - 11486865
Alignment:
Q  84 ttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctc 131  Q
    |||||||||||||||||||||  |||| ||||||||||||| ||||||    
T  11486912 ttaagaaccatacgaaaagcatctaagaaattgtacctaagctttctc 11486865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 95
Target Start/End: Original strand, 4453188 - 4453230
Alignment:
Q  53 tttgttatatccaaaaaatatgtatttttagttaagaaccata 95  Q
    |||| ||||||| |||||| |||||||||||||||||||||||    
T  4453188 tttgctatatccgaaaaatgtgtatttttagttaagaaccata 4453230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 40358233 - 40358289
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaagga---attgtacctaagttttctcc 132  Q
    |||||||||||| |||| ||||||||| ||||||   ||||||||||||||||||||    
T  40358233 tttagttaagaatcataggaaaagcacctaaggaggaattgtacctaagttttctcc 40358289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 79 - 128
Target Start/End: Original strand, 10398437 - 10398486
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagtttt 128  Q
    |||||||||||||||||| |||||||  ||||||| || |||||||||||    
T  10398437 tttagttaagaaccatacaaaaagcatataaggaaatgcacctaagtttt 10398486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 119
Target Start/End: Complemental strand, 31521578 - 31521538
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtac 119  Q
    ||||||||||||||||||||||||||  |||| ||||||||    
T  31521578 tttagttaagaaccatacgaaaagcatctaagaaattgtac 31521538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 85; Significance: 1e-40; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 41 - 133
Target Start/End: Original strand, 24101912 - 24102004
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcca 133  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  24101912 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtacttaagttttctcca 24102004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 41 - 133
Target Start/End: Complemental strand, 34455976 - 34455884
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcca 133  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  34455976 attttctcaaagtttgttatatccaaaaaatatgtatttttaattaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcca 34455884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 16705824 - 16705733
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  16705824 attttatcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcc 16705733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 3116967 - 3116876
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || ||||||||||||||||||||||    
T  3116967 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcaccaaaagaattgtacctaagttttctcc 3116876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 9281427 - 9281518
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  9281427 attttctcaaagtttgttatatccaaaaaatatatatttttagttaagaaccatacgaaaaggacctaaggaattgtacctaagttttctcc 9281518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 34490547 - 34490456
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||||    
T  34490547 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaaacacctaaagaattgtacctaagttttctcc 34490456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 45408716 - 45408625
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||    
T  45408716 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacaaaaaacacctaaggaattgtacctaagttttctcc 45408625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 1924060 - 1924152
Alignment:
Q  41 attttctcaaagtttgttatatccaaaa-aatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  1924060 attttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaaccatacgaaaaacacctaaggaattgtacctaagttttctcc 1924152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 41 - 133
Target Start/End: Original strand, 12850622 - 12850714
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcca 133  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||| ||||||||||||||||    
T  12850622 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcatctgaggaattggacctaagttttctcca 12850714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 20892976 - 20892884
Alignment:
Q  41 attttctcaaagtttgttatatcca-aaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  20892976 attttctcaaagtttgttatatccataaaaatatgtatttttagttaagaaccatacgaaaagcacctaagaaattgtacctaagttttctcc 20892884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 41 - 133
Target Start/End: Complemental strand, 22269813 - 22269721
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcca 133  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| ||| |||||||||||||||||||||||||||    
T  22269813 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaaaaatcatacgaaaaacacctaaggaattgtacctaagttttctcca 22269721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 23835968 - 23835876
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  23835968 attttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtacataagttttctcc 23835876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 41 - 127
Target Start/End: Complemental strand, 2818757 - 2818671
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttt 127  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  2818757 attttctcaaagtttgatatatccaaaaaatatgtatttttagttaagaatcatacgaaaagcacctaaggaattgtacctaagttt 2818671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 9933649 - 9933740
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||    
T  9933649 attttctcaaagtttattatatctaaaaaatatgtatttttagttaagaaccatacgaaaagcacctaagaaattgtacctaaattttctcc 9933740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 6605826 - 6605738
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||   ||||||||||||| ||||||||||||||||||||||||||    
T  6605826 attttctcaaagtttgttatatccaaataatatgtatttttagttaaga---atacgaaaagcacataaggaattgtacctaagttttctcc 6605738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 42713857 - 42713949
Alignment:
Q  41 attttctcaaagtttgttatatccaaaa-aatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||    
T  42713857 attttctcaaagtttattatatccaaaaaaatatgtatttttagttaagaatcatgcgaaaagcacttaagaaattgtacctaagttttctcc 42713949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 7737156 - 7737065
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctc 131  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||| |||| ||||||||||||||||||||    
T  7737156 attttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaatcataccaaaagcacctaagaaattgtacctaagttttctc 7737065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 27920663 - 27920573
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| |||| ||||||| |||||||||||||    
T  27920663 attttttcaaagtttgttatatccaaaaaatatgtagttttagttaagacccatacgaaaagcacctaagaaattgta-ctaagttttctcc 27920573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 9850838 - 9850923
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctc 131  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| |||    ||||||||||||||||||||||    
T  9850838 attttctcaaaatttgttatatc-aaaaaatatgtatttttagttaagaaccatacgaaaaacac----ggaattgtacctaagttttctc 9850923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 41 - 133
Target Start/End: Original strand, 29229443 - 29229535
Alignment:
Q  41 attttctcaaa-gtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcca 133  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |  ||| |||||||| ||||||||||||||    
T  29229443 attttctcaaaagtttattatatccaaaaaatatgtatttttagttaagaaccatacgaaaagtaactaaagaattgta-ctaagttttctcca 29229535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 41 - 133
Target Start/End: Original strand, 29342743 - 29342835
Alignment:
Q  41 attttctcaaa-gtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcca 133  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |  ||| |||||||| ||||||||||||||    
T  29342743 attttctcaaaagtttattatatccaaaaaatatgtatttttagttaagaaccatacgaaaagtaactaaagaattgta-ctaagttttctcca 29342835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 74 - 132
Target Start/End: Original strand, 34490569 - 34490627
Alignment:
Q  74 gtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  34490569 gtatttttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcc 34490627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 133 - 194
Target Start/End: Original strand, 26570279 - 26570340
Alignment:
Q  133 aacataatatatcaacttatatgaagttatgtgtccacttccctatgtcctgtgaaatatat 194  Q
    |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  26570279 aacataatatatcaacttatatgaagttatgtttccacttccatatgtcctgtgaaatatat 26570340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 74 - 132
Target Start/End: Complemental strand, 24101890 - 24101832
Alignment:
Q  74 gtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  24101890 gtatatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcc 24101832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 41 - 133
Target Start/End: Complemental strand, 7116461 - 7116369
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcca 133  Q
    |||||||||||| ||||| ||||||| |||  ||||||||||||| |||||||||||||||| |  ||| |||||||||||||||||| ||||    
T  7116461 attttctcaaagattgttctatccaacaaaggtgtatttttagttgagaaccatacgaaaagtatctaaagaattgtacctaagttttgtcca 7116369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 41 - 130
Target Start/End: Complemental strand, 43476037 - 43475946
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaa--tatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttct 130  Q
    ||||||||||||||| ||||||||||||||  ||| ||||||||||| | ||||||||||||| ||| | ||||||||||| ||||||||||    
T  43476037 attttctcaaagtttattatatccaaaaaaaatatatatttttagtttaaaaccatacgaaaatcacctgaggaattgtacataagttttct 43475946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 79 - 133
Target Start/End: Original strand, 45408743 - 45408797
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcca 133  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  45408743 tttaattaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcca 45408797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 1924033 - 1923980
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  1924033 tttagttaagaaccatacgaaaagcacctaagaaattgtacctaagttttctcc 1923980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 7737183 - 7737236
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  7737183 tttagttaagaatcatacgaaaagcacctaaggaattgtacctaagttttctcc 7737236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 41 - 120
Target Start/End: Original strand, 17434760 - 17434840
Alignment:
Q  41 attttctcaaagtttgttatatcc-aaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacc 120  Q
    |||||||||||||||||||||||| ||||||||| | | |||||||||||| |||||||||| ||  ||||||||||||||    
T  17434760 attttctcaaagtttgttatatccaaaaaaatatatttatttagttaagaatcatacgaaaaacatctaaggaattgtacc 17434840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 79 - 134
Target Start/End: Original strand, 2818784 - 2818839
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctccaa 134  Q
    ||||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||    
T  2818784 tttagttaagaaccatacgaaaaacacctaaagaattgtacctaagttttctccaa 2818839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 77 - 132
Target Start/End: Original strand, 22269838 - 22269893
Alignment:
Q  77 tttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||||||||  ||||||||||||| ||||||||||||    
T  22269838 tttttagttaagaaccatacgaaaagcatctaaggaattgtacgtaagttttctcc 22269893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 79 - 133
Target Start/End: Original strand, 16705851 - 16705905
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcca 133  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||| |||||||||    
T  16705851 tttagttaaaaaccatacgaaaagcacctaaggaattgtacctaaattttctcca 16705905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 3116994 - 3117047
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||||||  || |||||||||||||||||||||||    
T  3116994 tttagttaagaaccatacgaaaagcagctatggaattgtacctaagttttctcc 3117047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 43858552 - 43858605
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||||||||||||||||||||||| || ||||||||||||||||| ||||||||    
T  43858552 tttagttaagaaccatacgaaaagtacctaaggaattgtacctaaattttctcc 43858605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 79 - 131
Target Start/End: Original strand, 10552999 - 10553051
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctc 131  Q
    |||||||||||| |||||||||| ||| |||||||||||||||||||||||||    
T  10552999 tttagttaagaatcatacgaaaaacacctaaggaattgtacctaagttttctc 10553051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 41 - 128
Target Start/End: Original strand, 22346454 - 22346542
Alignment:
Q  41 attttctcaaagttt-gttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagtttt 128  Q
    ||||||| ||||||| |||| | |||||||| |||||||||||||||| ||||||||||||||||| || |||| || |||||| ||||    
T  22346454 attttctgaaagttttgttaaaaccaaaaaagatgtatttttagttaaaaaccatacgaaaagcacatacggaaatgcacctaaatttt 22346542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 79 - 134
Target Start/End: Complemental strand, 9281400 - 9281345
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctccaa 134  Q
    ||||||||||||||||| |||||| || |||||||||||||| |||||||||||||    
T  9281400 tttagttaagaaccatatgaaaagtacctaaggaattgtaccaaagttttctccaa 9281345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 73 - 132
Target Start/End: Original strand, 20892997 - 20893055
Alignment:
Q  73 tgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||||||||||||||||| |||||||||||||| ||||||||| || |||||||||||||    
T  20892997 tgtatttttagttaagaatcatacgaaaagcacctaaggaattata-ctaagttttctcc 20893055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 9933622 - 9933570
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||    
T  9933622 tttagttaagaaccataggaaaagcac-taatgaattgtacctaagttttctcc 9933570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 27920690 - 27920743
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||||||  |||  |||||||||||||||||||||    
T  27920690 tttagttaagaaccatacgaaaagcagctaaaaaattgtacctaagttttctcc 27920743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 43476064 - 43476117
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||| ||| ||||||||| ||||||| ||||||||    
T  43476064 tttagttaagaaccatacgaaaaacacctaaggaattatacctaaattttctcc 43476117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 132
Target Start/End: Original strand, 6605858 - 6605905
Alignment:
Q  85 taagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||||||||||| |||||||| ||| ||||||||||||||||||||||    
T  6605858 taagaaccatacaaaaagcacctaaagaattgtacctaagttttctcc 6605905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 128
Target Start/End: Original strand, 39243063 - 39243150
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagtttt 128  Q
    ||||| |||||||||||||||||||| | |  |||||||||||| ||||||||||| ||||  || ||| |||||||| |||| ||||    
T  39243063 attttatcaaagtttgttatatccaacataggtgtatttttagtcaagaaccatacaaaaaatacctaaagaattgtatctaaatttt 39243150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 133
Target Start/End: Original strand, 8111692 - 8111745
Alignment:
Q  80 ttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcca 133  Q
    ||||||||||||||||| ||||| || |||| ||||||| ||||||||||||||    
T  8111692 ttagttaagaaccatacaaaaaggacctaagaaattgtaactaagttttctcca 8111745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 128
Target Start/End: Complemental strand, 37341023 - 37340970
Alignment:
Q  75 tatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagtttt 128  Q
    |||||||||||||||||||||| ||||  ||||||  |||||||||||||||||    
T  37341023 tatttttagttaagaaccatacaaaaaatacttaaaaaattgtacctaagtttt 37340970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 42713830 - 42713777
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||| ||| ||||||||| || |||| ||||||||    
T  42713830 tttagttaagaaccatacgaaaaacacctaaggaattatatctaaattttctcc 42713777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 134
Target Start/End: Complemental strand, 12850595 - 12850540
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctccaa 134  Q
    ||||||||| |||||||| ||||| || ||||||||||||||||| |||| |||||    
T  12850595 tttagttaaaaaccatacaaaaagtacctaaggaattgtacctaaattttatccaa 12850540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 132
Target Start/End: Complemental strand, 29229414 - 29229361
Alignment:
Q  81 tagttaagaaccatacgaaaa--gcacttaaggaattgtacctaagttttctcc 132  Q
    |||||||||| ||||||||||  |||| |||| |||||||||||||||||||||    
T  29229414 tagttaagaatcatacgaaaaaagcacataagtaattgtacctaagttttctcc 29229361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 132
Target Start/End: Complemental strand, 29342714 - 29342661
Alignment:
Q  81 tagttaagaaccatacgaaaa--gcacttaaggaattgtacctaagttttctcc 132  Q
    |||||||||| ||||||||||  |||| |||| |||||||||||||||||||||    
T  29342714 tagttaagaatcatacgaaaaaagcacataagtaattgtacctaagttttctcc 29342661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 84; Significance: 4e-40; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 45925 - 45834
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  45925 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctcc 45834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 79 - 133
Target Start/End: Original strand, 45952 - 46006
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcca 133  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  45952 tttagttaagaaccataagaaaagcacctaaggaattgtacctaagttttctcca 46006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 84; Significance: 4e-40; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 885476 - 885385
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  885476 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctcc 885385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 21380021 - 21380112
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  21380021 attttctcaatgtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcc 21380112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 41 - 134
Target Start/End: Original strand, 11687223 - 11687316
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctccaa 134  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  11687223 attttctcaaagtttgttatatcaaaaaaatatgtatttttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttctccaa 11687316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 8091153 - 8091063
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctc 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||    
T  8091153 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtatctaaattttctc 8091063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 41 - 139
Target Start/End: Complemental strand, 20501797 - 20501699
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctccaacataa 139  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||| ||||    
T  20501797 attttctcgaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaaacacctaaggaattgtaactaagttttctccaaaataa 20501699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 41 - 133
Target Start/End: Complemental strand, 3369076 - 3368984
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcca 133  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||  ||||||||||||    
T  3369076 attttctcaaagtttgttatattcaaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtactcaagttttctcca 3368984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 13439787 - 13439695
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  13439787 attttctcaaagtttgttatatccaaaaaaatatgtatttttagctaagaaccatacgaaaagtacttaaggaattgtacctaagttttctcc 13439695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 15546723 - 15546632
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||  ||||||||||||||||||||||||||    
T  15546723 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacaaaaaacaactaaggaattgtacctaagttttctcc 15546632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 7808700 - 7808610
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctc 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||| |||||||||||||||||||||||||    
T  7808700 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaaaaaccaaacgaaaaacacctaaggaattgtacctaagttttctc 7808610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 41 - 128
Target Start/End: Complemental strand, 29609092 - 29609005
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagtttt 128  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  29609092 attttctcaaagtttgttatctccaaaaaagatgtatttttagttaagaaccacacgaaaagcacttaaagaattgtacctaagtttt 29609005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 41 - 129
Target Start/End: Original strand, 13172653 - 13172742
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaa-ttgtacctaagttttc 129  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||| |||||||||    
T  13172653 attttctcaaagtttgttatatccaaaaaatatgtatttttacttaagaaccatacgaaaaacacttaaggaatttgtacttaagttttc 13172742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 4890560 - 4890652
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  4890560 attttctcaaagtttgttatatccaaaaaaatatgcgtttttagttaagaaccatacgaaaagcacctaaggaattgtacctaaattttctcc 4890652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 41 - 130
Target Start/End: Original strand, 18998196 - 18998286
Alignment:
Q  41 attttctcaaagtttgttatatccaaaa-aatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttct 130  Q
    ||||||||||||||||||||||| |||| |||||||||||||| |||||||||||||||||||||| |||||||||||| |||| ||||||    
T  18998196 attttctcaaagtttgttatatcaaaaaaaatatgtatttttaattaagaaccatacgaaaagcacctaaggaattgtagctaaattttct 18998286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 41 - 119
Target Start/End: Complemental strand, 14393655 - 14393574
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaa---atatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtac 119  Q
    |||||||||||||||||||||||||||||   ||||||||||||||||||||| |||||||||||||| |||||||||||||    
T  14393655 attttctcaaagtttgttatatccaaaaagaaatatgtatttttagttaagaatcatacgaaaagcacctaaggaattgtac 14393574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 41 - 128
Target Start/End: Original strand, 31764405 - 31764492
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagtttt 128  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||||||| |  |||| |||||||||||||||||    
T  31764405 attttctcaaagtttgttgtatccaaaaaatatgtatctttagttaagaactatacgaaaagtatctaagaaattgtacctaagtttt 31764492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 41 - 134
Target Start/End: Complemental strand, 4238945 - 4238850
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaa--tatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctccaa 134  Q
    ||||||||||||||||||||||||||||||  |||||||||||| || |||||||||| |||||||| ||| |||||||| |||| ||||||||||    
T  4238945 attttctcaaagtttgttatatccaaaaaaaatatgtatttttaattgagaaccatacaaaaagcacataaagaattgtatctaaattttctccaa 4238850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 74 - 131
Target Start/End: Original strand, 7808722 - 7808779
Alignment:
Q  74 gtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctc 131  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  7808722 gtatttttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctc 7808779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 75 - 132
Target Start/End: Complemental strand, 11687200 - 11687143
Alignment:
Q  75 tatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  11687200 tatttttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttctcc 11687143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 21379994 - 21379941
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  21379994 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcc 21379941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 8091180 - 8091233
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  8091180 tttagttaagaaccatacgaaaagcacctaagcaattgtacctaagttttctcc 8091233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 15546750 - 15546803
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  15546750 tttaattaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcc 15546803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 40 - 128
Target Start/End: Complemental strand, 4076724 - 4076637
Alignment:
Q  40 tattttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagtttt 128  Q
    |||||||||| ||||||||||  | |||||||||||| ||||| |||||||||||||||||| || |||| |||||||| |||||||||    
T  4076724 tattttctcatagtttgttatgccaaaaaaatatgtagttttaattaagaaccatacgaaaaacatttaaagaattgta-ctaagtttt 4076637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 54 - 130
Target Start/End: Complemental strand, 17279602 - 17279526
Alignment:
Q  54 ttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttct 130  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||||  || |||| |||||||  ||||||||||    
T  17279602 ttgttatattcaaaaaatatgtatttttaattaagaaccatacgaaaaatacctaagaaattgtagataagttttct 17279526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 79 - 142
Target Start/End: Original strand, 14393682 - 14393745
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctccaacataatat 142  Q
    |||||||||||||||||| |||||||| ||||||||| |||||||||||||||| | |||||||    
T  14393682 tttagttaagaaccatacaaaaagcacctaaggaattatacctaagttttctcctaaataatat 14393745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 885503 - 885556
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||||||||||| |||| ||||||||| ||||||||||||||||||||||||||    
T  885503 tttagttaagaatcataggaaaagcacctaaggaattgtacctaagttttctcc 885556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 63 - 128
Target Start/End: Original strand, 4179128 - 4179192
Alignment:
Q  63 ccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagtttt 128  Q
    |||||||||||||| |||||||||||||||||||||||| || |||| |||||||| |||||||||    
T  4179128 ccaaaaaatatgtagttttagttaagaaccatacgaaaaacatttaaagaattgta-ctaagtttt 4179192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 4890533 - 4890480
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||| ||| |||| |||||||||||||||||||||    
T  4890533 tttagttaagaaccatacgaaaaacacctaagaaattgtacctaagttttctcc 4890480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 6433743 - 6433690
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||||||| |||| |||| ||||||||||||||||    
T  6433743 tttagttaagaaccatacgaaaagcacctaagaaattatacctaagttttctcc 6433690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 81 - 133
Target Start/End: Complemental strand, 17367115 - 17367063
Alignment:
Q  81 tagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcca 133  Q
    |||||||||| ||||||||||| || |||||||||||||||||||||||||||    
T  17367115 tagttaagaatcatacgaaaagaacataaggaattgtacctaagttttctcca 17367063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 74 - 133
Target Start/End: Original strand, 20501819 - 20501877
Alignment:
Q  74 gtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcca 133  Q
    |||||||||||||||||||||||||||||||| |||| ||||||| ||||||||| ||||    
T  20501819 gtatttttagttaagaaccatacgaaaagcacctaagaaattgta-ctaagttttttcca 20501877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 79 - 133
Target Start/End: Complemental strand, 18998169 - 18998116
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcca 133  Q
    |||||||||||||  |||||||| ||| |||||||||||||||||||||||||||    
T  18998169 tttagttaagaacg-tacgaaaaacacctaaggaattgtacctaagttttctcca 18998116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 13172627 - 13172574
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||| ||  ||  ||||||||||||||||||||||    
T  13172627 tttagttaagaaccatacgaaaaacatctagagaattgtacctaagttttctcc 13172574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 13439814 - 13439867
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||| ||| |  | |||||||||||||||||||||    
T  13439814 tttagttaagaaccatacgaaaaacacctgcgtaattgtacctaagttttctcc 13439867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 128
Target Start/End: Original strand, 29609119 - 29609168
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagtttt 128  Q
    ||||||||| ||||||||||||||||  ||||||||||||| ||||||||    
T  29609119 tttagttaaaaaccatacgaaaagcatctaaggaattgtacgtaagtttt 29609168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 128
Target Start/End: Original strand, 1681142 - 1681230
Alignment:
Q  41 attttctcaaagtttgttat-atccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagtttt 128  Q
    |||||||||||||||||||| |||  ||||| |||| |||| ||||||||| |||||||||| ||| ||  ||| || |||||||||||    
T  1681142 attttctcaaagtttgttattatcacaaaaaaatgtcttttaagttaagaatcatacgaaaaacacctacagaaatgcacctaagtttt 1681230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 127
Target Start/End: Original strand, 4238972 - 4239020
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttt 127  Q
    |||| ||||||||||||| ||||||||  ||||||||||||||||||||    
T  4238972 tttaattaagaaccatacaaaaagcacagaaggaattgtacctaagttt 4239020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 133
Target Start/End: Original strand, 34522340 - 34522431
Alignment:
Q  41 attttctcaaagtttgttatatcc-aaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcca 133  Q
    ||||||| |||||||||||||||| ||||||| | || |||||||||||||| | |  |||||| | ||| |||||| ||||||||||| ||||    
T  34522340 attttcttaaagtttgttatatccaaaaaaatctttaattttagttaagaacaaaa--aaaagcgcctaaagaattgcacctaagttttatcca 34522431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 41 - 90
Target Start/End: Original strand, 12831764 - 12831813
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaa 90  Q
    |||||||||||||||||| ||  || |||||||||||||||| |||||||    
T  12831764 attttctcaaagtttgttctagtcacaaaatatgtatttttatttaagaa 12831813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 123
Target Start/End: Original strand, 3369103 - 3369147
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaa 123  Q
    |||||||| |||| ||||||||||||| ||| |||||||||||||    
T  3369103 tttagttaggaacgatacgaaaagcacctaacgaattgtacctaa 3369147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 80; Significance: 1e-37; HSPs: 2)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 51154 - 51063
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  51154 attttctcaaagtttgttatatccaaaaaatatatatttttagttaagaaccatacgaaaaggacctaaggaattgtacctaagttttctcc 51063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 51181 - 51234
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||| |||||| || ||||||||||||||||||||||||||    
T  51181 tttagttaagaaccatatgaaaagtacctaaggaattgtacctaagttttctcc 51234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 80; Significance: 1e-37; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 29781039 - 29781130
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||||||||||    
T  29781039 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcatctaaggaattggacctaagttttctcc 29781130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 37114329 - 37114239
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctc 131  Q
    ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||    
T  37114329 attttctcaaagtttattatatccaaaaaatatgtatttttaattaagaaccatacgaaaagcacctaaggaattgtacctaagttttctc 37114239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 8210414 - 8210323
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  8210414 attttctcaaagtttgttatatccaaaaaatatatatatttagttaagaatcatacgaaaagcacctaaggaattgtacctaagttttctcc 8210323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 41 - 134
Target Start/End: Original strand, 24211358 - 24211451
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctccaa 134  Q
    ||||||||| ||||||||||||| ||||||||||||||| || |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  24211358 attttctcatagtttgttatatctaaaaaatatgtatttctatttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctccaa 24211451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 38520109 - 38520018
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||| ||||||| ||||||||    
T  38520109 attttctcaaagtttgttatatccaaaaaatatatatttttagttaagaaccatacgaaaagcaactaaggaattatacctaaattttctcc 38520018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 38629565 - 38629474
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||| ||||||||    
T  38629565 attttctcaaagtttattatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcatttaaagaattgtacttaaattttctcc 38629474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 33100725 - 33100815
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctc 131  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||||| |||| ||||||||||||||||||||    
T  33100725 attttctcaaagtttgttatatcaaaaaaatatgtttttttagttaagaaccgtacgaaaagcacataagaaattgtacctaagttttctc 33100815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 44 - 132
Target Start/End: Complemental strand, 15882289 - 15882200
Alignment:
Q  44 ttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  15882289 ttctcaaagttagttatatccaaaaaaatatgtatttttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctcc 15882200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 12234558 - 12234466
Alignment:
Q  41 attttctcaaagttt-gttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  || ||||| ||||||||||||||||    
T  12234558 attttctcaaagttttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacccaaagaattatacctaagttttctcc 12234466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 4035832 - 4035741
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||||||| | ||||| ||||||||||||||||||    
T  4035832 attttctcaaaatttgttatatccaaaaaatatatatttttagttaagtaccatacgaaaagcacctgaggaactgtacctaagttttctcc 4035741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 23940884 - 23940976
Alignment:
Q  41 attttctcaaagtttgttatatccaaaa-aatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||  |||| ||||||||||||||||||| ||||||||||||||||| |||||||||||| |||||||||||||    
T  23940884 attttctcaaagtttgttatatttaaaaaaatatgtatttttagttaaaaaccatacgaaaagcacctaaggaattgtaactaagttttctcc 23940976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 17426708 - 17426801
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgta--tttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||||||||||||||||||||||||||||| || ||  ||||||||||||||||||||||||||||| |||  |||||||||||||||||||||    
T  17426708 attttctcaaagtttgttatatccaaaaaaaatatacatttttagttaagaaccatacgaaaagcacctaaaaaattgtacctaagttttctcc 17426801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 33 - 132
Target Start/End: Original strand, 11828668 - 11828774
Alignment:
Q  33 aatccagtattttctcaaagtttgttatatccaa-------aaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagt 125  Q
    |||||| |||||||||||||||||||||||| ||       ||||||||||||||||||||||||| ||| ||||||||  |||||||||||||||||||    
T  11828668 aatccattattttctcaaagtttgttatatctaacaaaaaaaaaatatgtatttttagttaagaacgatatgaaaagcaagtaaggaattgtacctaagt 11828767  T
Q  126 tttctcc 132  Q
    |||||||    
T  11828768 tttctcc 11828774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 41 - 101
Target Start/End: Complemental strand, 40891104 - 40891044
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaa 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  40891104 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccgtacgaaaa 40891044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 41 - 128
Target Start/End: Complemental strand, 38405230 - 38405142
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaat-atgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagtttt 128  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| ||||| |||||   |||||||||||| ||||    
T  38405230 attttctcaaagtttgttatatccaaaaaaagatgtatttttagttaagaaccatacaaaaagtacttacataattgtacctaaatttt 38405142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 74 - 133
Target Start/End: Complemental strand, 33100703 - 33100644
Alignment:
Q  74 gtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcca 133  Q
    |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  33100703 gtatttttagttaagaaccatacgaaaagcacctaagaaattgtacctaagttttctcca 33100644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 15882319 - 15882372
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  15882319 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcc 15882372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 10778745 - 10778686
Alignment:
Q  44 ttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagc 103  Q
    |||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||    
T  10778745 ttctcaaagtttgttatagccacaaaaaatgtatttttagttaagaaccatacgaaaagc 10778686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 79 - 130
Target Start/End: Original strand, 40891131 - 40891182
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttct 130  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  40891131 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 40891182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 41 - 95
Target Start/End: Original strand, 4262056 - 4262110
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccata 95  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  4262056 attttctcaaagtttgttatattcaaaaaatatgtatttttaattaagaaccata 4262110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 40393814 - 40393748
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcactt 107  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||||||| |||| ||||| |||||    
T  40393814 attttctcaaaatttgttatatcccaaaaatatgtatttttagttaagaatcataagaaaaacactt 40393748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 17426681 - 17426628
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  17426681 tttagttaagaaccatacgaaaagcacctaatgaattgtacctaagttttctcc 17426628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 79 - 128
Target Start/End: Complemental strand, 24741876 - 24741827
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagtttt 128  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  24741876 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagtttt 24741827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 38520136 - 38520189
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  38520136 tttagttaaaaaacatacgaaaagcacttaaggaattgtacctaagttttctcc 38520189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 38629592 - 38629645
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  38629592 tttagttaagaaccatacgaaaaacacctaaggaattgtacctaagttttctcc 38629645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 41 - 128
Target Start/End: Complemental strand, 35467261 - 35467175
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagtttt 128  Q
    ||||||| |||||||||||  ||||||||| |||||||||||||||||||||| || ||||| |  ||| ||||||||||||||||||    
T  35467261 attttcttaaagtttgttac-tccaaaaaagatgtatttttagttaagaaccacacaaaaagtatctaaagaattgtacctaagtttt 35467175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 79 - 128
Target Start/End: Complemental strand, 14834725 - 14834676
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagtttt 128  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  14834725 tttagttaagaaccatacgaaaagcacgtaaggaattgtacgtaagtttt 14834676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 23940857 - 23940804
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||||||||||| ||||||||||||||||||| ||||||||| |||||||||||    
T  23940857 tttagttaagaatcatacgaaaagcacttaagaaattgtaccgaagttttctcc 23940804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 24211331 - 24211278
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||| |||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  24211331 tttaattaagaaccatacgaaaagcacctaaagaattgtacctaagttttctcc 24211278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 79 - 128
Target Start/End: Original strand, 35467288 - 35467337
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagtttt 128  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  35467288 tttagttaagaaccatacgaaaagcacataaggaattgtacgtaagtttt 35467337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 65 - 131
Target Start/End: Original strand, 5356228 - 5356294
Alignment:
Q  65 aaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctc 131  Q
    |||||||||||||||||| ||||||| |||||||||| ||| || | ||||||| ||||||||||||    
T  5356228 aaaaaatatgtatttttaattaagaatcatacgaaaaacacctacgaaattgtatctaagttttctc 5356294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 79 - 133
Target Start/End: Complemental strand, 29781012 - 29780958
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcca 133  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||| |||| ||||    
T  29781012 tttagttaaaaaccatacgaaaagcacctaaggaattgtacctaaattttatcca 29780958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 12234585 - 12234638
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||| ||||||||||||||||  |||| |||||||||||||||||||||    
T  12234585 tttagttaataaccatacgaaaagcatctaagaaattgtacctaagttttctcc 12234638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 14834755 - 14834838
Alignment:
Q  47 tcaaagtttgttatatccaaaaaatatgtatttttagtt--aagaaccatacgaaaagcacttaaggaattgtacctaagtttt 128  Q
    |||||||||||||||| ||||||| ||||||||||||||  || |||| ||||||||| || ||  ||||||||| ||||||||    
T  14834755 tcaaagtttgttatatacaaaaaagatgtatttttagttaaaaaaaccgtacgaaaagtacctagagaattgtacttaagtttt 14834838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 41 - 133
Target Start/End: Original strand, 24741903 - 24741995
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcca 133  Q
    ||||||||| ||||| |||||| ||| | |  ||||||||||||||||||||||||||||| ||| | | |||||||||| || |||| ||||    
T  24741903 attttctcagagtttattatatgcaacataggtgtatttttagttaagaaccatacgaaaatcacctcaagaattgtacccaaattttgtcca 24741995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 73 - 133
Target Start/End: Original strand, 38515616 - 38515676
Alignment:
Q  73 tgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcca 133  Q
    |||||||||| |||| ||||| |||||| |||  |||||||||||||||||||||||||||    
T  38515616 tgtatttttaattaaaaaccacacgaaatgcatctaaggaattgtacctaagttttctcca 38515676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 119
Target Start/End: Complemental strand, 4262029 - 4261989
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtac 119  Q
    ||||||||||||||||||||||||||| ||| |||||||||    
T  4262029 tttagttaagaaccatacgaaaagcacctaaagaattgtac 4261989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 97
Target Start/End: Original strand, 25265966 - 25265998
Alignment:
Q  65 aaaaaatatgtatttttagttaagaaccatacg 97  Q
    |||||||||||||||||||||||||||| ||||    
T  25265966 aaaaaatatgtatttttagttaagaaccgtacg 25265998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 128
Target Start/End: Complemental strand, 33390737 - 33390652
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagtttt 128  Q
    |||||||||||||| |||||| ||| |||||  ||||||||||||||||| ||| | |||| ||  ||| ||| |||||| |||||||    
T  33390737 attttctcaaagttcgttataaccacaaaat--gtatttttagttaagaatcatgcaaaaaacaggtaaagaaatgtacccaagtttt 33390652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 80; Significance: 1e-37; HSPs: 57)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 1138650 - 1138559
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || ||||||||||||||||||||||    
T  1138650 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcaccaaaagaattgtacctaagttttctcc 1138559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 15855934 - 15855843
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  15855934 attttctcaaagtttgttatatcaaaaaaatatgtatttttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttctcc 15855843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 35420692 - 35420783
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  35420692 attttctcaaagtttgttatatcaaaaaaatatgtatttttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttctcc 35420783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 41 - 130
Target Start/End: Original strand, 24397325 - 24397415
Alignment:
Q  41 attttctcaaagtttgttatatccaaaa-aatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttct 130  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  24397325 attttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 24397415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 41 - 128
Target Start/End: Complemental strand, 16473046 - 16472959
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagtttt 128  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  16473046 attttctcaaagtttgttatatcaaaaaaatatgtatttttagttaagaaccatacgaaaagcatctaaggaattgtacctaagtttt 16472959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 21259810 - 21259901
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||||||||||||||||| ||||||||    
T  21259810 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccataagaaaagtacctaaggaattgtacctaaattttctcc 21259901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 4266073 - 4265982
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||    
T  4266073 attttcttaaagtttgttacatccaaaaaatatgtatttttagttaagaaccatacgaaaaacacctaagaaattgtacctaagttttctcc 4265982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 41 - 133
Target Start/End: Original strand, 13754371 - 13754463
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcca 133  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| ||| |||| |||||||| ||| |||||||||    
T  13754371 attttctcaaagtttgctatatcaaaaaaatatgtatttttagttaagaaccatacgaaaaacacctaagtaattgtacataaattttctcca 13754463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 41 - 105
Target Start/End: Complemental strand, 21262034 - 21261970
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcac 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21262034 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcac 21261970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 20476522 - 20476431
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||  ||  ||||||||||||||||||||||    
T  20476522 attttctcaaaatttgttatatcacaaaaatatgtatttttagttaagaaccatacgaaaagcatctagagaattgtacctaagttttctcc 20476431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 43539198 - 43539108
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||  || |||| ||||||| |||||||||||||    
T  43539198 attttctcaaagtttgttatatccaaaaaatatgtatttatagttcagaaccatacgaaaaatacctaagaaattgta-ctaagttttctcc 43539108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 33629425 - 33629518
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtat--ttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||||||||||||| |||  ||||||||||||| |||||||||| ||  ||||||||||||||||| ||||||||    
T  33629425 attttctcaaagtttgttatatccaaaaaatatatatatttttagttaagaatcatacgaaaaacatctaaggaattgtacctaaattttctcc 33629518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 45 - 128
Target Start/End: Original strand, 8364714 - 8364797
Alignment:
Q  45 tctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagtttt 128  Q
    |||||||||||||||| || ||||||  | |||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  8364714 tctcaaagtttgttatgtctaaaaaaattatatttttagttaagaaccatacaaaaagcacctaaggaattgtacctaagtttt 8364797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 12808002 - 12807912
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||| |||| |||||||  ||||||||||||    
T  12808002 attttttcaaagtttgttatatctaaaaaatatgtatttttagttaaaaaccatacgaaaaacacctaagaaattgta-ttaagttttctcc 12807912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 49 - 133
Target Start/End: Original strand, 1164883 - 1164968
Alignment:
Q  49 aaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcca 133  Q
    ||||||| |||||||||||||| ||| |||||||| |||||||||||||||||||||  ||||||||||||||||| |||||||||    
T  1164883 aaagtttattatatccaaaaaaatatttatttttaattaagaaccatacgaaaagcagctaaggaattgtacctaaattttctcca 1164968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 41 - 133
Target Start/End: Original strand, 37552388 - 37552474
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcca 133  Q
    ||||||||||||||||||||| | |||||||||||||||||||| ||||||||||| |||||||      |||||||||||||||||||||||    
T  37552388 attttctcaaagtttgttataacaaaaaaatatgtatttttagtcaagaaccatacaaaaagca------gaattgtacctaagttttctcca 37552474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 41 - 133
Target Start/End: Original strand, 37655232 - 37655317
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcca 133  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||||||||||| |||||||      |||||||||||||||||||||||    
T  37655232 attttctcaaagtttgttataac-aaaaaatatgtatttttagttaagaaccatacaaaaagca------gaattgtacctaagttttctcca 37655317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 1456102 - 1456158
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacg 97  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  1456102 attttctcaaagtttgttatatccaaaaaatatgtatttttagtcaagaaccatacg 1456158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 41 - 101
Target Start/End: Complemental strand, 12744917 - 12744857
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaa 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  12744917 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaaaaaccatacaaaaa 12744857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 75 - 134
Target Start/End: Original strand, 15855957 - 15856016
Alignment:
Q  75 tatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctccaa 134  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  15855957 tatttttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttctccaa 15856016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 49 - 128
Target Start/End: Complemental strand, 35807018 - 35806939
Alignment:
Q  49 aaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagtttt 128  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||| ||| ||||||||| ||| ||||    
T  35807018 aaagtttgttatattcaaaaaagatgtatttttagttaagaaccatatgaaaagcacctaaagaattgtacttaaatttt 35806939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 16473069 - 16473127
Alignment:
Q  75 tatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcca 133  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  16473069 tatttttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttctcca 16473127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 20476549 - 20476602
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  20476549 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcc 20476602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 75 - 132
Target Start/End: Complemental strand, 35420669 - 35420612
Alignment:
Q  75 tatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  35420669 tatttttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttctcc 35420612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 79 - 134
Target Start/End: Complemental strand, 21591266 - 21591211
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctccaa 134  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  21591266 tttagttcacaaccatacgaaaagcacttaaggaattgtacctaagttttctccaa 21591211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 79 - 134
Target Start/End: Complemental strand, 21595383 - 21595328
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctccaa 134  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  21595383 tttagttcacaaccatacgaaaagcacttaaggaattgtacctaagttttctccaa 21595328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 41 - 128
Target Start/End: Complemental strand, 18236559 - 18236470
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaata--tgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagtttt 128  Q
    ||||| |||||||||||||||||||||||| |  ||||||||||| |||||| |||| ||||||||  |||| |||||||||||||||||    
T  18236559 attttttcaaagtttgttatatccaaaaaaaaattgtatttttagctaagaatcataggaaaagcagctaagaaattgtacctaagtttt 18236470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 33629398 - 33629345
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  33629398 tttagttaagaaccataccaaaagcacataaggaattgtacctaagttttctcc 33629345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 19976353 - 19976261
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||| | |||||||||||| || |||||||||||||||||||||||||||| ||| |||  |||| ||  ||||||||||||    
T  19976353 attttctcaaagtttatcatatccaaaaaaatacgtatttttagttaagaaccatacgaaaatcacataaaaaattatagttaagttttctcc 19976261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 79 - 139
Target Start/End: Complemental strand, 32623268 - 32623208
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctccaacataa 139  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||| ||||| ||||    
T  32623268 tttagttaagaaccatacgaaaaacacctaaggaattgtacctaagttttttccaaaataa 32623208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 42 - 101
Target Start/End: Complemental strand, 12191482 - 12191423
Alignment:
Q  42 ttttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaa 101  Q
    |||||| |||||||||||||||||||||||||||| ||||| ||||||||||||| ||||    
T  12191482 ttttcttaaagtttgttatatccaaaaaatatgtaattttatttaagaaccatacaaaaa 12191423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 41 - 128
Target Start/End: Original strand, 42522900 - 42522987
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagtttt 128  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||||| || |||| ||| |||  |||| || |||||||||    
T  42522900 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaaccaaacaaaaaacacctaaaaaattatatctaagtttt 42522987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 1138677 - 1138730
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||||||  || |||||||||||||||||||||||    
T  1138677 tttagttaagaaccatacgaaaagcagctatggaattgtacctaagttttctcc 1138730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 77 - 130
Target Start/End: Original strand, 2255578 - 2255631
Alignment:
Q  77 tttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttct 130  Q
    ||||||||||||||||| ||||||||||| ||| ||||||||||||||||||||    
T  2255578 tttttagttaagaaccacacgaaaagcacctaaagaattgtacctaagttttct 2255631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 41 - 126
Target Start/End: Complemental strand, 2538487 - 2538402
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagtt 126  Q
    ||||||||| ||||||||||| ||| ||||| |||||||| |||| ||||| |||| |||||||| ||||||| || |||||||||    
T  2538487 attttctcagagtttgttataaccagaaaatgtgtattttaagttgagaacgatacaaaaagcacataaggaaatgcacctaagtt 2538402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 4266100 - 4266153
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||| ||| |||||||||||||| |||||||||||    
T  4266100 tttagttaagaaccatacgaaaaacacctaaggaattgtaccgaagttttctcc 4266153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 13754344 - 13754291
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||||||||||| |||||||||| ||| ||||||||||||||||||||||||||    
T  13754344 tttagttaagaatcatacgaaaaacacataaggaattgtacctaagttttctcc 13754291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 134
Target Start/End: Complemental strand, 2268226 - 2268170
Alignment:
Q  78 ttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctccaa 134  Q
    ||||| ||||||||||||| |||| ||||||||||||||||||||| ||||||||||    
T  2268226 ttttaattaagaaccatacaaaaaacacttaaggaattgtacctaatttttctccaa 2268170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 41 - 95
Target Start/End: Complemental strand, 735367 - 735313
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccata 95  Q
    |||||||||||||||||||||| ||| ||||||||||||||| ||||||| ||||    
T  735367 attttctcaaagtttgttatattcaagaaatatgtatttttaattaagaatcata 735313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 79 - 129
Target Start/End: Original strand, 12808029 - 12808079
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttc 129  Q
    |||||| ||||| |||||||||| |||||||||||||||||||||||||||    
T  12808029 tttagtcaagaatcatacgaaaaacacttaaggaattgtacctaagttttc 12808079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 43539225 - 43539278
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||||||||| |||||||||||| ||| ||||||||||||||||| ||||||||    
T  43539225 tttagttaaggaccatacgaaaaacacctaaggaattgtacctaaattttctcc 43539278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 780915 - 780959
Alignment:
Q  84 ttaagaaccatacgaaaagcacttaaggaattgtacctaagtttt 128  Q
    |||||||||||||||||||||| |||| |||||||||||||||||    
T  780915 ttaagaaccatacgaaaagcacctaagaaattgtacctaagtttt 780959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 132
Target Start/End: Original strand, 17583367 - 17583410
Alignment:
Q  89 aaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||| |||| |||||||||||||||||||||    
T  17583367 aaccatacgaaaagcacctaagaaattgtacctaagttttctcc 17583410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 132
Target Start/End: Complemental strand, 21259777 - 21259730
Alignment:
Q  85 taagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||| ||| ||||||||| ||||||||||||    
T  21259777 taagaaccatacgaaaagcacataaagaattgtacgtaagttttctcc 21259730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 79 - 133
Target Start/End: Original strand, 2268723 - 2268777
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcca 133  Q
    |||||||||||||||||| |||||||  |||| |||| |||||||||||||||||    
T  2268723 tttagttaagaaccatacaaaaagcatctaagaaattatacctaagttttctcca 2268777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 82
Target Start/End: Complemental strand, 2268713 - 2268672
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtattttta 82  Q
    |||| ||||||||||||||||| |||||||||||||||||||    
T  2268713 atttcctcaaagtttgttatattcaaaaaatatgtattttta 2268672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 128
Target Start/End: Original strand, 10132372 - 10132421
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagtttt 128  Q
    |||||||||||||||||| |||| ||| |||||||||||| |||||||||    
T  10132372 tttagttaagaaccatacaaaaaacacataaggaattgtatctaagtttt 10132421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 129
Target Start/End: Original strand, 25751570 - 25751619
Alignment:
Q  80 ttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttc 129  Q
    |||||||||||||| ||||||||||| |||  ||||||||||||||||||    
T  25751570 ttagttaagaaccacacgaaaagcacctaaaaaattgtacctaagttttc 25751619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 128
Target Start/End: Original strand, 35276359 - 35276460
Alignment:
Q  28 tatctaatccagtattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagtt 126  Q
    |||| ||||||  ||||||| ||||||| ||||||| |||||| | ||||||||||| ||||||| |||| |||||||  |||  ||||||| |||||||    
T  35276359 tatcaaatccataattttcttaaagtttattatatctaaaaaaatgtgtatttttaggtaagaactatacaaaaagcatctaataaattgtatctaagtt 35276458  T
Q  127 tt 128  Q
    ||    
T  35276459 tt 35276460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 37552361 - 37552308
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||||||||||||| ||| ||||||||  || ||||||||||||||||||||||    
T  37552361 tttagttaagaaccgtacaaaaagcacggaatgaattgtacctaagttttctcc 37552308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 132
Target Start/End: Complemental strand, 29141853 - 29141805
Alignment:
Q  84 ttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||||||||||||||||| ||| |||| ||||||| |||||||||||||    
T  29141853 ttaagaaccatacgaaaaacacctaagcaattgtatctaagttttctcc 29141805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 57 - 128
Target Start/End: Complemental strand, 10132357 - 10132286
Alignment:
Q  57 ttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagtttt 128  Q
    |||||||||||||| || |||||||| ||||||||||||| |||| ||  |||  ||||||| |||||||||    
T  10132357 ttatatccaaaaaagatatatttttaattaagaaccatacaaaaaacatataaaaaattgtatctaagtttt 10132286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 117
Target Start/End: Complemental strand, 20464053 - 20464014
Alignment:
Q  78 ttttagttaagaaccatacgaaaagcacttaaggaattgt 117  Q
    ||||||||||||||||||| |||||||| |||||||||||    
T  20464053 ttttagttaagaaccatacaaaaagcacctaaggaattgt 20464014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 129
Target Start/End: Original strand, 12744944 - 12744994
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttc 129  Q
    |||||| || || |||||||||| ||| |||||||||||||||||||||||    
T  12744944 tttagtcaaaaatcatacgaaaaacacctaaggaattgtacctaagttttc 12744994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 79 - 120
Target Start/End: Original strand, 2529099 - 2529140
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacc 120  Q
    ||||||||||||||| ||||||||||| |||| |||||||||    
T  2529099 tttagttaagaaccacacgaaaagcacctaagaaattgtacc 2529140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 79 - 128
Target Start/End: Original strand, 4913267 - 4913316
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagtttt 128  Q
    |||||||||||||||||| |||| ||| |||| |||||||| ||||||||    
T  4913267 tttagttaagaaccatacaaaaaacacctaagaaattgtacgtaagtttt 4913316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 29141863 - 29141907
Alignment:
Q  84 ttaagaaccatacgaaaagcacttaaggaattgtacctaagtttt 128  Q
    |||||||||||||||||||||| || ||| |||||||||| ||||    
T  29141863 ttaagaaccatacgaaaagcacctatggagttgtacctaattttt 29141907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 72; Significance: 6e-33; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 72351 - 72441
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | |||||||||||||    
T  72351 attttctcagagtttgttatatccaaaaaatatgtatttttagttaaaaaccatacgaaaagcacttaaggaattgca-ctaagttttctcc 72441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 134
Target Start/End: Complemental strand, 72341 - 72286
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctccaa 134  Q
    ||||| |||||| ||||| |||||||  |||||||||||||||||||| |||||||    
T  72341 tttagctaagaatcatacaaaaagcatctaaggaattgtacctaagttctctccaa 72286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0653 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0653
Description:

Target: scaffold0653; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 3473 - 3564
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||| ||||||||||||| ||||||||    
T  3473 attttatcaaagtttgttatatccaaaaaatatgtatttttatttaagaaccatacgaaaagtacctaaagaattgtacctaaattttctcc 3564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0653; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 134
Target Start/End: Complemental strand, 3446 - 3391
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctccaa 134  Q
    |||| ||||||||||||| ||||||||  || ||||||||||||||||||||||||    
T  3446 tttaattaagaaccatacaaaaagcaccaaatgaattgtacctaagttttctccaa 3391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0595 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0595
Description:

Target: scaffold0595; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 53 - 132
Target Start/End: Complemental strand, 5780 - 5701
Alignment:
Q  53 tttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||    
T  5780 tttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaagaattgtaccttagttttctcc 5701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0595; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 5823 - 5878
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaagg--aattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||||||| |||||  |||||||||||||||||||||    
T  5823 tttagttaagaaccatacgaaaagcacctaaggaaaattgtacctaagttttctcc 5878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 7177 - 7086
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||||| |||||||||| ||| ||||||||||||||||| ||||||||    
T  7177 attttctcaaagtttgttatatccaaaatatatatatttttagttaagaatcatacgaaaaacacctaaggaattgtacctaaattttctcc 7086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 7204 - 7257
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||||||||||||||| |||||||| |||||||| ||||||||    
T  7204 tttagttaagaaccatacgaaaagcacctaaggaatcgtacctaaattttctcc 7257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 64; Significance: 4e-28; HSPs: 2)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 14533 - 14442
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||| |||||| ||||| ||| |||| |||||||||||||||||||||    
T  14533 attttctcaaagtctgttatatccaaataatatgtatttttagttaagtaccataggaaaaacacctaagaaattgtacctaagttttctcc 14442  T

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Target: scaffold0118; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 79 - 131
Target Start/End: Original strand, 14560 - 14612
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctc 131  Q
    ||||||||||||| |||||||||||||  ||||||||||||||||||||||||    
T  14560 tttagttaagaacgatacgaaaagcacccaaggaattgtacctaagttttctc 14612  T

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Target: scaffold0137 (Bit Score: 62; Significance: 6e-27; HSPs: 2)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 41 - 130
Target Start/End: Complemental strand, 10206 - 10118
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttct 130  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||| ||| ||||||||| ||||||||||||||    
T  10206 attttctcaaagtttgttatatccaaaaa-tatatatttttagttaagaaccatacgcaaaacacctaaggaattatacctaagttttct 10118  T

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Target: scaffold0137; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 10233 - 10286
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||| |||||||  ||||||||||||| |||| |||||||||||| ||||||||    
T  10233 tttacttaagaattatacgaaaagcacataagaaattgtacctaaattttctcc 10286  T

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Target: scaffold0163 (Bit Score: 61; Significance: 2e-26; HSPs: 2)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 2019 - 2111
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||||| |||||||||||||||| |||||| || ||||||||||||||||||||||  |||||||| ||||||||||||||||||||||||||    
T  2019 attttcacaaagtttgttatatctaaaaaaatacgtatttttagttaagaaccatataaaaagcacctaaggaattgtacctaagttttctcc 2111  T

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Target: scaffold0163; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 1992 - 1939
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    |||||||||||||||||| |||||||| |||  |||| ||||||| ||||||||    
T  1992 tttagttaagaaccatacaaaaagcacctaaacaattatacctaaattttctcc 1939  T

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Target: scaffold0086 (Bit Score: 60; Significance: 9e-26; HSPs: 2)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 41 - 128
Target Start/End: Complemental strand, 48217 - 48130
Alignment:
Q  41 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagtttt 128  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| |||  |||| ||| ||||||||    
T  48217 attttctcaaagtttgttatatccaaaaaatatgtatttttaattaaaaaccatacgaaaagcacctaaaaaattatacgtaagtttt 48130  T

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Target: scaffold0086; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 79 - 131
Target Start/End: Original strand, 48244 - 48296
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctc 131  Q
    ||||||||||||| ||||||||||||  |||||||||||| ||||||||||||    
T  48244 tttagttaagaactatacgaaaagcatctaaggaattgtatctaagttttctc 48296  T

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Target: scaffold0069 (Bit Score: 52; Significance: 5e-21; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 73 - 132
Target Start/End: Complemental strand, 26464 - 26405
Alignment:
Q  73 tgtatttttagttaagaaccatacgaaaagcacttaaggaattgtacctaagttttctcc 132  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  26464 tgtatttttagttaataaccatacgaaaagcacctaaggaattgtacctaagttttctcc 26405  T

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Target: scaffold0018 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 122
Target Start/End: Complemental strand, 138330 - 138287
Alignment:
Q  79 tttagttaagaaccatacgaaaagcacttaaggaattgtaccta 122  Q
    |||||||||||| |||||||||||| | ||||||||||||||||    
T  138330 tttagttaagaatcatacgaaaagctcctaaggaattgtaccta 138287  T

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Target: scaffold0013 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 95
Target Start/End: Complemental strand, 94276 - 94207
Alignment:
Q  28 tatctaatccagtattttctcaaagtttgttatatccaa--aaaatatgtatttttagttaagaaccata 95  Q
    |||| ||||||  ||||||||| ||||||||||||||||  ||||  ||||||||||||||| |||||||    
T  94276 tatcaaatccaaaattttctcatagtttgttatatccaatgaaaaggtgtatttttagttaaaaaccata 94207  T

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