View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14405_low_2 (Length: 383)
Name: NF14405_low_2
Description: NF14405
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14405_low_2 |
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Alignment Details
Target: chr7 (Bit Score: 308; Significance: 1e-173; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 22 - 366
Target Start/End: Original strand, 31721266 - 31721606
Alignment:
| Q |
22 |
actatcacattatccgcatgccgcaacacgactaagtacattataactgttgaacttgttaagtttcttgatcatgaaaaaattagtacttgggatgata |
121 |
Q |
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| T |
31721266 |
actatcacattatccgcatgccgcaacacgactaagtacattataactgttgaacttgttaagtttcttgatcatgaaaaaattagtacttgggatgata |
31721365 |
T |
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| Q |
122 |
tgttgaaatgagttcatgatgaagcaacgaaattaaggtttattatatattgttatgacaaaattagatcatgatttaaattagaagaaatcatacactt |
221 |
Q |
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| T |
31721366 |
tgttgaaatgagttcaagatgaagcaacgaaattaaggtttattat----tgttatgacaaaattagatcatgatttaaattagaagaaatcatacactt |
31721461 |
T |
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| Q |
222 |
gtattgggatgtgaattgaggggtataaccaaaaaatacaataaacaattaagacatatgatccataaaatgtaagtatctgttcaaattgcaacactat |
321 |
Q |
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| T |
31721462 |
gtattgggatgtgaattgaggggtataaacaaaaaatacaataaacaattaagacacatgatccataaaatgtaagtgtctgttcaaattgcaacactat |
31721561 |
T |
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| Q |
322 |
cttttgtattcaggtgtatgaaaagttaccgtaatgtgtgaaaag |
366 |
Q |
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| T |
31721562 |
cttttgtgttcaggtgtatgaaaagttaccgtaatgtgtgaaaag |
31721606 |
T |
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