View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14406_high_22 (Length: 273)

Name: NF14406_high_22
Description: NF14406
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14406_high_22
NF14406_high_22
[»] chr8 (1 HSPs)
chr8 (20-273)||(43745352-43745605)
[»] chr5 (3 HSPs)
chr5 (21-110)||(28220457-28220546)
chr5 (21-97)||(42555530-42555606)
chr5 (130-191)||(42554884-42554945)
[»] chr7 (16 HSPs)
chr7 (27-110)||(6790024-6790107)
chr7 (21-108)||(3147778-3147865)
chr7 (27-109)||(8647386-8647468)
chr7 (31-110)||(13333029-13333108)
chr7 (28-110)||(1301977-1302059)
chr7 (31-110)||(8585279-8585358)
chr7 (25-110)||(8629042-8629127)
chr7 (27-110)||(8640123-8640205)
chr7 (31-110)||(8659879-8659958)
chr7 (31-108)||(10493949-10494026)
chr7 (29-110)||(8582214-8582295)
chr7 (35-108)||(8654970-8655043)
chr7 (25-109)||(8667929-8668013)
chr7 (27-109)||(17268451-17268533)
chr7 (27-108)||(27830450-27830531)
chr7 (27-109)||(17260753-17260835)
[»] chr2 (9 HSPs)
chr2 (27-109)||(43625922-43626004)
chr2 (21-110)||(16657090-16657179)
chr2 (30-110)||(12235204-12235284)
chr2 (31-108)||(7542742-7542819)
chr2 (31-110)||(16661565-16661644)
chr2 (72-110)||(39373417-39373455)
chr2 (72-109)||(12258155-12258192)
chr2 (54-110)||(11999933-11999989)
chr2 (72-110)||(12244979-12245017)
[»] chr1 (4 HSPs)
chr1 (27-110)||(15595548-15595632)
chr1 (40-109)||(4678132-4678201)
chr1 (34-110)||(34466366-34466442)
chr1 (52-105)||(52549098-52549151)
[»] chr6 (1 HSPs)
chr6 (22-109)||(28911089-28911176)
[»] chr4 (3 HSPs)
chr4 (52-110)||(35132983-35133041)
chr4 (31-110)||(30775768-30775847)
chr4 (25-109)||(9335465-9335549)


Alignment Details
Target: chr8 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 20 - 273
Target Start/End: Original strand, 43745352 - 43745605
Alignment:
Q  20 atccggaaatgaccttgaacggccacaacttcatatcattttgaacatcagaatcattaaacttcctaccaattaacctcttagcatctgacnnnnnnnn 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||            
T  43745352 atccggaaatgaccttgaacggccacaacttcatatcattttgaacatcagaatcattaaacttcctaccaattaacctcttagcatctgacaaaaaaaa 43745451  T
Q  120 tgcatatcattaattatatatagtcattcaattgtccaactaacataccaatgcaatgatacaataataacannnnnnnnaagaaaacaaaagacacgag 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||| ||||||||||||||||    
T  43745452 tgcatatcattaattatatatagtcattcaattgtccaactaacataccaatgcaatgatacaataataacattttttttaagcaaacaaaagacacgag 43745551  T
Q  220 gtagccgaatgggaaagtcatcacaactaggttggcaccgctaacacaaacaaa 273  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  43745552 gtagccgaatgggaaagtaatcacaactagggtggcaccgctaacacaaacaaa 43745605  T

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Target: chr5 (Bit Score: 66; Significance: 3e-29; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 21 - 110
Target Start/End: Original strand, 28220457 - 28220546
Alignment:
Q  21 tccggaaatgaccttgaacggccacaacttcatatcattttgaacatcagaatcattaaacttcctaccaattaacctcttagcatctga 110  Q
    |||||||||||||||||| ||||||||||| ||||||| ||||||| |||| ||| ||||||||||||||||||||||||||||||||||    
T  28220457 tccggaaatgaccttgaatggccacaactttatatcatcttgaacaacagagtcactaaacttcctaccaattaacctcttagcatctga 28220546  T

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Target: chr5; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 42555606 - 42555530
Alignment:
Q  21 tccggaaatgaccttgaacggccacaacttcatatcattttgaacatcagaatcattaaacttcctaccaattaacc 97  Q
    |||||||||||||||||| |||||||||||||| |||||||||||| || |||||||||||||||||||||||||||    
T  42555606 tccggaaatgaccttgaatggccacaacttcatgtcattttgaacaacataatcattaaacttcctaccaattaacc 42555530  T

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Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 130 - 191
Target Start/End: Complemental strand, 42554945 - 42554884
Alignment:
Q  130 taattatatatagtcattcaattgtccaactaacataccaatgcaatgatacaataataaca 191  Q
    |||||||||||   |||||||||||||||||| |||| ||||||||||| ||||||||||||    
T  42554945 taattatatatgaccattcaattgtccaactagcatatcaatgcaatgaaacaataataaca 42554884  T

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Target: chr7 (Bit Score: 64; Significance: 5e-28; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 27 - 110
Target Start/End: Original strand, 6790024 - 6790107
Alignment:
Q  27 aatgaccttgaacggccacaacttcatatcattttgaacatcagaatcattaaacttcctaccaattaacctcttagcatctga 110  Q
    |||||||||||| ||||| ||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  6790024 aatgaccttgaatggccaaaacatcatatcattttgaacaacagaatcactaaacttcctaccaattaacctcttagcatctga 6790107  T

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Target: chr7; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 21 - 108
Target Start/End: Original strand, 3147778 - 3147865
Alignment:
Q  21 tccggaaatgaccttgaacggccacaacttcatatcattttgaacatcagaatcattaaacttcctaccaattaacctcttagcatct 108  Q
    |||| ||||||||||||| ||||||||| ||||||||||||||||| ||||||||  |||||||||||||||||||||||| ||||||    
T  3147778 tccgcaaatgaccttgaatggccacaacatcatatcattttgaacaacagaatcaccaaacttcctaccaattaacctctttgcatct 3147865  T

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Target: chr7; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 109
Target Start/End: Original strand, 8647386 - 8647468
Alignment:
Q  27 aatgaccttgaacggccacaacttcatatcattttgaacatcagaatcattaaacttcctaccaattaacctcttagcatctg 109  Q
    |||||||||||| |||||||||||| ||||||| |||||| ||||||||  |||||||||||| |||||||||||||||||||    
T  8647386 aatgaccttgaatggccacaacttcttatcattctgaacaacagaatcaaaaaacttcctaccgattaacctcttagcatctg 8647468  T

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Target: chr7; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 31 - 110
Target Start/End: Complemental strand, 13333108 - 13333029
Alignment:
Q  31 accttgaacggccacaacttcatatcattttgaacatcagaatcattaaacttcctaccaattaacctcttagcatctga 110  Q
    |||||||| ||||||||| | ||||||||||||||| | | |||| ||||||||||||||||||||||||||||||||||    
T  13333108 accttgaatggccacaacattatatcattttgaacaaccggatcactaaacttcctaccaattaacctcttagcatctga 13333029  T

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Target: chr7; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 28 - 110
Target Start/End: Original strand, 1301977 - 1302059
Alignment:
Q  28 atgaccttgaacggccacaacttcatatcattttgaacatcagaatcattaaacttcctaccaattaacctcttagcatctga 110  Q
    ||||||||||| ||||||||| |||| || ||||||||| | |||||| ||||||||||||||||||| ||||||||||||||    
T  1301977 atgaccttgaatggccacaacatcatgtctttttgaacaactgaatcactaaacttcctaccaattaatctcttagcatctga 1302059  T

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Target: chr7; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 110
Target Start/End: Complemental strand, 8585358 - 8585279
Alignment:
Q  31 accttgaacggccacaacttcatatcattttgaacatcagaatcattaaacttcctaccaattaacctcttagcatctga 110  Q
    |||||||| ||||||||| | ||||||||||||||| | | |||| ||||||||||||||||||||||||| ||||||||    
T  8585358 accttgaatggccacaacattatatcattttgaacaacgggatcactaaacttcctaccaattaacctcttggcatctga 8585279  T

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Target: chr7; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 8629042 - 8629127
Alignment:
Q  25 gaaatgaccttgaacggccacaacttcatatcattttgaacatcagaatcattaaacttcctaccaattaacctcttagcatctga 110  Q
    ||||| |||||||| ||||| ||| | ||||| ||||||||| ||| |||| ||||||||||||||||||||||||| ||||||||    
T  8629042 gaaataaccttgaatggccagaacatgatatccttttgaacaacaggatcactaaacttcctaccaattaacctcttggcatctga 8629127  T

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Target: chr7; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 27 - 110
Target Start/End: Complemental strand, 8640205 - 8640123
Alignment:
Q  27 aatgaccttgaacggccacaacttcatatcattttgaacatcagaatcattaaa-cttcctaccaattaacctcttagcatctga 110  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||| ||  ||| ||||||||||||||||  ||||||||||||    
T  8640205 aatgaccttgaatggccacaacttcatatcattttgaacaacagaaacaaaaaaccttcctaccaattaac--cttagcatctga 8640123  T

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Target: chr7; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 31 - 110
Target Start/End: Original strand, 8659879 - 8659958
Alignment:
Q  31 accttgaacggccacaacttcatatcattttgaacatcagaatcattaaacttcctaccaattaacctcttagcatctga 110  Q
    |||||||| ||||||||| |||| || ||||||||| | |||||| ||||||||||||||||||| ||||| ||||||||    
T  8659879 accttgaatggccacaacatcatgtctttttgaacaactgaatcactaaacttcctaccaattaatctctttgcatctga 8659958  T

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Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 31 - 108
Target Start/End: Complemental strand, 10494026 - 10493949
Alignment:
Q  31 accttgaacggccacaacttcatatcattttgaacatcagaatcattaaacttcctaccaattaacctcttagcatct 108  Q
    |||||||| ||||||||| | ||||| ||||||||| | | |||| |||||||||| |||||||||||||||||||||    
T  10494026 accttgaatggccacaacattatatcgttttgaacaaccggatcactaaacttcctgccaattaacctcttagcatct 10493949  T

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Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 110
Target Start/End: Original strand, 8582214 - 8582295
Alignment:
Q  29 tgaccttgaacggccacaacttcatatcattttgaacatcagaatcattaaacttcctaccaattaacctcttagcatctga 110  Q
    |||||||||| ||||||||||| ||||| |||||||||   |||||| || | ||||| |||||||||||||| ||||||||    
T  8582214 tgaccttgaagggccacaacttgatatccttttgaacaatggaatcactatatttccttccaattaacctctttgcatctga 8582295  T

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Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 108
Target Start/End: Original strand, 8654970 - 8655043
Alignment:
Q  35 tgaacggccacaacttcatatcattttgaacatcagaatcattaaacttcctaccaattaacctcttagcatct 108  Q
    |||| ||||||||| | ||||| |||||||||  || |||| || |||||||||||||||||||||||||||||    
T  8654970 tgaatggccacaacatgatatccttttgaacaataggatcactatacttcctaccaattaacctcttagcatct 8655043  T

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Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 109
Target Start/End: Original strand, 8667929 - 8668013
Alignment:
Q  25 gaaatgaccttgaacggccacaacttcatatcattttgaacatcagaatcattaaacttcctaccaattaacctcttagcatctg 109  Q
    ||||| |||||||| |||||||||   |||||  |||||||| | |  ||| |||||||||||||||||||||||||||||||||    
T  8667929 gaaataaccttgaatggccacaacaatatatctctttgaacaacggggtcactaaacttcctaccaattaacctcttagcatctg 8668013  T

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Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 109
Target Start/End: Original strand, 17268451 - 17268533
Alignment:
Q  27 aatgaccttgaacggccacaacttcatatcattttgaacatcagaatcattaaacttcctaccaattaacctcttagcatctg 109  Q
    |||||||||||| |||||| || | ||||| ||||| ||  ||| |||| ||||||||||||||||||  |||||||||||||    
T  17268451 aatgaccttgaatggccacgacattatatctttttggaccacaggatcactaaacttcctaccaattagtctcttagcatctg 17268533  T

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Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 108
Target Start/End: Complemental strand, 27830531 - 27830450
Alignment:
Q  27 aatgaccttgaacggccacaacttcatatcattttgaacatcagaatcattaaacttcctaccaattaacctcttagcatct 108  Q
    |||||| |||||  ||||||| || ||||| ||||||||| ||  |||  | ||||||||||||||||||||||||||||||    
T  27830531 aatgactttgaatagccacaagtttatatctttttgaacaacatcatcgctgaacttcctaccaattaacctcttagcatct 27830450  T

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Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 109
Target Start/End: Original strand, 17260753 - 17260835
Alignment:
Q  27 aatgaccttgaacggccacaacttcatatcattttgaacatcagaatcattaaacttcctaccaattaacctcttagcatctg 109  Q
    |||||||||||| |||||| || | ||||| ||||| ||  ||| |||| ||||||||||||||| ||  |||||||||||||    
T  17260753 aatgaccttgaatggccacgacattatatctttttggaccacaggatcactaaacttcctaccaactagtctcttagcatctg 17260835  T

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Target: chr2 (Bit Score: 55; Significance: 1e-22; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 109
Target Start/End: Original strand, 43625922 - 43626004
Alignment:
Q  27 aatgaccttgaacggccacaacttcatatcattttgaacatcagaatcattaaacttcctaccaattaacctcttagcatctg 109  Q
    ||||||| |||| ||||||||| | ||||||||||||||| |||||||| ||||||||||||| |||||||||||||||||||    
T  43625922 aatgaccctgaatggccacaacatgatatcattttgaacaacagaatcactaaacttcctaccgattaacctcttagcatctg 43626004  T

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Target: chr2; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 21 - 110
Target Start/End: Complemental strand, 16657179 - 16657090
Alignment:
Q  21 tccggaaatgaccttgaacggccacaacttcatatcattttgaacatcagaatcattaaacttcctaccaattaacctcttagcatctga 110  Q
    ||||| |||||||||||| ||||||||  | ||||||||||||||| ||| |||| ||||||||||||| |||||||| |||||||||||    
T  16657179 tccggcaatgaccttgaatggccacaagatgatatcattttgaacaacaggatcactaaacttcctaccgattaaccttttagcatctga 16657090  T

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Target: chr2; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 110
Target Start/End: Original strand, 12235204 - 12235284
Alignment:
Q  30 gaccttgaacggccacaacttcatatcattttgaacatcagaatcattaaacttcctaccaattaacctcttagcatctga 110  Q
    ||||||||| ||||||||| ||| ||||| ||||||| |   |||| ||||||||||||||||||||||||||||||||||    
T  12235204 gaccttgaatggccacaacatcacatcatcttgaacaacttgatcactaaacttcctaccaattaacctcttagcatctga 12235284  T

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Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 31 - 108
Target Start/End: Original strand, 7542742 - 7542819
Alignment:
Q  31 accttgaacggccacaacttcatatcattttgaacatcagaatcattaaacttcctaccaattaacctcttagcatct 108  Q
    |||||||| ||||| |||   ||||||| ||||||| ||| |||| ||||||||||||||||||||||||||||||||    
T  7542742 accttgaatggccataacagtatatcatcttgaacaacaggatcactaaacttcctaccaattaacctcttagcatct 7542819  T

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Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 110
Target Start/End: Complemental strand, 16661644 - 16661565
Alignment:
Q  31 accttgaacggccacaacttcatatcattttgaacatcagaatcattaaacttcctaccaattaacctcttagcatctga 110  Q
    ||||||||||||||||||   ||||| ||||||||| | |  ||| |||| |||||||||||||||||||||||||||||    
T  16661644 accttgaacggccacaacagtatatctttttgaacaacggggtcactaaatttcctaccaattaacctcttagcatctga 16661565  T

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Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 72 - 110
Target Start/End: Original strand, 39373417 - 39373455
Alignment:
Q  72 atcattaaacttcctaccaattaacctcttagcatctga 110  Q
    |||||||||||||||||||||||||||||||||||||||    
T  39373417 atcattaaacttcctaccaattaacctcttagcatctga 39373455  T

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Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 72 - 109
Target Start/End: Complemental strand, 12258192 - 12258155
Alignment:
Q  72 atcattaaacttcctaccaattaacctcttagcatctg 109  Q
    |||| |||||||||||||||||||||||||||||||||    
T  12258192 atcactaaacttcctaccaattaacctcttagcatctg 12258155  T

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Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 110
Target Start/End: Original strand, 11999933 - 11999989
Alignment:
Q  54 atcattttgaacatcagaatcattaaacttcctaccaattaacctcttagcatctga 110  Q
    ||||| ||||||| ||  |||| ||||||||| ||||||||||||||||||||||||    
T  11999933 atcatcttgaacaacaagatcactaaacttccaaccaattaacctcttagcatctga 11999989  T

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Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 110
Target Start/End: Complemental strand, 12245017 - 12244979
Alignment:
Q  72 atcattaaacttcctaccaattaacctcttagcatctga 110  Q
    |||| ||||||||||||||||||| ||||||||||||||    
T  12245017 atcactaaacttcctaccaattaatctcttagcatctga 12244979  T

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Target: chr1 (Bit Score: 49; Significance: 4e-19; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 27 - 110
Target Start/End: Original strand, 15595548 - 15595632
Alignment:
Q  27 aatgaccttgaacggccacaacttcatatcattttgaac-atcagaatcattaaacttcctaccaattaacctcttagcatctga 110  Q
    |||||||||||| ||||||||||| |||||||||||||| | |||||||| ||||||||||||  ||||| ||||||||||||||    
T  15595548 aatgaccttgaatggccacaactttatatcattttgaacaaacagaatcactaaacttcctactgattaatctcttagcatctga 15595632  T

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Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 109
Target Start/End: Complemental strand, 4678201 - 4678132
Alignment:
Q  40 ggccacaacttcatatcattttgaacatcagaatcattaaacttcctaccaattaacctcttagcatctg 109  Q
    ||||||||| | || || ||||||||| |||||||| || || |||||||||||||||||||||||||||    
T  4678201 ggccacaacatgatgtctttttgaacaacagaatcactatacctcctaccaattaacctcttagcatctg 4678132  T

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Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 34466442 - 34466366
Alignment:
Q  34 ttgaacggccacaacttcatatcattttgaacatcagaatcattaaacttcctaccaattaacctcttagcatctga 110  Q
    ||||| ||||| ||| |||||||  |||||||||||| |||| |||| || || |||||||||||||||||||||||    
T  34466442 ttgaatggccataacatcatatctgtttgaacatcaggatcactaaattttctgccaattaacctcttagcatctga 34466366  T

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Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 52 - 105
Target Start/End: Complemental strand, 52549151 - 52549098
Alignment:
Q  52 atatcattttgaacatcagaatcattaaacttcctaccaattaacctcttagca 105  Q
    ||||||| ||||||| ||| |||| |||||||| ||||||||||||||||||||    
T  52549151 atatcatcttgaacaacaggatcactaaacttcttaccaattaacctcttagca 52549098  T

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Target: chr6 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 109
Target Start/End: Original strand, 28911089 - 28911176
Alignment:
Q  22 ccggaaatgaccttgaacggccacaacttcatatcattttgaacatcagaatcattaaacttcctaccaattaacctcttagcatctg 109  Q
    |||| |||||||||||||||| ||||| |   ||| ||||||||| | | |||| ||||||||||| |||||| ||||||||||||||    
T  28911089 ccggcaatgaccttgaacggcgacaacattgaatcgttttgaacaacgggatcactaaacttcctatcaattatcctcttagcatctg 28911176  T

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Target: chr4 (Bit Score: 35; Significance: 0.0000000001; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 52 - 110
Target Start/End: Original strand, 35132983 - 35133041
Alignment:
Q  52 atatcattttgaacatcagaatcattaaacttcctaccaattaacctcttagcatctga 110  Q
    ||||||| |||||||  || |||| |||||||||||||||||||||| |||||||||||    
T  35132983 atatcatcttgaacaataggatcactaaacttcctaccaattaaccttttagcatctga 35133041  T

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Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 110
Target Start/End: Original strand, 30775768 - 30775847
Alignment:
Q  31 accttgaacggccacaacttcatatcattttgaacatcagaatcattaaacttcctaccaattaacctcttagcatctga 110  Q
    |||||||| |||||||||   ||||| ||||||||| |||  ||  |||| ||||||||||||||||| |||||||||||    
T  30775768 accttgaatggccacaacaaaatatctttttgaacaacagggtcgctaaatttcctaccaattaaccttttagcatctga 30775847  T

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Target: chr4; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 109
Target Start/End: Complemental strand, 9335549 - 9335465
Alignment:
Q  25 gaaatgaccttgaacggccacaacttcatatcattttgaacatcagaatcattaaacttcctaccaattaacctcttagcatctg 109  Q
    ||||| |||||||| |||||||||   |||||  |||||||| |   |||| |||||||||||||| |||| |||||||||||||    
T  9335549 gaaataaccttgaatggccacaacaatatatctctttgaacaaccagatcactaaacttcctaccagttaatctcttagcatctg 9335465  T

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