View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14406_high_31 (Length: 219)
Name: NF14406_high_31
Description: NF14406
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14406_high_31 |
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Alignment Details
Target: chr1 (Bit Score: 128; Significance: 2e-66; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 17 - 205
Target Start/End: Original strand, 37337069 - 37337257
Alignment:
| Q |
17 |
acaaaccaaactcatttaacaaaatttcttgtttggtttttgatacgttcaagaaaataaccgtcaaaaagaactcattttattggaagnnnnnnnnnnn |
116 |
Q |
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| T |
37337069 |
acaaaccaaactcatttaacaaaatttcttgtttggtttttgatacgttcaagaaaataaccgtcaaaaagaactcattttgttggaagtttttcttttt |
37337168 |
T |
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| Q |
117 |
nnnnnnnngttgatgataatggagaaaagaagtggtagcttccttagcttctttgatcggaatggaaaatctccaaagaaactcctttg |
205 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37337169 |
ctttctttgttgatgataatggagaaaagaagtggtagcttccttagcttctttgatcggaatggaaaatctccaaagaaactcctttg |
37337257 |
T |
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