View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14408_high_1 (Length: 465)

Name: NF14408_high_1
Description: NF14408
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14408_high_1
NF14408_high_1
[»] chr6 (28 HSPs)
chr6 (4-450)||(3400980-3401424)
chr6 (269-346)||(29197724-29197801)
chr6 (278-347)||(1434667-1434736)
chr6 (272-343)||(11635620-11635691)
chr6 (269-343)||(11742976-11743050)
chr6 (258-348)||(34490345-34490435)
chr6 (271-343)||(31934153-31934225)
chr6 (271-343)||(27102118-27102190)
chr6 (271-343)||(27143940-27144012)
chr6 (308-343)||(736853-736888)
chr6 (261-348)||(8173298-8173385)
chr6 (272-343)||(12501477-12501548)
chr6 (260-343)||(16743251-16743334)
chr6 (269-343)||(26595352-26595426)
chr6 (309-343)||(3373776-3373810)
chr6 (309-347)||(31413535-31413573)
chr6 (271-348)||(21506334-21506411)
chr6 (278-343)||(25995445-25995510)
chr6 (278-343)||(26094908-26094973)
chr6 (278-347)||(29172989-29173058)
chr6 (271-348)||(30622022-30622099)
chr6 (278-343)||(30796078-30796143)
chr6 (271-343)||(3660349-3660421)
chr6 (275-343)||(7577186-7577254)
chr6 (222-250)||(21210593-21210621)
chr6 (307-343)||(27334861-27334897)
chr6 (307-343)||(27395601-27395637)
chr6 (275-343)||(32784741-32784809)
[»] chr2 (41 HSPs)
chr2 (269-348)||(10288148-10288227)
chr2 (269-348)||(13553145-13553224)
chr2 (275-348)||(37077787-37077861)
chr2 (278-343)||(3091744-3091809)
chr2 (258-343)||(35792439-35792524)
chr2 (271-343)||(9384378-9384450)
chr2 (260-343)||(8352838-8352921)
chr2 (294-348)||(26802247-26802301)
chr2 (278-343)||(34139041-34139106)
chr2 (271-348)||(44484652-44484729)
chr2 (275-343)||(34373008-34373076)
chr2 (166-230)||(42607423-42607487)
chr2 (313-348)||(14891116-14891151)
chr2 (272-347)||(44085273-44085348)
chr2 (269-343)||(15283244-15283318)
chr2 (308-346)||(19631386-19631424)
chr2 (308-346)||(19828287-19828325)
chr2 (278-343)||(20534056-20534119)
chr2 (269-343)||(36763518-36763591)
chr2 (278-343)||(40358114-40358180)
chr2 (166-215)||(1763714-1763763)
chr2 (302-343)||(3039867-3039908)
chr2 (307-348)||(4319767-4319808)
chr2 (260-341)||(6742395-6742476)
chr2 (271-348)||(6884908-6884985)
chr2 (278-343)||(26321700-26321765)
chr2 (271-348)||(36383460-36383537)
chr2 (269-342)||(43621942-43622015)
chr2 (307-343)||(5095985-5096021)
chr2 (275-343)||(6328670-6328738)
chr2 (315-343)||(7428436-7428464)
chr2 (307-343)||(8329910-8329946)
chr2 (307-343)||(8805233-8805269)
chr2 (275-343)||(10749679-10749747)
chr2 (307-343)||(18531604-18531640)
chr2 (307-343)||(29893613-29893649)
chr2 (284-348)||(30192360-30192424)
chr2 (307-343)||(30220842-30220878)
chr2 (271-343)||(34144547-34144619)
chr2 (271-343)||(35171222-35171294)
chr2 (275-343)||(36816416-36816484)
[»] chr3 (53 HSPs)
chr3 (269-343)||(1295335-1295409)
chr3 (260-348)||(7351623-7351711)
chr3 (275-343)||(21239078-21239146)
chr3 (271-343)||(37134602-37134674)
chr3 (164-247)||(30640-30723)
chr3 (269-343)||(7867705-7867779)
chr3 (280-338)||(24703890-24703948)
chr3 (260-350)||(34607905-34607995)
chr3 (269-343)||(35376545-35376619)
chr3 (271-343)||(36799401-36799473)
chr3 (278-343)||(4189740-4189803)
chr3 (278-348)||(29705901-29705971)
chr3 (270-343)||(16267892-16267965)
chr3 (278-343)||(27198163-27198228)
chr3 (286-343)||(29800560-29800617)
chr3 (278-343)||(47849675-47849740)
chr3 (295-343)||(884537-884585)
chr3 (271-343)||(9159032-9159104)
chr3 (271-343)||(28300289-28300361)
chr3 (284-348)||(38944150-38944214)
chr3 (271-343)||(46344417-46344489)
chr3 (284-343)||(1207949-1208008)
chr3 (275-338)||(1261375-1261438)
chr3 (271-346)||(16139291-16139366)
chr3 (296-343)||(22836216-22836263)
chr3 (288-343)||(34663084-34663139)
chr3 (308-347)||(35987247-35987286)
chr3 (278-341)||(41309005-41309068)
chr3 (269-343)||(42672828-42672903)
chr3 (269-348)||(43409356-43409435)
chr3 (308-343)||(45205291-45205326)
chr3 (269-343)||(48405413-48405488)
chr3 (168-230)||(16675903-16675965)
chr3 (278-343)||(18741120-18741186)
chr3 (308-342)||(41349011-41349045)
chr3 (269-343)||(43499556-43499629)
chr3 (269-343)||(52100264-52100338)
chr3 (285-343)||(55344306-55344364)
chr3 (278-343)||(14957839-14957904)
chr3 (260-341)||(37710409-37710490)
chr3 (313-342)||(49031439-49031468)
chr3 (271-343)||(1834509-1834581)
chr3 (218-250)||(10351199-10351231)
chr3 (271-343)||(11327111-11327183)
chr3 (307-343)||(20549417-20549453)
chr3 (275-343)||(25559707-25559775)
chr3 (275-343)||(35755987-35756054)
chr3 (260-348)||(36869822-36869910)
chr3 (275-343)||(38471645-38471713)
chr3 (279-343)||(48944714-48944778)
chr3 (284-343)||(49167681-49167738)
chr3 (275-343)||(50025698-50025766)
chr3 (307-343)||(53932423-53932459)
[»] chr5 (35 HSPs)
chr5 (271-348)||(582863-582940)
chr5 (260-343)||(35098717-35098800)
chr5 (260-343)||(6538873-6538956)
chr5 (269-343)||(7144580-7144654)
chr5 (259-345)||(17489349-17489435)
chr5 (278-343)||(38500946-38501011)
chr5 (260-348)||(22402611-22402699)
chr5 (267-343)||(27440482-27440558)
chr5 (164-250)||(10059664-10059751)
chr5 (284-343)||(35464592-35464651)
chr5 (261-343)||(40829417-40829500)
chr5 (289-343)||(3167322-3167376)
chr5 (271-343)||(3263504-3263576)
chr5 (271-343)||(24329978-24330050)
chr5 (278-349)||(38704199-38704271)
chr5 (284-343)||(9277620-9277679)
chr5 (260-343)||(15639388-15639471)
chr5 (261-343)||(1107984-1108066)
chr5 (316-346)||(4098623-4098653)
chr5 (278-348)||(8787159-8787229)
chr5 (166-212)||(22402773-22402819)
chr5 (307-349)||(27005511-27005553)
chr5 (269-343)||(29803228-29803302)
chr5 (263-340)||(28042054-28042131)
chr5 (271-343)||(5996670-5996742)
chr5 (159-250)||(9240217-9240309)
chr5 (315-343)||(14070655-14070683)
chr5 (307-343)||(19844341-19844377)
chr5 (271-343)||(20985525-20985597)
chr5 (307-343)||(28501595-28501631)
chr5 (271-343)||(32424954-32425026)
chr5 (308-340)||(35131290-35131322)
chr5 (275-343)||(36572694-36572762)
chr5 (271-343)||(38010875-38010947)
chr5 (307-343)||(40039293-40039329)
[»] chr8 (41 HSPs)
chr8 (260-343)||(12697698-12697781)
chr8 (278-347)||(3893401-3893470)
chr8 (271-348)||(14228705-14228782)
chr8 (258-348)||(37784357-37784447)
chr8 (294-343)||(29913567-29913616)
chr8 (271-343)||(14531624-14531696)
chr8 (271-343)||(43186299-43186371)
chr8 (260-343)||(6004947-6005030)
chr8 (284-343)||(32725789-32725848)
chr8 (269-343)||(33115908-33115983)
chr8 (278-348)||(3650111-3650181)
chr8 (278-343)||(28927684-28927749)
chr8 (271-348)||(30927927-30928004)
chr8 (271-343)||(23952497-23952569)
chr8 (271-343)||(33863244-33863316)
chr8 (307-343)||(37343377-37343413)
chr8 (275-343)||(39021443-39021511)
chr8 (275-343)||(43873691-43873759)
chr8 (206-343)||(44380542-44380682)
chr8 (284-343)||(6806911-6806970)
chr8 (260-343)||(6849246-6849329)
chr8 (166-225)||(8142903-8142962)
chr8 (260-343)||(21273695-21273778)
chr8 (271-342)||(32234448-32234519)
chr8 (305-343)||(2952688-2952726)
chr8 (269-343)||(14548817-14548891)
chr8 (281-343)||(28623117-28623179)
chr8 (307-348)||(4312546-4312587)
chr8 (170-246)||(33817259-33817336)
chr8 (166-211)||(36805150-36805195)
chr8 (202-250)||(2733891-2733938)
chr8 (271-347)||(18411291-18411367)
chr8 (271-343)||(22203211-22203283)
chr8 (201-245)||(27071225-27071269)
chr8 (275-343)||(32674232-32674300)
chr8 (307-343)||(35345423-35345459)
chr8 (284-348)||(36064028-36064092)
chr8 (283-343)||(40614198-40614258)
chr8 (166-230)||(40723354-40723418)
chr8 (275-347)||(41675369-41675441)
chr8 (307-347)||(44064356-44064396)
[»] chr4 (55 HSPs)
chr4 (164-343)||(32901332-32901514)
chr4 (271-347)||(26739969-26740045)
chr4 (271-343)||(39449176-39449247)
chr4 (284-343)||(45548793-45548852)
chr4 (269-343)||(54801001-54801075)
chr4 (307-343)||(32303317-32303353)
chr4 (307-347)||(52487301-52487341)
chr4 (269-348)||(34259813-34259892)
chr4 (269-343)||(44272804-44272878)
chr4 (271-348)||(9472509-9472586)
chr4 (275-348)||(30250300-30250373)
chr4 (258-347)||(47519703-47519792)
chr4 (267-348)||(48414201-48414282)
chr4 (260-348)||(43864032-43864119)
chr4 (271-343)||(53662424-53662496)
chr4 (271-343)||(54803324-54803396)
chr4 (308-343)||(940292-940327)
chr4 (304-343)||(12074475-12074514)
chr4 (307-342)||(15847415-15847450)
chr4 (271-338)||(17805460-17805527)
chr4 (307-342)||(33484140-33484175)
chr4 (284-343)||(36728631-36728690)
chr4 (260-343)||(40161687-40161769)
chr4 (269-348)||(40847368-40847447)
chr4 (165-250)||(6686144-6686230)
chr4 (269-343)||(8455864-8455938)
chr4 (309-343)||(32464638-32464672)
chr4 (280-343)||(32541709-32541774)
chr4 (284-346)||(34114126-34114188)
chr4 (269-343)||(44495988-44496062)
chr4 (261-350)||(53654736-53654825)
chr4 (278-348)||(53781840-53781909)
chr4 (166-250)||(2613505-2613590)
chr4 (286-343)||(19879776-19879833)
chr4 (307-348)||(20056394-20056435)
chr4 (275-339)||(22027441-22027506)
chr4 (271-348)||(31804325-31804402)
chr4 (275-343)||(31995915-31995984)
chr4 (278-343)||(36444398-36444463)
chr4 (166-250)||(41609560-41609645)
chr4 (275-348)||(45779291-45779364)
chr4 (275-348)||(48791597-48791670)
chr4 (278-343)||(51318706-51318771)
chr4 (278-343)||(54251453-54251518)
chr4 (271-343)||(4100751-4100823)
chr4 (308-348)||(4914904-4914944)
chr4 (163-246)||(33483991-33484075)
chr4 (316-348)||(35017151-35017183)
chr4 (166-194)||(40090838-40090866)
chr4 (275-343)||(40258208-40258276)
chr4 (272-348)||(40308439-40308515)
chr4 (284-348)||(40629349-40629413)
chr4 (203-250)||(41734791-41734839)
chr4 (275-343)||(45176735-45176803)
chr4 (316-348)||(47014937-47014969)
[»] chr1 (62 HSPs)
chr1 (278-343)||(43755681-43755746)
chr1 (271-343)||(45350091-45350163)
chr1 (260-343)||(27352633-27352716)
chr1 (260-343)||(42299171-42299254)
chr1 (269-342)||(5043096-5043169)
chr1 (275-343)||(25672344-25672413)
chr1 (258-343)||(50145784-50145869)
chr1 (271-343)||(23554754-23554826)
chr1 (271-343)||(32966270-32966342)
chr1 (288-343)||(26585186-26585241)
chr1 (164-215)||(26982286-26982337)
chr1 (260-343)||(32821638-32821721)
chr1 (269-343)||(9882653-9882727)
chr1 (269-343)||(13355052-13355126)
chr1 (307-345)||(25994948-25994986)
chr1 (271-348)||(7371944-7372021)
chr1 (307-348)||(26101392-26101433)
chr1 (271-348)||(36794613-36794690)
chr1 (278-343)||(45042264-45042329)
chr1 (271-343)||(3919303-3919375)
chr1 (269-345)||(8757512-8757588)
chr1 (275-343)||(11038265-11038333)
chr1 (271-343)||(14247667-14247739)
chr1 (271-343)||(20268509-20268581)
chr1 (271-343)||(21854460-21854532)
chr1 (275-343)||(36669370-36669438)
chr1 (271-343)||(41885724-41885796)
chr1 (271-343)||(43105108-43105180)
chr1 (307-343)||(46281439-46281475)
chr1 (275-347)||(47113273-47113345)
chr1 (267-343)||(49621366-49621442)
chr1 (260-343)||(586902-586985)
chr1 (284-343)||(7078509-7078568)
chr1 (276-343)||(15182584-15182651)
chr1 (260-343)||(30687055-30687138)
chr1 (260-343)||(40238441-40238524)
chr1 (288-347)||(44161785-44161844)
chr1 (271-302)||(49201954-49201985)
chr1 (163-225)||(28907681-28907743)
chr1 (308-346)||(31974720-31974758)
chr1 (284-346)||(34395928-34395990)
chr1 (165-250)||(42829196-42829281)
chr1 (269-343)||(50528051-50528125)
chr1 (278-347)||(835870-835939)
chr1 (271-348)||(26501293-26501370)
chr1 (275-348)||(27563482-27563555)
chr1 (271-348)||(32873339-32873416)
chr1 (283-343)||(33173698-33173759)
chr1 (271-348)||(34157518-34157594)
chr1 (267-348)||(34941912-34941993)
chr1 (170-348)||(51168660-51168841)
chr1 (164-247)||(7423115-7423198)
chr1 (309-341)||(14442265-14442297)
chr1 (307-347)||(18639736-18639776)
chr1 (260-348)||(25988969-25989057)
chr1 (271-343)||(29489355-29489427)
chr1 (307-343)||(34157809-34157845)
chr1 (308-348)||(39669804-39669844)
chr1 (271-343)||(40118711-40118783)
chr1 (271-343)||(41608732-41608804)
chr1 (306-342)||(41619060-41619096)
chr1 (307-343)||(45863753-45863789)
[»] chr7 (54 HSPs)
chr7 (260-348)||(43079617-43079705)
chr7 (269-343)||(24532936-24533011)
chr7 (269-348)||(34304672-34304751)
chr7 (269-338)||(4963770-4963839)
chr7 (271-348)||(13437196-13437273)
chr7 (260-341)||(18157170-18157251)
chr7 (170-250)||(40270570-40270651)
chr7 (260-343)||(4971293-4971376)
chr7 (284-343)||(10014964-10015023)
chr7 (289-346)||(11604696-11604753)
chr7 (305-342)||(34690954-34690991)
chr7 (271-343)||(16567319-16567391)
chr7 (271-343)||(16598271-16598343)
chr7 (271-343)||(17039160-17039232)
chr7 (271-343)||(26153649-26153720)
chr7 (275-343)||(29763833-29763901)
chr7 (275-343)||(38096439-38096507)
chr7 (275-343)||(41966335-41966403)
chr7 (271-343)||(44511142-44511214)
chr7 (271-343)||(44564719-44564790)
chr7 (284-339)||(5868311-5868366)
chr7 (284-343)||(37325828-37325887)
chr7 (284-347)||(37385242-37385305)
chr7 (304-343)||(40760797-40760836)
chr7 (308-343)||(49167888-49167923)
chr7 (308-342)||(4560509-4560543)
chr7 (305-343)||(7458221-7458259)
chr7 (289-343)||(12141902-12141956)
chr7 (281-343)||(23329905-23329967)
chr7 (278-343)||(25332501-25332567)
chr7 (308-346)||(27125585-27125623)
chr7 (271-345)||(31436420-31436494)
chr7 (261-318)||(38939965-38940023)
chr7 (284-342)||(43255576-43255634)
chr7 (278-343)||(7807058-7807123)
chr7 (271-348)||(11070226-11070303)
chr7 (278-343)||(28081785-28081850)
chr7 (271-348)||(31009636-31009713)
chr7 (162-249)||(31467703-31467791)
chr7 (271-348)||(35857495-35857572)
chr7 (288-349)||(49014412-49014473)
chr7 (269-337)||(677769-677837)
chr7 (272-344)||(1789993-1790065)
chr7 (307-343)||(15564914-15564950)
chr7 (272-348)||(22692082-22692158)
chr7 (316-348)||(23680068-23680100)
chr7 (275-343)||(28548221-28548289)
chr7 (163-246)||(29162164-29162248)
chr7 (271-343)||(30864413-30864485)
chr7 (271-343)||(33050186-33050258)
chr7 (275-343)||(33341125-33341193)
chr7 (271-343)||(37392046-37392118)
chr7 (275-343)||(37969934-37970002)
chr7 (284-348)||(38990099-38990163)
[»] scaffold0003 (1 HSPs)
scaffold0003 (260-348)||(337116-337204)
[»] scaffold0522 (1 HSPs)
scaffold0522 (284-343)||(2513-2572)
[»] scaffold0018 (1 HSPs)
scaffold0018 (308-343)||(36005-36040)
[»] scaffold0024 (1 HSPs)
scaffold0024 (308-342)||(89469-89503)
[»] scaffold0086 (1 HSPs)
scaffold0086 (260-337)||(17315-17392)
[»] scaffold0085 (1 HSPs)
scaffold0085 (166-250)||(32077-32158)
[»] scaffold0001 (1 HSPs)
scaffold0001 (286-343)||(395864-395921)
[»] scaffold0662 (1 HSPs)
scaffold0662 (316-348)||(1076-1108)
[»] scaffold0592 (2 HSPs)
scaffold0592 (275-343)||(913-981)
scaffold0592 (271-343)||(8303-8375)
[»] scaffold0041 (1 HSPs)
scaffold0041 (320-348)||(34406-34434)
[»] scaffold0011 (1 HSPs)
scaffold0011 (271-343)||(18598-18670)


Alignment Details
Target: chr6 (Bit Score: 383; Significance: 0; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 383; E-Value: 0
Query Start/End: Original strand, 4 - 450
Target Start/End: Complemental strand, 3401424 - 3400980
Alignment:
Q  4 tgggacagaaggagtacatatttatcaacgacatgtttatatcaatagaaaaatttgaactcgtatatattttctgaagaggtgaactcatatactcgta 103  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3401424 tgggacagaaggagtacatatttatcaacgatgtgtttatatcaatagaaaaatttgaactcgtatatattttctgaagaggtgaactcatatactcgta 3401325  T
Q  104 tattaatatatgagtagacaactcggtcggtgaactaatgaaacatcacaagaatagtagtagagtaatgatatttgtacaattatttgataacgagttt 203  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  3401324 tattaatatatgagtagacaactcggttggtgaactaatgaaacatcacaagaatagtagtagagtaatgatatttgtacaattatttgataacgacttt 3401225  T
Q  204 tgtgacaatctttcttttctcttttttattgataaaaaacaatagagnnnnnnngtaagagatatagtaagaacataatatgagtatgaaagaaaaaatc 303  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||       |||||||  |||||||||||||||||||||||||||||||||||||    
T  3401224 tgtgacaatctttcttttctcttttttattggtaaaaaacaataaagaaaaaaagtaagag--atagtaagaacataatatgagtatgaaagaaaaaatc 3401127  T
Q  304 gttcaaaaattatcacaaaatagttgtacaaatatcatttatctactactaagaatttataagttgcaaacccttaaactaaaataacacccaaatattt 403  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3401126 gttcaaaaattatcacaaaatagttgtacaaatatcatttatctagtactaagaatttataagttgcaaacccttaaactaaaataacacccaaatattt 3401027  T
Q  404 gtctataaaataatgagtggcattgttacaaactagaccaatatttt 450  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||    
T  3401026 gtctataaaataatgagtggcattgttagaaactagaccaatatttt 3400980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 269 - 346
Target Start/End: Complemental strand, 29197801 - 29197724
Alignment:
Q  269 agtaagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatttatc 346  Q
    |||||||||||||||||| ||||| ||| ||||| || ||||||||||||||||||  |||||||||||| |||||||    
T  29197801 agtaagaacataatatgaatatgagagagaaaattgtccaaaaattatcacaaaatgattgtacaaatattatttatc 29197724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 278 - 347
Target Start/End: Original strand, 1434667 - 1434736
Alignment:
Q  278 ataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatttatct 347  Q
    ||||||||| ||||| ||||||||| ||  ||||||||||||||| || |||||||||||||||||||||    
T  1434667 ataatatgaatatgagagaaaaaattgtcaaaaaattatcacaaattaattgtacaaatatcatttatct 1434736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 272 - 343
Target Start/End: Complemental strand, 11635691 - 11635620
Alignment:
Q  272 aagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||||||||| ||||||||||||| ||| |  || ||||||||||| ||||| ||||||||||||||||||    
T  11635691 aagaacataatttgagtatgaaagagaaagttattaaaaaattatcataaaattgttgtacaaatatcattt 11635620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 269 - 343
Target Start/End: Original strand, 11742976 - 11743050
Alignment:
Q  269 agtaagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||| || ||||| ||||||||| ||||||||| ||  ||||||||||| ||||||||||||||||||| ||||    
T  11742976 agtaaaaatataatgtgagtatgagagaaaaaattgtctaaaaattatcaaaaaatagttgtacaaatattattt 11743050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 258 - 348
Target Start/End: Complemental strand, 34490435 - 34490345
Alignment:
Q  258 gtaagagatatagtaagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatttatcta 348  Q
    |||||||| | |||||||| ||||| ||||||||| ||| ||||| ||  ||||||| | | ||||| |||||||||||||||||||||||    
T  34490435 gtaagagaaagagtaagaatataatgtgagtatgagagagaaaattgtctaaaaattgttaaaaaatggttgtacaaatatcatttatcta 34490345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 271 - 343
Target Start/End: Original strand, 31934153 - 31934225
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||| ||||| ||||||||| ||| ||||| ||||||||||| |  |||||| ||||||||||||||||||    
T  31934153 taagaatataatgtgagtatgacagagaaaattgttcaaaaattgtatcaaaatggttgtacaaatatcattt 31934225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 271 - 343
Target Start/End: Complemental strand, 27102190 - 27102118
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||| ||||||| ||||| | ||||||||| ||  ||||||||| | ||||| ||||||||||||||||||    
T  27102190 taagaagataatataagtataagagaaaaaattgtcaaaaaattattagaaaatggttgtacaaatatcattt 27102118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 271 - 343
Target Start/End: Complemental strand, 27144012 - 27143940
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||| ||||||| ||||| | ||||||||| ||  ||||||||| | ||||| ||||||||||||||||||    
T  27144012 taagaagataatataagtataagagaaaaaattgtcaaaaaattattagaaaatggttgtacaaatatcattt 27143940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 308 - 343
Target Start/End: Original strand, 736853 - 736888
Alignment:
Q  308 aaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||||||||| ||||||||||||||||||||||||    
T  736853 aaaaattatcataaaatagttgtacaaatatcattt 736888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 261 - 348
Target Start/End: Original strand, 8173298 - 8173385
Alignment:
Q  261 agagatatagtaagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatttatcta 348  Q
    ||||| ||||||| || ||||| ||| ||||||||| ||||| ||  |||| |||||||||| | |||| ||||||||||||| ||||    
T  8173298 agagagatagtaaaaatataatgtgaatatgaaagagaaaattgtctaaaagttatcacaaagtggttgcacaaatatcatttctcta 8173385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 272 - 343
Target Start/End: Complemental strand, 12501548 - 12501477
Alignment:
Q  272 aagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||||| |||| ||||||  ||| ||| | ||| ||||||| |||||||||| |||||||||||||||||    
T  12501548 aagaacatcatataagtatgtgagagaaagttgtttaaaaattgtcacaaaataattgtacaaatatcattt 12501477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 343
Target Start/End: Original strand, 16743251 - 16743334
Alignment:
Q  260 aagagatatagtaagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||| | |||||||| ||||| ||||||||| ||| ||| | ||  ||||||||| | ||||| ||||||||||||||||||    
T  16743251 aagagagagagtaagaatataatgtgagtatgagagagaaagttgtctaaaaattattaaaaaatggttgtacaaatatcattt 16743334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 343
Target Start/End: Complemental strand, 26595426 - 26595352
Alignment:
Q  269 agtaagaacataatatgagtatgaaagaaaaaatcgttcaaaaa-ttatcacaaaatagttgtacaaatatcattt 343  Q
    ||||| |||||||| ||||||||| ||||||||| |||  |||| |||||| ||||||||||| ||||||||||||    
T  26595426 agtaaaaacataatgtgagtatgagagaaaaaattgttataaaagttatca-aaaatagttgttcaaatatcattt 26595352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 309 - 343
Target Start/End: Complemental strand, 3373810 - 3373776
Alignment:
Q  309 aaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||||||||||||||||||||| |||||||||||    
T  3373810 aaaattatcacaaaatagttgtataaatatcattt 3373776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 309 - 347
Target Start/End: Complemental strand, 31413573 - 31413535
Alignment:
Q  309 aaaattatcacaaaatagttgtacaaatatcatttatct 347  Q
    |||||| |||||||||| |||||||||||||||||||||    
T  31413573 aaaattgtcacaaaataattgtacaaatatcatttatct 31413535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 348
Target Start/End: Complemental strand, 21506411 - 21506334
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatttatcta 348  Q
    |||||| ||||| ||||||||| ||| ||| | ||  |||| || ||| ||||| |||||||||||||||||||||||    
T  21506411 taagaagataatgtgagtatgagagagaaagttgtcaaaaagttgtcaaaaaatggttgtacaaatatcatttatcta 21506334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 343
Target Start/End: Complemental strand, 25995510 - 25995445
Alignment:
Q  278 ataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||| ||||||||| ||| ||| | || ||||||||  |||||||| ||||||||||||||||||    
T  25995510 ataatgtgagtatgagagagaaagttgtacaaaaattgccacaaaatggttgtacaaatatcattt 25995445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 343
Target Start/End: Complemental strand, 26094973 - 26094908
Alignment:
Q  278 ataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||| ||||||||| ||| ||| | || ||||||||  |||||||| ||||||||||||||||||    
T  26094973 ataatgtgagtatgagagataaagttgtacaaaaattgccacaaaatggttgtacaaatatcattt 26094908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 347
Target Start/End: Complemental strand, 29173058 - 29172989
Alignment:
Q  278 ataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatttatct 347  Q
    ||||| ||||||||||| | ||| |  || |||| |||||| ||||| ||||||||||||||||||||||    
T  29173058 ataatgtgagtatgaaaaagaaagttattaaaaagttatcataaaatggttgtacaaatatcatttatct 29172989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 348
Target Start/End: Complemental strand, 30622099 - 30622022
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatttatcta 348  Q
    |||||| ||||||||||||||| |||  || | ||| ||||||| | | ||| |||||||||||||||||||| ||||    
T  30622099 taagaatataatatgagtatgagagagtaagttgttaaaaaattgtaataaagtagttgtacaaatatcatttctcta 30622022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 343
Target Start/End: Original strand, 30796078 - 30796143
Alignment:
Q  278 ataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||| ||||||||||||| ||| | ||  ||||||| ||||||| | ||||||||||||||||||    
T  30796078 ataatgtgagtatgaaagagaaagttgtaaaaaaattgtcacaaagtggttgtacaaatatcattt 30796143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 271 - 343
Target Start/End: Original strand, 3660349 - 3660421
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||| ||| || ||||||||| ||||||||| || ||||| || ||||||| | ||||||||||||| ||||    
T  3660349 taagaccatcatgtgagtatgagagaaaaaattgtacaaaagttgtcacaaattggttgtacaaatataattt 3660421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 275 - 343
Target Start/End: Original strand, 7577186 - 7577254
Alignment:
Q  275 aacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||| |||||||||||| |||  ||||  | |||||||||| | ||||||| ||||||||||||||||    
T  7577186 aacatcatatgagtatgagagagtaaattatccaaaaattattataaaatagatgtacaaatatcattt 7577254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 250
Target Start/End: Complemental strand, 21210621 - 21210593
Alignment:
Q  222 ctcttttttattgataaaaaacaatagag 250  Q
    |||||||||||||||||||||||||||||    
T  21210621 ctcttttttattgataaaaaacaatagag 21210593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 343
Target Start/End: Complemental strand, 27334897 - 27334861
Alignment:
Q  307 caaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||| || ||||||||||||||||||||||||||||    
T  27334897 caaaagttgtcacaaaatagttgtacaaatatcattt 27334861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 343
Target Start/End: Complemental strand, 27395637 - 27395601
Alignment:
Q  307 caaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||| || ||||||||||||||||||||||||||||    
T  27395637 caaaagttgtcacaaaatagttgtacaaatatcattt 27395601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 275 - 343
Target Start/End: Complemental strand, 32784809 - 32784741
Alignment:
Q  275 aacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||| |||| ||||||||||||||| | ||  |||| || | |||||||| |||||||||||||||||    
T  32784809 aacatcatataagtatgaaagaaaaagttgtcaaaaagttgtaacaaaataattgtacaaatatcattt 32784741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 3e-18; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 269 - 348
Target Start/End: Complemental strand, 10288227 - 10288148
Alignment:
Q  269 agtaagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatttatcta 348  Q
    |||||||| | ||||||||||||| ||||||| | ||  |||||||||||||||||||||||||||||||||||| ||||    
T  10288227 agtaagaatagaatatgagtatgagagaaaaagttgtctaaaaattatcacaaaatagttgtacaaatatcatttctcta 10288148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 269 - 348
Target Start/End: Complemental strand, 13553224 - 13553145
Alignment:
Q  269 agtaagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatttatcta 348  Q
    |||||||| ||||||||||||||| ||| ||||| || |||||||||||||||| | |||||||||||||||||| ||||    
T  13553224 agtaagaatataatatgagtatgagagagaaaattgtccaaaaattatcacaaagtggttgtacaaatatcatttctcta 13553145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 275 - 348
Target Start/End: Complemental strand, 37077861 - 37077787
Alignment:
Q  275 aacataatatgagtatgaaagaaaaaatcgtt-caaaaattatcacaaaatagttgtacaaatatcatttatcta 348  Q
    |||||||| ||||||||||||| ||||| ||| |||||||||||| ||||||||||| |||||||||||| ||||    
T  37077861 aacataatgtgagtatgaaagataaaattgttacaaaaattatcaaaaaatagttgttcaaatatcatttttcta 37077787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 278 - 343
Target Start/End: Complemental strand, 3091809 - 3091744
Alignment:
Q  278 ataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||| ||||||||| ||| ||||| ||  |||| |||||||||||||||||||||||||||||||    
T  3091809 ataatgtgagtatgagagagaaaattgtcaaaaagttatcacaaaatagttgtacaaatatcattt 3091744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 343
Target Start/End: Original strand, 35792439 - 35792524
Alignment:
Q  258 gtaagagatatagtaagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||||| | |||||||| ||||| ||||||||| | ||||| | ||  ||||||||||||||| | ||||||||||||||||||    
T  35792439 gtaagagagagagtaagaatataatgtgagtatgagataaaaagttgtctaaaaattatcacaaagttgttgtacaaatatcattt 35792524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 271 - 343
Target Start/End: Complemental strand, 9384450 - 9384378
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||| ||||||||||||||| ||| ||| | || ||||||||||   ||||||||||||||||||||||||    
T  9384450 taagaagataatatgagtatgagagagaaagttgtacaaaaattatgtaaaaatagttgtacaaatatcattt 9384378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 8352921 - 8352838
Alignment:
Q  260 aagagatatagtaagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||| | |||||||| ||||| ||||||||| ||| ||||| ||  |||| |||| | ||||||||||||||||||||||||    
T  8352921 aagagagagagtaagaatataatgtgagtatgagagagaaaattgtctaaaagttattaaaaaatagttgtacaaatatcattt 8352838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 348
Target Start/End: Original strand, 26802247 - 26802301
Alignment:
Q  294 agaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatttatcta 348  Q
    ||||||||| |||||||||||||||||||||| ||||| ||||||| ||| ||||    
T  26802247 agaaaaaattgttcaaaaattatcacaaaataattgtataaatatcgtttctcta 26802301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 278 - 343
Target Start/End: Original strand, 34139041 - 34139106
Alignment:
Q  278 ataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||| ||||||||| ||| ||||| ||  ||||||||||||||| ||| ||||||||||||||||    
T  34139041 ataatgtgagtatgagagataaaattgtcaaaaaattatcacaaagtagatgtacaaatatcattt 34139106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 271 - 348
Target Start/End: Original strand, 44484652 - 44484729
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatttatcta 348  Q
    ||||||||| || ||||||||| ||| ||| | || |||||||| | ||||||| |||||||||||||||||| ||||    
T  44484652 taagaacatcatgtgagtatgagagagaaagttgtacaaaaattgttacaaaatggttgtacaaatatcatttctcta 44484729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 275 - 343
Target Start/End: Complemental strand, 34373076 - 34373008
Alignment:
Q  275 aacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||||| ||||||||| ||| ||| | || ||||||||||  |||||| ||||||||||||||||||    
T  34373076 aacataatgtgagtatgagagagaaagttgtacaaaaattataccaaaatggttgtacaaatatcattt 34373008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 42607423 - 42607487
Alignment:
Q  166 gagtaatgatatttgtacaattatttgataacgagttttgtgacaatctttcttttctctttttt 230  Q
    ||||||||||||||||||||| || |||| || | ||||||||||| ||| ||||||||| ||||    
T  42607423 gagtaatgatatttgtacaatcatatgatgacaacttttgtgacaaccttccttttctctctttt 42607487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 348
Target Start/End: Original strand, 14891116 - 14891151
Alignment:
Q  313 ttatcacaaaatagttgtacaaatatcatttatcta 348  Q
    ||||||||||||||||||||||||||||||| ||||    
T  14891116 ttatcacaaaatagttgtacaaatatcatttctcta 14891151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 272 - 347
Target Start/End: Complemental strand, 44085348 - 44085273
Alignment:
Q  272 aagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatttatct 347  Q
    |||||||| || ||||||||  | | ||||| || |||||||| |||||||||| ||||| |||||||||||||||    
T  44085348 aagaacatcatgtgagtatgtgatagaaaattgtccaaaaattgtcacaaaataattgtataaatatcatttatct 44085273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 269 - 343
Target Start/End: Original strand, 15283244 - 15283318
Alignment:
Q  269 agtaagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||||| ||||| ||||||||| ||| ||| | ||  ||||||| ||||||| | ||||||||||||||||||    
T  15283244 agtaagaatataatgtgagtatgagagagaaagttgtctaaaaattgtcacaaagtggttgtacaaatatcattt 15283318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 308 - 346
Target Start/End: Complemental strand, 19631424 - 19631386
Alignment:
Q  308 aaaaattatcacaaaatagttgtacaaatatcatttatc 346  Q
    ||||||| | |||||||||||||||||||||||||||||    
T  19631424 aaaaattgttacaaaatagttgtacaaatatcatttatc 19631386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 308 - 346
Target Start/End: Complemental strand, 19828325 - 19828287
Alignment:
Q  308 aaaaattatcacaaaatagttgtacaaatatcatttatc 346  Q
    ||||||| | |||||||||||||||||||||||||||||    
T  19828325 aaaaattgttacaaaatagttgtacaaatatcatttatc 19828287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 343
Target Start/End: Original strand, 20534056 - 20534119
Alignment:
Q  278 ataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||||||| ||||| ||||||  | |||||| |||||||||||||| ||||| ||||||||||||    
T  20534056 ataatatgaatatgagagaaaa--ttgttcaacaattatcacaaaatggttgtgcaaatatcattt 20534119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 269 - 343
Target Start/End: Original strand, 36763518 - 36763591
Alignment:
Q  269 agtaagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||||| ||||| ||||||||||||| ||| | ||  |||| |||||| |||| |||||||||||||||||||    
T  36763518 agtaagaatataatgtgagtatgaaagagaaagttgtataaaagttatca-aaaaaagttgtacaaatatcattt 36763591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 343
Target Start/End: Original strand, 40358114 - 40358180
Alignment:
Q  278 ataatatgagtatgaaagaaaaaatcgtt-caaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||||| ||||||| ||||||||| ||  |||||||||| | |||||||||||| |||||||||||    
T  40358114 ataatataagtatgagagaaaaaattgtcacaaaaattattaaaaaatagttgtagaaatatcattt 40358180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 166 - 215
Target Start/End: Complemental strand, 1763763 - 1763714
Alignment:
Q  166 gagtaatgatatttgtacaattatttgataacgagttttgtgacaatctt 215  Q
    ||||||||||||||||| || |||||||| || | |||||||||||||||    
T  1763763 gagtaatgatatttgtataactatttgatgacaatttttgtgacaatctt 1763714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 302 - 343
Target Start/End: Complemental strand, 3039908 - 3039867
Alignment:
Q  302 tcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||| |||| |||||||||||||||||||| ||||||||||    
T  3039908 tcgtttaaaagttatcacaaaatagttgtacgaatatcattt 3039867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 348
Target Start/End: Complemental strand, 4319808 - 4319767
Alignment:
Q  307 caaaaattatcacaaaatagttgtacaaatatcatttatcta 348  Q
    |||||||||| | |||||||||||||||||||||||| ||||    
T  4319808 caaaaattattataaaatagttgtacaaatatcatttctcta 4319767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 341
Target Start/End: Original strand, 6742395 - 6742476
Alignment:
Q  260 aagagatatagtaagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcat 341  Q
    |||||| | |||||||| ||||| ||| ||||||||| ||| | |||||||| || |||||||||  || ||||||||||||    
T  6742395 aagagagaaagtaagaagataatgtgaatatgaaagagaaagttgttcaaaagttgtcacaaaatgattttacaaatatcat 6742476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 348
Target Start/End: Complemental strand, 6884985 - 6884908
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatttatcta 348  Q
    ||||| ||| || ||||||||| ||| ||| | ||  |||| |||||||||| |||||||||||||||||||| ||||    
T  6884985 taagaccatcatgtgagtatgagagagaaagttgtataaaagttatcacaaattagttgtacaaatatcatttctcta 6884908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 343
Target Start/End: Original strand, 26321700 - 26321765
Alignment:
Q  278 ataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||| ||||||||| |||  |||| ||  |||| |||||||||||| ||||||||||||||||||    
T  26321700 ataatgtgagtatgatagaggaaattgtcaaaaagttatcacaaaatggttgtacaaatatcattt 26321765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 348
Target Start/End: Complemental strand, 36383537 - 36383460
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatttatcta 348  Q
    ||||||||| || ||||||||| ||| ||| | || ||||| || |||||||||  ||||||||||||||||| ||||    
T  36383537 taagaacatcatgtgagtatgagagagaaagttgtacaaaagttgtcacaaaatctttgtacaaatatcatttctcta 36383460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 269 - 342
Target Start/End: Original strand, 43621942 - 43622015
Alignment:
Q  269 agtaagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatt 342  Q
    |||||||| ||||  | ||||||| ||| ||| | |||||||| || ||| |||||||||||||||||||||||    
T  43621942 agtaagaagataacgtaagtatgagagagaaagttgttcaaaagttgtcataaaatagttgtacaaatatcatt 43622015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 343
Target Start/End: Original strand, 5095985 - 5096021
Alignment:
Q  307 caaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||||||||||||||||  |||||||||||||||||    
T  5095985 caaaaattatcacaaaatgattgtacaaatatcattt 5096021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 275 - 343
Target Start/End: Complemental strand, 6328738 - 6328670
Alignment:
Q  275 aacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||||| ||| ||||| ||| ||| | || ||||||||||  |||||| ||||||||||||||||||    
T  6328738 aacataatgtgaatatgagagagaaagttgtacaaaaattataccaaaatggttgtacaaatatcattt 6328670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 343
Target Start/End: Complemental strand, 7428464 - 7428436
Alignment:
Q  315 atcacaaaatagttgtacaaatatcattt 343  Q
    |||||||||||||||||||||||||||||    
T  7428464 atcacaaaatagttgtacaaatatcattt 7428436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 343
Target Start/End: Original strand, 8329910 - 8329946
Alignment:
Q  307 caaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||||||||||||||||||| || |||||||||||    
T  8329910 caaaaattatcacaaaatagttatataaatatcattt 8329946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 343
Target Start/End: Complemental strand, 8805269 - 8805233
Alignment:
Q  307 caaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||||||||| |||||||||||||| |||||||||    
T  8805269 caaaaattatcataaaatagttgtacatatatcattt 8805233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 275 - 343
Target Start/End: Original strand, 10749679 - 10749747
Alignment:
Q  275 aacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||||| ||||||||||||| | ||| ||  ||| ||| ||| ||||| ||||||||||||||||||    
T  10749679 aacataatgtgagtatgaaagagagaattgtcaaaagattgtcataaaatggttgtacaaatatcattt 10749747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 343
Target Start/End: Complemental strand, 18531640 - 18531604
Alignment:
Q  307 caaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||||| ||| ||||||||||||||||||||||||    
T  18531640 caaaaattgtcaaaaaatagttgtacaaatatcattt 18531604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 343
Target Start/End: Complemental strand, 29893649 - 29893613
Alignment:
Q  307 caaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  29893649 caaaagttatcacaaattagttgtacaaatatcattt 29893613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 284 - 348
Target Start/End: Original strand, 30192360 - 30192424
Alignment:
Q  284 tgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatttatcta 348  Q
    ||||||||| ||| ||||| ||||||||||| | |||||||  ||| ||||||||||||| ||||    
T  30192360 tgagtatgagagagaaaattgttcaaaaatttttacaaaatgattgaacaaatatcatttctcta 30192424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 343
Target Start/End: Original strand, 30220842 - 30220878
Alignment:
Q  307 caaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||| |||||||| ||||||||||||||||||||||    
T  30220842 caaaagttatcacagaatagttgtacaaatatcattt 30220878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 271 - 343
Target Start/End: Original strand, 34144547 - 34144619
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||| ||| || ||||||||| ||| ||| | || |||||||| ||||||| | ||||||||||||||||||    
T  34144547 taagaccatcatgtgagtatgagagagaaagttgtacaaaaattgtcacaaattggttgtacaaatatcattt 34144619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 271 - 343
Target Start/End: Original strand, 35171222 - 35171294
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||| ||| || ||||||||| ||| ||| | || | |||||| ||||||||| ||||||||||||||||||    
T  35171222 taagaccatcatgtgagtatgagagagaaagttgtaccaaaattgtcacaaaatggttgtacaaatatcattt 35171294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 275 - 343
Target Start/End: Original strand, 36816416 - 36816484
Alignment:
Q  275 aacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||||| ||| ||||||||| | | | ||  ||||||||||| |||||||||||| |||||||||||    
T  36816416 aacataatgtgaatatgaaagagagagttgtcaaaaaattatcataaaatagttgtataaatatcattt 36816484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 1e-17; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 269 - 343
Target Start/End: Complemental strand, 1295409 - 1295335
Alignment:
Q  269 agtaagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||||| ||||| ||||||||| ||||||| | || ||||| |||||||||||||||||||||||||||||||    
T  1295409 agtaagaatataatgtgagtatgagagaaaaagttgtccaaaagttatcacaaaatagttgtacaaatatcattt 1295335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 260 - 348
Target Start/End: Original strand, 7351623 - 7351711
Alignment:
Q  260 aagagatatagtaagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatttatcta 348  Q
    |||||||| | |||||| ||||||||||||||| ||| ||||| || ||||||||||   ||||| |||||||||||||||||| ||||    
T  7351623 aagagataaaataagaagataatatgagtatgagagagaaaattgtacaaaaattatacaaaaatggttgtacaaatatcatttctcta 7351711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 275 - 343
Target Start/End: Original strand, 21239078 - 21239146
Alignment:
Q  275 aacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||| |||| | ||| |||||||||||  |||||||||||||| ||||||||||||||||||||||||    
T  21239078 aacatcatataaatataaaagaaaaaattattcaaaaattatcataaaatagttgtacaaatatcattt 21239146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 271 - 343
Target Start/End: Original strand, 37134602 - 37134674
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||| ||||||||| ||||||||| ||| | ||| ||||||| ||| ||||||||||||||||||||||||    
T  37134602 taagaatataatatgaatatgaaagagaaagttgttaaaaaattgtcataaaatagttgtacaaatatcattt 37134674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 164 - 247
Target Start/End: Original strand, 30640 - 30723
Alignment:
Q  164 tagagtaatgatatttgtacaattatttgataacgagttttgtgacaatctttcttttctcttttttattgataaaaaacaata 247  Q
    ||||||||||||||||||||||| ||||| | ||   |||||||| || |||| || ||| |||||||||||||||||||||||    
T  30640 tagagtaatgatatttgtacaatcatttggtgacatcttttgtgataaccttttttatcttttttttattgataaaaaacaata 30723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 269 - 343
Target Start/End: Original strand, 7867705 - 7867779
Alignment:
Q  269 agtaagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||||| ||||| ||||||||| | | ||||| ||| |||| || ||||||||||||||||||||||||||||    
T  7867705 agtaagaatataatgtgagtatgagaaagaaaattgtttaaaagttgtcacaaaatagttgtacaaatatcattt 7867779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 280 - 338
Target Start/End: Complemental strand, 24703948 - 24703890
Alignment:
Q  280 aatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatat 338  Q
    |||||||||| |||||| ||||| ||||||||||||||| ||||| |||||||||||||    
T  24703948 aatatgagtaagaaagagaaaattgttcaaaaattatcaaaaaatggttgtacaaatat 24703890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 260 - 350
Target Start/End: Original strand, 34607905 - 34607995
Alignment:
Q  260 aagagatatagtaagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatttatctact 350  Q
    |||||| | |||||||| | ||||||||||||||||| |||||  |  ||||||| ||||||| | |||||||||||||||||| ||||||    
T  34607905 aagagagagagtaagaatagaatatgagtatgaaagagaaaattatctaaaaattgtcacaaagtggttgtacaaatatcatttctctact 34607995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 269 - 343
Target Start/End: Original strand, 35376545 - 35376619
Alignment:
Q  269 agtaagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||||| ||||||||||||||| ||| ||| | ||  ||||||| ||||||||| ||||||||||||||||||    
T  35376545 agtaagaatataatatgagtatgagagagaaagttgtctaaaaattgtcacaaaatggttgtacaaatatcattt 35376619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 271 - 343
Target Start/End: Complemental strand, 36799473 - 36799401
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||| ||||| ||||||||| | | ||||| ||| |||| |||||| ||||||||||||||||||||||||    
T  36799473 taagaatataatgtgagtatgagaaataaaattgtttaaaagttatcaaaaaatagttgtacaaatatcattt 36799401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 278 - 343
Target Start/End: Complemental strand, 4189803 - 4189740
Alignment:
Q  278 ataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||||  |||||||||||||  | |||||||||||||||||||||| || ||||||||||||||    
T  4189803 ataatataggtatgaaagaaaa--ttgttcaaaaattatcacaaaataattctacaaatatcattt 4189740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 278 - 348
Target Start/End: Complemental strand, 29705971 - 29705901
Alignment:
Q  278 ataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatttatcta 348  Q
    ||||| ||||||||||||| |||||  |  |||||||||||||||||| ||||| ||||||||||| ||||    
T  29705971 ataatgtgagtatgaaagagaaaattatcaaaaaattatcacaaaataattgtataaatatcatttctcta 29705901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 270 - 343
Target Start/End: Original strand, 16267892 - 16267965
Alignment:
Q  270 gtaagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||||| ||||||||||||||| ||| ||| | ||||||||||||| | |||||  || ||||||||||||||    
T  16267892 gtaagaatataatatgagtatgagagagaaagttgttcaaaaattattagaaaatgattatacaaatatcattt 16267965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 278 - 343
Target Start/End: Original strand, 27198163 - 27198228
Alignment:
Q  278 ataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||||||||||||| ||| ||||| ||| |||| |||||| |||||  |||||||||||||||||    
T  27198163 ataatatgagtatgagagataaaattgtttaaaagttatcaaaaaatgattgtacaaatatcattt 27198228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 286 - 343
Target Start/End: Original strand, 29800560 - 29800617
Alignment:
Q  286 agtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||||| ||||||| | ||  ||||||||||||||| ||||||||||||||||||||    
T  29800560 agtatgagagaaaaagttgtctaaaaattatcacaaagtagttgtacaaatatcattt 29800617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 278 - 343
Target Start/End: Complemental strand, 47849740 - 47849675
Alignment:
Q  278 ataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||| |||||||| |||| ||| | ||  ||||||||||||||||| ||||||||||||||||||    
T  47849740 ataatgtgagtatgtaagagaaagttgtcaaaaaattatcacaaaatggttgtacaaatatcattt 47849675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 295 - 343
Target Start/End: Complemental strand, 884585 - 884537
Alignment:
Q  295 gaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||||| || | |||||||| ||||||||||||||||||||||||||    
T  884585 gaaaaaattgtaccaaaattataacaaaatagttgtacaaatatcattt 884537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 271 - 343
Target Start/End: Original strand, 9159032 - 9159104
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||| ||||| ||||||||||||| ||||| || |||||||| |   ||||| ||||||||||||||||||    
T  9159032 taagaagataatgtgagtatgaaagagaaaattgtacaaaaattgtacaaaaatggttgtacaaatatcattt 9159104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 271 - 343
Target Start/End: Complemental strand, 28300361 - 28300289
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||| ||||| ||||||| ||||||||| | ||  ||||||||| | ||||| ||||||||||||||||||    
T  28300361 taagaatataatttgagtataaaagaaaaagttgtcaaaaaattataataaaatggttgtacaaatatcattt 28300289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 284 - 348
Target Start/End: Original strand, 38944150 - 38944214
Alignment:
Q  284 tgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatttatcta 348  Q
    ||||||||| ||| ||||| || ||||| || ||||||| |||||||||||||||||||| ||||    
T  38944150 tgagtatgagagagaaaattgtacaaaagttgtcacaaattagttgtacaaatatcatttctcta 38944214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 271 - 343
Target Start/End: Complemental strand, 46344489 - 46344417
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||| ||| |||||| ||||| ||| ||||| || |||||||| | ||||| ||||||||||||||||||||    
T  46344489 taagaccatcatatgaatatgagagagaaaattgtacaaaaattgtaacaaattagttgtacaaatatcattt 46344417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 343
Target Start/End: Complemental strand, 1208008 - 1207949
Alignment:
Q  284 tgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||||||| ||| ||||| |||||| | || ||||| ||||||||||||||||||||||    
T  1208008 tgagtatgagagataaaattgttcaacagttgtcacataatagttgtacaaatatcattt 1207949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 275 - 338
Target Start/End: Original strand, 1261375 - 1261438
Alignment:
Q  275 aacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatat 338  Q
    |||||||| ||||||||||||| ||| | || |||||||| |  ||||||||||||||||||||    
T  1261375 aacataatgtgagtatgaaagagaaagttgtacaaaaattgtatcaaaatagttgtacaaatat 1261438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 346
Target Start/End: Original strand, 16139291 - 16139366
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatttatc 346  Q
    |||||| ||||| ||  ||||| ||| ||||| |||||||| |||||| ||||| ||||||||||||| |||||||    
T  16139291 taagaatataatgtgtttatgagagagaaaattgttcaaaagttatcataaaatggttgtacaaatattatttatc 16139366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 296 - 343
Target Start/End: Original strand, 22836216 - 22836263
Alignment:
Q  296 aaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||||| ||| ||||||||||| ||||| ||||||||||||||||||    
T  22836216 aaaaaattgttgaaaaattatcataaaatggttgtacaaatatcattt 22836263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 288 - 343
Target Start/End: Original strand, 34663084 - 34663139
Alignment:
Q  288 tatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||| ||| |||||| |||||||||||||| |||||| ||||| |||||||||||    
T  34663084 tatgagagagaaaatcattcaaaaattatcataaaatatttgtataaatatcattt 34663139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 308 - 347
Target Start/End: Complemental strand, 35987286 - 35987247
Alignment:
Q  308 aaaaattatcacaaaatagttgtacaaatatcatttatct 347  Q
    |||| |||||||||||||||||||||||||||| ||||||    
T  35987286 aaaagttatcacaaaatagttgtacaaatatcacttatct 35987247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 278 - 341
Target Start/End: Complemental strand, 41309068 - 41309005
Alignment:
Q  278 ataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcat 341  Q
    ||||| ||||||||| ||| ||||| ||| ||||||| ||||||| | ||||||||||||||||    
T  41309068 ataatgtgagtatgagagagaaaattgttaaaaaattgtcacaaagtggttgtacaaatatcat 41309005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 343
Target Start/End: Original strand, 42672828 - 42672903
Alignment:
Q  269 agtaagaacataatatgagtatgaaagaaaaaatcgtt-caaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||| |||||||| ||| ||||| ||||||| | ||  |||||||||||| ||||||||||| ||||||||||||    
T  42672828 agtaaaaacataatgtgaatatgagagaaaaatttgtcacaaaaattatcaaaaaatagttgtgcaaatatcattt 42672903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 348
Target Start/End: Original strand, 43409356 - 43409435
Alignment:
Q  269 agtaagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatttatcta 348  Q
    |||||||| ||||| ||||||| | ||| ||| |  | |||||||||||||||| | |||||||||||||||||| ||||    
T  43409356 agtaagaatataatgtgagtataagagagaaagttttccaaaaattatcacaaagtggttgtacaaatatcatttctcta 43409435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 308 - 343
Target Start/End: Complemental strand, 45205326 - 45205291
Alignment:
Q  308 aaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||||| ||||||||||||||||||||||||||||    
T  45205326 aaaaattgtcacaaaatagttgtacaaatatcattt 45205291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 343
Target Start/End: Complemental strand, 48405488 - 48405413
Alignment:
Q  269 agtaagaacataatatgagtatgaaagaaaaaatcgtt-caaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||| |||||||| ||||||||| ||| ||| | ||| ||||| || ||||||||| ||||||||||||||||||    
T  48405488 agtaaaaacataatgtgagtatgagagagaaagttgttacaaaagttgtcacaaaatggttgtacaaatatcattt 48405413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 168 - 230
Target Start/End: Original strand, 16675903 - 16675965
Alignment:
Q  168 gtaatgatatttgtacaattatttgataacgagttttgtgacaatctttcttttctctttttt 230  Q
    ||||||||||||||||||||||||||| |  | ||||||||||| |||  |||||||| ||||    
T  16675903 gtaatgatatttgtacaattatttgatgataacttttgtgacaaccttctttttctctatttt 16675965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 343
Target Start/End: Complemental strand, 18741186 - 18741120
Alignment:
Q  278 ataatatgagtatgaaagaaaaaatcgtt-caaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||| ||||||||||||| ||||| ||| |||||||||||| ||||| | ||| ||||||||||||    
T  18741186 ataatgtgagtatgaaagagaaaattgttacaaaaattatcaaaaaattgatgttcaaatatcattt 18741120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 308 - 342
Target Start/End: Original strand, 41349011 - 41349045
Alignment:
Q  308 aaaaattatcacaaaatagttgtacaaatatcatt 342  Q
    ||||||||||||||||| |||||||||||||||||    
T  41349011 aaaaattatcacaaaatggttgtacaaatatcatt 41349045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 269 - 343
Target Start/End: Original strand, 43499556 - 43499629
Alignment:
Q  269 agtaagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||||| ||||| ||||||||||| | ||||| || ||||| |||||| ||| | ||||||||||||||||||    
T  43499556 agtaagaatataatgtgagtatgaaa-agaaaattgtccaaaagttatcataaagtggttgtacaaatatcattt 43499629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 269 - 343
Target Start/End: Complemental strand, 52100338 - 52100264
Alignment:
Q  269 agtaagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||| || ||||| | ||||||||||| ||| | || |||||||||| | ||||| ||||||||||||||||||    
T  52100338 agtaaaaatataatgtaagtatgaaagagaaagttgtacaaaaattattaaaaaatggttgtacaaatatcattt 52100264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 285 - 343
Target Start/End: Original strand, 55344306 - 55344364
Alignment:
Q  285 gagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||||||||| ||||| ||  | || |||||||||||| ||||||||||||||||||    
T  55344306 gagtatgaaagagaaaattgtcaagaagttatcacaaaatggttgtacaaatatcattt 55344364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 343
Target Start/End: Complemental strand, 14957904 - 14957839
Alignment:
Q  278 ataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||| ||| ||||| ||||||||| ||| |||| || ||||||| | ||||||||||||||||||    
T  14957904 ataatgtgaatatgagagaaaaaattgttaaaaagttgtcacaaagtggttgtacaaatatcattt 14957839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 341
Target Start/End: Complemental strand, 37710490 - 37710409
Alignment:
Q  260 aagagatatagtaagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcat 341  Q
    |||||| |||||||||| ||||| ||||||||| ||| ||  | |||||||| || ||||| |||  |||||||||||||||    
T  37710490 aagagagatagtaagaagataatgtgagtatgagagagaatcttgttcaaaagttgtcacagaatgattgtacaaatatcat 37710409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 342
Target Start/End: Complemental strand, 49031468 - 49031439
Alignment:
Q  313 ttatcacaaaatagttgtacaaatatcatt 342  Q
    ||||||||||||||||||||||||||||||    
T  49031468 ttatcacaaaatagttgtacaaatatcatt 49031439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 271 - 343
Target Start/End: Complemental strand, 1834581 - 1834509
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||| ||||| ||||||||| ||| ||| | ||||||||||| |  |||||| ||||||||||||| ||||    
T  1834581 taagaatataatgtgagtatgagagagaaagttgttcaaaaattgtagcaaaatggttgtacaaatattattt 1834509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 218 - 250
Target Start/End: Complemental strand, 10351231 - 10351199
Alignment:
Q  218 ttttctcttttttattgataaaaaacaatagag 250  Q
    ||||||||||||||||| |||||||||||||||    
T  10351231 ttttctcttttttattggtaaaaaacaatagag 10351199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 271 - 343
Target Start/End: Complemental strand, 11327183 - 11327111
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||| ||| || ||||||||| ||| ||| | || ||||| || ||||||||| ||||||||||||||||||    
T  11327183 taagaccatcatgtgagtatgagagagaaagttgtacaaaagttgtcacaaaatggttgtacaaatatcattt 11327111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 343
Target Start/End: Original strand, 20549417 - 20549453
Alignment:
Q  307 caaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||||||||| ||||||| ||||||||||||||||    
T  20549417 caaaaattatcataaaatagatgtacaaatatcattt 20549453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 275 - 343
Target Start/End: Complemental strand, 25559775 - 25559707
Alignment:
Q  275 aacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||||||||| ||||| ||| ||| | ||  |||||||||  |||||| ||||||||||||||||||    
T  25559775 aacataatatgaatatgagagagaaagttgtataaaaattataccaaaatggttgtacaaatatcattt 25559707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 275 - 343
Target Start/End: Complemental strand, 35756054 - 35755987
Alignment:
Q  275 aacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||| || ||||||||||||| ||| | ||| ||||||||||| ||||| ||||| ||||||||||||    
T  35756054 aacattatgtgagtatgaaagagaaagttgtt-aaaaattatcataaaatggttgttcaaatatcattt 35755987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 260 - 348
Target Start/End: Original strand, 36869822 - 36869910
Alignment:
Q  260 aagagatatagtaagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatttatcta 348  Q
    |||||| | |||||||| ||||| ||||||||| ||| ||| | ||  |||| || ||| ||||| |||||||||||||||||| ||||    
T  36869822 aagagagagagtaagaatataatgtgagtatgagagagaaagttgtctaaaagttgtcaaaaaatggttgtacaaatatcatttctcta 36869910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 275 - 343
Target Start/End: Complemental strand, 38471713 - 38471645
Alignment:
Q  275 aacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||||| ||||||||| ||| ||||| || ||||| || |  |||||| ||||||||||||||||||    
T  38471713 aacataatgtgagtatgagagagaaaattgtacaaaagttgtaccaaaatggttgtacaaatatcattt 38471645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 343
Target Start/End: Original strand, 48944714 - 48944778
Alignment:
Q  279 taatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||||||||||| ||| ||||| || ||||| || | | ||||| ||||||||||||||||||    
T  48944714 taatatgagtatgagagagaaaattgtacaaaagttgttagaaaatggttgtacaaatatcattt 48944778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 284 - 343
Target Start/End: Original strand, 49167681 - 49167738
Alignment:
Q  284 tgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||||||||||||   | ||| ||||||||||||||||||| |||| |||||||||||    
T  49167681 tgagtatgaaagaaag--ttgttaaaaaattatcacaaaataggtgtagaaatatcattt 49167738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 275 - 343
Target Start/End: Original strand, 50025698 - 50025766
Alignment:
Q  275 aacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||||| ||||||||| ||| ||| | || ||||| ||||  |||||| ||||||||||||||||||    
T  50025698 aacataatgtgagtatgagagagaaagttgtacaaaatttataccaaaatggttgtacaaatatcattt 50025766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 343
Target Start/End: Original strand, 53932423 - 53932459
Alignment:
Q  307 caaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||||| ||||||||| ||||||||||||||||||    
T  53932423 caaaaattgtcacaaaatggttgtacaaatatcattt 53932459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 5e-17; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 271 - 348
Target Start/End: Original strand, 582863 - 582940
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatttatcta 348  Q
    |||||| ||||||||||||||| ||| ||||| ||| |||| ||||||||||||||||||| ||||||||||| ||||    
T  582863 taagaatataatatgagtatgagagagaaaattgtttaaaagttatcacaaaatagttgtaaaaatatcatttctcta 582940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 260 - 343
Target Start/End: Original strand, 35098717 - 35098800
Alignment:
Q  260 aagagatatagtaagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||| | |||||||| ||||||||||||||| ||||||||| ||| |||  |||||| ||||| ||||||||||||||||||    
T  35098717 aagagaaagagtaagaatataatatgagtatgagagaaaaaattgtttaaatgttatcaaaaaatggttgtacaaatatcattt 35098800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 6538956 - 6538873
Alignment:
Q  260 aagagatatagtaagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||||| | ||| |||||||| ||| ||||||||| ||| | ||  |||||||||||||||||| |||||||||||||||||    
T  6538956 aagagatagaataaaaacataatgtgaatatgaaagagaaagttgtcaaaaaattatcacaaaataattgtacaaatatcattt 6538873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 269 - 343
Target Start/End: Complemental strand, 7144654 - 7144580
Alignment:
Q  269 agtaagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||||| ||||||||||||||| ||| ||| | ||| |||| |||||| ||||| ||||||||||||||||||    
T  7144654 agtaagaatataatatgagtatgagagagaaagttgtttaaaagttatcataaaatggttgtacaaatatcattt 7144580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 259 - 345
Target Start/End: Complemental strand, 17489435 - 17489349
Alignment:
Q  259 taagagatatagtaagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatttat 345  Q
    ||||||| ||| ||||||  | || ||||||||| ||| ||||| ||  ||||||||||| ||||||||||||||||||||||||||    
T  17489435 taagagagataataagaatgtcatgtgagtatgagagagaaaattgtgtaaaaattatcaaaaaatagttgtacaaatatcatttat 17489349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 278 - 343
Target Start/End: Complemental strand, 38501011 - 38500946
Alignment:
Q  278 ataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||||||||||||||||| ||| | ||  ||||||| ||||||||| ||||||||||||||||||    
T  38501011 ataatatgagtatgaaagagaaagttgtcaaaaaattgtcacaaaatggttgtacaaatatcattt 38500946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 260 - 348
Target Start/End: Original strand, 22402611 - 22402699
Alignment:
Q  260 aagagatatagtaagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatttatcta 348  Q
    |||||||||| ||| | |||||||||||||||| ||||||  | |||||||| || ||||||||||  ||| |||||||||||| ||||    
T  22402611 aagagatataataaaatcataatatgagtatgagagaaaatgttgttcaaaagttgtcacaaaataaatgttcaaatatcatttctcta 22402699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 267 - 343
Target Start/End: Complemental strand, 27440558 - 27440482
Alignment:
Q  267 atagtaagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||| ||||||| ||| ||||||||| ||| ||||| |||||||| || |||||||||  |||||||||||||||||    
T  27440558 ataggaagaacacaatgtgagtatgagagagaaaattgttcaaaagttgtcacaaaatgattgtacaaatatcattt 27440482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 164 - 250
Target Start/End: Complemental strand, 10059751 - 10059664
Alignment:
Q  164 tagagtaatgatatttgtacaattatttgataacgagttttgtgacaatctttcttttctctt-ttttattgataaaaaacaatagag 250  Q
    |||||||||||||||||||||||||||||||||  | ||||||| ||| |||  || ||| || |||||||| | |||||||||||||    
T  10059751 tagagtaatgatatttgtacaattatttgataataacttttgtggcaaccttctttctctattattttattggtcaaaaacaatagag 10059664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 284 - 343
Target Start/End: Original strand, 35464592 - 35464651
Alignment:
Q  284 tgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||||| ||||| ||||| ||||||||||||||| |||||| | |||||||||||||||    
T  35464592 tgagtataaaagagaaaattgttcaaaaattatcaaaaaataatcgtacaaatatcattt 35464651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 261 - 343
Target Start/End: Complemental strand, 40829500 - 40829417
Alignment:
Q  261 agagatatagtaagaacataatatgagtatgaaagaaaaaatcgtt-caaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||||| ||||| || ||||| ||||||||| ||||||||| ||  |||||||||| | ||||| ||||||||||||||||||    
T  40829500 agagataaagtaaaaatataatgtgagtatgagagaaaaaattgtcacaaaaattattaaaaaatggttgtacaaatatcattt 40829417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 343
Target Start/End: Complemental strand, 3167376 - 3167322
Alignment:
Q  289 atgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||||||||||| ||||||||||||| | |||||||||||| ||||| |||||    
T  3167376 atgaaagaaaaaattgttcaaaaattataataaaatagttgtataaataacattt 3167322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 271 - 343
Target Start/End: Original strand, 3263504 - 3263576
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||| ||| || ||||||||| ||||||||| || ||||| || ||||||| | ||||||||||||||||||    
T  3263504 taagaccatcatgtgagtatgagagaaaaaattgtacaaaagttgtcacaaattggttgtacaaatatcattt 3263576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 271 - 343
Target Start/End: Original strand, 24329978 - 24330050
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||||||||||||||||||| ||| ||| | || ||||| || |  ||||||| |||||||||||||||||    
T  24329978 taagaacataatatgagtatgagagagaaagttgtacaaaagttgtaccaaaataattgtacaaatatcattt 24330050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 278 - 349
Target Start/End: Original strand, 38704199 - 38704271
Alignment:
Q  278 ataatatgagtatgaaagaaaaaatcgtt-caaaaattatcacaaaatagttgtacaaatatcatttatctac 349  Q
    ||||| ||||||||| ||||||||| ||| |||||||||||| ||||| | ||| |||||||||||| |||||    
T  38704199 ataatgtgagtatgatagaaaaaattgttgcaaaaattatcataaaatggatgttcaaatatcatttctctac 38704271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 343
Target Start/End: Original strand, 9277620 - 9277679
Alignment:
Q  284 tgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||||||||||| ||| ||||  ||||||||| | ||| ||||||||||||||||||||    
T  9277620 tgagtatgaaagagaaagtcgtcaaaaaattataataaagtagttgtacaaatatcattt 9277679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 15639471 - 15639388
Alignment:
Q  260 aagagatatagtaagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||| | |||||||| ||||| ||||||||| ||||||| | ||  |||| || |||| |||| ||||||||||||||||||    
T  15639471 aagagagagagtaagaatataatgtgagtatgagagaaaaagttgtctaaaagttgtcaccaaatggttgtacaaatatcattt 15639388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 261 - 343
Target Start/End: Complemental strand, 1108066 - 1107984
Alignment:
Q  261 agagatatagtaagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||| ||| ||| |||||||| ||||||||| ||| ||| | || ||||| || | |||||||||| |||||||||||||||    
T  1108066 agagagataataaaaacataatgtgagtatgagagataaagttgtacaaaagttgtaacaaaatagtcgtacaaatatcattt 1107984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 316 - 346
Target Start/End: Complemental strand, 4098653 - 4098623
Alignment:
Q  316 tcacaaaatagttgtacaaatatcatttatc 346  Q
    |||||||||||||||||||||||||||||||    
T  4098653 tcacaaaatagttgtacaaatatcatttatc 4098623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 348
Target Start/End: Original strand, 8787159 - 8787229
Alignment:
Q  278 ataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatttatcta 348  Q
    ||||| ||| ||||| ||||||| | ||  |||||||||||| |||| |||||||||||||||||| ||||    
T  8787159 ataatgtgaatatgagagaaaaacttgtcaaaaaattatcactaaattgttgtacaaatatcatttctcta 8787229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 166 - 212
Target Start/End: Complemental strand, 22402819 - 22402773
Alignment:
Q  166 gagtaatgatatttgtacaattatttgataacgagttttgtgacaat 212  Q
    ||||||||||||||||| ||||||||||| || | ||||||||||||    
T  22402819 gagtaatgatatttgtataattatttgatgacaacttttgtgacaat 22402773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 27005511 - 27005553
Alignment:
Q  307 caaaaattatcacaaaatagttgtacaaatatcatttatctac 349  Q
    |||||||||||| |||||| ||||||||||||||||| |||||    
T  27005511 caaaaattatcaaaaaataattgtacaaatatcatttctctac 27005553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 269 - 343
Target Start/End: Complemental strand, 29803302 - 29803228
Alignment:
Q  269 agtaagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||||| ||||| ||| ||||| ||| ||| | ||| |||| || ||| ||||||||||||||||||||||||    
T  29803302 agtaagaatataatgtgaatatgagagagaaagttgtttaaaagttgtcaaaaaatagttgtacaaatatcattt 29803228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 340
Target Start/End: Original strand, 28042054 - 28042131
Alignment:
Q  263 agatatagtaagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatca 340  Q
    ||||| |||||||| | ||||||||||||||||| |||||  | ||||  || | ||||||||||| |||||||||||    
T  28042054 agatagagtaagaaaacaatatgagtatgaaagagaaaattttgcaaatgttgttacaaaatagttatacaaatatca 28042131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 271 - 343
Target Start/End: Complemental strand, 5996742 - 5996670
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||| ||||| ||| ||||| ||| ||||| ||  ||||||| | | ||||||||||||||||||||||||    
T  5996742 taagaatataatgtgaatatgagagagaaaattgtctaaaaattgttaaaaaatagttgtacaaatatcattt 5996670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 159 - 250
Target Start/End: Complemental strand, 9240309 - 9240217
Alignment:
Q  159 agtagtagagtaatgatatttgtacaattatttgataacgagttttgtgacaatctttcttttctct-tttttattgataaaaaacaatagag 250  Q
    |||| ||||||||| ||||||||||||||||||| | || | |||||||| ||  ||  |||||| | ||||||||| | |||||||||||||    
T  9240309 agtaatagagtaatcatatttgtacaattatttggtgacaacttttgtgataaatttctttttctttatttttattggttaaaaacaatagag 9240217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 343
Target Start/End: Original strand, 14070655 - 14070683
Alignment:
Q  315 atcacaaaatagttgtacaaatatcattt 343  Q
    |||||||||||||||||||||||||||||    
T  14070655 atcacaaaatagttgtacaaatatcattt 14070683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 343
Target Start/End: Original strand, 19844341 - 19844377
Alignment:
Q  307 caaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||| |||||| ||||||||||||||||||||||||    
T  19844341 caaaagttatcaaaaaatagttgtacaaatatcattt 19844377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 271 - 343
Target Start/End: Original strand, 20985525 - 20985597
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||| ||||| ||||||||| ||| ||| | || ||||||||||   ||||| ||||||||||||||||||    
T  20985525 taagaagataatgtgagtatgagagagaaagttgtacaaaaattatacaaaaatggttgtacaaatatcattt 20985597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 343
Target Start/End: Complemental strand, 28501631 - 28501595
Alignment:
Q  307 caaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||||| ||||||||| ||||||||||||||||||    
T  28501631 caaaaattgtcacaaaatggttgtacaaatatcattt 28501595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 271 - 343
Target Start/End: Complemental strand, 32425026 - 32424954
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||| ||||| ||||||||||||| ||| | ||| ||||||||| | ||||| | | ||||||||||||||    
T  32425026 taagaagataatgtgagtatgaaagagaaagttgttaaaaaattattagaaaatgggtatacaaatatcattt 32424954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 308 - 340
Target Start/End: Original strand, 35131290 - 35131322
Alignment:
Q  308 aaaaattatcacaaaatagttgtacaaatatca 340  Q
    ||||||||||||||||| |||||||||||||||    
T  35131290 aaaaattatcacaaaatcgttgtacaaatatca 35131322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 275 - 343
Target Start/End: Complemental strand, 36572762 - 36572694
Alignment:
Q  275 aacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||||| ||||||||||||| | | | ||  |||| || ||||||||||||| ||||||||||||||    
T  36572762 aacataatgtgagtatgaaagagagagttgtcaaaaagttgtcacaaaatagttatacaaatatcattt 36572694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 271 - 343
Target Start/End: Complemental strand, 38010947 - 38010875
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||| ||| || ||||||||| ||| ||||| || ||||| |||||||||| |  |||||||||||||||||    
T  38010947 taagaccatcatgtgagtatgagagagaaaattgtacaaaagttatcacaaattgattgtacaaatatcattt 38010875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 343
Target Start/End: Complemental strand, 40039329 - 40039293
Alignment:
Q  307 caaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  40039329 caaaaattatcaaaaaatagttgttcaaatatcattt 40039293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 7e-16; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 260 - 343
Target Start/End: Original strand, 12697698 - 12697781
Alignment:
Q  260 aagagatatagtaagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||| || ||||||||||||| ||||| ||| ||| ||| | ||||||||||||||| |||||||||||| |||||||||||    
T  12697698 aagagagatggtaagaacataatgtgagtgtgagagagaaagttgttcaaaaattatcataaaatagttgtataaatatcattt 12697781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 278 - 347
Target Start/End: Original strand, 3893401 - 3893470
Alignment:
Q  278 ataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatttatct 347  Q
    ||||| ||||||||| ||||||| | ||||||||||| |  |||||||||||||||||||||||||||||    
T  3893401 ataatgtgagtatgagagaaaaagttgttcaaaaattgtaccaaaatagttgtacaaatatcatttatct 3893470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 271 - 348
Target Start/End: Complemental strand, 14228782 - 14228705
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatttatcta 348  Q
    ||||||||| || ||||||||| ||| ||| | || ||||| ||||||||||||||||||||||||||||||| ||||    
T  14228782 taagaacatcatgtgagtatgagagagaaagttgtacaaaagttatcacaaaatagttgtacaaatatcatttttcta 14228705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 258 - 348
Target Start/End: Original strand, 37784357 - 37784447
Alignment:
Q  258 gtaagagatatagtaagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatttatcta 348  Q
    |||||||| | | ||| |||||||||||||||||| ||| ||||| || ||||| ||||  |||||| |||||||||||||||||| ||||    
T  37784357 gtaagagagagaataaaaacataatatgagtatgagagagaaaattgtacaaaagttataccaaaatggttgtacaaatatcatttctcta 37784447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 294 - 343
Target Start/End: Complemental strand, 29913616 - 29913567
Alignment:
Q  294 agaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||||||| ||| ||||||||||| ||||||||||||||||||||||||    
T  29913616 agaaaaaattgtttaaaaattatcataaaatagttgtacaaatatcattt 29913567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 271 - 343
Target Start/End: Complemental strand, 14531696 - 14531624
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||||||| || | ||||||||||| ||| | || ||||| |||||| ||||||||||||||||||||||||    
T  14531696 taagaacatcatcttagtatgaaagagaaagttgtacaaaagttatcataaaatagttgtacaaatatcattt 14531624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 271 - 343
Target Start/End: Complemental strand, 43186371 - 43186299
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||| ||| || ||||||||| ||| ||| | || ||||||||||||||||||| |||||||||||||||||    
T  43186371 taagaccatcatgtgagtatgagagagaaagttgtacaaaaattatcacaaaataattgtacaaatatcattt 43186299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 6005030 - 6004947
Alignment:
Q  260 aagagatatagtaagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||| | |||||||| ||||| ||||||||| ||| ||| | ||  ||||||| ||||||| ||||||||||||||||||||    
T  6005030 aagagagagagtaagaatataatgtgagtatgagagagaaagttgtctaaaaattgtcacaaagtagttgtacaaatatcattt 6004947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 284 - 343
Target Start/End: Original strand, 32725789 - 32725848
Alignment:
Q  284 tgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||||||| ||||||||| ||  ||||||||||||||| | ||||||||||||||||||    
T  32725789 tgagtatgagagaaaaaattgtctaaaaattatcacaaagtggttgtacaaatatcattt 32725848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 269 - 343
Target Start/End: Complemental strand, 33115983 - 33115908
Alignment:
Q  269 agtaagaacataatatgagtatgaaagaaaaaatcgtt-caaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||| ||||||| || | ||| | ||||||||||||| ||||||||||||||||||| || ||||||||||||||    
T  33115983 agtaaaaacataacataaatatcagagaaaaaatcgttacaaaaattatcacaaaataattatacaaatatcattt 33115908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 278 - 348
Target Start/End: Complemental strand, 3650181 - 3650111
Alignment:
Q  278 ataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatttatcta 348  Q
    ||||||||||||||| ||| ||| | ||| ||||||||| ||||| | |||||||||||||||||| ||||    
T  3650181 ataatatgagtatgagagagaaagttgttaaaaaattattacaaattggttgtacaaatatcatttctcta 3650111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 278 - 343
Target Start/End: Complemental strand, 28927749 - 28927684
Alignment:
Q  278 ataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||| ||||||||| ||||||||| ||| |||| || ||||||| | ||||||||||||||||||    
T  28927749 ataatgtgagtatgagagaaaaaattgttaaaaagttgtcacaaagtggttgtacaaatatcattt 28927684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 271 - 348
Target Start/End: Original strand, 30927927 - 30928004
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatttatcta 348  Q
    ||||| ||| |||||||||||| ||| ||| | || |||||||| ||||||| | |||||||||||||||||| ||||    
T  30927927 taagaccatcatatgagtatgagagagaaagttgtacaaaaattgtcacaaattggttgtacaaatatcatttctcta 30928004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 271 - 343
Target Start/End: Complemental strand, 23952569 - 23952497
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||||||  || ||||||||||| | ||||| || ||||| | ||||||||||| |||||||||||||||||    
T  23952569 taagaacaacatgtgagtatgaaaaagaaaattgtacaaaagtcatcacaaaataattgtacaaatatcattt 23952497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 271 - 343
Target Start/End: Original strand, 33863244 - 33863316
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||| ||||| ||||||||| ||| ||||| ||  ||||||||||| ||||| |||||||| |||||||||    
T  33863244 taagaatataatgtgagtatgagagataaaattgtctaaaaattatcagaaaatggttgtacatatatcattt 33863316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 307 - 343
Target Start/End: Complemental strand, 37343413 - 37343377
Alignment:
Q  307 caaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||||||||||| ||||||||||||||||||||||    
T  37343413 caaaaattatcacataatagttgtacaaatatcattt 37343377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 275 - 343
Target Start/End: Original strand, 39021443 - 39021511
Alignment:
Q  275 aacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||||| ||||||||||||| | | | ||  |||| |||||||||||| ||||||||||||||||||    
T  39021443 aacataatgtgagtatgaaagagagagttgtcaaaaagttatcacaaaatggttgtacaaatatcattt 39021511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 275 - 343
Target Start/End: Original strand, 43873691 - 43873759
Alignment:
Q  275 aacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||||| ||||||||||||| | | | ||  ||||||| ||||||||| ||||||||||||||||||    
T  43873691 aacataatgtgagtatgaaagagagagttgtcaaaaaattgtcacaaaatggttgtacaaatatcattt 43873759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 206 - 343
Target Start/End: Original strand, 44380542 - 44380682
Alignment:
Q  206 tgacaatctttcttttctctttttt-attgataaaaaacaatagagnnnnnnn--gtaagagatatagtaagaacataatatgagtatgaaagaaaaaat 302  Q
    |||||| |||||||||||||||||| |||| | |||||||||||||         |||||||| | ||| |||| ||||| ||||||||| ||| ||| |    
T  44380542 tgacaacctttcttttctcttttttgattggtcaaaaacaatagagagagaaaaagtaagagagagagtcagaatataatgtgagtatgagagagaaagt 44380641  T
Q  303 cgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
     ||| |||  || ||||||||| ||||||||||||||||||    
T  44380642 tgtttaaaggttgtcacaaaatggttgtacaaatatcattt 44380682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 343
Target Start/End: Complemental strand, 6806970 - 6806911
Alignment:
Q  284 tgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||||||| ||||||||| ||| |||| || |||||||||  |||||||||||||||||    
T  6806970 tgagtatgagagaaaaaattgtttaaaagttgtcacaaaatgattgtacaaatatcattt 6806911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 343
Target Start/End: Original strand, 6849246 - 6849329
Alignment:
Q  260 aagagatatagtaagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||| | |||||||| ||||| ||||||||||||| ||| | ||  |||| || ||||||||| |||||| |||||||||||    
T  6849246 aagagagagagtaagaatataatgtgagtatgaaagataaagttgtctaaaagttgtcacaaaatggttgtataaatatcattt 6849329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 166 - 225
Target Start/End: Original strand, 8142903 - 8142962
Alignment:
Q  166 gagtaatgatatttgtacaattatttgataacgagttttgtgacaatctttcttttctct 225  Q
    |||| |||||||||| ||||||||||||| || | ||||||||||| ||| |||||||||    
T  8142903 gagtgatgatatttgaacaattatttgatgacaacttttgtgacaaccttccttttctct 8142962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 343
Target Start/End: Original strand, 21273695 - 21273778
Alignment:
Q  260 aagagatatagtaagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||| ||| ||| |||||||| ||||||||| ||| ||||| ||  | || || ||||||||| ||||||||||||||||||    
T  21273695 aagagagataataaaaacataatgtgagtatgagagataaaattgtcaagaagttgtcacaaaatggttgtacaaatatcattt 21273778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 342
Target Start/End: Original strand, 32234448 - 32234519
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatt 342  Q
    |||||| ||||| ||| ||||||||| ||||| ||  |||||||||   |||||||||||||||||||||||    
T  32234448 taagaagataatgtgaatatgaaagagaaaattgtataaaaattatataaaaatagttgtacaaatatcatt 32234519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 305 - 343
Target Start/End: Original strand, 2952688 - 2952726
Alignment:
Q  305 ttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||||||  ||||||||||||||||||||||||||||    
T  2952688 ttcaaaaatcgtcacaaaatagttgtacaaatatcattt 2952726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 269 - 343
Target Start/End: Original strand, 14548817 - 14548891
Alignment:
Q  269 agtaagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||||| ||||| ||||||||| ||| ||| | ||  ||||||||| | ||||| ||||||||||||||||||    
T  14548817 agtaagaatataatgtgagtatgagagagaaagttgtctaaaaattattaaaaaatggttgtacaaatatcattt 14548891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 281 - 343
Target Start/End: Original strand, 28623117 - 28623179
Alignment:
Q  281 atatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||||||||||||| ||| | ||  |||| |||||||| ||| ||||||||||||||||||    
T  28623117 atatgagtatgaaagagaaagttgtcaaaaagttatcacataatggttgtacaaatatcattt 28623179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 348
Target Start/End: Complemental strand, 4312587 - 4312546
Alignment:
Q  307 caaaaattatcacaaaatagttgtacaaatatcatttatcta 348  Q
    |||||||||||| ||||||||||| |||||||||||| ||||    
T  4312587 caaaaattatcataaaatagttgttcaaatatcatttctcta 4312546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 246
Target Start/End: Complemental strand, 33817336 - 33817259
Alignment:
Q  170 aatgatatttgtacaattatttgataacgagttttgtgacaatctttcttttctct-tttttattgataaaaaacaat 246  Q
    |||||||||||||||  ||||| ||||| | ||| |||||||||||  |||||||| ||||||||| | |||||||||    
T  33817336 aatgatatttgtacatctatttcataacaattttagtgacaatcttgtttttctctctttttattggtcaaaaacaat 33817259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 166 - 211
Target Start/End: Complemental strand, 36805195 - 36805150
Alignment:
Q  166 gagtaatgatatttgtacaattatttgataacgagttttgtgacaa 211  Q
    ||||||||||||||||||||| |||||||||  | |||||||||||    
T  36805195 gagtaatgatatttgtacaatcatttgataataacttttgtgacaa 36805150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 202 - 250
Target Start/End: Original strand, 2733891 - 2733938
Alignment:
Q  202 tttgtgacaatctttcttttctcttttttattgataaaaaacaatagag 250  Q
    ||||||||||| ||| || ||| ||||||||||||||||||||||||||    
T  2733891 tttgtgacaattttttttctct-ttttttattgataaaaaacaatagag 2733938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 271 - 347
Target Start/End: Original strand, 18411291 - 18411367
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatttatct 347  Q
    |||||||||||| | ||||||| ||| ||| | || ||||| || |  |||||| ||||||||||||||||||||||    
T  18411291 taagaacataatgttagtatgagagataaatttgtacaaaagttgtaccaaaattgttgtacaaatatcatttatct 18411367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 271 - 343
Target Start/End: Original strand, 22203211 - 22203283
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||| ||||||||||||||| |||||| || || ||||| || |   ||||| ||||||||||||||||||    
T  22203211 taagaagataatatgagtatgagagaaaatattgtacaaaagttgtacaaaaatggttgtacaaatatcattt 22203283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 201 - 245
Target Start/End: Complemental strand, 27071269 - 27071225
Alignment:
Q  201 ttttgtgacaatctttcttttctcttttttattgataaaaaacaa 245  Q
    |||||||| ||||||  |||||| |||||||||||||||||||||    
T  27071269 ttttgtgataatcttatttttcttttttttattgataaaaaacaa 27071225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 275 - 343
Target Start/End: Original strand, 32674232 - 32674300
Alignment:
Q  275 aacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||||| ||||||||| ||| ||| | || ||||| ||||  |||||| ||||||||||||||||||    
T  32674232 aacataatgtgagtatgagagagaaagttgtacaaaagttataccaaaatggttgtacaaatatcattt 32674300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 343
Target Start/End: Complemental strand, 35345459 - 35345423
Alignment:
Q  307 caaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||||||| ||||||| ||||||||||||||||||    
T  35345459 caaaaattattacaaaatggttgtacaaatatcattt 35345423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 284 - 348
Target Start/End: Complemental strand, 36064092 - 36064028
Alignment:
Q  284 tgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatttatcta 348  Q
    ||||||||| ||| ||||| || ||||| || |||||||||  ||||||||||||||||| ||||    
T  36064092 tgagtatgagagagaaaattgtccaaaagttgtcacaaaatgattgtacaaatatcatttctcta 36064028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 283 - 343
Target Start/End: Original strand, 40614198 - 40614258
Alignment:
Q  283 atgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||| ||||| ||| | ||| ||||||||||||||| ||| |||||||| |||||||||||    
T  40614198 atgaatatgagagatataattgttcaaaaattatcataaagtagttgtataaatatcattt 40614258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 40723354 - 40723418
Alignment:
Q  166 gagtaatgatatttgtacaattatttgataacgagttttgtgacaatctttcttttctctttttt 230  Q
    ||||||||||||||||||||| ||||||| || | |||| ||||||  ||| |||||| ||||||    
T  40723354 gagtaatgatatttgtacaatcatttgatgacaatttttatgacaacttttattttctttttttt 40723418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 275 - 347
Target Start/End: Original strand, 41675369 - 41675441
Alignment:
Q  275 aacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatttatct 347  Q
    |||||||| | ||||||||| | ||| | ||  ||||||||||| |||||  |||||||||||||||||||||    
T  41675369 aacataatgtaagtatgaaaaataaagttgtaaaaaaattatcaaaaaatgattgtacaaatatcatttatct 41675441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 347
Target Start/End: Complemental strand, 44064396 - 44064356
Alignment:
Q  307 caaaaattatcacaaaatagttgtacaaatatcatttatct 347  Q
    |||||||| ||||||||||| ||| ||||||||||||||||    
T  44064396 caaaaattgtcacaaaatagatgttcaaatatcatttatct 44064356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 164 - 343
Target Start/End: Complemental strand, 32901514 - 32901332
Alignment:
Q  164 tagagtaatgatatttgtacaattatttgataacgagttttgtgacaatctttcttttctct-tttttattgataaaaaacaat--agagnnnnnnngta 260  Q
    ||||||| |||||||||||||   | ||||| |  | ||| |||||||||||  |||||||| ||||||||| | |||||||||  ||||       |||    
T  32901514 tagagtagtgatatttgtacatccaattgatgataattttggtgacaatcttgtttttctctctttttattggtcaaaaacaatggagagagaaaaagta 32901415  T
Q  261 agagatatagtaagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||| ||| ||||||  | || ||||||||||||| ||| | || |||||||||||| ||||||||||||||||||||||||    
T  32901414 agagagataataagaatgtcatgtgagtatgaaagagaaagttgtgcaaaaattatcaaaaaatagttgtacaaatatcattt 32901332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 271 - 347
Target Start/End: Complemental strand, 26740045 - 26739969
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatttatct 347  Q
    |||||||||||| |||| |||||||| ||  | ||||||||||||||||||||| |||||| ||||||| |||||||    
T  26740045 taagaacataatgtgagaatgaaagataacgttgttcaaaaattatcacaaaatggttgtataaatatcgtttatct 26739969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 271 - 343
Target Start/End: Complemental strand, 39449247 - 39449176
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||||||| || ||||||||| ||||||||| || ||||| ||||||||||||||||||| |||||||||||    
T  39449247 taagaacatgatgtgagtatgagagaaaaaattgt-caaaagttatcacaaaatagttgtataaatatcattt 39449176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 343
Target Start/End: Original strand, 45548793 - 45548852
Alignment:
Q  284 tgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||||||||||||||| | ||  ||||||||||||||||| ||||||||||||||||||    
T  45548793 tgagtatgaaagaaaaagttgtcaaaaaattatcacaaaatggttgtacaaatatcattt 45548852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 269 - 343
Target Start/End: Complemental strand, 54801075 - 54801001
Alignment:
Q  269 agtaagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||||| ||||| ||||||||||||| ||||| ||  |||| |||||||||| | ||||||||||||||||||    
T  54801075 agtaagaatataatgtgagtatgaaagataaaattgtctaaaagttatcacaaagtggttgtacaaatatcattt 54801001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 307 - 343
Target Start/End: Original strand, 32303317 - 32303353
Alignment:
Q  307 caaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||||||||||||||||||||||||||||||||||    
T  32303317 caaaaattatcacaaaatagttgtacaaatatcattt 32303353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 307 - 347
Target Start/End: Original strand, 52487301 - 52487341
Alignment:
Q  307 caaaaattatcacaaaatagttgtacaaatatcatttatct 347  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  52487301 caaaaattatcacaaattagttgtacaaatatcatttatct 52487341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 269 - 348
Target Start/End: Complemental strand, 34259892 - 34259813
Alignment:
Q  269 agtaagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatttatcta 348  Q
    |||||||| ||||| ||||||||| ||| ||| | |||||| | || ||||||||| |||||||||||||||||| ||||    
T  34259892 agtaagaagataatgtgagtatgagagagaaagttgttcaacagttgtcacaaaatggttgtacaaatatcatttctcta 34259813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 269 - 343
Target Start/End: Original strand, 44272804 - 44272878
Alignment:
Q  269 agtaagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||||| ||||| ||||||||| ||| ||| | ||| |||| || ||| ||||||||||||||||||||||||    
T  44272804 agtaagaatataatgtgagtatgagagagaaagttgtttaaaagttgtcaaaaaatagttgtacaaatatcattt 44272878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 271 - 348
Target Start/End: Original strand, 9472509 - 9472586
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatttatcta 348  Q
    |||||| ||||| ||||||||| ||| ||| | ||  ||||||||| | |||||||||||||||||||||||| ||||    
T  9472509 taagaagataatgtgagtatgagagagaaagttgtcaaaaaattattagaaaatagttgtacaaatatcatttctcta 9472586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 30250300 - 30250373
Alignment:
Q  275 aacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatttatcta 348  Q
    |||||||| ||||||||| ||||||| | || ||| | || |  ||||||||||||||||||||||||||||||    
T  30250300 aacataatgtgagtatgagagaaaaagttgtacaatagttttaccaaaatagttgtacaaatatcatttatcta 30250373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 258 - 347
Target Start/End: Original strand, 47519703 - 47519792
Alignment:
Q  258 gtaagagatatagtaagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatttatct 347  Q
    |||||||||| | ||| ||||| || ||||||||| ||| ||| | |||||||| || | ||||||| | ||||||||||||||||||||    
T  47519703 gtaagagatagaataacaacatcatgtgagtatgagagagaaagttgttcaaaagttgttacaaaatggatgtacaaatatcatttatct 47519792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 267 - 348
Target Start/End: Complemental strand, 48414282 - 48414201
Alignment:
Q  267 atagtaagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatttatcta 348  Q
    ||||||||||||| || ||||||| ||||| |   | ||| |||| ||||||||||||| ||||| ||||||||||||||||    
T  48414282 atagtaagaacatgatgtgagtataaaagagagggttgtttaaaatttatcacaaaataattgtataaatatcatttatcta 48414201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 260 - 348
Target Start/End: Complemental strand, 43864119 - 43864032
Alignment:
Q  260 aagagatatagtaagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatttatcta 348  Q
    |||||| ||| ||| || ||||| ||||||||| ||||||| | || |||||||| |  ||||||||||||||||||||||||| ||||    
T  43864119 aagagagataataaaaatataatgtgagtatgagagaaaaagttgt-caaaaattgtaccaaaatagttgtacaaatatcatttctcta 43864032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 271 - 343
Target Start/End: Original strand, 53662424 - 53662496
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||||||| || ||| ||||| ||| ||| | || |||||||| | ||||||||||||||||||||||||||    
T  53662424 taagaacatcatgtgaatatgagagagaaagttgtacaaaaattgttacaaaatagttgtacaaatatcattt 53662496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 271 - 343
Target Start/End: Original strand, 54803324 - 54803396
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||||||||| ||||||||| ||| ||| | || ||||||||    |||||||||||||||||||||||||    
T  54803324 taagaacataatgtgagtatgagagagaaagttgtacaaaaattgcaccaaaatagttgtacaaatatcattt 54803396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 308 - 343
Target Start/End: Original strand, 940292 - 940327
Alignment:
Q  308 aaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||||| ||||||||||||||||||||||||||||    
T  940292 aaaaattgtcacaaaatagttgtacaaatatcattt 940327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 304 - 343
Target Start/End: Complemental strand, 12074514 - 12074475
Alignment:
Q  304 gttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||||||||||||| |||||||||||| |||||||||||    
T  12074514 gttcaaaaattatcataaaatagttgtataaatatcattt 12074475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 307 - 342
Target Start/End: Original strand, 15847415 - 15847450
Alignment:
Q  307 caaaaattatcacaaaatagttgtacaaatatcatt 342  Q
    ||||||||||| ||||||||||||||||||||||||    
T  15847415 caaaaattatctcaaaatagttgtacaaatatcatt 15847450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 338
Target Start/End: Complemental strand, 17805527 - 17805460
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatat 338  Q
    |||||| ||||| ||||||||| ||| ||||| ||  ||||||||| | |||||||||||||||||||    
T  17805527 taagaaaataatgtgagtatgagagagaaaattgtcaaaaaattattaaaaaatagttgtacaaatat 17805460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 307 - 342
Target Start/End: Original strand, 33484140 - 33484175
Alignment:
Q  307 caaaaattatcacaaaatagttgtacaaatatcatt 342  Q
    |||||||||||||||||| |||||||||||||||||    
T  33484140 caaaaattatcacaaaatggttgtacaaatatcatt 33484175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 343
Target Start/End: Original strand, 36728631 - 36728690
Alignment:
Q  284 tgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||| ||||||||||||| || |||||||| ||| ||||| || |||||||||||||||    
T  36728631 tgagtgtgaaagaaaaaattgtgcaaaaattgtcaaaaaatggtcgtacaaatatcattt 36728690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 343
Target Start/End: Original strand, 40161687 - 40161769
Alignment:
Q  260 aagagatatagtaagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||||| | |||||||  |||| |||||||||||| |||||  || |||| |||||||||||| ||| ||||||||||||||    
T  40161687 aagagatagattaagaacgcaatacgagtatgaaagataaaattatttaaaagttatcacaaaatggtt-tacaaatatcattt 40161769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 348
Target Start/End: Complemental strand, 40847447 - 40847368
Alignment:
Q  269 agtaagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatttatcta 348  Q
    |||||||| ||||| ||||||||| ||| ||||| ||  ||||||| | |||||||| |||||||||||| |||| ||||    
T  40847447 agtaagaatataatgtgagtatgagagagaaaatggtctaaaaattgttacaaaataattgtacaaatataatttctcta 40847368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 165 - 250
Target Start/End: Complemental strand, 6686230 - 6686144
Alignment:
Q  165 agagtaatgatatttgtacaattatttgataacgagttttgtgacaatctttcttttctct-tttttattgataaaaaacaatagag 250  Q
    |||||||||||||||| |||||  |||| | |  | |||||||||||||| |||||||||| || |||||| | |||||||||||||    
T  6686230 agagtaatgatatttgaacaatcttttggtgataatttttgtgacaatctatcttttctctcttcttattggtcaaaaacaatagag 6686144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 269 - 343
Target Start/End: Complemental strand, 8455938 - 8455864
Alignment:
Q  269 agtaagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||| || ||||| ||||||| | ||| ||| | |||||||| || |||||||||||||||||||||| |||||    
T  8455938 agtaaaaatataatgtgagtattagagagaaagttgttcaaaagttgtcacaaaatagttgtacaaataacattt 8455864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 309 - 343
Target Start/End: Original strand, 32464638 - 32464672
Alignment:
Q  309 aaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||||||| ||||||||||||||||||||||||    
T  32464638 aaaattatcataaaatagttgtacaaatatcattt 32464672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 343
Target Start/End: Original strand, 32541709 - 32541774
Alignment:
Q  280 aatatgagtatgaaaga--aaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||| |||||||||||  |||||| ||||||||||||| | |||||||||  |||||||||||||    
T  32541709 aatataagtatgaaagagaaaaaattgttcaaaaattataataaaatagttccacaaatatcattt 32541774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 284 - 346
Target Start/End: Original strand, 34114126 - 34114188
Alignment:
Q  284 tgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatttatc 346  Q
    ||||||||| ||||||| | ||  |||| |||| | |||||||||||||||||||||||||||    
T  34114126 tgagtatgagagaaaaagttgtcaaaaagttataataaaatagttgtacaaatatcatttatc 34114188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 269 - 343
Target Start/End: Original strand, 44495988 - 44496062
Alignment:
Q  269 agtaagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||||| ||||||||| ||||| ||| |||||  |  ||||||||||| |||||| |||||||| ||||||||    
T  44495988 agtaagaatataatatgaatatgagagagaaaattatctaaaaattatcaaaaaataattgtacaactatcattt 44496062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 261 - 350
Target Start/End: Original strand, 53654736 - 53654825
Alignment:
Q  261 agagatatagtaagaacataatatgagtatgaaagaaaaaatcgtt-caaaaattatcacaaaatagttgtacaaatatcatttatctact 350  Q
    ||||||| ||||| || ||||||||| ||||||||| ||| | ||  |||||||||||| ||||||| ||| |||||||||||| ||||||    
T  53654736 agagataaagtaaaaa-ataatatgaatatgaaagagaaagttgtcacaaaaattatcataaaatagatgttcaaatatcatttctctact 53654825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 348
Target Start/End: Original strand, 53781840 - 53781909
Alignment:
Q  278 ataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatttatcta 348  Q
    ||||| ||||||||||||| ||||| ||  |||| || | |||||||||||||||||||||||||| ||||    
T  53781840 ataatgtgagtatgaaagagaaaattgtataaaagttgt-acaaaatagttgtacaaatatcatttctcta 53781909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 166 - 250
Target Start/End: Original strand, 2613505 - 2613590
Alignment:
Q  166 gagtaatgatatttgtacaattatttgataacgagttttgtgacaatctttcttttctct-tttttattgataaaaaacaatagag 250  Q
    ||||||||||||||| ||||  |||||||||| | ||||||||||||||   || ||||| |||| |||| | |||||||||||||    
T  2613505 gagtaatgatatttgaacaaccatttgataacaacttttgtgacaatctactttctctctcttttaattggtcaaaaacaatagag 2613590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 286 - 343
Target Start/End: Complemental strand, 19879833 - 19879776
Alignment:
Q  286 agtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||||| ||| | ||| ||||||||||||||| |||||  |||||||||||||||||    
T  19879833 agtatgagagagagaattgttcaaaaattatcataaaatgattgtacaaatatcattt 19879776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 348
Target Start/End: Complemental strand, 20056435 - 20056394
Alignment:
Q  307 caaaaattatcacaaaatagttgtacaaatatcatttatcta 348  Q
    |||||||||| ||| |||||||||||||||||||||| ||||    
T  20056435 caaaaattataacataatagttgtacaaatatcatttctcta 20056394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 275 - 339
Target Start/End: Original strand, 22027441 - 22027506
Alignment:
Q  275 aacataatatgagtatgaaagaaaaaatcgtt-caaaaattatcacaaaatagttgtacaaatatc 339  Q
    |||||||||||||||||| ||| ||||| ||  |||||| |||||||||||| |||||||| ||||    
T  22027441 aacataatatgagtatgagagagaaaattgtcacaaaaaatatcacaaaataattgtacaagtatc 22027506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 348
Target Start/End: Original strand, 31804325 - 31804402
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatttatcta 348  Q
    |||||| ||||| ||||||||| ||| |||||  |  ||||||||||||||| |  ||||||||||||||||| ||||    
T  31804325 taagaatataatctgagtatgagagagaaaattatcaaaaaattatcacaaagtgattgtacaaatatcatttctcta 31804402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 275 - 343
Target Start/End: Original strand, 31995915 - 31995984
Alignment:
Q  275 aacataatatgagtatgaaagaaaaaatcgtt-caaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||||||| | ||||||||| |||||  |  ||||| |||||| ||||||||||||||||||||||||    
T  31995915 aacataatataaatatgaaagataaaattatcacaaaatttatcaaaaaatagttgtacaaatatcattt 31995984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 343
Target Start/End: Original strand, 36444398 - 36444463
Alignment:
Q  278 ataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||| ||||||||| ||| ||| | ||| |||| |||||| ||||| ||||||||||||||||||    
T  36444398 ataatgtgagtatgagagagaaagttgttaaaaagttatcataaaatggttgtacaaatatcattt 36444463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 166 - 250
Target Start/End: Original strand, 41609560 - 41609645
Alignment:
Q  166 gagtaatgatatttgtacaattatttgataacgagttttgtgacaatctttcttttctct-tttttattgataaaaaacaatagag 250  Q
    ||||||||||||||| ||||  ||||||| || | ||||||||||||||   |||||||| |||| |||| | |||||||||||||    
T  41609560 gagtaatgatatttgaacaaccatttgatgacaatttttgtgacaatctactttttctctcttttaattggtcaaaaacaatagag 41609645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 45779291 - 45779364
Alignment:
Q  275 aacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatttatcta 348  Q
    ||||| |||||||||||| | | ||| | ||  ||||||||| |||||||||||||| ||||||||||| ||||    
T  45779291 aacatcatatgagtatgagaaagaaagttgtcaaaaaattataacaaaatagttgtataaatatcatttctcta 45779364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 48791597 - 48791670
Alignment:
Q  275 aacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatttatcta 348  Q
    |||||||| ||||||||| || |||| | ||  |||||||||   |||||||||||||||||||||||| ||||    
T  48791597 aacataatgtgagtatgagagtaaaagttgtctaaaaattatacaaaaatagttgtacaaatatcatttctcta 48791670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 343
Target Start/End: Complemental strand, 51318771 - 51318706
Alignment:
Q  278 ataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||| ||||||||| |||| |||| ||  |||| |||||||||| | ||||||||||||||||||    
T  51318771 ataatgtgagtatgatagaagaaattgtcaaaaagttatcacaaagtggttgtacaaatatcattt 51318706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 343
Target Start/End: Original strand, 54251453 - 54251518
Alignment:
Q  278 ataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||||||||||||  || ||| | ||  ||||||||| | ||||||||||||||||||||||||    
T  54251453 ataatatgagtatgagggagaaagttgtcgaaaaattattaaaaaatagttgtacaaatatcattt 54251518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 271 - 343
Target Start/End: Original strand, 4100751 - 4100823
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||||||| || ||||||||| ||| ||||| || |||||  | ||||||||| |||| |||||||||||||    
T  4100751 taagaacattatgtgagtatgagagagaaaattgtacaaaaggtgtcacaaaatggttgaacaaatatcattt 4100823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 308 - 348
Target Start/End: Complemental strand, 4914944 - 4914904
Alignment:
Q  308 aaaaattatcacaaaatagttgtacaaatatcatttatcta 348  Q
    ||||||| ||||||||||||||| |||||||||||| ||||    
T  4914944 aaaaattgtcacaaaatagttgttcaaatatcatttctcta 4914904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 163 - 246
Target Start/End: Original strand, 33483991 - 33484075
Alignment:
Q  163 gtagagtaatgatatttgtacaattatttgataacgagttttgtgacaatctttcttttctct-tttttattgataaaaaacaat 246  Q
    ||||||||||||||||||||||   | ||||| || | ||| ||||||| ||| ||||||||| || |||||||| |||||||||    
T  33483991 gtagagtaatgatatttgtacatccaattgatgacaactttggtgacaaccttacttttctctcttcttattgatcaaaaacaat 33484075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 316 - 348
Target Start/End: Complemental strand, 35017183 - 35017151
Alignment:
Q  316 tcacaaaatagttgtacaaatatcatttatcta 348  Q
    |||||||||||||||||||||||||||| ||||    
T  35017183 tcacaaaatagttgtacaaatatcatttctcta 35017151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 166 - 194
Target Start/End: Complemental strand, 40090866 - 40090838
Alignment:
Q  166 gagtaatgatatttgtacaattatttgat 194  Q
    |||||||||||||||||||||||||||||    
T  40090866 gagtaatgatatttgtacaattatttgat 40090838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 275 - 343
Target Start/End: Complemental strand, 40258276 - 40258208
Alignment:
Q  275 aacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||| |||| ||||||| ||| ||| |  |||||||||||||| ||||| |||||| |||||||||||    
T  40258276 aacatcatataagtatgagagagaaagttattcaaaaattatcataaaatggttgtataaatatcattt 40258208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 348
Target Start/End: Complemental strand, 40308515 - 40308439
Alignment:
Q  272 aagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatttatcta 348  Q
    ||||| ||||| ||||||||||||| ||| | ||  ||||||||| | |||||  ||||||||||||||||| ||||    
T  40308515 aagaatataatgtgagtatgaaagagaaagttgtcaaaaaattattataaaatgattgtacaaatatcatttttcta 40308439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 284 - 348
Target Start/End: Original strand, 40629349 - 40629413
Alignment:
Q  284 tgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatttatcta 348  Q
    ||||||||| ||| ||| | || ||||  |||| |||||||||||||||||||||||||| ||||    
T  40629349 tgagtatgagagagaaagttgtccaaaggttattacaaaatagttgtacaaatatcatttctcta 40629413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 203 - 250
Target Start/End: Original strand, 41734791 - 41734839
Alignment:
Q  203 ttgtgacaatctttcttttctcttt-tttattgataaaaaacaatagag 250  Q
    |||||||||  |||||||||||| | |||||||||||||||||||||||    
T  41734791 ttgtgacaacatttcttttctctatctttattgataaaaaacaatagag 41734839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 275 - 343
Target Start/End: Original strand, 45176735 - 45176803
Alignment:
Q  275 aacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||| || ||||||||||||| ||| |  || ||||||| | |||||||| |||||||||||||||||    
T  45176735 aacatcatgtgagtatgaaagagaaagttattaaaaaattgtaacaaaataattgtacaaatatcattt 45176803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 316 - 348
Target Start/End: Complemental strand, 47014969 - 47014937
Alignment:
Q  316 tcacaaaatagttgtacaaatatcatttatcta 348  Q
    |||||||||||||||||||||||||||| ||||    
T  47014969 tcacaaaatagttgtacaaatatcatttctcta 47014937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 278 - 343
Target Start/End: Original strand, 43755681 - 43755746
Alignment:
Q  278 ataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||||||||||||||||| ||||| ||  ||||||||||| ||||| ||||||||||||||||||    
T  43755681 ataatatgagtatgaaagagaaaattgtcaaaaaattatcataaaatggttgtacaaatatcattt 43755746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 271 - 343
Target Start/End: Original strand, 45350091 - 45350163
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||| ||||| ||||||||| |||||||||  |  |||||||||||||||||| |||||||||||||||||    
T  45350091 taagaatataatgtgagtatgagagaaaaaattatctaaaaattatcacaaaataattgtacaaatatcattt 45350163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 27352716 - 27352633
Alignment:
Q  260 aagagatatagtaagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||| | |||||||| ||||| ||||||||| ||| ||| | || ||||| |||||||||||| ||||||||||||||||||    
T  27352716 aagagagagagtaagaatataatgtgagtatgagagagaaagttgtccaaaagttatcacaaaatggttgtacaaatatcattt 27352633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 260 - 343
Target Start/End: Original strand, 42299171 - 42299254
Alignment:
Q  260 aagagatatagtaagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||||| ||||| || ||||||||| ||||| | ||||||| ||  ||||||||||||||||| ||||||||||||| ||||    
T  42299171 aagagatagagtaaaaatataatatgaatatgagaaaaaaaattgtctaaaaattatcacaaaatggttgtacaaatattattt 42299254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 269 - 342
Target Start/End: Complemental strand, 5043169 - 5043096
Alignment:
Q  269 agtaagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatt 342  Q
    |||||||| ||||| ||| ||||||||| ||| |  || |||||||||||||||||| ||||||||||||||||    
T  5043169 agtaagaatataatgtgaatatgaaagagaaagttatttaaaaattatcacaaaataattgtacaaatatcatt 5043096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 275 - 343
Target Start/End: Complemental strand, 25672413 - 25672344
Alignment:
Q  275 aacataatatgagtatgaaagaaaaaatcgtt-caaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||||||| ||||||||||| ||| | ||| |||||||||||| ||||| ||||||||||||||||||    
T  25672413 aacataatataagtatgaaagataaagttgttacaaaaattatcaaaaaattgttgtacaaatatcattt 25672344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 343
Target Start/End: Original strand, 50145784 - 50145869
Alignment:
Q  258 gtaagagatatagtaagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||||| ||  ||| ||||| |||||||||||| ||| |||||  ||||||| || ||||||||||||||||||||||| ||||    
T  50145784 gtaagagagatgataacaacatcatatgagtatgagagagaaaattattcaaaagttgtcacaaaatagttgtacaaatattattt 50145869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 271 - 343
Target Start/End: Complemental strand, 23554826 - 23554754
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||| ||||| ||||||||| ||| ||| | ||| ||||||||||| ||||| ||||||||||||||||||    
T  23554826 taagaatataatgtgagtatgagagataaagttgtttaaaaattatcaaaaaatggttgtacaaatatcattt 23554754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 271 - 343
Target Start/End: Complemental strand, 32966342 - 32966270
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||| |||||||||| |||| |||||||||  || ||||||| ||||||| | ||||||||||||||||||    
T  32966342 taagaatataatatgagaatgagagaaaaaattatttaaaaattgtcacaaagtggttgtacaaatatcattt 32966270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 288 - 343
Target Start/End: Original strand, 26585186 - 26585241
Alignment:
Q  288 tatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||| ||||||| | || ||||| |||||||||||||||||||||||||||||||    
T  26585186 tatgagagaaaaagttgtacaaaagttatcacaaaatagttgtacaaatatcattt 26585241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 164 - 215
Target Start/End: Original strand, 26982286 - 26982337
Alignment:
Q  164 tagagtaatgatatttgtacaattatttgataacgagttttgtgacaatctt 215  Q
    ||||||||||||||||| | ||||||||||| |||| |||||||||||||||    
T  26982286 tagagtaatgatatttggataattatttgatgacgatttttgtgacaatctt 26982337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 32821721 - 32821638
Alignment:
Q  260 aagagatatagtaagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||| | |||||||| ||||| ||||||||| ||| ||||| ||| |||| || ||||||| | ||||||||||||||||||    
T  32821721 aagagagagagtaagaatataatgtgagtatgagagagaaaattgtttaaaagttgtcacaaagtggttgtacaaatatcattt 32821638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 269 - 343
Target Start/End: Original strand, 9882653 - 9882727
Alignment:
Q  269 agtaagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||||||||||||||| ||||| ||| ||| | ||  |||  || ||||||||||||||||||||||||||||    
T  9882653 agtaagaacataatatgaatatgagagataaagttgtcaaaatgttgtcacaaaatagttgtacaaatatcattt 9882727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 269 - 343
Target Start/End: Original strand, 13355052 - 13355126
Alignment:
Q  269 agtaagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||| ||||||| ||||||||  |||| |||||  |||||||||| || ||||||||||||| |||||||||||    
T  13355052 agtaaaaacataacatgagtattgaagagaaaattattcaaaaattgtcgcaaaatagttgtaaaaatatcattt 13355126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 345
Target Start/End: Original strand, 25994948 - 25994986
Alignment:
Q  307 caaaaattatcacaaaatagttgtacaaatatcatttat 345  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  25994948 caaaaattatcacaaaataattgtacaaatatcatttat 25994986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 271 - 348
Target Start/End: Original strand, 7371944 - 7372021
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatttatcta 348  Q
    ||||| ||| |||| ||||||| ||| ||||| || |||||||| ||| ||| |||||||||||||||||||| ||||    
T  7371944 taagaccatcatataagtatgagagagaaaattgtacaaaaattgtcataaattagttgtacaaatatcatttctcta 7372021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 307 - 348
Target Start/End: Complemental strand, 26101433 - 26101392
Alignment:
Q  307 caaaaattatcacaaaatagttgtacaaatatcatttatcta 348  Q
    ||||||||||||||||||| ||||||||||||||||| ||||    
T  26101433 caaaaattatcacaaaataattgtacaaatatcatttctcta 26101392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 271 - 348
Target Start/End: Complemental strand, 36794690 - 36794613
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatttatcta 348  Q
    |||||| ||||| ||||||||||||| ||| |  | ||||||||||  ||||||| ||||||||||||||||| ||||    
T  36794690 taagaatataatctgagtatgaaagagaaatttatccaaaaattataccaaaataattgtacaaatatcatttctcta 36794613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 278 - 343
Target Start/End: Complemental strand, 45042329 - 45042264
Alignment:
Q  278 ataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||| ||||||||| ||||||||| ||  ||||||| | | ||||||||||||||||||||||||    
T  45042329 ataatgtgagtatgagagaaaaaattgtcaaaaaattgttagaaaatagttgtacaaatatcattt 45042264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 271 - 343
Target Start/End: Complemental strand, 3919375 - 3919303
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||| |||||  |||||||| ||| ||| | || |||||||||| ||||||| ||||||||||||||||||    
T  3919375 taagaatataatgcgagtatgagagagaaagttgtccaaaaattataacaaaatggttgtacaaatatcattt 3919303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 269 - 345
Target Start/End: Original strand, 8757512 - 8757588
Alignment:
Q  269 agtaagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatttat 345  Q
    |||||||| ||||||||||| ||| ||| ||| | || |||||||||||| ||||| |||||| ||||||| |||||    
T  8757512 agtaagaatataatatgagtgtgagagagaaagttgtccaaaaattatcataaaattgttgtataaatatcttttat 8757588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 275 - 343
Target Start/End: Complemental strand, 11038333 - 11038265
Alignment:
Q  275 aacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||||| ||||||||||||| ||| | || ||||||||||  |||||| |||||| |||||||||||    
T  11038333 aacataatgtgagtatgaaagagaaagttgtacaaaaattataccaaaatggttgtataaatatcattt 11038265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 271 - 343
Target Start/End: Complemental strand, 14247739 - 14247667
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||||||| | ||||||||| ||| ||| | ||  ||||||||||||||| | ||||||||||||||||||    
T  14247739 taagaacatagtgtgagtatgagagagaaagttgtcaaaaaattatcacaaagtcgttgtacaaatatcattt 14247667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 271 - 343
Target Start/End: Original strand, 20268509 - 20268581
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||| ||||||||| | ||||||| ||| | ||| ||||||| | | ||||||||||||||||||||||||    
T  20268509 taagaatataatatgaatgtgaaagataaagttgttaaaaaattgttataaaatagttgtacaaatatcattt 20268581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 271 - 343
Target Start/End: Original strand, 21854460 - 21854532
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||||||||||||||||||| ||| ||| | || ||||| || |  ||||||| |||||||||||||||||    
T  21854460 taagaacataatatgagtatgagagagaaagttgtacaaaagttgtaccaaaataattgtacaaatatcattt 21854532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 275 - 343
Target Start/End: Original strand, 36669370 - 36669438
Alignment:
Q  275 aacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||| || ||||||||| ||||||| | || |||||||||||||||| |  |||||||||||||||||    
T  36669370 aacatcatgtgagtatgagagaaaaagttgtacaaaaattatcacaaattgattgtacaaatatcattt 36669438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 271 - 343
Target Start/End: Complemental strand, 41885796 - 41885724
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||| ||||| ||||||||| ||  ||||| ||  ||||| |||||||||||| |||||||||||||||||    
T  41885796 taagaatataatgtgagtatgagagtgaaaattgtataaaaactatcacaaaataattgtacaaatatcattt 41885724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 271 - 343
Target Start/End: Complemental strand, 43105180 - 43105108
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||| ||||||||||||||| ||| ||||| ||  |||||||||   |||||| |||||||||||||||||    
T  43105180 taagaagataatatgagtatgagagagaaaattgtataaaaattatacaaaaataattgtacaaatatcattt 43105108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 307 - 343
Target Start/End: Complemental strand, 46281475 - 46281439
Alignment:
Q  307 caaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||||||| ||||||||||||||||||||||||||    
T  46281475 caaaaattattacaaaatagttgtacaaatatcattt 46281439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 275 - 347
Target Start/End: Complemental strand, 47113345 - 47113273
Alignment:
Q  275 aacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatttatct 347  Q
    |||||||| ||||||||| ||| ||| | || ||||||||||  ||||||  |||||||||||||||||||||    
T  47113345 aacataatgtgagtatgagagagaaagttgtccaaaaattattgcaaaatgattgtacaaatatcatttatct 47113273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 267 - 343
Target Start/End: Complemental strand, 49621442 - 49621366
Alignment:
Q  267 atagtaagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||||||| | ||| ||||||||| ||| ||| | ||  ||||||||| ||||||| ||||||||||||||||||    
T  49621442 atagtaagaatagaatgtgagtatgagagagaaagttgtctaaaaattattacaaaatggttgtacaaatatcattt 49621366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 586985 - 586902
Alignment:
Q  260 aagagatatagtaagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||| | |||||||| ||||| | ||||||| ||||||| | ||  ||||||||||||||| |  |||||||||||||||||    
T  586985 aagagagagagtaagaatataatgtaagtatgagagaaaaagttgtctaaaaattatcacaaagtgattgtacaaatatcattt 586902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 343
Target Start/End: Original strand, 7078509 - 7078568
Alignment:
Q  284 tgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||||||| ||| ||| | |||||||| || ||||||||||| ||||||||||||||||    
T  7078509 tgagtatgagagagaaagttgttcaaaagttgtcacaaaatagatgtacaaatatcattt 7078568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 276 - 343
Target Start/End: Original strand, 15182584 - 15182651
Alignment:
Q  276 acataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||||| |||||||||||||||| || ||  |||| || | | ||||||||||||||||||||||||    
T  15182584 acataatgtgagtatgaaagaaaatattgtcaaaaagttgttagaaaatagttgtacaaatatcattt 15182651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 30687138 - 30687055
Alignment:
Q  260 aagagatatagtaagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||| | |||||||| ||||| ||||||||| ||||||| | ||  |||| || |||| |||| ||||||||||||||||||    
T  30687138 aagagagagagtaagaatataatgtgagtatgatagaaaaagttgtctaaaagttgtcactaaatggttgtacaaatatcattt 30687055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 40238524 - 40238441
Alignment:
Q  260 aagagatatagtaagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||| | |||||||| ||||| ||| ||||| ||||||||| ||| |||| || ||| |||||  |||||||||||||||||    
T  40238524 aagagagaaagtaagaatataatgtgaatatgagagaaaaaattgtttaaaagttgtcaaaaaatgattgtacaaatatcattt 40238441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 288 - 347
Target Start/End: Original strand, 44161785 - 44161844
Alignment:
Q  288 tatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatttatct 347  Q
    ||||| ||| ||||| || ||||||||||  |||||||||| ||||||||||||||||||    
T  44161785 tatgagagagaaaattgtccaaaaattataccaaaatagttatacaaatatcatttatct 44161844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 302
Target Start/End: Complemental strand, 49201985 - 49201954
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaat 302  Q
    ||||||||||||||||||||||||||||||||    
T  49201985 taagaacataatatgagtatgaaagaaaaaat 49201954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 28907743 - 28907681
Alignment:
Q  163 gtagagtaatgatatttgtacaattatttgataacgagttttgtgacaatctttcttttctct 225  Q
    |||||||||||||| |||||||| |||||| |||| | |||||||| ||||||  ||||||||    
T  28907743 gtagagtaatgataattgtacaactatttgttaacaacttttgtgataatcttctttttctct 28907681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 308 - 346
Target Start/End: Complemental strand, 31974758 - 31974720
Alignment:
Q  308 aaaaattatcacaaaatagttgtacaaatatcatttatc 346  Q
    ||||||||||| |||||| ||||||||||||||||||||    
T  31974758 aaaaattatcaaaaaataattgtacaaatatcatttatc 31974720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 284 - 346
Target Start/End: Original strand, 34395928 - 34395990
Alignment:
Q  284 tgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatttatc 346  Q
    ||||||||| ||| ||| | |||||||| || ||| ||||||| |||||||||||||||||||    
T  34395928 tgagtatgagagagaaagttgttcaaaagttgtcataaaatagatgtacaaatatcatttatc 34395990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 165 - 250
Target Start/End: Original strand, 42829196 - 42829281
Alignment:
Q  165 agagtaatgatatttgtacaattatttgataacgagttttgtgacaatctttcttttctctttt-ttattgataaaaaacaatagag 250  Q
    |||||| ||||||||||||||  |||| ||||| | ||| ||||||| | ||||||||||| || |||||| |||||||||||||||    
T  42829196 agagtagtgatatttgtacaaccattt-ataacaattttggtgacaacccttcttttctctcttcttattggtaaaaaacaatagag 42829281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 269 - 343
Target Start/End: Original strand, 50528051 - 50528125
Alignment:
Q  269 agtaagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||||| ||||| ||||||||| ||||||||| ||  |||| || ||||||| |  |||||||||||||||||    
T  50528051 agtaagaatataatgtgagtatgagagaaaaaattgtctaaaagttgtcacaaattgattgtacaaatatcattt 50528125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 347
Target Start/End: Complemental strand, 835939 - 835870
Alignment:
Q  278 ataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatttatct 347  Q
    |||||||| |||||| ||| ||| | || |||||||| | |||||||  |||||||||||||||||||||    
T  835939 ataatatgtgtatgagagagaaagttgtacaaaaattgtaacaaaatgattgtacaaatatcatttatct 835870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 348
Target Start/End: Complemental strand, 26501370 - 26501293
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatttatcta 348  Q
    ||||||||| || | ||||||| ||| ||| | || ||||| |||| ||||||| |||||||||||||||||| ||||    
T  26501370 taagaacatcatgtaagtatgagagagaaagttgtccaaaagttattacaaaatggttgtacaaatatcatttctcta 26501293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 275 - 348
Target Start/End: Complemental strand, 27563555 - 27563482
Alignment:
Q  275 aacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatttatcta 348  Q
    |||||||| ||||||||| ||| ||||| ||  |||||||||  ||||||  ||||||||||||||||| ||||    
T  27563555 aacataatgtgagtatgagagagaaaattgtcaaaaaattatagcaaaatgattgtacaaatatcatttctcta 27563482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 348
Target Start/End: Complemental strand, 32873416 - 32873339
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatttatcta 348  Q
    |||||| ||||| ||||||||| | |||| || || ||||| |||||| ||||| | |||||||||||||||| ||||    
T  32873416 taagaagataatgtgagtatgagataaaagattgtacaaaagttatcataaaatggatgtacaaatatcatttctcta 32873339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 283 - 343
Target Start/End: Original strand, 33173698 - 33173759
Alignment:
Q  283 atgagtatgaaagaaaaaatcgtt-caaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||||||||| ||||||| ||  |||||||||| | |||||| |||||||||||||||||    
T  33173698 atgagtatgaaaaaaaaaattgtcacaaaaattataaaaaaataattgtacaaatatcattt 33173759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 348
Target Start/End: Complemental strand, 34157594 - 34157518
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatttatcta 348  Q
    |||||| ||||| ||||||||| ||| ||| | ||| ||||||||| | ||||| |||||||||||||||||| ||||    
T  34157594 taagaagataatgtgagtatgagagataaagttgttaaaaaattatta-aaaatggttgtacaaatatcatttctcta 34157518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 348
Target Start/End: Original strand, 34941912 - 34941993
Alignment:
Q  267 atagtaagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatttatcta 348  Q
    |||||||||| ||||| ||||||||| ||| ||| | ||  ||||||| |||||||||  | ||||||||||||||| ||||    
T  34941912 atagtaagaatataatgtgagtatgagagagaaagttgtctaaaaattgtcacaaaatgatagtacaaatatcatttctcta 34941993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 348
Target Start/End: Original strand, 51168660 - 51168841
Alignment:
Q  170 aatgatatttgtacaattatttgataacgagttttgtgacaatctttcttttctctttt-ttattgataaaaaacaat--agagnnnnnnngtaagagat 266  Q
    ||||||||||| ||||  ||||| |||| | |||| ||||||| ||| ||||||||||| |||||| | |||||||||  ||||         ||||||     
T  51168660 aatgatatttgaacaaccatttgctaacaacttttatgacaattttttttttctcttttcttattggttaaaaacaatggagagagaaaaaagaagagag 51168759  T
Q  267 atagtaagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatttatcta 348  Q
    | |||||||| ||||| ||| ||||| ||||||| | ||  |||| ||||||||||||  |||||||| |||||||| ||||    
T  51168760 agagtaagaatataatgtgaatatgagagaaaaagttgtctaaaagttatcacaaaatgattgtacaagtatcatttctcta 51168841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 164 - 247
Target Start/End: Complemental strand, 7423198 - 7423115
Alignment:
Q  164 tagagtaatgatatttgtacaattatttgataacgagttttgtgacaatctttcttttctctttt-ttattgataaaaaacaata 247  Q
    ||||||| |||||||| ||||| |||||  |||| | ||||||||||| ||| |||||||||||| |||||| | ||||||||||    
T  7423198 tagagtagtgatatttatacaactatttt-taacaacttttgtgacaaccttccttttctcttttcttattggtcaaaaacaata 7423115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 309 - 341
Target Start/End: Complemental strand, 14442297 - 14442265
Alignment:
Q  309 aaaattatcacaaaatagttgtacaaatatcat 341  Q
    |||||| ||||||||||||||||||||||||||    
T  14442297 aaaattgtcacaaaatagttgtacaaatatcat 14442265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 347
Target Start/End: Original strand, 18639736 - 18639776
Alignment:
Q  307 caaaaattatcacaaaatagttgtacaaatatcatttatct 347  Q
    ||||| |||||| ||||| ||||||||||||||||||||||    
T  18639736 caaaagttatcaaaaaatcgttgtacaaatatcatttatct 18639776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 260 - 348
Target Start/End: Original strand, 25988969 - 25989057
Alignment:
Q  260 aagagatatagtaagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatttatcta 348  Q
    |||||| | |||||||| ||||| ||||||||| ||| ||||| ||  |||| || | | ||||| |||||||||||||||||| ||||    
T  25988969 aagagagagagtaagaatataatgtgagtatgagagagaaaattgtctaaaagttgttaaaaaatggttgtacaaatatcatttctcta 25989057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 271 - 343
Target Start/End: Original strand, 29489355 - 29489427
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||| ||| || ||||||||| ||| ||| | || | ||| |||||||||||| ||||||||||||||||||    
T  29489355 taagaccatcatgtgagtatgagagagaaagttgtaccaaagttatcacaaaatggttgtacaaatatcattt 29489427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 343
Target Start/End: Complemental strand, 34157845 - 34157809
Alignment:
Q  307 caaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||||||||||||||||| || ||||||||||||||    
T  34157845 caaaaattatcacaaaataattatacaaatatcattt 34157809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 308 - 348
Target Start/End: Complemental strand, 39669844 - 39669804
Alignment:
Q  308 aaaaattatcacaaaatagttgtacaaatatcatttatcta 348  Q
    ||||||| ||||||||| |||||||||||||||||| ||||    
T  39669844 aaaaattgtcacaaaatggttgtacaaatatcatttctcta 39669804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 271 - 343
Target Start/End: Original strand, 40118711 - 40118783
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||| ||||| ||||||||| ||| ||||| || ||||||||||   |||||  |||||||||||||||||    
T  40118711 taagaagataatgtgagtatgagagagaaaattgtacaaaaattatacaaaaatgattgtacaaatatcattt 40118783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 271 - 343
Target Start/End: Complemental strand, 41608804 - 41608732
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||||||| |||||| ||| ||||| ||| |  | ||||||||||||||||||| | ||| |||||||||||    
T  41608804 taagaacatcatatgaatataaaagataaagttatccaaaaattatcacaaaataatagtataaatatcattt 41608732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 306 - 342
Target Start/End: Complemental strand, 41619096 - 41619060
Alignment:
Q  306 tcaaaaattatcacaaaatagttgtacaaatatcatt 342  Q
    |||||| |||||| |||||||||||||||||||||||    
T  41619096 tcaaaagttatcaaaaaatagttgtacaaatatcatt 41619060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 343
Target Start/End: Original strand, 45863753 - 45863789
Alignment:
Q  307 caaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||||||||| |||||| |||||||||||||||||    
T  45863753 caaaaattatcaaaaaataattgtacaaatatcattt 45863789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 260 - 348
Target Start/End: Original strand, 43079617 - 43079705
Alignment:
Q  260 aagagatatagtaagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatttatcta 348  Q
    |||||| | |||||||| ||||| ||||||||| ||| ||| | || |||||||||||||||| | |||||||||||||||||| ||||    
T  43079617 aagagagaaagtaagaatataatgtgagtatgagagagaaagttgtccaaaaattatcacaaagtggttgtacaaatatcatttctcta 43079705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 269 - 343
Target Start/End: Original strand, 24532936 - 24533011
Alignment:
Q  269 agtaagaacataatatgagtatgaaagaaaaaatcgtt-caaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||| |||||||| ||||||||| ||||||||| ||  |||||||||||| ||||||||||| ||||||||||||    
T  24532936 agtaaaaacataatgtgagtatgagagaaaaaattgtcacaaaaattatcagaaaatagttgttcaaatatcattt 24533011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 269 - 348
Target Start/End: Original strand, 34304672 - 34304751
Alignment:
Q  269 agtaagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatttatcta 348  Q
    |||||||| ||||| ||||||||| ||| ||||| ||  ||||||| ||| |||||||||||||||||||||||| ||||    
T  34304672 agtaagaatataatgtgagtatgagagagaaaattgtctaaaaattgtcaaaaaatagttgtacaaatatcatttttcta 34304751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 269 - 338
Target Start/End: Original strand, 4963770 - 4963839
Alignment:
Q  269 agtaagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatat 338  Q
    ||||||||||| || ||||| ||| ||||||||| |||||||||||||||||||||| | ||| ||||||    
T  4963770 agtaagaacatgatgtgagtttgagagaaaaaattgttcaaaaattatcacaaaataatcgtaaaaatat 4963839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 271 - 348
Target Start/End: Complemental strand, 13437273 - 13437196
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatttatcta 348  Q
    |||||||| ||| ||||||||| ||||||| | |||||||| || ||||||||| ||||| |||||||||||| ||||    
T  13437273 taagaacacaatgtgagtatgagagaaaaagttgttcaaaagttgtcacaaaatggttgtgcaaatatcatttctcta 13437196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 260 - 341
Target Start/End: Original strand, 18157170 - 18157251
Alignment:
Q  260 aagagatatagtaagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcat 341  Q
    |||||| | |||||||| ||||| ||||||||| ||| ||||| ||  ||||||||||||||| | ||||||||||||||||    
T  18157170 aagagagagagtaagaatataatgtgagtatgagagagaaaattgtctaaaaattatcacaaagtggttgtacaaatatcat 18157251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 170 - 250
Target Start/End: Complemental strand, 40270651 - 40270570
Alignment:
Q  170 aatgatatttgtacaattatttgataacgagttttgtgacaatctttcttttctctt-ttttattgataaaaaacaatagag 250  Q
    ||||||||||||||||||||||  | || | |||||||||| ||| | ||||||||| |||||||| |||||||||||||||    
T  40270651 aatgatatttgtacaattatttagtgacaacttttgtgacagtctattttttctctttttttattggtaaaaaacaatagag 40270570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 4971376 - 4971293
Alignment:
Q  260 aagagatatagtaagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||| |||||||||| ||||| ||||||||| ||| ||| | ||  |||| || ||||||||| ||||||||||||||||||    
T  4971376 aagagagatagtaagaatataatgtgagtatgagagagaaagttgtataaaagttgtcacaaaatggttgtacaaatatcattt 4971293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 284 - 343
Target Start/End: Original strand, 10014964 - 10015023
Alignment:
Q  284 tgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||||||| ||||||| | || |||| ||||||| ||||||||||||||||||||||||    
T  10014964 tgagtatgagagaaaaagttgtccaaatattatcataaaatagttgtacaaatatcattt 10015023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 11604696 - 11604753
Alignment:
Q  289 atgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatttatc 346  Q
    |||| ||| ||||| ||||||||||||||| |||||  ||||||||||||||||||||    
T  11604696 atgagagataaaattgttcaaaaattatcataaaatttttgtacaaatatcatttatc 11604753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 305 - 342
Target Start/End: Original strand, 34690954 - 34690991
Alignment:
Q  305 ttcaaaaattatcacaaaatagttgtacaaatatcatt 342  Q
    |||||||||||||| |||||||||||||||||||||||    
T  34690954 ttcaaaaattatcataaaatagttgtacaaatatcatt 34690991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 271 - 343
Target Start/End: Complemental strand, 16567391 - 16567319
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||| ||||| ||||||||||||| ||||| ||  |||| |||| | ||||| ||||||||||||||||||    
T  16567391 taagaatataatgtgagtatgaaagagaaaattgtcaaaaagttataataaaatggttgtacaaatatcattt 16567319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 271 - 343
Target Start/End: Original strand, 16598271 - 16598343
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||| ||||| ||||||||||||| ||||| ||  |||| |||| | ||||| ||||||||||||||||||    
T  16598271 taagaatataatgtgagtatgaaagagaaaattgtcaaaaagttataataaaatggttgtacaaatatcattt 16598343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 271 - 343
Target Start/End: Complemental strand, 17039232 - 17039160
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||| ||||| ||||||||| ||| ||| | || ||||||||||   ||||||||||||||||||||||||    
T  17039232 taagaagataatgtgagtatgagagagaaagttgtacaaaaattatacaaaaatagttgtacaaatatcattt 17039160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 271 - 343
Target Start/End: Complemental strand, 26153720 - 26153649
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||| ||||| ||||||||| ||| ||||| || ||||| || ||| ||||||||||||||||||||||||    
T  26153720 taagaatataatgtgagtatgagagagaaaattgt-caaaagttgtcataaaatagttgtacaaatatcattt 26153649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 275 - 343
Target Start/End: Complemental strand, 29763901 - 29763833
Alignment:
Q  275 aacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||| |||||||||||| | | ||| | || ||||| |||||||||||| ||||||||||||||||||    
T  29763901 aacatcatatgagtatgagaaagaaagttgtacaaaagttatcacaaaatggttgtacaaatatcattt 29763833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 275 - 343
Target Start/End: Original strand, 38096439 - 38096507
Alignment:
Q  275 aacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||||||||||||||||||| | | | ||  ||||||| ||||||||| ||||||||||||| ||||    
T  38096439 aacataatatgagtatgaaagagagagttgtcaaaaaattgtcacaaaatggttgtacaaatattattt 38096507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 275 - 343
Target Start/End: Complemental strand, 41966403 - 41966335
Alignment:
Q  275 aacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||||||||||||||||| | ||| | ||  ||||||| ||||||| | ||||||||||||||||||    
T  41966403 aacataatatgagtatgaaatagaaagttgtcaaaaaattgtcacaaagtggttgtacaaatatcattt 41966335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 271 - 343
Target Start/End: Complemental strand, 44511214 - 44511142
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||||||| || ||||||||||||| ||| | || ||||| || ||||||||| ||||||| ||||||||||    
T  44511214 taagaacatcatgtgagtatgaaagagaaagttgtacaaaagttgtcacaaaatggttgtacgaatatcattt 44511142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 271 - 343
Target Start/End: Original strand, 44564719 - 44564790
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||| ||||| ||||||||||| ||||| | ||  ||||||| ||| ||||||||||||||||||||||||    
T  44564719 taagaatataatgtgagtatgaaataaaaagttgtctaaaaattgtca-aaaatagttgtacaaatatcattt 44564790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 5868311 - 5868366
Alignment:
Q  284 tgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatc 339  Q
    ||||||| ||||||||| | |||||||| || | ||||||||||||||||||||||    
T  5868311 tgagtataaaagaaaaagttgttcaaaagttgttacaaaatagttgtacaaatatc 5868366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 343
Target Start/End: Original strand, 37325828 - 37325887
Alignment:
Q  284 tgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||||||||||| ||||| || ||||| || ||||||| | ||||||||||||||||||    
T  37325828 tgagtatgaaagagaaaattgtacaaaagttgtcacaaattggttgtacaaatatcattt 37325887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 347
Target Start/End: Original strand, 37385242 - 37385305
Alignment:
Q  284 tgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatttatct 347  Q
    ||||||||| ||| ||| | || ||||| || ||| ||||||||||||||||||||||||||||    
T  37385242 tgagtatgagagagaaagttgtacaaaagttgtcaaaaaatagttgtacaaatatcatttatct 37385305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 304 - 343
Target Start/End: Original strand, 40760797 - 40760836
Alignment:
Q  304 gttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  40760797 gttcaaaagttatcacaaaatagttgtataaatatcattt 40760836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 308 - 343
Target Start/End: Original strand, 49167888 - 49167923
Alignment:
Q  308 aaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||||||||||||||| |||||||||||||||||    
T  49167888 aaaaattatcacaaaataattgtacaaatatcattt 49167923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 308 - 342
Target Start/End: Original strand, 4560509 - 4560543
Alignment:
Q  308 aaaaattatcacaaaatagttgtacaaatatcatt 342  Q
    |||||||||||||||||||||| ||||||||||||    
T  4560509 aaaaattatcacaaaatagttgcacaaatatcatt 4560543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 305 - 343
Target Start/End: Original strand, 7458221 - 7458259
Alignment:
Q  305 ttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||||||| |||||||||| |||||||||||||||||    
T  7458221 ttcaaaaattgtcacaaaataattgtacaaatatcattt 7458259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 289 - 343
Target Start/End: Complemental strand, 12141956 - 12141902
Alignment:
Q  289 atgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||| ||||||| | |||||||| |||||||||||| ||||||||||||| ||||    
T  12141956 atgagagaaaaagttgttcaaaagttatcacaaaatggttgtacaaatatgattt 12141902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 281 - 343
Target Start/End: Complemental strand, 23329967 - 23329905
Alignment:
Q  281 atatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||||||||||||| ||||| ||  ||||||||| | ||||| ||||||||||| ||||||    
T  23329967 atatgagtatgaaagagaaaattgtcaaaaaattataataaaatggttgtacaaatgtcattt 23329905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 343
Target Start/End: Original strand, 25332501 - 25332567
Alignment:
Q  278 ataatatgagtatgaaagaaaaaatcgttcaaaaattatc-acaaaatagttgtacaaatatcattt 343  Q
    ||||||||||||||||||| ||||| ||  |||| ||||| | ||||| ||||||||||||||||||    
T  25332501 ataatatgagtatgaaagagaaaattgtctaaaagttatcaaaaaaatggttgtacaaatatcattt 25332567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 308 - 346
Target Start/End: Original strand, 27125585 - 27125623
Alignment:
Q  308 aaaaattatcacaaaatagttgtacaaatatcatttatc 346  Q
    ||||||||| |||||||||||||| ||||||||||||||    
T  27125585 aaaaattattacaaaatagttgtagaaatatcatttatc 27125623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 271 - 345
Target Start/End: Complemental strand, 31436494 - 31436420
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatttat 345  Q
    |||||| ||||| | ||||||| ||||||||| ||  |||| || ||| ||||| ||||||||||||||||||||    
T  31436494 taagaatataatgtaagtatgagagaaaaaattgtcaaaaagttgtcaaaaaatggttgtacaaatatcatttat 31436420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 261 - 318
Target Start/End: Original strand, 38939965 - 38940023
Alignment:
Q  261 agagatatagtaagaacataatatgagtatgaaagaaaaaatcgtt-caaaaattatca 318  Q
    ||||||| ||||| |||||||||||||||| | ||||||||| ||| ||||||||||||    
T  38939965 agagataaagtaaaaacataatatgagtataagagaaaaaattgttacaaaaattatca 38940023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 284 - 342
Target Start/End: Original strand, 43255576 - 43255634
Alignment:
Q  284 tgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatt 342  Q
    ||||||||| | | ||||| || |||||||| |||||||||| ||||||||||||||||    
T  43255576 tgagtatgagaaagaaaattgtacaaaaattgtcacaaaataattgtacaaatatcatt 43255634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 343
Target Start/End: Complemental strand, 7807123 - 7807058
Alignment:
Q  278 ataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||| ||||||||| ||||||| | ||  |||| |||||||||||| | ||||||||||||||||    
T  7807123 ataatgtgagtatgagagaaaaagttgtaaaaaatttatcacaaaatgggtgtacaaatatcattt 7807058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 348
Target Start/End: Complemental strand, 11070303 - 11070226
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatttatcta 348  Q
    |||||||||||| ||||||||| ||| ||| | || ||||| ||||   ||||| |||||||||||||||||| ||||    
T  11070303 taagaacataatgtgagtatgatagagaaagttgtacaaaagttatactaaaatggttgtacaaatatcatttctcta 11070226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 343
Target Start/End: Original strand, 28081785 - 28081850
Alignment:
Q  278 ataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||| ||||||||| ||| ||| | ||  ||||||||| ||||||| ||||||||||||||||||    
T  28081785 ataatgtgagtatgagagagaaagttgtaaaaaaattattacaaaatggttgtacaaatatcattt 28081850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 348
Target Start/End: Original strand, 31009636 - 31009713
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatttatcta 348  Q
    |||||| |||| |||||||||||||| ||||| ||| ||||||| ||| ||| ||  |||||| ||||||||| ||||    
T  31009636 taagaatataagatgagtatgaaagagaaaattgttaaaaaattgtcaaaaagtaaatgtacatatatcatttctcta 31009713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 249
Target Start/End: Complemental strand, 31467791 - 31467703
Alignment:
Q  162 agtagagtaatgatatttgtacaattatttgataacgagttttgtgacaatctttc-ttttctctttt-ttattgataaaaaacaataga 249  Q
    |||||| ||||||||||||||||||  |||||| || | |||||||| || ||||| ||||||||||| |||||| | ||||||||||||    
T  31467791 agtagattaatgatatttgtacaatcgtttgatgacaacttttgtgataa-ctttcattttctcttttcttattggttaaaaacaataga 31467703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 348
Target Start/End: Complemental strand, 35857572 - 35857495
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatttatcta 348  Q
    ||||| ||| || ||||||||| ||| ||| | || |||||||||||| ||| || ||||||||||||||||| ||||    
T  35857572 taagaccatcatgtgagtatgagagataaagttgtacaaaaattatcataaattaattgtacaaatatcatttttcta 35857495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 288 - 349
Target Start/End: Original strand, 49014412 - 49014473
Alignment:
Q  288 tatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatttatctac 349  Q
    ||||| ||| ||||| || ||||||||||||||||||| || ||| ||||| ||||||||||    
T  49014412 tatgagagagaaaattgtacaaaaattatcacaaaataattatactaatattatttatctac 49014473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 269 - 337
Target Start/End: Original strand, 677769 - 677837
Alignment:
Q  269 agtaagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaata 337  Q
    ||||| |||||||  ||| ||| | ||| ||||| |||||||| |||||| ||||||||||||||||||    
T  677769 agtaaaaacataacgtgaatataagagataaaattgttcaaaagttatcaaaaaatagttgtacaaata 677837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 344
Target Start/End: Complemental strand, 1790065 - 1789993
Alignment:
Q  272 aagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattta 344  Q
    |||||||| || ||||||||| ||| ||| | ||  |||| || || ||||||||||||||||||||||||||    
T  1790065 aagaacatcatgtgagtatgagagagaaagttgtcaaaaagttgtcgcaaaatagttgtacaaatatcattta 1789993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 343
Target Start/End: Complemental strand, 15564950 - 15564914
Alignment:
Q  307 caaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||||| || |||||||||||||||||||||||||    
T  15564950 caaaaattgtcgcaaaatagttgtacaaatatcattt 15564914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 348
Target Start/End: Complemental strand, 22692158 - 22692082
Alignment:
Q  272 aagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatttatcta 348  Q
    ||||| ||||| | ||||||| ||| ||||| ||| |||| || ||| ||||| |||||||||||||||||| ||||    
T  22692158 aagaatataatgtaagtatgagagagaaaattgtttaaaagttgtcataaaatggttgtacaaatatcatttctcta 22692082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 316 - 348
Target Start/End: Original strand, 23680068 - 23680100
Alignment:
Q  316 tcacaaaatagttgtacaaatatcatttatcta 348  Q
    |||||||||||||||||||||||||||| ||||    
T  23680068 tcacaaaatagttgtacaaatatcatttttcta 23680100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 275 - 343
Target Start/End: Original strand, 28548221 - 28548289
Alignment:
Q  275 aacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||||| ||||||||| ||| ||| | || ||||| || |  |||||||||||||||||||||||||    
T  28548221 aacataatgtgagtatgagagagaaagttgtacaaaagttgtaccaaaatagttgtacaaatatcattt 28548289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 163 - 246
Target Start/End: Original strand, 29162164 - 29162248
Alignment:
Q  163 gtagagtaatgatatttgtacaattatttgataacgagttttgtgacaatctttcttttctct-tttttattgataaaaaacaat 246  Q
    |||||| ||||||||||||||| | |||  || || | ||| |||||||||||  |||||||| ||||||||||| |||||||||    
T  29162164 gtagagcaatgatatttgtacattcattccatgacaactttagtgacaatcttgtttttctctctttttattgatcaaaaacaat 29162248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 271 - 343
Target Start/End: Original strand, 30864413 - 30864485
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||| ||| |||||||||||| ||| ||| | || ||||| || ||||||| | ||||||||||||||||||    
T  30864413 taagaccatcatatgagtatgagagagaaagttgtacaaaagttgtcacaaattggttgtacaaatatcattt 30864485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 271 - 343
Target Start/End: Complemental strand, 33050258 - 33050186
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||| ||| || ||||||||| ||| ||| | || ||||| || ||||||||| ||||||||||||||||||    
T  33050258 taagaccatcatgtgagtatgagagagaaagttgtacaaaagttgtcacaaaatggttgtacaaatatcattt 33050186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 275 - 343
Target Start/End: Original strand, 33341125 - 33341193
Alignment:
Q  275 aacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||| | ||||||||||||| ||||| || ||||| ||||   ||||| ||||||||||||||||||    
T  33341125 aacatagtgtgagtatgaaagagaaaattgtacaaaagttatactaaaattgttgtacaaatatcattt 33341193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 271 - 343
Target Start/End: Complemental strand, 37392118 - 37392046
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||| ||||| ||||||||| ||| ||| | ||| |||| || ||| ||||| ||||||||||||||||||    
T  37392118 taagaatataatgtgagtatgagagataaagttgtttaaaagttgtcaaaaaatggttgtacaaatatcattt 37392046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 275 - 343
Target Start/End: Complemental strand, 37970002 - 37969934
Alignment:
Q  275 aacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||||| ||||||||| ||| ||| | || ||||| || |  |||||||||||||||||||||||||    
T  37970002 aacataatgtgagtatgagagagaaagttgtacaaaagttgtatcaaaatagttgtacaaatatcattt 37969934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 284 - 348
Target Start/End: Complemental strand, 38990163 - 38990099
Alignment:
Q  284 tgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatttatcta 348  Q
    ||||||||||||||||| | || |||||||||| | |||||| || |||| ||||||||| ||||    
T  38990163 tgagtatgaaagaaaaagttgtccaaaaattatgaaaaaataattatacatatatcatttctcta 38990099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 260 - 348
Target Start/End: Complemental strand, 337204 - 337116
Alignment:
Q  260 aagagatatagtaagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcatttatcta 348  Q
    |||||| | |||||||| ||||| ||||||||| ||| ||| |  ||||||| || ||| ||||| |||||||||||||||||| ||||    
T  337204 aagagagagagtaagaatataatgtgagtatgagagagaaagttattcaaaagttgtcagaaaatggttgtacaaatatcatttctcta 337116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0522 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0522
Description:

Target: scaffold0522; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 343
Target Start/End: Original strand, 2513 - 2572
Alignment:
Q  284 tgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||||||| ||| ||| | || |||||||||||||| ||||| ||||||||||||||||    
T  2513 tgagtatgagagagaaagttgtccaaaaattatcacataatagatgtacaaatatcattt 2572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 308 - 343
Target Start/End: Complemental strand, 36040 - 36005
Alignment:
Q  308 aaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||||||||||||| ||||||||||||||||||||    
T  36040 aaaaattatcacaaagtagttgtacaaatatcattt 36005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 308 - 342
Target Start/End: Original strand, 89469 - 89503
Alignment:
Q  308 aaaaattatcacaaaatagttgtacaaatatcatt 342  Q
    ||||||||||||||||||||||||||| |||||||    
T  89469 aaaaattatcacaaaatagttgtacaagtatcatt 89503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 337
Target Start/End: Original strand, 17315 - 17392
Alignment:
Q  260 aagagatatagtaagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaata 337  Q
    |||||| | ||||||||  |||| | ||||||| |||||||||  || |||| |||| ||||||||||||||||||||    
T  17315 aagagaaagagtaagaatgtaatgtaagtatgagagaaaaaattatttaaaagttattacaaaatagttgtacaaata 17392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 166 - 250
Target Start/End: Complemental strand, 32158 - 32077
Alignment:
Q  166 gagtaatgatatttgtacaattatttgataacgagttttgtgacaatctttcttttctcttttttattgataaaaaacaatagag 250  Q
    ||||| ||||||||||||||||||||| | || | |||||| |||| |||  |||||||  |||||||||| |||||||||||||    
T  32158 gagtagtgatatttgtacaattatttg-tgacaatttttgtaacaaccttatttttctc--ttttattgatcaaaaacaatagag 32077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 286 - 343
Target Start/End: Complemental strand, 395921 - 395864
Alignment:
Q  286 agtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||||||||  |||| ||  |||||||||||||||| ||||||| |||||||||||    
T  395921 agtatgaaagatgaaattgtcaaaaaattatcacaaaagagttgtagaaatatcattt 395864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0662 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0662
Description:

Target: scaffold0662; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 316 - 348
Target Start/End: Complemental strand, 1108 - 1076
Alignment:
Q  316 tcacaaaatagttgtacaaatatcatttatcta 348  Q
    |||||||||||||||||||||||||||| ||||    
T  1108 tcacaaaatagttgtacaaatatcatttctcta 1076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0592 (Bit Score: 29; Significance: 0.0000006; HSPs: 2)
Name: scaffold0592
Description:

Target: scaffold0592; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 275 - 343
Target Start/End: Complemental strand, 981 - 913
Alignment:
Q  275 aacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||||| ||||||||| ||| |||||  | ||||||||||  |||| | ||||||||||||||||||    
T  981 aacataatgtgagtatgagagagaaaattatacaaaaattatatcaaattggttgtacaaatatcattt 913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0592; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 271 - 343
Target Start/End: Original strand, 8303 - 8375
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    |||||| ||||||||||||||| ||||| | | ||| | || || ||||||||| ||||||||||||| ||||    
T  8303 taagaatataatatgagtatgagagaaacagttgttaagaagttgtcacaaaatggttgtacaaatataattt 8375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 320 - 348
Target Start/End: Complemental strand, 34434 - 34406
Alignment:
Q  320 aaaatagttgtacaaatatcatttatcta 348  Q
    |||||||||||||||||||||||||||||    
T  34434 aaaatagttgtacaaatatcatttatcta 34406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 271 - 343
Target Start/End: Complemental strand, 18670 - 18598
Alignment:
Q  271 taagaacataatatgagtatgaaagaaaaaatcgttcaaaaattatcacaaaatagttgtacaaatatcattt 343  Q
    ||||| ||| || ||||||||| ||| ||| | || ||||| |||||||||| | ||||||||||||||||||    
T  18670 taagaccatcatgtgagtatgagagagaaagttgtacaaaagttatcacaaattggttgtacaaatatcattt 18598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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