View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14409_high_23 (Length: 239)
Name: NF14409_high_23
Description: NF14409
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14409_high_23 |
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Alignment Details
Target: chr2 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 18 - 233
Target Start/End: Complemental strand, 44566115 - 44565900
Alignment:
| Q |
18 |
aaattgagatgtcaaacatattacttttattacagacactaaagtgatcaaatcatggtgaaaggaaaattgtataggcccgcaatattcgtccggttga |
117 |
Q |
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| T |
44566115 |
aaattgagatgtcaaacatattacttttattacagacactaaagtgatcatatcatggtgaaaggaaaattgtataggcccgcaatattcgtccggttga |
44566016 |
T |
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| Q |
118 |
taccatcatgtcacaatgcacgtgagaaattgccaggtcaaccccaaaaatacttaaaggcactatgtaaaactatttttccatgttgtatttactaaca |
217 |
Q |
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||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44566015 |
taccatcatatcacaatgcacgtgagaaattgccaggtcaaccccaaaaatacttaaaggcactatgtaaaactatttttccatgttgtatttactaaca |
44565916 |
T |
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| Q |
218 |
ttattcttcttttcag |
233 |
Q |
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|||||||||||||||| |
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| T |
44565915 |
ttattcttcttttcag |
44565900 |
T |
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