View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14411_high_30 (Length: 280)
Name: NF14411_high_30
Description: NF14411
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14411_high_30 |
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Alignment Details
Target: chr4 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 270
Target Start/End: Original strand, 53184706 - 53184962
Alignment:
| Q |
1 |
tttattaaaatgtgtctaagaagattggaaataagtgtaccactgtgtttggtatgaaccttcgttggagggggttctgaagggtccatcatattcatag |
100 |
Q |
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| T |
53184706 |
tttattaaaatgtgtctaagaagattggaaataagtgtaccactgtgtttggtatgaaccttcgttggagggggttctgaagggtccatcatattcatag |
53184805 |
T |
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| Q |
101 |
accatagtgattatttaattcagtgattgatacaaatatctatatctgtgtgaaggatatcgttaatagtaacggagtccgagtaagggtggatttggtg |
200 |
Q |
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| T |
53184806 |
-------tgattatttaattcagtgattgatacaaatat------ctgtgtgaaggatatggttaatagtaacggagtccgagtaagggtggatttggtg |
53184892 |
T |
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| Q |
201 |
gagagatttagttgtataggaggagtataagatattgaattctaacatttctttttctttgtagtataat |
270 |
Q |
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||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
53184893 |
gagaggtttagttgtataggaggagtataagatattgaattctaacatttctttttctttgtagtataat |
53184962 |
T |
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