View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14411_high_33 (Length: 274)
Name: NF14411_high_33
Description: NF14411
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14411_high_33 |
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Alignment Details
Target: chr5 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 11 - 258
Target Start/End: Original strand, 33806640 - 33806887
Alignment:
| Q |
11 |
gaagaagatacactgaaagaagactggacagattcatttgcaaacacctttggcttgaaatgtgtacctgtgtaacctgttcaaccctattaagaactaa |
110 |
Q |
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| T |
33806640 |
gaagaagatacactgaaagaagactggacagattcatttgcaaacacctttggcttgaaatgtgtacctgtgtaacctgttcaaccctattaagaactaa |
33806739 |
T |
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| Q |
111 |
ctcagactatcacccatttttgcttgattttgaagccactcaaaacaagtttgttacctagtttaaatttcaataaatgtggaccctgcatacagactat |
210 |
Q |
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| T |
33806740 |
cttagaccatcacccaattttccttgattttgaagccactcaaaacaagtttgttacctagtttaaatttcaataaatgtggaccctacatacagactat |
33806839 |
T |
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| Q |
211 |
agaaacattgtaacctcaacctggaattttaatgtagttggttgtccc |
258 |
Q |
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| T |
33806840 |
agaaacattgtaacctcaacctagaattttaatgtagttggttgtccc |
33806887 |
T |
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