View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14411_low_16 (Length: 419)
Name: NF14411_low_16
Description: NF14411
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14411_low_16 |
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Alignment Details
Target: chr4 (Bit Score: 310; Significance: 1e-174; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 310; E-Value: 1e-174
Query Start/End: Original strand, 13 - 385
Target Start/End: Original strand, 51902799 - 51903172
Alignment:
| Q |
13 |
tgagatgaaaaattgaataagagatgaatgattaaatgattatttaattacttgtatgatgttttgctgacacattttttcgacatcaacagcatatgta |
112 |
Q |
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| T |
51902799 |
tgagatgaaaaattgaataagagatgaatgattaaataattgtttggttaattatatgatgttttgttgacacattttttcgacatcaacagcgtatgta |
51902898 |
T |
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| Q |
113 |
tctattgatattgaaaa-aatgagaataacataattcaatgtttcaagaatatgaaaaaattgtagaaaacagttatgatgtttttctatgcattcaaaa |
211 |
Q |
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| T |
51902899 |
tctattgatgttgaaaaaaatgagaataacataattcaatgtttcaagaatatgaaaaaattgtagaaaacagttatgatgtttttctatgcattcaaaa |
51902998 |
T |
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| Q |
212 |
atgaaatgttatatccatctatataatattacaaatttatatattcgtgtctgcacatatcttacttgtaaaatgagagttccagtcggaacataaaggt |
311 |
Q |
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| T |
51902999 |
atgaaatgttatatccatctatataatgttacaaatttatatattcgtgtctgcacatatcttacttgtaaaatgacagttccagtcggaacataaagtt |
51903098 |
T |
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| Q |
312 |
cagtttccttttgacatgaaacaccttgatccctggctcctccttaaaatatttaggtggagattgagtgataa |
385 |
Q |
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| T |
51903099 |
cagtttccttttgacatgaaacaccttgattcctggctcctccttaaaatatctaggtggagattgagtgataa |
51903172 |
T |
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