View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14411_low_5 (Length: 569)
Name: NF14411_low_5
Description: NF14411
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14411_low_5 |
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Alignment Details
Target: chr7 (Bit Score: 516; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 516; E-Value: 0
Query Start/End: Original strand, 20 - 555
Target Start/End: Original strand, 38909558 - 38910093
Alignment:
| Q |
20 |
ctaaaccaatattagcacttttaagattatggagacattcaaagcacgtggtcctaaaagatggaaataacaaatgatcatttatatattgaataaaagt |
119 |
Q |
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| T |
38909558 |
ctaaaccaatattagcacttttaatattatggagacattcaaagcacgtggtcctaaaagatggaaataacaaatgatcatttatatattgaataaaagt |
38909657 |
T |
|
| Q |
120 |
aatgatttatatagtattattcctcttcgaaatttgaatgatgaccagtttcttttttgaggtgccaagtagtcattagctttagttgttgaaactataa |
219 |
Q |
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| T |
38909658 |
aatgatttatatagtattattcctcttcgaaatttgactgatgaccagtttcttttttgaggtgccaagtagtcattagctttagttgttgaaactataa |
38909757 |
T |
|
| Q |
220 |
attaatttgcaactttaaacaatcaatcatcaaagattagcttttgttgaaaataagaggcaaatttgcactgatttaaaacagggaaaagattttacta |
319 |
Q |
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| T |
38909758 |
attaatttgcaactttaaacaatcaatcatcaaagattagcttttgttgaaaataagaggcaaatttgcactgatttaaaacagggaaaagattttacta |
38909857 |
T |
|
| Q |
320 |
tggcattacattcaattaccagtcaaacaagtacatttaactaggagaaaggttttttcttcatcatacacaataatttctgaacagacaaaaattggaa |
419 |
Q |
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| T |
38909858 |
tggcattacattcaattaccagtcaaacaagtacatttaactaggagaaaggttttttcttcatcatacacagtaatttctgaacagacaaaaattggaa |
38909957 |
T |
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| Q |
420 |
gtattaaatcattattttgttgcttagaagtcaagttaggaggagcacactatcaataatcaacagtcaaaagtcagctttaaaatttcgataatttatt |
519 |
Q |
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| T |
38909958 |
gtattaaatcattatttcgttgcttagaagtcaagttaggaggagcacactatcaataatcaacagtcaaaagtcagctttaaaatttcgataatttatt |
38910057 |
T |
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| Q |
520 |
tgagacagtttttcctcctcccccacgtagaataat |
555 |
Q |
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| T |
38910058 |
tgagacagtttttcctcctcccccacgtagagtaat |
38910093 |
T |
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