View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14412_high_1 (Length: 490)
Name: NF14412_high_1
Description: NF14412
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14412_high_1 |
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Alignment Details
Target: chr8 (Bit Score: 453; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 453; E-Value: 0
Query Start/End: Original strand, 13 - 477
Target Start/End: Original strand, 10066539 - 10067003
Alignment:
| Q |
13 |
gatgaatatggcaaagattatctccccaatataagtgcttgtcttcaggttctgcccaacagaactgcaaataacaacaaaatttgacttttaaatagat |
112 |
Q |
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| T |
10066539 |
gatgaatatggcaaagattatctccccaatataagtgcttgtcttcaggttctgcccaacagaactgcaaataacaacaaaatttgacttttaaatagat |
10066638 |
T |
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| Q |
113 |
tgaactaagttttccttgataagatggcacaaaatattaaatagtggttagtccatcgaaacattgcgaataaagttaaggctgcatttggaagagctta |
212 |
Q |
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| T |
10066639 |
tgaactaagttttccttgataagatgtcacaaaatattaaatagtggttagtccatcgaaacattgcgaataaagttaaggctgcatttggaagagctta |
10066738 |
T |
|
| Q |
213 |
tgacttaaaacttatacaaatgtttggaggaacttacgaaaatagcttctaatttgtcctaaggttgttttaagcttatcttcataagcttttaagaagc |
312 |
Q |
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| T |
10066739 |
tgacttaaaacttatacaaatgattggaggaacttacgaaaatagcttctaatttgtcctaaggttgttttaagcttatcttcataagcttttaagaagc |
10066838 |
T |
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| Q |
313 |
ttacaaaatcaacatatgcaatgcgtcaactattcattctttattgtagaaatatattatacataaactctattaatattgataagcacttattaactaa |
412 |
Q |
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| T |
10066839 |
ttacaaaatcaacatatgcaatgcgtcaactattcattctttattgtagaaatatattatacataaactctattaatattgataagcacttattaactaa |
10066938 |
T |
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| Q |
413 |
atgcataattaagttgtttactctataagaacacaaggacatagaagttcctaagcagagaagat |
477 |
Q |
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| T |
10066939 |
atgcataattaagttgtttactctataagaacacaaggatatagaagttcctaagcagagaagat |
10067003 |
T |
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