View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14414_high_21 (Length: 247)
Name: NF14414_high_21
Description: NF14414
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14414_high_21 |
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Alignment Details
Target: chr6 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 5 - 232
Target Start/End: Complemental strand, 28699000 - 28698769
Alignment:
| Q |
5 |
aaacaaacacaaacttgccaacaaatgtggaggcaattcaacagcaggaacaaatttcggatcattcacg----catcggcgaacttcagcaagaaaatt |
100 |
Q |
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| T |
28699000 |
aaacaaacacaaacttgccaacaaatgtggaggcaattcaacagcaggaacaaatttcggatcattcacgtacgcatcggcgaacatcagcaagaaaatt |
28698901 |
T |
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| Q |
101 |
atcattcatagtctccgataacgtcttctgcaaatccatagagaatagtattaaagaaatacaatatggagaaataaaatacagagaaataaactaaagt |
200 |
Q |
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| T |
28698900 |
atcattcatagtctccgataacgtcttctgcaaatccatagagaatagtattaaagaaatacaatatggagaaataaaatacagagaaataaactaaagt |
28698801 |
T |
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| Q |
201 |
tgtttgtaaaaaagcattgctaaagacccaat |
232 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
28698800 |
tgtttgtaaaaaagcattgctaaagacccaat |
28698769 |
T |
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