View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14415_low_13 (Length: 313)

Name: NF14415_low_13
Description: NF14415
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14415_low_13
NF14415_low_13
[»] chr3 (23 HSPs)
chr3 (17-297)||(44359233-44359525)
chr3 (197-225)||(2666007-2666035)
chr3 (197-225)||(5560179-5560207)
chr3 (197-225)||(7755453-7755481)
chr3 (197-225)||(22399104-22399132)
chr3 (197-225)||(24100290-24100318)
chr3 (197-225)||(27067125-27067153)
chr3 (197-225)||(29625974-29626002)
chr3 (197-225)||(32234544-32234572)
chr3 (197-225)||(37313406-37313434)
chr3 (197-225)||(39053401-39053429)
chr3 (197-225)||(40131106-40131134)
chr3 (197-225)||(40804657-40804685)
chr3 (197-225)||(41293465-41293493)
chr3 (197-225)||(41464359-41464387)
chr3 (197-225)||(42291849-42291877)
chr3 (197-225)||(43125838-43125866)
chr3 (197-225)||(44806691-44806719)
chr3 (197-225)||(47257800-47257828)
chr3 (197-225)||(49330044-49330072)
chr3 (197-225)||(51102525-51102553)
chr3 (197-225)||(51452897-51452925)
chr3 (197-225)||(52628961-52628989)
[»] chr8 (18 HSPs)
chr8 (196-225)||(40435299-40435328)
chr8 (197-225)||(2275920-2275948)
chr8 (197-225)||(2714556-2714584)
chr8 (197-225)||(5946054-5946082)
chr8 (197-225)||(6365993-6366021)
chr8 (197-225)||(12032959-12032987)
chr8 (197-225)||(17718869-17718897)
chr8 (197-225)||(22878398-22878426)
chr8 (197-225)||(31831102-31831130)
chr8 (197-225)||(32114256-32114284)
chr8 (197-225)||(32984224-32984252)
chr8 (197-225)||(37301472-37301500)
chr8 (197-225)||(37419947-37419975)
chr8 (197-225)||(37956428-37956456)
chr8 (197-225)||(41653902-41653930)
chr8 (197-225)||(41862227-41862255)
chr8 (197-225)||(43328714-43328742)
chr8 (197-225)||(45236712-45236740)
[»] chr4 (29 HSPs)
chr4 (196-225)||(41702605-41702634)
chr4 (197-225)||(146576-146604)
chr4 (197-225)||(2243465-2243493)
chr4 (197-225)||(6019935-6019963)
chr4 (197-225)||(14017521-14017549)
chr4 (197-225)||(17555633-17555661)
chr4 (197-225)||(18462160-18462188)
chr4 (197-225)||(21366756-21366784)
chr4 (197-225)||(22468917-22468945)
chr4 (197-225)||(22618659-22618687)
chr4 (197-225)||(23437599-23437627)
chr4 (197-225)||(29478367-29478395)
chr4 (197-225)||(29777404-29777432)
chr4 (197-225)||(31070220-31070248)
chr4 (197-225)||(39077552-39077580)
chr4 (197-225)||(41632153-41632181)
chr4 (197-225)||(41949389-41949417)
chr4 (197-225)||(42222298-42222326)
chr4 (197-225)||(42557589-42557617)
chr4 (197-225)||(43471842-43471870)
chr4 (197-225)||(47344663-47344691)
chr4 (197-225)||(48313564-48313592)
chr4 (197-225)||(49881210-49881238)
chr4 (197-225)||(50457957-50457985)
chr4 (196-224)||(50534639-50534667)
chr4 (197-225)||(51363014-51363042)
chr4 (197-225)||(53854576-53854604)
chr4 (197-225)||(54805765-54805793)
chr4 (197-225)||(55056406-55056434)
[»] scaffold0394 (1 HSPs)
scaffold0394 (197-225)||(3095-3123)
[»] scaffold0155 (1 HSPs)
scaffold0155 (197-225)||(2579-2607)
[»] scaffold0100 (1 HSPs)
scaffold0100 (197-225)||(32568-32596)
[»] scaffold0092 (1 HSPs)
scaffold0092 (197-225)||(39703-39731)
[»] scaffold0035 (1 HSPs)
scaffold0035 (197-225)||(75391-75419)
[»] chr7 (12 HSPs)
chr7 (197-225)||(10028496-10028524)
chr7 (197-225)||(15877558-15877586)
chr7 (197-225)||(20165961-20165989)
chr7 (197-225)||(22979794-22979822)
chr7 (197-225)||(33332797-33332825)
chr7 (197-225)||(33839862-33839890)
chr7 (197-225)||(45063502-45063530)
chr7 (197-225)||(45482666-45482694)
chr7 (197-225)||(46913117-46913145)
chr7 (197-225)||(47740478-47740506)
chr7 (197-225)||(48609824-48609852)
chr7 (197-225)||(49171509-49171537)
[»] chr6 (14 HSPs)
chr6 (197-225)||(599899-599927)
chr6 (197-225)||(960051-960079)
chr6 (197-225)||(1970718-1970746)
chr6 (197-225)||(2892195-2892223)
chr6 (197-225)||(5882513-5882541)
chr6 (197-225)||(8615247-8615275)
chr6 (197-225)||(16703373-16703401)
chr6 (197-225)||(18101642-18101670)
chr6 (197-225)||(19281202-19281230)
chr6 (197-225)||(19415680-19415708)
chr6 (197-225)||(22551208-22551236)
chr6 (197-225)||(28947094-28947122)
chr6 (197-225)||(30467750-30467778)
chr6 (197-225)||(30743595-30743623)
[»] chr5 (9 HSPs)
chr5 (197-225)||(3466828-3466856)
chr5 (197-225)||(5137722-5137750)
chr5 (197-225)||(5184979-5185007)
chr5 (197-225)||(15398629-15398657)
chr5 (197-225)||(18479815-18479843)
chr5 (197-225)||(24253389-24253417)
chr5 (197-225)||(25831528-25831556)
chr5 (197-225)||(40886174-40886202)
chr5 (197-225)||(43326526-43326554)
[»] chr2 (18 HSPs)
chr2 (197-225)||(746472-746500)
chr2 (197-225)||(2325036-2325064)
chr2 (197-225)||(4034598-4034626)
chr2 (197-225)||(6594605-6594633)
chr2 (197-225)||(7892835-7892863)
chr2 (197-225)||(10424601-10424629)
chr2 (197-225)||(12814620-12814648)
chr2 (197-225)||(13815365-13815393)
chr2 (197-225)||(23901785-23901813)
chr2 (197-225)||(26710351-26710379)
chr2 (197-225)||(27024421-27024449)
chr2 (197-225)||(27400409-27400437)
chr2 (197-225)||(27651181-27651209)
chr2 (197-225)||(28019968-28019996)
chr2 (197-225)||(32327367-32327395)
chr2 (197-225)||(32608386-32608414)
chr2 (197-225)||(38997107-38997135)
chr2 (197-225)||(40735470-40735498)
[»] chr1 (26 HSPs)
chr1 (197-225)||(4156212-4156240)
chr1 (197-225)||(5980075-5980103)
chr1 (197-225)||(5981177-5981205)
chr1 (197-225)||(6327694-6327722)
chr1 (197-225)||(17995098-17995126)
chr1 (197-225)||(23221076-23221104)
chr1 (197-225)||(23984762-23984790)
chr1 (197-225)||(24245172-24245200)
chr1 (197-225)||(24885508-24885536)
chr1 (197-225)||(25058695-25058723)
chr1 (197-225)||(26277184-26277212)
chr1 (197-225)||(26525036-26525064)
chr1 (197-225)||(27983734-27983762)
chr1 (197-225)||(31040716-31040744)
chr1 (197-225)||(31308008-31308036)
chr1 (197-225)||(31980082-31980110)
chr1 (197-225)||(33112964-33112992)
chr1 (197-225)||(35692811-35692839)
chr1 (197-225)||(38332006-38332034)
chr1 (197-225)||(44661977-44662005)
chr1 (197-225)||(45538160-45538188)
chr1 (197-225)||(46616556-46616584)
chr1 (197-225)||(46967188-46967216)
chr1 (197-225)||(48373511-48373539)
chr1 (197-225)||(49254122-49254150)
chr1 (197-225)||(51403154-51403182)


Alignment Details
Target: chr3 (Bit Score: 207; Significance: 1e-113; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 17 - 297
Target Start/End: Complemental strand, 44359525 - 44359233
Alignment:
Q  17 agaaagttctattaaaagaatataatctaacttgtgtgtcacatgtttctcgacaaaaatcagtcaatattgtaatgtgcaaaaaacaattttacacatc 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  44359525 agaaagttctattaaaagaatataatctaacttgtgtgtcacatgtttctcaacaaaaatccgtcaatattgtaatgtgcaaaaaacaattttacacatc 44359426  T
Q  117 ttagatcacaattttttcatgtcaagaacacctaagttacccttgaaaaaatggtgagtattttactcaagcaatgaacgttacccaccattcttcaaag 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  44359425 ttagatcacaattttttcatgtcaagaacacctaagttacccttgaaaaaatggtgagtattttactcaaccaatgaacgttacccaccattcttcaaag 44359326  T
Q  217 gtaatctagnnnnnnncaatatgtgaagtatt------------aatagtaatacactgatacaacatacataccacaaaacaagcacagtat 297  Q
     |||| |||       ||||| ||||||||||            |||||||||||||||||||||||||||||||||||||||||||||||||    
T  44359325 ataatatagaaaaaaacaatacgtgaagtattaattatggtataaatagtaatacactgatacaacatacataccacaaaacaagcacagtat 44359233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 2666035 - 2666007
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  2666035 ttacccaccattcttcaaaggtaatctag 2666007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 5560179 - 5560207
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  5560179 ttacccaccattcttcaaaggtaatctag 5560207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 7755453 - 7755481
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  7755453 ttacccaccattcttcaaaggtaatctag 7755481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 22399132 - 22399104
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  22399132 ttacccaccattcttcaaaggtaatctag 22399104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 24100318 - 24100290
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  24100318 ttacccaccattcttcaaaggtaatctag 24100290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 27067125 - 27067153
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  27067125 ttacccaccattcttcaaaggtaatctag 27067153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 29625974 - 29626002
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  29625974 ttacccaccattcttcaaaggtaatctag 29626002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 32234544 - 32234572
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  32234544 ttacccaccattcttcaaaggtaatctag 32234572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 37313434 - 37313406
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  37313434 ttacccaccattcttcaaaggtaatctag 37313406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 39053429 - 39053401
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  39053429 ttacccaccattcttcaaaggtaatctag 39053401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 40131106 - 40131134
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  40131106 ttacccaccattcttcaaaggtaatctag 40131134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 40804657 - 40804685
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  40804657 ttacccaccattcttcaaaggtaatctag 40804685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 41293465 - 41293493
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  41293465 ttacccaccattcttcaaaggtaatctag 41293493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 41464387 - 41464359
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  41464387 ttacccaccattcttcaaaggtaatctag 41464359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 42291877 - 42291849
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  42291877 ttacccaccattcttcaaaggtaatctag 42291849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 43125866 - 43125838
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  43125866 ttacccaccattcttcaaaggtaatctag 43125838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 44806719 - 44806691
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  44806719 ttacccaccattcttcaaaggtaatctag 44806691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 47257828 - 47257800
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  47257828 ttacccaccattcttcaaaggtaatctag 47257800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 49330072 - 49330044
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  49330072 ttacccaccattcttcaaaggtaatctag 49330044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 51102525 - 51102553
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  51102525 ttacccaccattcttcaaaggtaatctag 51102553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 51452897 - 51452925
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  51452897 ttacccaccattcttcaaaggtaatctag 51452925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 52628989 - 52628961
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  52628989 ttacccaccattcttcaaaggtaatctag 52628961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 30; Significance: 0.0000001; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 225
Target Start/End: Original strand, 40435299 - 40435328
Alignment:
Q  196 gttacccaccattcttcaaaggtaatctag 225  Q
    ||||||||||||||||||||||||||||||    
T  40435299 gttacccaccattcttcaaaggtaatctag 40435328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 2275948 - 2275920
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  2275948 ttacccaccattcttcaaaggtaatctag 2275920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 2714584 - 2714556
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  2714584 ttacccaccattcttcaaaggtaatctag 2714556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 5946082 - 5946054
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  5946082 ttacccaccattcttcaaaggtaatctag 5946054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 6366021 - 6365993
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  6366021 ttacccaccattcttcaaaggtaatctag 6365993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 12032987 - 12032959
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  12032987 ttacccaccattcttcaaaggtaatctag 12032959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 17718869 - 17718897
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  17718869 ttacccaccattcttcaaaggtaatctag 17718897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 22878426 - 22878398
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  22878426 ttacccaccattcttcaaaggtaatctag 22878398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 31831102 - 31831130
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  31831102 ttacccaccattcttcaaaggtaatctag 31831130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 32114284 - 32114256
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  32114284 ttacccaccattcttcaaaggtaatctag 32114256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 32984224 - 32984252
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  32984224 ttacccaccattcttcaaaggtaatctag 32984252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 37301472 - 37301500
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  37301472 ttacccaccattcttcaaaggtaatctag 37301500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 37419975 - 37419947
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  37419975 ttacccaccattcttcaaaggtaatctag 37419947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 37956456 - 37956428
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  37956456 ttacccaccattcttcaaaggtaatctag 37956428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 41653930 - 41653902
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  41653930 ttacccaccattcttcaaaggtaatctag 41653902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 41862255 - 41862227
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  41862255 ttacccaccattcttcaaaggtaatctag 41862227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 43328742 - 43328714
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  43328742 ttacccaccattcttcaaaggtaatctag 43328714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 45236712 - 45236740
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  45236712 ttacccaccattcttcaaaggtaatctag 45236740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 30; Significance: 0.0000001; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 225
Target Start/End: Original strand, 41702605 - 41702634
Alignment:
Q  196 gttacccaccattcttcaaaggtaatctag 225  Q
    ||||||||||||||||||||||||||||||    
T  41702605 gttacccaccattcttcaaaggtaatctag 41702634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 146576 - 146604
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  146576 ttacccaccattcttcaaaggtaatctag 146604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 2243493 - 2243465
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  2243493 ttacccaccattcttcaaaggtaatctag 2243465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 6019963 - 6019935
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  6019963 ttacccaccattcttcaaaggtaatctag 6019935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 14017521 - 14017549
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  14017521 ttacccaccattcttcaaaggtaatctag 14017549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 17555633 - 17555661
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  17555633 ttacccaccattcttcaaaggtaatctag 17555661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 18462160 - 18462188
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  18462160 ttacccaccattcttcaaaggtaatctag 18462188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 21366756 - 21366784
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  21366756 ttacccaccattcttcaaaggtaatctag 21366784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 22468917 - 22468945
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  22468917 ttacccaccattcttcaaaggtaatctag 22468945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 22618659 - 22618687
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  22618659 ttacccaccattcttcaaaggtaatctag 22618687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 23437627 - 23437599
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  23437627 ttacccaccattcttcaaaggtaatctag 23437599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 29478395 - 29478367
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  29478395 ttacccaccattcttcaaaggtaatctag 29478367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 29777404 - 29777432
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  29777404 ttacccaccattcttcaaaggtaatctag 29777432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 31070220 - 31070248
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  31070220 ttacccaccattcttcaaaggtaatctag 31070248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 39077580 - 39077552
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  39077580 ttacccaccattcttcaaaggtaatctag 39077552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 41632153 - 41632181
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  41632153 ttacccaccattcttcaaaggtaatctag 41632181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 41949417 - 41949389
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  41949417 ttacccaccattcttcaaaggtaatctag 41949389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 42222326 - 42222298
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  42222326 ttacccaccattcttcaaaggtaatctag 42222298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 42557617 - 42557589
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  42557617 ttacccaccattcttcaaaggtaatctag 42557589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 43471842 - 43471870
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  43471842 ttacccaccattcttcaaaggtaatctag 43471870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 47344691 - 47344663
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  47344691 ttacccaccattcttcaaaggtaatctag 47344663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 48313592 - 48313564
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  48313592 ttacccaccattcttcaaaggtaatctag 48313564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 49881210 - 49881238
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  49881210 ttacccaccattcttcaaaggtaatctag 49881238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 50457957 - 50457985
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  50457957 ttacccaccattcttcaaaggtaatctag 50457985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 224
Target Start/End: Complemental strand, 50534667 - 50534639
Alignment:
Q  196 gttacccaccattcttcaaaggtaatcta 224  Q
    |||||||||||||||||||||||||||||    
T  50534667 gttacccaccattcttcaaaggtaatcta 50534639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 51363042 - 51363014
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  51363042 ttacccaccattcttcaaaggtaatctag 51363014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 53854576 - 53854604
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  53854576 ttacccaccattcttcaaaggtaatctag 53854604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 54805765 - 54805793
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  54805765 ttacccaccattcttcaaaggtaatctag 54805793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 55056406 - 55056434
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  55056406 ttacccaccattcttcaaaggtaatctag 55056434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 3123 - 3095
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  3123 ttacccaccattcttcaaaggtaatctag 3095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 2579 - 2607
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  2579 ttacccaccattcttcaaaggtaatctag 2607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 32596 - 32568
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  32596 ttacccaccattcttcaaaggtaatctag 32568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 39703 - 39731
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  39703 ttacccaccattcttcaaaggtaatctag 39731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 75391 - 75419
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  75391 ttacccaccattcttcaaaggtaatctag 75419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 29; Significance: 0.0000004; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 10028524 - 10028496
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  10028524 ttacccaccattcttcaaaggtaatctag 10028496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 15877586 - 15877558
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  15877586 ttacccaccattcttcaaaggtaatctag 15877558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 20165961 - 20165989
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  20165961 ttacccaccattcttcaaaggtaatctag 20165989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 22979794 - 22979822
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  22979794 ttacccaccattcttcaaaggtaatctag 22979822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 33332825 - 33332797
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  33332825 ttacccaccattcttcaaaggtaatctag 33332797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 33839862 - 33839890
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  33839862 ttacccaccattcttcaaaggtaatctag 33839890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 45063502 - 45063530
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  45063502 ttacccaccattcttcaaaggtaatctag 45063530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 45482694 - 45482666
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  45482694 ttacccaccattcttcaaaggtaatctag 45482666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 46913145 - 46913117
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  46913145 ttacccaccattcttcaaaggtaatctag 46913117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 47740478 - 47740506
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  47740478 ttacccaccattcttcaaaggtaatctag 47740506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 48609824 - 48609852
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  48609824 ttacccaccattcttcaaaggtaatctag 48609852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 49171509 - 49171537
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  49171509 ttacccaccattcttcaaaggtaatctag 49171537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 29; Significance: 0.0000004; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 599927 - 599899
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  599927 ttacccaccattcttcaaaggtaatctag 599899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 960051 - 960079
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  960051 ttacccaccattcttcaaaggtaatctag 960079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 1970746 - 1970718
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  1970746 ttacccaccattcttcaaaggtaatctag 1970718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 2892223 - 2892195
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  2892223 ttacccaccattcttcaaaggtaatctag 2892195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 5882541 - 5882513
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  5882541 ttacccaccattcttcaaaggtaatctag 5882513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 8615275 - 8615247
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  8615275 ttacccaccattcttcaaaggtaatctag 8615247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 16703401 - 16703373
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  16703401 ttacccaccattcttcaaaggtaatctag 16703373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 18101642 - 18101670
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  18101642 ttacccaccattcttcaaaggtaatctag 18101670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 19281202 - 19281230
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  19281202 ttacccaccattcttcaaaggtaatctag 19281230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 19415680 - 19415708
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  19415680 ttacccaccattcttcaaaggtaatctag 19415708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 22551208 - 22551236
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  22551208 ttacccaccattcttcaaaggtaatctag 22551236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 28947122 - 28947094
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  28947122 ttacccaccattcttcaaaggtaatctag 28947094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 30467750 - 30467778
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  30467750 ttacccaccattcttcaaaggtaatctag 30467778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 30743595 - 30743623
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  30743595 ttacccaccattcttcaaaggtaatctag 30743623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 29; Significance: 0.0000004; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 3466828 - 3466856
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  3466828 ttacccaccattcttcaaaggtaatctag 3466856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 5137750 - 5137722
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  5137750 ttacccaccattcttcaaaggtaatctag 5137722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 5185007 - 5184979
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  5185007 ttacccaccattcttcaaaggtaatctag 5184979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 15398629 - 15398657
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  15398629 ttacccaccattcttcaaaggtaatctag 15398657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 18479815 - 18479843
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  18479815 ttacccaccattcttcaaaggtaatctag 18479843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 24253417 - 24253389
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  24253417 ttacccaccattcttcaaaggtaatctag 24253389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 25831556 - 25831528
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  25831556 ttacccaccattcttcaaaggtaatctag 25831528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 40886174 - 40886202
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  40886174 ttacccaccattcttcaaaggtaatctag 40886202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 43326526 - 43326554
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  43326526 ttacccaccattcttcaaaggtaatctag 43326554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 29; Significance: 0.0000004; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 746500 - 746472
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  746500 ttacccaccattcttcaaaggtaatctag 746472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 2325036 - 2325064
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  2325036 ttacccaccattcttcaaaggtaatctag 2325064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 4034626 - 4034598
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  4034626 ttacccaccattcttcaaaggtaatctag 4034598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 6594605 - 6594633
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  6594605 ttacccaccattcttcaaaggtaatctag 6594633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 7892835 - 7892863
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  7892835 ttacccaccattcttcaaaggtaatctag 7892863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 10424629 - 10424601
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  10424629 ttacccaccattcttcaaaggtaatctag 10424601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 12814648 - 12814620
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  12814648 ttacccaccattcttcaaaggtaatctag 12814620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 13815365 - 13815393
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  13815365 ttacccaccattcttcaaaggtaatctag 13815393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 23901813 - 23901785
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  23901813 ttacccaccattcttcaaaggtaatctag 23901785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 26710379 - 26710351
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  26710379 ttacccaccattcttcaaaggtaatctag 26710351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 27024449 - 27024421
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  27024449 ttacccaccattcttcaaaggtaatctag 27024421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 27400437 - 27400409
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  27400437 ttacccaccattcttcaaaggtaatctag 27400409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 27651181 - 27651209
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  27651181 ttacccaccattcttcaaaggtaatctag 27651209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 28019968 - 28019996
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  28019968 ttacccaccattcttcaaaggtaatctag 28019996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 32327395 - 32327367
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  32327395 ttacccaccattcttcaaaggtaatctag 32327367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 32608414 - 32608386
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  32608414 ttacccaccattcttcaaaggtaatctag 32608386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 38997135 - 38997107
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  38997135 ttacccaccattcttcaaaggtaatctag 38997107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 40735498 - 40735470
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  40735498 ttacccaccattcttcaaaggtaatctag 40735470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 29; Significance: 0.0000004; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 4156212 - 4156240
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  4156212 ttacccaccattcttcaaaggtaatctag 4156240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 5980103 - 5980075
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  5980103 ttacccaccattcttcaaaggtaatctag 5980075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 5981205 - 5981177
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  5981205 ttacccaccattcttcaaaggtaatctag 5981177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 6327694 - 6327722
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  6327694 ttacccaccattcttcaaaggtaatctag 6327722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 17995098 - 17995126
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  17995098 ttacccaccattcttcaaaggtaatctag 17995126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 23221076 - 23221104
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  23221076 ttacccaccattcttcaaaggtaatctag 23221104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 23984790 - 23984762
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  23984790 ttacccaccattcttcaaaggtaatctag 23984762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 24245172 - 24245200
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  24245172 ttacccaccattcttcaaaggtaatctag 24245200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 24885536 - 24885508
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  24885536 ttacccaccattcttcaaaggtaatctag 24885508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 25058723 - 25058695
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  25058723 ttacccaccattcttcaaaggtaatctag 25058695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 26277212 - 26277184
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  26277212 ttacccaccattcttcaaaggtaatctag 26277184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 26525036 - 26525064
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  26525036 ttacccaccattcttcaaaggtaatctag 26525064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 27983734 - 27983762
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  27983734 ttacccaccattcttcaaaggtaatctag 27983762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 31040744 - 31040716
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  31040744 ttacccaccattcttcaaaggtaatctag 31040716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 31308036 - 31308008
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  31308036 ttacccaccattcttcaaaggtaatctag 31308008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 31980082 - 31980110
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  31980082 ttacccaccattcttcaaaggtaatctag 31980110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 33112964 - 33112992
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  33112964 ttacccaccattcttcaaaggtaatctag 33112992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 35692811 - 35692839
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  35692811 ttacccaccattcttcaaaggtaatctag 35692839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 38332006 - 38332034
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  38332006 ttacccaccattcttcaaaggtaatctag 38332034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 44662005 - 44661977
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  44662005 ttacccaccattcttcaaaggtaatctag 44661977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 45538188 - 45538160
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  45538188 ttacccaccattcttcaaaggtaatctag 45538160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 46616584 - 46616556
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  46616584 ttacccaccattcttcaaaggtaatctag 46616556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 46967188 - 46967216
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  46967188 ttacccaccattcttcaaaggtaatctag 46967216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 48373539 - 48373511
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  48373539 ttacccaccattcttcaaaggtaatctag 48373511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 49254122 - 49254150
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  49254122 ttacccaccattcttcaaaggtaatctag 49254150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 225
Target Start/End: Original strand, 51403154 - 51403182
Alignment:
Q  197 ttacccaccattcttcaaaggtaatctag 225  Q
    |||||||||||||||||||||||||||||    
T  51403154 ttacccaccattcttcaaaggtaatctag 51403182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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