View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14415_low_2 (Length: 614)
Name: NF14415_low_2
Description: NF14415
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14415_low_2 |
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Alignment Details
Target: chr1 (Bit Score: 342; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 342; E-Value: 0
Query Start/End: Original strand, 14 - 395
Target Start/End: Complemental strand, 7410267 - 7409888
Alignment:
| Q |
14 |
gaagagagagatctagataaggaggtaagtggtagaatcactttttaaggtagcattagtggccttttatgctggatttcagtgtacaattacaaattgg |
113 |
Q |
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| T |
7410267 |
gaagagagagatctagataaggaggtaagtggtggaatcactttttaaggtagcattagtggccttttatgctggatttcagtgtagaattacaaattgg |
7410168 |
T |
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| Q |
114 |
gagacattttcttttgtggaaatcttggttcttcttttagaaaaaagactttgtttcactttatccttaatttgagttatatgtttactaacaatatttt |
213 |
Q |
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| T |
7410167 |
gagacattttcttttgtggaaatcttggttcttcttttagaaaaa-gactttgtttcactttatccttaatttgagttatatgtttactaacaatatttt |
7410069 |
T |
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| Q |
214 |
cacgactttcaaagtatggattgtattgaaacaaactctcataattagcctttatcattttagattatttataattaaataaaatattgtgcaatcaagt |
313 |
Q |
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| T |
7410068 |
cacgactttcaaagtatggattgtattgaaacaaactctcataattagcctttatcattttagattatttataattaaataaaatattgtgcgatcaagt |
7409969 |
T |
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| Q |
314 |
aattgagctcaagctagtggttaatgaattttaacaatgacgaattattacctcaatcttaaaaaatatttgctaccaaaaa |
395 |
Q |
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| T |
7409968 |
aattgagctcaagctagtggttaatgaattttaccaatgacgaattattatctcaat-tttaaaaatatttgctaccaaaaa |
7409888 |
T |
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