View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14415_low_3 (Length: 500)

Name: NF14415_low_3
Description: NF14415
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14415_low_3
NF14415_low_3
[»] chr8 (45 HSPs)
chr8 (106-386)||(3712630-3712910)
chr8 (385-475)||(13138303-13138393)
chr8 (385-475)||(3293273-3293363)
chr8 (385-475)||(29790942-29791032)
chr8 (385-475)||(40013651-40013741)
chr8 (385-473)||(38845200-38845288)
chr8 (385-475)||(1580936-1581026)
chr8 (385-475)||(6470845-6470935)
chr8 (385-475)||(30289924-30290014)
chr8 (385-475)||(45081812-45081902)
chr8 (385-475)||(2805647-2805737)
chr8 (385-475)||(8351051-8351141)
chr8 (385-475)||(43066127-43066217)
chr8 (385-473)||(18809276-18809364)
chr8 (385-473)||(37709899-37709987)
chr8 (385-473)||(38739657-38739745)
chr8 (385-475)||(30380530-30380620)
chr8 (404-473)||(31127978-31128047)
chr8 (385-473)||(11854524-11854612)
chr8 (385-500)||(45253749-45253865)
chr8 (385-475)||(2986339-2986428)
chr8 (385-475)||(14522380-14522470)
chr8 (385-474)||(23764623-23764713)
chr8 (385-470)||(14847210-14847295)
chr8 (407-475)||(10658000-10658068)
chr8 (387-475)||(23248779-23248867)
chr8 (407-474)||(886239-886306)
chr8 (404-475)||(25256353-25256424)
chr8 (413-475)||(12893559-12893621)
chr8 (385-475)||(44123673-44123763)
chr8 (385-475)||(39361128-39361215)
chr8 (385-420)||(18809502-18809537)
chr8 (385-420)||(31127805-31127840)
chr8 (385-420)||(2805476-2805511)
chr8 (436-471)||(9302528-9302563)
chr8 (385-420)||(23249078-23249113)
chr8 (385-420)||(30290150-30290185)
chr8 (385-420)||(45082038-45082073)
chr8 (378-420)||(8350873-8350915)
chr8 (407-473)||(42785920-42785986)
chr8 (446-475)||(6470784-6470813)
chr8 (383-420)||(12893754-12893791)
chr8 (432-473)||(25173843-25173884)
chr8 (49-77)||(3712564-3712592)
chr8 (385-421)||(29708786-29708822)
[»] chr5 (46 HSPs)
chr5 (384-474)||(40316120-40316210)
chr5 (385-474)||(1830654-1830743)
chr5 (384-474)||(41411330-41411420)
chr5 (385-475)||(4925009-4925099)
chr5 (385-475)||(35290286-35290376)
chr5 (385-475)||(35448168-35448258)
chr5 (385-475)||(37516144-37516234)
chr5 (385-475)||(5213093-5213183)
chr5 (385-475)||(23988579-23988669)
chr5 (385-475)||(29627268-29627358)
chr5 (385-500)||(30779891-30780006)
chr5 (385-475)||(38697963-38698053)
chr5 (385-475)||(40512851-40512941)
chr5 (385-475)||(42148307-42148397)
chr5 (392-474)||(14475406-14475488)
chr5 (385-471)||(32334815-32334901)
chr5 (385-475)||(39036410-39036500)
chr5 (404-473)||(4300005-4300074)
chr5 (386-475)||(5364421-5364510)
chr5 (385-474)||(37843747-37843836)
chr5 (385-470)||(43067229-43067314)
chr5 (385-473)||(970138-970226)
chr5 (405-473)||(16048103-16048171)
chr5 (385-473)||(39405764-39405852)
chr5 (385-475)||(39894781-39894871)
chr5 (407-500)||(42421707-42421800)
chr5 (392-475)||(43517231-43517314)
chr5 (409-475)||(19889678-19889744)
chr5 (385-475)||(32002185-32002275)
chr5 (404-473)||(22613882-22613951)
chr5 (407-468)||(25563522-25563583)
chr5 (413-500)||(19868831-19868918)
chr5 (385-475)||(2863954-2864044)
chr5 (378-444)||(16954683-16954749)
chr5 (407-470)||(19087946-19088009)
chr5 (413-473)||(15268138-15268198)
chr5 (385-420)||(970364-970399)
chr5 (385-420)||(4299833-4299868)
chr5 (385-420)||(22613709-22613744)
chr5 (385-420)||(16048311-16048346)
chr5 (418-473)||(24520242-24520296)
chr5 (385-420)||(35447997-35448032)
chr5 (382-421)||(37304370-37304409)
chr5 (385-420)||(42148533-42148568)
chr5 (385-420)||(43067447-43067482)
chr5 (382-420)||(39895007-39895045)
[»] chr3 (49 HSPs)
chr3 (384-474)||(49057855-49057945)
chr3 (385-475)||(29728269-29728359)
chr3 (385-475)||(46483551-46483641)
chr3 (382-475)||(7459991-7460084)
chr3 (385-472)||(34827322-34827409)
chr3 (379-473)||(21906990-21907084)
chr3 (385-475)||(27848952-27849042)
chr3 (385-475)||(38492052-38492142)
chr3 (378-500)||(3547566-3547688)
chr3 (378-475)||(43137844-43137941)
chr3 (385-473)||(18659052-18659140)
chr3 (388-475)||(10571315-10571402)
chr3 (385-475)||(8559176-8559266)
chr3 (385-475)||(25097358-25097448)
chr3 (385-475)||(37832900-37832990)
chr3 (384-470)||(54840304-54840390)
chr3 (385-473)||(4238793-4238881)
chr3 (385-473)||(15503025-15503113)
chr3 (385-473)||(17052864-17052952)
chr3 (385-473)||(32951309-32951397)
chr3 (392-475)||(38833671-38833754)
chr3 (385-475)||(1327311-1327401)
chr3 (404-473)||(10435153-10435222)
chr3 (394-475)||(51062399-51062480)
chr3 (390-475)||(51392463-51392548)
chr3 (385-473)||(45167299-45167387)
chr3 (385-473)||(53066375-53066462)
chr3 (396-475)||(32285347-32285426)
chr3 (385-475)||(28690516-28690606)
chr3 (407-475)||(9145524-9145592)
chr3 (385-475)||(48707014-48707104)
chr3 (385-471)||(52668660-52668746)
chr3 (407-475)||(7671484-7671552)
chr3 (413-472)||(45093748-45093807)
chr3 (390-475)||(47638060-47638145)
chr3 (393-475)||(10437290-10437372)
chr3 (413-475)||(35718026-35718088)
chr3 (407-473)||(36665041-36665107)
chr3 (385-465)||(52550797-52550877)
chr3 (385-420)||(10435345-10435380)
chr3 (385-453)||(39435228-39435296)
chr3 (385-420)||(4238494-4238529)
chr3 (385-420)||(7459820-7459855)
chr3 (385-420)||(8559005-8559040)
chr3 (385-420)||(18659278-18659313)
chr3 (385-420)||(32951136-32951171)
chr3 (385-420)||(34827479-34827514)
chr3 (404-475)||(48143784-48143854)
chr3 (385-417)||(37833129-37833161)
[»] chr6 (23 HSPs)
chr6 (385-474)||(33121542-33121631)
chr6 (385-475)||(643602-643692)
chr6 (385-475)||(11114565-11114655)
chr6 (385-475)||(25435412-25435501)
chr6 (385-475)||(30237165-30237256)
chr6 (385-475)||(18991904-18991994)
chr6 (377-473)||(22020268-22020364)
chr6 (385-473)||(31854818-31854906)
chr6 (385-475)||(24150741-24150831)
chr6 (385-474)||(13207125-13207214)
chr6 (404-472)||(25163183-25163251)
chr6 (385-475)||(29403644-29403734)
chr6 (385-475)||(20662230-20662321)
chr6 (385-475)||(8796050-8796140)
chr6 (385-475)||(7098044-7098130)
chr6 (410-475)||(29986329-29986394)
chr6 (407-475)||(19068939-19069007)
chr6 (378-420)||(29979017-29979059)
chr6 (385-420)||(16696016-16696051)
chr6 (385-420)||(20662059-20662094)
chr6 (385-420)||(25163390-25163425)
chr6 (385-473)||(16434701-16434789)
chr6 (377-421)||(24825390-24825434)
[»] chr2 (45 HSPs)
chr2 (386-475)||(41463688-41463777)
chr2 (385-475)||(7443062-7443152)
chr2 (385-475)||(14372077-14372167)
chr2 (385-475)||(23671376-23671466)
chr2 (385-475)||(30708728-30708818)
chr2 (385-474)||(32776072-32776161)
chr2 (385-473)||(40598128-40598216)
chr2 (385-475)||(18718239-18718329)
chr2 (385-475)||(40425420-40425510)
chr2 (385-475)||(42038523-42038613)
chr2 (385-474)||(38963519-38963608)
chr2 (385-473)||(34826912-34827000)
chr2 (388-475)||(14707705-14707792)
chr2 (385-475)||(3987403-3987493)
chr2 (385-475)||(41172928-41173018)
chr2 (377-473)||(44330376-44330472)
chr2 (385-475)||(9877254-9877344)
chr2 (385-475)||(20517419-20517509)
chr2 (385-475)||(44283450-44283540)
chr2 (385-473)||(4045406-4045494)
chr2 (385-473)||(27559575-27559663)
chr2 (385-475)||(16941982-16942072)
chr2 (385-475)||(17012647-17012737)
chr2 (394-475)||(24283129-24283210)
chr2 (385-475)||(332278-332366)
chr2 (385-475)||(39418191-39418281)
chr2 (407-475)||(38137701-38137769)
chr2 (407-475)||(40898662-40898730)
chr2 (402-475)||(36199122-36199195)
chr2 (383-463)||(38588072-38588152)
chr2 (434-475)||(30776364-30776405)
chr2 (407-475)||(13399276-13399344)
chr2 (385-475)||(4045850-4045940)
chr2 (436-473)||(43925254-43925291)
chr2 (407-470)||(4083229-4083292)
chr2 (392-455)||(5030462-5030525)
chr2 (384-420)||(14707534-14707570)
chr2 (407-475)||(42951362-42951430)
chr2 (436-475)||(7106329-7106368)
chr2 (385-420)||(18718465-18718500)
chr2 (385-420)||(23671602-23671637)
chr2 (385-420)||(40425249-40425284)
chr2 (385-419)||(20917729-20917763)
chr2 (387-420)||(44283281-44283314)
chr2 (379-411)||(4137404-4137436)
[»] chr1 (50 HSPs)
chr1 (385-474)||(23569846-23569935)
chr1 (381-475)||(48219813-48219907)
chr1 (385-475)||(25531778-25531868)
chr1 (385-475)||(30529221-30529311)
chr1 (385-475)||(50876364-50876454)
chr1 (382-475)||(52378986-52379079)
chr1 (384-475)||(38458728-38458819)
chr1 (385-475)||(39354435-39354525)
chr1 (385-475)||(48264982-48265072)
chr1 (385-475)||(50539260-50539350)
chr1 (388-473)||(16266165-16266250)
chr1 (385-473)||(16265033-16265121)
chr1 (385-473)||(26441637-26441725)
chr1 (385-473)||(32988522-32988610)
chr1 (385-473)||(43680069-43680157)
chr1 (385-475)||(3529176-3529266)
chr1 (385-475)||(32565746-32565836)
chr1 (385-473)||(3898744-3898832)
chr1 (385-473)||(24982351-24982439)
chr1 (404-475)||(47222233-47222304)
chr1 (384-471)||(48376157-48376244)
chr1 (385-500)||(50481278-50481393)
chr1 (389-470)||(4605002-4605083)
chr1 (384-472)||(16751627-16751715)
chr1 (386-470)||(49805428-49805512)
chr1 (396-475)||(29161853-29161932)
chr1 (390-475)||(45235016-45235101)
chr1 (407-471)||(38738153-38738217)
chr1 (381-475)||(42708500-42708594)
chr1 (402-475)||(31971558-31971631)
chr1 (385-475)||(37281092-37281182)
chr1 (402-475)||(1849716-1849789)
chr1 (382-500)||(14075732-14075850)
chr1 (407-473)||(23330474-23330540)
chr1 (426-475)||(41501779-41501828)
chr1 (415-473)||(21034703-21034761)
chr1 (385-420)||(3898571-3898606)
chr1 (385-420)||(16265259-16265294)
chr1 (385-420)||(16266388-16266423)
chr1 (385-420)||(26441860-26441895)
chr1 (385-420)||(43680296-43680331)
chr1 (383-420)||(39354262-39354299)
chr1 (379-419)||(5606425-5606465)
chr1 (385-420)||(24982577-24982612)
chr1 (385-420)||(25532004-25532039)
chr1 (385-420)||(30529050-30529085)
chr1 (385-420)||(48264811-48264846)
chr1 (385-420)||(50876590-50876625)
chr1 (443-500)||(23340849-23340906)
chr1 (382-414)||(44240516-44240548)
[»] scaffold0051 (1 HSPs)
scaffold0051 (385-475)||(41388-41478)
[»] chr7 (46 HSPs)
chr7 (382-475)||(34478182-34478275)
chr7 (382-475)||(36819693-36819786)
chr7 (385-475)||(2400285-2400375)
chr7 (365-475)||(19072749-19072859)
chr7 (382-475)||(31466529-31466622)
chr7 (385-473)||(37231737-37231825)
chr7 (385-475)||(42086809-42086899)
chr7 (385-473)||(35500920-35501008)
chr7 (384-475)||(23474140-23474231)
chr7 (385-475)||(28185579-28185669)
chr7 (385-475)||(37951116-37951206)
chr7 (385-475)||(44479891-44479981)
chr7 (385-475)||(47080980-47081070)
chr7 (385-475)||(47713673-47713763)
chr7 (378-475)||(42834463-42834560)
chr7 (385-473)||(10464288-10464376)
chr7 (385-475)||(21392018-21392108)
chr7 (386-475)||(31110625-31110712)
chr7 (385-475)||(32619113-32619203)
chr7 (385-475)||(36859379-36859469)
chr7 (385-475)||(36905526-36905616)
chr7 (404-473)||(36643181-36643250)
chr7 (389-475)||(48531326-48531412)
chr7 (385-470)||(4612263-4612348)
chr7 (394-475)||(47537932-47538013)
chr7 (385-500)||(31497849-31497964)
chr7 (407-475)||(27916616-27916684)
chr7 (385-451)||(47713774-47713840)
chr7 (409-473)||(2450712-2450777)
chr7 (412-473)||(29770647-29770708)
chr7 (423-475)||(18795311-18795363)
chr7 (385-420)||(10464115-10464150)
chr7 (385-420)||(34478008-34478043)
chr7 (385-420)||(36643965-36644000)
chr7 (436-473)||(39982287-39982324)
chr7 (384-420)||(47081206-47081242)
chr7 (377-420)||(19072995-19073038)
chr7 (385-420)||(31466358-31466393)
chr7 (385-420)||(35500747-35500782)
chr7 (385-420)||(36819922-36819957)
chr7 (385-420)||(37231563-37231598)
chr7 (385-420)||(37950945-37950980)
chr7 (383-420)||(23473967-23474004)
chr7 (383-416)||(42834290-42834323)
chr7 (407-455)||(33613238-33613286)
chr7 (384-420)||(36905752-36905788)
[»] chr4 (60 HSPs)
chr4 (385-474)||(19170711-19170800)
chr4 (385-475)||(3901310-3901400)
chr4 (379-473)||(4264128-4264222)
chr4 (385-475)||(18360144-18360234)
chr4 (385-475)||(36602694-36602784)
chr4 (385-475)||(39786527-39786617)
chr4 (385-475)||(46212521-46212611)
chr4 (385-475)||(46803631-46803721)
chr4 (382-475)||(3442515-3442608)
chr4 (385-475)||(4209363-4209453)
chr4 (385-475)||(7738990-7739080)
chr4 (385-475)||(19525885-19525975)
chr4 (385-475)||(23255935-23256025)
chr4 (385-475)||(28166274-28166364)
chr4 (385-475)||(45198511-45198601)
chr4 (385-475)||(47579287-47579377)
chr4 (385-473)||(5735271-5735359)
chr4 (385-473)||(25644359-25644447)
chr4 (385-475)||(5123328-5123418)
chr4 (385-475)||(26205875-26205965)
chr4 (382-475)||(1377029-1377122)
chr4 (404-473)||(6923113-6923182)
chr4 (385-474)||(19652427-19652516)
chr4 (385-473)||(5744256-5744344)
chr4 (385-473)||(19634021-19634109)
chr4 (407-500)||(19731311-19731404)
chr4 (387-475)||(28151993-28152081)
chr4 (385-473)||(55190887-55190975)
chr4 (385-475)||(6494588-6494678)
chr4 (385-475)||(21859090-21859180)
chr4 (385-475)||(21914953-21915043)
chr4 (385-475)||(39260302-39260391)
chr4 (385-475)||(50033020-50033110)
chr4 (390-475)||(37688204-37688289)
chr4 (387-475)||(49768447-49768535)
chr4 (390-475)||(20678758-20678843)
chr4 (407-500)||(26659862-26659955)
chr4 (407-473)||(19631330-19631396)
chr4 (385-475)||(50035539-50035629)
chr4 (405-475)||(53568374-53568444)
chr4 (417-473)||(55997146-55997202)
chr4 (424-475)||(3443558-3443609)
chr4 (385-500)||(51737099-51737214)
chr4 (410-468)||(55014287-55014345)
chr4 (413-468)||(23603825-23603880)
chr4 (400-475)||(42187150-42187225)
chr4 (383-420)||(7738817-7738854)
chr4 (388-420)||(19525717-19525749)
chr4 (436-472)||(27976744-27976780)
chr4 (385-420)||(3442344-3442379)
chr4 (385-420)||(5735497-5735532)
chr4 (385-420)||(25644585-25644620)
chr4 (385-420)||(28152217-28152252)
chr4 (385-420)||(45198340-45198375)
chr4 (385-420)||(47579512-47579547)
chr4 (424-475)||(50971499-50971549)
chr4 (385-419)||(6922940-6922974)
chr4 (385-455)||(39195672-39195742)
chr4 (382-420)||(50971654-50971692)
chr4 (383-420)||(23603645-23603682)
[»] scaffold0366 (2 HSPs)
scaffold0366 (385-475)||(14059-14149)
scaffold0366 (385-475)||(10393-10483)
[»] scaffold0092 (1 HSPs)
scaffold0092 (385-475)||(44279-44369)
[»] scaffold0459 (1 HSPs)
scaffold0459 (385-475)||(12752-12842)
[»] scaffold0027 (2 HSPs)
scaffold0027 (385-468)||(117321-117404)
scaffold0027 (388-420)||(117547-117579)
[»] scaffold0111 (1 HSPs)
scaffold0111 (413-475)||(38531-38593)
[»] scaffold0007 (2 HSPs)
scaffold0007 (385-475)||(15387-15477)
scaffold0007 (385-420)||(15216-15251)
[»] scaffold0340 (1 HSPs)
scaffold0340 (385-470)||(14345-14430)
[»] scaffold0294 (1 HSPs)
scaffold0294 (426-473)||(12619-12666)


Alignment Details
Target: chr8 (Bit Score: 265; Significance: 1e-147; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 265; E-Value: 1e-147
Query Start/End: Original strand, 106 - 386
Target Start/End: Original strand, 3712630 - 3712910
Alignment:
Q  106 ctcagatggaggggacaccgacacagttaattcttttacagaacaaactcagttgaaaagttccaataaatcaacatcccaagaaatcaaccccaaaaaa 205  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  3712630 ctcagatggaggggacaccgacacagttaattcttttacagaacaaactcagttgaaaacttccaataaatcaacatcccaagaaatcaaccccaaaaaa 3712729  T
Q  206 ttgtatcgtctaaacaatgcaacaatctacaagacaacaacagaaagaacaacattgttgtgaaggaaactcaaatacaaccaaatccaatgaaatgaaa 305  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  3712730 ttgtatcatctaaacaatgcaacaatctacaagacaacaacagaaagaacaacattgttgtgaaggaaactcaaatacaaccaaatccaatgaaataaaa 3712829  T
Q  306 attccattgtatattatttgattgccgcttgtggccggtctccatttaaaaaagaaaatataataatattgttaattacta 386  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  3712830 attccattgtatattatttgattgccgcttgtggccggtctccattaaaaaaagaaaatataataatattgttaattacta 3712910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 385 - 475
Target Start/End: Complemental strand, 13138393 - 13138303
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    ||||||||| |||||||||||||||||||||||||||  |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  13138393 tactccctctgtccctcaataaatgacctagttgactctgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctact 13138303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 385 - 475
Target Start/End: Complemental strand, 3293363 - 3293273
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||||||||| ||||||||| ||||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  3293363 tactccctccgtccctaaataaatgatctagttgactctgacacatataccaatgcatatgttttatctttgatatcttcaattctctact 3293273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 385 - 475
Target Start/End: Original strand, 29790942 - 29791032
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||||||||| ||||||||||||||||||||  ||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  29790942 tactccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctact 29791032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 385 - 475
Target Start/End: Original strand, 40013651 - 40013741
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||||||||| ||||||||||||||||||||  ||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  40013651 tactccctccgtcccttaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctact 40013741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 385 - 473
Target Start/End: Original strand, 38845200 - 38845288
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctcta 473  Q
    |||||||||||||||| ||||||||||||||||||||  ||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  38845200 tactccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctcta 38845288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 385 - 475
Target Start/End: Complemental strand, 1581026 - 1580936
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||||||||| ||||||||||||||||||||  |||||| ||| |||||||||| ||||||||||||||||||||||||||||||    
T  1581026 tactccctccgtccctgaataaatgacctagttgactctgacacacgtatcaatgcatatattttatctttgatatcttcaattctctact 1580936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 385 - 475
Target Start/End: Original strand, 6470845 - 6470935
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    ||||||| ||||||||||||| |||||||||||||||  |||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  6470845 tactcccaccgtccctcaatatatgacctagttgactctgacacacgtatcaatgcatatgttttatctttgatatcttcaattctctact 6470935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 385 - 475
Target Start/End: Original strand, 30289924 - 30290014
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||||||||| ||||||||||||||||||||  |||| |  ||||||||||||||||||||||||||||||||||||||||||||    
T  30289924 tactccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatatgttttatctttgatatcttcaattctctact 30290014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 385 - 475
Target Start/End: Original strand, 45081812 - 45081902
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||||||||| ||||||| ||||||||||||  ||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  45081812 tactccctccgtccctaaataaataacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctact 45081902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 385 - 475
Target Start/End: Complemental strand, 2805737 - 2805647
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||||||||| ||||||||||| ||||||||  |||| |  ||||||||||||||||||||||||||||||||||||||||||||    
T  2805737 tactccctccgtccctaaataaatgacccagttgactctgacatacataccaatgcatatgttttatctttgatatcttcaattctctact 2805647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 385 - 475
Target Start/End: Complemental strand, 8351141 - 8351051
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||||||||| ||||| ||| ||||||||||  |||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  8351141 tactccctccgtccctaaataagtgatctagttgactctgacacacgtaccagtgcatatgttttatctttgatatcttcaattctctact 8351051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 385 - 475
Target Start/End: Original strand, 43066127 - 43066217
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||| ||||||||||| ||||||||||||||||||||  ||||||  ||||||||||||||||||||||||||||||||||||||| ||||    
T  43066127 tactacctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctttact 43066217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 385 - 473
Target Start/End: Original strand, 18809276 - 18809364
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctcta 473  Q
    |||||||||| ||||  | ||||||| |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  18809276 tactccctccatcccatattaaatgatctagttgagttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctcta 18809364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 385 - 473
Target Start/End: Original strand, 37709899 - 37709987
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctcta 473  Q
    |||||||||||||||| ||||||||||||||||||||   |||||  |||||||| |||||||||||||||||||||||||||||||||    
T  37709899 tactccctccgtccctaaataaatgacctagttgactctaacacacataccaatgtatatgttttatctttgatatcttcaattctcta 37709987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 385 - 473
Target Start/End: Original strand, 38739657 - 38739745
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctcta 473  Q
    |||||||||||||| | ||||||||||||||||||||  ||||||  |||||||||||||||||||||||| |||||||||||||||||    
T  38739657 tactccctccgtccttaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttaatatcttcaattctcta 38739745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 385 - 475
Target Start/End: Original strand, 30380530 - 30380620
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||||||||| ||||| ||| ||| ||||||  ||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  30380530 tactccctccgtccctaaataagtgatctaattgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctact 30380620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 404 - 473
Target Start/End: Complemental strand, 31128047 - 31127978
Alignment:
Q  404 taaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctcta 473  Q
    |||||||  ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  31128047 taaatgatttagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctcta 31127978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 385 - 473
Target Start/End: Original strand, 11854524 - 11854612
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctcta 473  Q
    |||||||||||||||  | |||| || |||||||||||||||||| |||||||||||||| |||||| |||||||||||||||||||||    
T  11854524 tactccctccgtcccatattaaacgatctagttgacttcgacacacgtaccaatgcatatattttatttttgatatcttcaattctcta 11854612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 385 - 500
Target Start/End: Original strand, 45253749 - 45253865
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgac-acatgtaccaatgcatatgttttatctttgatatcttcaattctctactnnnnnnnt 483  Q
    ||||||||| |||||| |||| |||| |||||||||| |||| ||| ||||||||||||||||||||| ||||||||||||||||||||||        |    
T  45253749 tactccctctgtcccttaatagatgatctagttgactccgacgacacgtaccaatgcatatgttttatttttgatatcttcaattctctacaaaaaaaat 45253848  T
Q  484 tatgaaaatttaatatt 500  Q
    |||||||||||||||||    
T  45253849 tatgaaaatttaatatt 45253865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 385 - 475
Target Start/End: Original strand, 2986339 - 2986428
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    ||||||||||||| || ||||| ||||||||||||||  ||||||  ||||||||||||||||||||| ||||||||||||||||||||||    
T  2986339 tactccctccgtctctgaataagtgacctagttgactctgacacacataccaatgcatatgttttatc-ttgatatcttcaattctctact 2986428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 385 - 475
Target Start/End: Original strand, 14522380 - 14522470
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||| | |||||||||| |||| |||||||| ||  ||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  14522380 tactcccttcatccctcaatagatgatctagttgattttaacacacgtatcaatgcatatgttttatctttgatatcttcaattctctact 14522470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 385 - 474
Target Start/End: Complemental strand, 23764713 - 23764623
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacat-gtaccaatgcatatgttttatctttgatatcttcaattctctac 474  Q
    ||||| ||||||||||| |||||| | ||||||||||||||||||  ||||||||||||||||||||| |||||||| |||||||||||||    
T  23764713 tactctctccgtccctcgataaataatctagttgacttcgacacaacgtaccaatgcatatgttttatatttgatatattcaattctctac 23764623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 385 - 470
Target Start/End: Original strand, 14847210 - 14847295
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattct 470  Q
    |||||||| |||||||| ||| ||||||||||||| | ||||||| | ||||||||||||||||||||||||||||||| ||||||    
T  14847210 tactccctacgtccctcgatagatgacctagttgattccgacacacgcaccaatgcatatgttttatctttgatatctttaattct 14847295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 407 - 475
Target Start/End: Original strand, 10658000 - 10658068
Alignment:
Q  407 atgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    ||||| ||||||||| |||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  10658000 atgacttagttgactccgacacatgtaccaacacatatgttttatctttgatatcttcaattctctact 10658068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 387 - 475
Target Start/End: Original strand, 23248779 - 23248867
Alignment:
Q  387 ctccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||| ||| | ||||||||||||||||||||   |||||| || |||||||||||||||||||||||||| ||||||||||||||    
T  23248779 ctccctccctccttaaataaatgacctagttgactctaacacatatatcaatgcatatgttttatctttgatatattcaattctctact 23248867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 407 - 474
Target Start/End: Complemental strand, 886306 - 886239
Alignment:
Q  407 atgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctac 474  Q
    ||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  886306 atgacctggttgactccgacacacgtaccaatgcatatgttttatctttgatatctttaattctctac 886239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 404 - 475
Target Start/End: Original strand, 25256353 - 25256424
Alignment:
Q  404 taaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    ||||||| |||||||||| |||||| | |||||||||| |||||||||||||||||||||||||||||||||    
T  25256353 taaatgatctagttgactccgacacttataccaatgcaaatgttttatctttgatatcttcaattctctact 25256424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 413 - 475
Target Start/End: Original strand, 12893559 - 12893621
Alignment:
Q  413 tagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    ||||||||| ||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  12893559 tagttgactccgacacacgtatcaatgcatatgttttatctttgatatcttcaattctctact 12893621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 385 - 475
Target Start/End: Original strand, 44123673 - 44123763
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    ||||| |||||||||  | || |||| |||||||||| ||||||| ||| ||||||||||||||||||||||| |||||||||||||||||    
T  44123673 tactctctccgtcccatattagatgatctagttgactccgacacacgtatcaatgcatatgttttatctttgaaatcttcaattctctact 44123763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 385 - 475
Target Start/End: Original strand, 39361128 - 39361215
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    ||||| |||||| ||| ||||||||| ||||   |||  ||||||  |||||||||||||||||||| |||||||||||||||||||||||    
T  39361128 tactctctccgttcctaaataaatgatctag---actctgacacacataccaatgcatatgttttatttttgatatcttcaattctctact 39361215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 385 - 420
Target Start/End: Complemental strand, 18809537 - 18809502
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgac 420  Q
    ||||||||||||||||||||||||||||||||||||    
T  18809537 tactccctccgtccctcaataaatgacctagttgac 18809502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 385 - 420
Target Start/End: Original strand, 31127805 - 31127840
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgac 420  Q
    ||||||||||||||||||||||||||||||||||||    
T  31127805 tactccctccgtccctcaataaatgacctagttgac 31127840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 420
Target Start/End: Original strand, 2805476 - 2805511
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgac 420  Q
    |||||||||||||||| |||||||||||||||||||    
T  2805476 tactccctccgtcccttaataaatgacctagttgac 2805511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 436 - 471
Target Start/End: Complemental strand, 9302563 - 9302528
Alignment:
Q  436 aatgcatatgttttatctttgatatcttcaattctc 471  Q
    |||| |||||||||||||||||||||||||||||||    
T  9302563 aatgtatatgttttatctttgatatcttcaattctc 9302528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 420
Target Start/End: Complemental strand, 23249113 - 23249078
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgac 420  Q
    |||||||||||||||| |||||||||||||||||||    
T  23249113 tactccctccgtcccttaataaatgacctagttgac 23249078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 420
Target Start/End: Complemental strand, 30290185 - 30290150
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgac 420  Q
    |||||||||||||||| |||||||||||||||||||    
T  30290185 tactccctccgtcccttaataaatgacctagttgac 30290150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 420
Target Start/End: Complemental strand, 45082073 - 45082038
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgac 420  Q
    |||||||||||||||| |||||||||||||||||||    
T  45082073 tactccctccgtcccttaataaatgacctagttgac 45082038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 378 - 420
Target Start/End: Original strand, 8350873 - 8350915
Alignment:
Q  378 taattactactccctccgtccctcaataaatgacctagttgac 420  Q
    |||||| |||||||||| ||||| |||||||||||||||||||    
T  8350873 taattaatactccctccatcccttaataaatgacctagttgac 8350915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 407 - 473
Target Start/End: Original strand, 42785920 - 42785986
Alignment:
Q  407 atgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctcta 473  Q
    |||||||||||||||  ||||||| |||||||||||||  ||||||||| ||| ||| |||| ||||    
T  42785920 atgacctagttgactcagacacatataccaatgcatattatttatctttaataactttaattatcta 42785986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 475
Target Start/End: Complemental strand, 6470813 - 6470784
Alignment:
Q  446 ttttatctttgatatcttcaattctctact 475  Q
    ||||||||||||||||||||||||||||||    
T  6470813 ttttatctttgatatcttcaattctctact 6470784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 420
Target Start/End: Complemental strand, 12893791 - 12893754
Alignment:
Q  383 actactccctccgtccctcaataaatgacctagttgac 420  Q
    |||||||||||||||||||| ||||||||||| |||||    
T  12893791 actactccctccgtccctcagtaaatgacctatttgac 12893754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 432 - 473
Target Start/End: Complemental strand, 25173884 - 25173843
Alignment:
Q  432 taccaatgcatatgttttatctttgatatcttcaattctcta 473  Q
    ||||||| |||||||||||||||| |||||||||||| ||||    
T  25173884 taccaatacatatgttttatctttaatatcttcaattttcta 25173843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 49 - 77
Target Start/End: Original strand, 3712564 - 3712592
Alignment:
Q  49 aaagatcttttctatttcaaattcaatcg 77  Q
    |||||||||||||||||||||||||||||    
T  3712564 aaagatcttttctatttcaaattcaatcg 3712592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 29708822 - 29708786
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgact 421  Q
    |||||||||||||||| ||||| ||||||||||||||    
T  29708822 tactccctccgtcccttaataagtgacctagttgact 29708786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 83; Significance: 4e-39; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 384 - 474
Target Start/End: Original strand, 40316120 - 40316210
Alignment:
Q  384 ctactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctac 474  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40316120 ctactccctccgtccctcaatagatgacttagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctac 40316210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 385 - 474
Target Start/End: Original strand, 1830654 - 1830743
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctac 474  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1830654 tactccctccgtccctcaatagatgacttagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctac 1830743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 384 - 474
Target Start/End: Complemental strand, 41411420 - 41411330
Alignment:
Q  384 ctactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctac 474  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  41411420 ctactccctccgtccctcaatagatgacttagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctac 41411330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 385 - 475
Target Start/End: Complemental strand, 4925099 - 4925009
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    ||||||||||||||||||||| ||||||||||||||   |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  4925099 tactccctccgtccctcaatagatgacctagttgaccctgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctact 4925009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 385 - 475
Target Start/End: Original strand, 35290286 - 35290376
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    ||||||||||||||||||||| |||||||||||||||  |||||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  35290286 tactccctccgtccctcaatagatgacctagttgactctgacacacgtaccaatgcatatattttatctttgatatcttcaattctctact 35290376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 385 - 475
Target Start/End: Complemental strand, 35448258 - 35448168
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||||||||| ||||||||||||||||||||  ||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  35448258 tactccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctact 35448168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 385 - 475
Target Start/End: Original strand, 37516144 - 37516234
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    ||||||||||||||||||||| |||| ||||||||||  |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  37516144 tactccctccgtccctcaatagatgatctagttgactctgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctact 37516234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 385 - 475
Target Start/End: Complemental strand, 5213183 - 5213093
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||||||||| ||||| ||||||||||||||  |||||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  5213183 tactccctccgtccctgaataagtgacctagttgactctgacacacgtaccaatgcatatgttttatctttaatatcttcaattctctact 5213093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 385 - 475
Target Start/End: Original strand, 23988579 - 23988669
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||||||||| ||||||||||||||||||||  ||||||  ||||||||||||||||||||||||||||||||||||| ||||||    
T  23988579 tactccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattatctact 23988669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 385 - 475
Target Start/End: Original strand, 29627268 - 29627358
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||||||||| ||||||||||||||||||||  ||||||  || |||||||||||||||||||||||||||||||||||||||||    
T  29627268 tactccctccgtccctaaataaatgacctagttgactctgacacacatatcaatgcatatgttttatctttgatatcttcaattctctact 29627358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 385 - 500
Target Start/End: Complemental strand, 30780006 - 30779891
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctactnnnnnnntt 484  Q
    |||||||||||| |||||||| ||||||||||||||| ||||||| |||||||| |||||||||||||||| ||||||||||||| |||||       ||    
T  30780006 tactccctccgttcctcaatagatgacctagttgactccgacacacgtaccaatacatatgttttatctttcatatcttcaattcactactaaaaaaatt 30779907  T
Q  485 atgaaaatttaatatt 500  Q
    ||||||||||||||||    
T  30779906 atgaaaatttaatatt 30779891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 385 - 475
Target Start/End: Original strand, 38697963 - 38698053
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||||||||| ||||||||||||| ||||||  ||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  38697963 tactccctccgtccctaaataaatgacctaattgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctact 38698053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 385 - 475
Target Start/End: Complemental strand, 40512941 - 40512851
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||||||||| ||||| ||||||||||||||  ||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  40512941 tactccctccgtccctaaataagtgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctact 40512851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 385 - 475
Target Start/End: Original strand, 42148307 - 42148397
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||||||||| ||||||||| ||||||||||  ||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  42148307 tactccctccgtccctaaataaatgatctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctact 42148397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 392 - 474
Target Start/End: Complemental strand, 14475488 - 14475406
Alignment:
Q  392 tccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctac 474  Q
    ||||||||| |||| ||||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  14475488 tccgtcccttaatagatgacctagttgactccgacacacgtacaaatgcatatgttttatctttgatatcttcaattctctac 14475406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 385 - 471
Target Start/End: Complemental strand, 32334901 - 32334815
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctc 471  Q
    ||||||||| |||||| ||||||||||||||||||||  ||||||  ||||||||||||||||||||||||||||||||||||||||    
T  32334901 tactccctctgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctc 32334815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 385 - 475
Target Start/End: Original strand, 39036410 - 39036500
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    ||||||||||||| ||||||| ||||| |||||||||  |||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  39036410 tactccctccgtctctcaatagatgacatagttgactctgacacacgtaccaatgtatatgttttatctttgatatcttcaattctctact 39036500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 404 - 473
Target Start/End: Complemental strand, 4300074 - 4300005
Alignment:
Q  404 taaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctcta 473  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  4300074 taaatgatctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctcta 4300005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 386 - 475
Target Start/End: Original strand, 5364421 - 5364510
Alignment:
Q  386 actccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    ||||||||||||||| ||||| ||||||||||||||  ||||||  ||||||||||||||||||||||||||||| ||||||||||||||    
T  5364421 actccctccgtccctaaataagtgacctagttgactctgacacacataccaatgcatatgttttatctttgatatattcaattctctact 5364510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 385 - 474
Target Start/End: Complemental strand, 37843836 - 37843747
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctac 474  Q
    ||||| || |||||||||||| |||||||||||||||  |||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  37843836 tactctcttcgtccctcaatagatgacctagttgactctgacacacgtaccaatgcatatgttttatatttgatatcttcaattctctac 37843747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 385 - 470
Target Start/End: Original strand, 43067229 - 43067314
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattct 470  Q
    |||| ||||||||||  | ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  43067229 tacttcctccgtcccatattaaatgatctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattct 43067314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 385 - 473
Target Start/End: Original strand, 970138 - 970226
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctcta 473  Q
    ||||||||||||| |  | ||||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  970138 tactccctccgtctcatattaaatgatctagttgacttcgacacacgtaccaatgcatatgttttatctttgttatcttcaattctcta 970226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 405 - 473
Target Start/End: Original strand, 16048103 - 16048171
Alignment:
Q  405 aaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctcta 473  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  16048103 aaatgatctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctcta 16048171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 385 - 473
Target Start/End: Original strand, 39405764 - 39405852
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctcta 473  Q
    |||||||||||||||  | ||||||| |||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||||    
T  39405764 tactccctccgtcccatattaaatgatctagttgacttcgagacacgtaccaatgcatatgttttatctttaatatcttcaattctcta 39405852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 385 - 475
Target Start/End: Original strand, 39894781 - 39894871
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||||||||| ||||| ||| ||||||||||  |||| |  ||||||||||||||||||||||||||||||||||||||||||||    
T  39894781 tactccctccgtccctaaataagtgatctagttgactctgacatacataccaatgcatatgttttatctttgatatcttcaattctctact 39894871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 407 - 500
Target Start/End: Original strand, 42421707 - 42421800
Alignment:
Q  407 atgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctactnnnnnnnttatgaaaatttaatatt 500  Q
    |||| |||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||    
T  42421707 atgatctagttgactccgacacacgtacctatgcatatgttttatctttgatatcttcaattctctactaaaaaaattatgaaaatttaatatt 42421800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 392 - 475
Target Start/End: Complemental strand, 43517314 - 43517231
Alignment:
Q  392 tccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||| ||||||||| |||||||||||||||  |||||| |||| |||||||||||||||||||||||||| |||||||||||||    
T  43517314 tccgcccctcaatagatgacctagttgactctgacacacgtactaatgcatatgttttatctttgatatcatcaattctctact 43517231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 409 - 475
Target Start/End: Original strand, 19889678 - 19889744
Alignment:
Q  409 gacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    ||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  19889678 gacctagttgactccgatacacgtaccaatgcatatgttttatctttgatatcttcaattctctact 19889744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 385 - 475
Target Start/End: Complemental strand, 32002275 - 32002185
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||||||| | ||||||||| ||| ||||||  |||| |  ||||||||||||||||||||||||||||||||||||||||||||    
T  32002275 tactccctccgtccttaaataaatgatctacttgactctgacatacataccaatgcatatgttttatctttgatatcttcaattctctact 32002185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 404 - 473
Target Start/End: Complemental strand, 22613951 - 22613882
Alignment:
Q  404 taaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctcta 473  Q
    ||||||| ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  22613951 taaatgatctagttgacttagacacacgtaccaatgcatatgttttatctttgatatcttcaattttcta 22613882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 407 - 468
Target Start/End: Original strand, 25563522 - 25563583
Alignment:
Q  407 atgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaatt 468  Q
    ||||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||    
T  25563522 atgacctagttgacttcaacacacgttccaatgcatatgttttatctttgatatcttcaatt 25563583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 413 - 500
Target Start/End: Complemental strand, 19868918 - 19868831
Alignment:
Q  413 tagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctactnnnnnnnttatgaaaatttaatatt 500  Q
    ||||||||| ||||||| |||||||||||||||||||||||||| ||| ||||||| ||||||       ||||||||||||||||||    
T  19868918 tagttgactccgacacacgtaccaatgcatatgttttatctttgctattttcaattgtctactaaaaatattatgaaaatttaatatt 19868831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 385 - 475
Target Start/End: Original strand, 2863954 - 2864044
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    ||||| |||||| ||  |||| |||| |||||||||| || |||||||||||||  ||| | |||||||||||||||||||||||||||||    
T  2863954 tactcactccgttccagaatagatgatctagttgactccgtcacatgtaccaatatatacgctttatctttgatatcttcaattctctact 2864044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 378 - 444
Target Start/End: Original strand, 16954683 - 16954749
Alignment:
Q  378 taattactactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatat 444  Q
    |||||| ||||||||||||||||||||| ||||| |||||||||  |||||| ||||||||||||||    
T  16954683 taattaatactccctccgtccctcaatagatgacttagttgactctgacacacgtaccaatgcatat 16954749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 407 - 470
Target Start/End: Complemental strand, 19088009 - 19087946
Alignment:
Q  407 atgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattct 470  Q
    ||||| ||||||||| ||||||| ||||||||||||| ||||||| | ||||||||||||||||    
T  19088009 atgacgtagttgactccgacacacgtaccaatgcataagttttatttatgatatcttcaattct 19087946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 413 - 473
Target Start/End: Original strand, 15268138 - 15268198
Alignment:
Q  413 tagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctcta 473  Q
    ||||||||| ||||||| |||  |||||||||||||||| ||| |||||||||||||||||    
T  15268138 tagttgactccgacacacgtattaatgcatatgttttatttttaatatcttcaattctcta 15268198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 385 - 420
Target Start/End: Complemental strand, 970399 - 970364
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgac 420  Q
    ||||||||||||||||||||||||||||||||||||    
T  970399 tactccctccgtccctcaataaatgacctagttgac 970364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 385 - 420
Target Start/End: Original strand, 4299833 - 4299868
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgac 420  Q
    ||||||||||||||||||||||||||||||||||||    
T  4299833 tactccctccgtccctcaataaatgacctagttgac 4299868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 385 - 420
Target Start/End: Original strand, 22613709 - 22613744
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgac 420  Q
    ||||||||||||||||||||||||||||||||||||    
T  22613709 tactccctccgtccctcaataaatgacctagttgac 22613744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 420
Target Start/End: Complemental strand, 16048346 - 16048311
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgac 420  Q
    |||||| |||||||||||||||||||||||||||||    
T  16048346 tactccgtccgtccctcaataaatgacctagttgac 16048311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 418 - 473
Target Start/End: Original strand, 24520242 - 24520296
Alignment:
Q  418 gacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctcta 473  Q
    |||| ||||||| ||| ||||| ||||||||||| |||||||||||||||||||||    
T  24520242 gactccgacacacgtatcaatgtatatgttttat-tttgatatcttcaattctcta 24520296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 420
Target Start/End: Original strand, 35447997 - 35448032
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgac 420  Q
    |||||||||||||||| |||||||||||||||||||    
T  35447997 tactccctccgtcccttaataaatgacctagttgac 35448032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 382 - 421
Target Start/End: Complemental strand, 37304409 - 37304370
Alignment:
Q  382 tactactccctccgtccctcaataaatgacctagttgact 421  Q
    ||||||||||||||||||| ||||| ||||||||||||||    
T  37304409 tactactccctccgtccctgaataagtgacctagttgact 37304370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 420
Target Start/End: Complemental strand, 42148568 - 42148533
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgac 420  Q
    |||||||||||||||| |||||||||||||||||||    
T  42148568 tactccctccgtcccttaataaatgacctagttgac 42148533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 420
Target Start/End: Complemental strand, 43067482 - 43067447
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgac 420  Q
    |||||| |||||||||||||||||||||||||||||    
T  43067482 tactccatccgtccctcaataaatgacctagttgac 43067447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 382 - 420
Target Start/End: Complemental strand, 39895045 - 39895007
Alignment:
Q  382 tactactccctccgtccctcaataaatgacctagttgac 420  Q
    ||||||||||||||||||| ||||||||||| |||||||    
T  39895045 tactactccctccgtcccttaataaatgacccagttgac 39895007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 83; Significance: 4e-39; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 384 - 474
Target Start/End: Original strand, 49057855 - 49057945
Alignment:
Q  384 ctactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctac 474  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  49057855 ctacttcctccgtccctcaataaatgacctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctac 49057945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 385 - 475
Target Start/End: Complemental strand, 29728359 - 29728269
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||||||||| ||||||||||||| ||||||    
T  29728359 tactccctccgtccctcaataaatgacctagttgactctgacacaagtaccaatgcatatgttttatcttagatatcttcaattttctact 29728269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 385 - 475
Target Start/End: Original strand, 46483551 - 46483641
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||| |||||||||||||| |||||||||||||||  |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  46483551 tactccatccgtccctcaatagatgacctagttgactctgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctact 46483641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 382 - 475
Target Start/End: Complemental strand, 7460084 - 7459991
Alignment:
Q  382 tactactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    ||||||| ||||||||||| ||||||||||||||||||||  ||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  7460084 tactacttcctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctact 7459991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 385 - 472
Target Start/End: Original strand, 34827322 - 34827409
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctct 472  Q
    |||||||||||||||| ||||| ||||||||||||||  |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  34827322 tactccctccgtccctgaataagtgacctagttgactctgacacacgtaccaatgcatatgttttatctttgatatcttcaattctct 34827409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 379 - 473
Target Start/End: Original strand, 21906990 - 21907084
Alignment:
Q  379 aattactactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctcta 473  Q
    ||||| |||||||||||||||||||||||||| ||||||||||  ||||||  ||||||||||||||||||||||||||||||||||||| ||||    
T  21906990 aattattactccctccgtccctcaataaatgatctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattatcta 21907084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 385 - 475
Target Start/End: Original strand, 27848952 - 27849042
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||||||||||| || |||||||||||||||| |||| |  ||||||||||||||||||||||||||||||||||||||||||||    
T  27848952 tactccctccgtccctcattagatgacctagttgactttgacatacataccaatgcatatgttttatctttgatatcttcaattctctact 27849042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 385 - 475
Target Start/End: Original strand, 38492052 - 38492142
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||||||||| ||||| ||||||||||||||  |||||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  38492052 tactccctccgtccctgaataagtgacctagttgactctgacacacgtaccaatgcatatgttttatctttaatatcttcaattctctact 38492142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 378 - 500
Target Start/End: Complemental strand, 3547688 - 3547566
Alignment:
Q  378 taattactactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctactnn 477  Q
    |||||| |||||||||||||||  | || |||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||||      
T  3547688 taattaatactccctccgtcccatattagatgacctaattgactccgacacacgtaccaatgcatatgttttatctttgatatcttcaattatctactaa 3547589  T
Q  478 nnnnnttatgaaaatttaatatt 500  Q
         ||||||||||||||||||    
T  3547588 aaaaattatgaaaatttaatatt 3547566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 378 - 475
Target Start/End: Original strand, 43137844 - 43137941
Alignment:
Q  378 taattactactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||| |||||||||||||||| ||||||||| ||||||||||  ||||||  ||||||||||||||||||||||||||||| ||||||||||||||    
T  43137844 taattaatactccctccgtccctaaataaatgatctagttgactctgacacacataccaatgcatatgttttatctttgatattttcaattctctact 43137941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 385 - 473
Target Start/End: Original strand, 18659052 - 18659140
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctcta 473  Q
    |||||||||||||||| ||||||||| ||||||||||  ||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  18659052 tactccctccgtccctaaataaatgatctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctcta 18659140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 388 - 475
Target Start/End: Complemental strand, 10571402 - 10571315
Alignment:
Q  388 tccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||||||| |||||||||||||||||||  ||||||  ||||||| ||||||||||||||||||||||||||||||||||||    
T  10571402 tccctccgtccctcgataaatgacctagttgactctgacacacataccaatacatatgttttatctttgatatcttcaattctctact 10571315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 385 - 475
Target Start/End: Complemental strand, 8559266 - 8559176
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||| ||||||||| ||||||||||||||||||||  ||||||  |||||||||||||||||||||||| |||||||||||||||||||    
T  8559266 tactccatccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttaatatcttcaattctctact 8559176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 385 - 475
Target Start/End: Complemental strand, 25097448 - 25097358
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||||| |||||||| ||||| |||||||||   ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  25097448 tactccctccgtacctcaatagatgacttagttgactctaacacacgtaccaatgcatatgttttatctttgatatcttcaattctctact 25097358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 385 - 475
Target Start/End: Original strand, 37832900 - 37832990
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||||||||| |||||||||| |||||||||  ||||||  |||||||||||||||||||| |||||||||||||||||||||||    
T  37832900 tactccctccgtccctaaataaatgacatagttgactctgacacacataccaatgcatatgttttatttttgatatcttcaattctctact 37832990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 384 - 470
Target Start/End: Complemental strand, 54840390 - 54840304
Alignment:
Q  384 ctactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattct 470  Q
    ||||||||||| ||||| ||||||||||||||||||||  ||||||  |||||||||||||||||||||||||||||||||||||||    
T  54840390 ctactccctccatccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattct 54840304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 385 - 473
Target Start/End: Complemental strand, 4238881 - 4238793
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctcta 473  Q
    |||||||||||| ||  | ||||||| |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  4238881 tactccctccgttccatattaaatgatctagttgacttcgacacacgtaccaatgcatatgttttatctttaatatcttcaattctcta 4238793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 385 - 473
Target Start/End: Original strand, 15503025 - 15503113
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctcta 473  Q
    ||||||||||||||||||||| |||||||| |||||| ||||| | ||| |||||||||||||||||||||||||| ||||||||||||    
T  15503025 tactccctccgtccctcaatagatgacctaattgactccgacatacgtatcaatgcatatgttttatctttgatatattcaattctcta 15503113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 385 - 473
Target Start/End: Original strand, 17052864 - 17052952
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctcta 473  Q
    ||||||||||||| |  | ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  17052864 tactccctccgtctcatattaaatgatctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattttcta 17052952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 385 - 473
Target Start/End: Complemental strand, 32951397 - 32951309
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctcta 473  Q
    |||||||||||||||  | ||||||| ||||||||||||||||||  ||||||||||||||||||||||||| ||||||||||||||||    
T  32951397 tactccctccgtcccatattaaatgatctagttgacttcgacacacataccaatgcatatgttttatctttggtatcttcaattctcta 32951309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 392 - 475
Target Start/End: Original strand, 38833671 - 38833754
Alignment:
Q  392 tccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    ||||||||| ||||| ||||||||||||||  ||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  38833671 tccgtccctaaataagtgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctact 38833754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 385 - 475
Target Start/End: Original strand, 1327311 - 1327401
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||||||||| ||||||||| ||||||||||   ||| |  ||||||||||||||||||||||||||||||||||||||||||||    
T  1327311 tactccctccgtccctaaataaatgatctagttgactcttacatacataccaatgcatatgttttatctttgatatcttcaattctctact 1327401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 404 - 473
Target Start/End: Original strand, 10435153 - 10435222
Alignment:
Q  404 taaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctcta 473  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  10435153 taaatgatctagttgacttcgacacacgtaccaatgcatatgttttatctttaatatcttcaattctcta 10435222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 394 - 475
Target Start/End: Original strand, 51062399 - 51062480
Alignment:
Q  394 cgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    ||||||| ||||| ||||||||||||||  ||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  51062399 cgtccctaaataagtgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctact 51062480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 390 - 475
Target Start/End: Complemental strand, 51392548 - 51392463
Alignment:
Q  390 cctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||| |||||| ||||||||||||||||||||   |||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  51392548 cctctgtccctaaataaatgacctagttgactcttacacacataccaatgcatatgttttatctttgatatcttcaattctctact 51392463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 385 - 473
Target Start/End: Original strand, 45167299 - 45167387
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctcta 473  Q
    |||||| ||||| | | ||||||||||||||||||||  ||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  45167299 tactccatccgttcttaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctcta 45167387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 385 - 473
Target Start/End: Original strand, 53066375 - 53066462
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctcta 473  Q
    ||||||||||||||||||||| ||||| |||||||||  ||||||  ||||||||||||||||||||||||||||||||||||| ||||    
T  53066375 tactccctccgtccctcaatagatgac-tagttgactctgacacacttaccaatgcatatgttttatctttgatatcttcaattatcta 53066462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 396 - 475
Target Start/End: Complemental strand, 32285426 - 32285347
Alignment:
Q  396 tccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||| | |||||||||||||  |||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  32285426 tccctcaatagacgacctagttgactctgacacacgtaccaatacatatgttttatctttgatatcttcaattctctact 32285347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 385 - 475
Target Start/End: Original strand, 28690516 - 28690606
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    ||||||||||||| |  | || ||||||||||||||| |||||||  |||||||||||||||||||||||||||||||||||| |||||||    
T  28690516 tactccctccgtcacatattagatgacctagttgactccgacacacataccaatgcatatgttttatctttgatatcttcaatgctctact 28690606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 407 - 475
Target Start/End: Original strand, 9145524 - 9145592
Alignment:
Q  407 atgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| |||| ||||||    
T  9145524 atgacctagttgactccgacacacgtaccaatgcatatgttttatctttgatatcttgaattttctact 9145592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 385 - 475
Target Start/End: Complemental strand, 48707104 - 48707014
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||||||||| ||||| |||  ||||||| |  |||| |  ||||||||||||||||||||||||||||||||||||||||||||    
T  48707104 tactccctccgtccctaaataagtgatttagttgattctgacatacataccaatgcatatgttttatctttgatatcttcaattctctact 48707014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 385 - 471
Target Start/End: Complemental strand, 52668746 - 52668660
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctc 471  Q
    |||||||||||||||| ||||||||||||||||| ||  ||||||  || |||||||||| ||||||||||||||| ||||||||||    
T  52668746 tactccctccgtccctaaataaatgacctagttggctctgacacacatatcaatgcatatattttatctttgatattttcaattctc 52668660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 407 - 475
Target Start/End: Complemental strand, 7671552 - 7671484
Alignment:
Q  407 atgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    ||||||||||||| |  ||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  7671552 atgacctagttgattcagacgcatgtatcaatgcatatgttttatctttgatatcttcaattctctact 7671484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 413 - 472
Target Start/End: Original strand, 45093748 - 45093807
Alignment:
Q  413 tagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctct 472  Q
    |||||||||  |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  45093748 tagttgactctgacacacgtaccaatgcatatgttttatctttgatatcttcaattctct 45093807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 390 - 475
Target Start/End: Original strand, 47638060 - 47638145
Alignment:
Q  390 cctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||| ||||||| ||||| || |||| |  || ||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  47638060 cctccgtcactcaatagatgacttaattgattctgatacacgtaccaatgcatatgttttatctttaatatcttcaattctctact 47638145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 393 - 475
Target Start/End: Original strand, 10437290 - 10437372
Alignment:
Q  393 ccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||| ||||| || ||||| |||||||||  |||||| ||||||||  |||||||||||||||||||||||||||||| ||||    
T  10437290 ccgttcctcagtagatgacttagttgactctgacacacgtaccaatttatatgttttatctttgatatcttcaattctttact 10437372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 413 - 475
Target Start/End: Complemental strand, 35718088 - 35718026
Alignment:
Q  413 tagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||  |||||| |||||||||||||||||||||| ||||||||||||||| ||||||    
T  35718088 tagttgactctgacacacgtaccaatgcatatgttttatccttgatatcttcaattttctact 35718026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 407 - 473
Target Start/End: Original strand, 36665041 - 36665107
Alignment:
Q  407 atgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctcta 473  Q
    ||||| || |||||| ||| ||| ||||||||||||||||||||||||||||||||||| |||||||    
T  36665041 atgacttaattgactccgatacacgtaccaatgcatatgttttatctttgatatcttcatttctcta 36665107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 385 - 465
Target Start/End: Complemental strand, 52550877 - 52550797
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttca 465  Q
    ||||| |||||||||  | || ||||| ||||||||| ||||| | |||| ||||||||||||||||||| ||||||||||    
T  52550877 tactctctccgtcccatattagatgacttagttgactccgacatacgtactaatgcatatgttttatcttcgatatcttca 52550797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 385 - 420
Target Start/End: Complemental strand, 10435380 - 10435345
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgac 420  Q
    ||||||||||||||||||||||||||||||||||||    
T  10435380 tactccctccgtccctcaataaatgacctagttgac 10435345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 385 - 453
Target Start/End: Complemental strand, 39435296 - 39435228
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatct 453  Q
    |||||||||||||||| | || ||||||||||||| |  ||||||| ||||||| ||||| ||||||||    
T  39435296 tactccctccgtcccttattagatgacctagttgattctgacacatataccaatacatattttttatct 39435228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 420
Target Start/End: Original strand, 4238494 - 4238529
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgac 420  Q
    ||||||||||||||||||||||||||| ||||||||    
T  4238494 tactccctccgtccctcaataaatgacttagttgac 4238529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 420
Target Start/End: Original strand, 7459820 - 7459855
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgac 420  Q
    |||||||||||||||| |||||||||||||||||||    
T  7459820 tactccctccgtcccttaataaatgacctagttgac 7459855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 420
Target Start/End: Original strand, 8559005 - 8559040
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgac 420  Q
    |||||||||||||||| |||||||||||||||||||    
T  8559005 tactccctccgtcccttaataaatgacctagttgac 8559040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 420
Target Start/End: Complemental strand, 18659313 - 18659278
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgac 420  Q
    |||||||||||||||| |||||||||||||||||||    
T  18659313 tactccctccgtcccttaataaatgacctagttgac 18659278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 420
Target Start/End: Original strand, 32951136 - 32951171
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgac 420  Q
    |||||||||||||||||||||||||| |||||||||    
T  32951136 tactccctccgtccctcaataaatgatctagttgac 32951171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 420
Target Start/End: Complemental strand, 34827514 - 34827479
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgac 420  Q
    |||||||||||||||| |||||||||||||||||||    
T  34827514 tactccctccgtcccttaataaatgacctagttgac 34827479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 404 - 475
Target Start/End: Original strand, 48143784 - 48143854
Alignment:
Q  404 taaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    ||||||| |||||||||| ||||||   ||||||| |||||| |||||||||||||| ||||||||| ||||    
T  48143784 taaatgatctagttgactccgacactcataccaatacatatggtttatctttgatat-ttcaattctgtact 48143854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 385 - 417
Target Start/End: Complemental strand, 37833161 - 37833129
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagtt 417  Q
    |||||||||||||||| ||||||||||||||||    
T  37833161 tactccctccgtcccttaataaatgacctagtt 37833129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 82; Significance: 2e-38; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 385 - 474
Target Start/End: Original strand, 33121542 - 33121631
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctac 474  Q
    |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  33121542 tactccctccgtcccttaataaatgacctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctac 33121631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 385 - 475
Target Start/End: Complemental strand, 643692 - 643602
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||||||||| ||||||||||||||||||||  ||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  643692 tactccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctact 643602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 385 - 475
Target Start/End: Original strand, 11114565 - 11114655
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    ||||||||||||||||||||||||||||||||||| |  ||||||  ||||||||||||||||||||||||||||||||| ||||||||||    
T  11114565 tactccctccgtccctcaataaatgacctagttgattctgacacacataccaatgcatatgttttatctttgatatcttcgattctctact 11114655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 385 - 475
Target Start/End: Original strand, 25435412 - 25435501
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||||| ||||||||||||| ||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  25435412 tactccctccgttcctcaataaatgatctagttgactt-gacacacataccaatgcatatgttttatctttgatatcttcaattctctact 25435501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 385 - 475
Target Start/End: Original strand, 30237165 - 30237256
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatg-ttttatctttgatatcttcaattctctact 475  Q
    ||||||||||||||||||||| |||||||||||||||  |||||| ||||||||||||||| ||||||||||||||||||| ||||||||||    
T  30237165 tactccctccgtccctcaatagatgacctagttgactctgacacacgtaccaatgcatatgtttttatctttgatatcttcgattctctact 30237256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 385 - 475
Target Start/End: Original strand, 18991904 - 18991994
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||||||||| ||||| ||||||||||||||  |||||| ||||||||||||||||||||| |||||||||||||||| ||||||    
T  18991904 tactccctccgtccctgaataagtgacctagttgactctgacacacgtaccaatgcatatgttttatttttgatatcttcaattttctact 18991994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 377 - 473
Target Start/End: Original strand, 22020268 - 22020364
Alignment:
Q  377 ttaattactactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctcta 473  Q
    |||| ||||||||| ||||| | | ||||||||||||||||||||  ||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  22020268 ttaaatactactccttccgttcttaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctcta 22020364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 385 - 473
Target Start/End: Original strand, 31854818 - 31854906
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctcta 473  Q
    |||||||||||||||| ||||||||||| ||||||||  || |||  ||||||||||||||||||||||||||||||||||||||||||    
T  31854818 tactccctccgtccctaaataaatgacccagttgactctgatacacataccaatgcatatgttttatctttgatatcttcaattctcta 31854906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 385 - 475
Target Start/End: Original strand, 24150741 - 24150831
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||| ||||| ||| ||||||||||||||||||||  ||||||  ||||||||||||| ||||||||||||||||||||||||||||||    
T  24150741 tactccatccgttcctaaataaatgacctagttgactctgacacacataccaatgcatatattttatctttgatatcttcaattctctact 24150831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 385 - 474
Target Start/End: Complemental strand, 13207214 - 13207125
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctac 474  Q
    ||||| ||||||||  || || |||||||||||||||  |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  13207214 tactctctccgtcctacattagatgacctagttgactctgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctac 13207125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 404 - 472
Target Start/End: Original strand, 25163183 - 25163251
Alignment:
Q  404 taaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctct 472  Q
    ||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  25163183 taaatgatctagttgatttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctct 25163251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 385 - 475
Target Start/End: Original strand, 29403644 - 29403734
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    ||||| |||||||| | |||||||||| |||||||||  ||||||  ||||||||| ||||||||||||||||||||||||||||||||||    
T  29403644 tactctctccgtcctttaataaatgacttagttgactctgacacacataccaatgcgtatgttttatctttgatatcttcaattctctact 29403734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 385 - 475
Target Start/End: Complemental strand, 20662321 - 20662230
Alignment:
Q  385 tactccctccgtccctcaa-taaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||| |||||||||||||| ||||||||||||||| ||  |||| |  |||||||||||||||||||||||| |||||||||||||||||||    
T  20662321 tacttcctccgtccctcaaataaatgacctagttgcctctgacatacataccaatgcatatgttttatctttaatatcttcaattctctact 20662230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 385 - 475
Target Start/End: Original strand, 8796050 - 8796140
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    ||||| |||||||||| ||||||| | ||||||||||  ||||||  |||||||| ||||||||||||||||||||||| |||||||||||    
T  8796050 tactcactccgtccctaaataaatcatctagttgactctgacacacataccaatgtatatgttttatctttgatatctttaattctctact 8796140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 385 - 475
Target Start/End: Complemental strand, 7098130 - 7098044
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    ||||||||||||||||    |||||| ||||||||||  ||||||  ||||||||||||||||||||||||||||||||||||| ||||||    
T  7098130 tactccctccgtccct----aaatgatctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattttctact 7098044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 410 - 475
Target Start/End: Complemental strand, 29986394 - 29986329
Alignment:
Q  410 acctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    ||||||||||||  ||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  29986394 acctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctact 29986329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 407 - 475
Target Start/End: Complemental strand, 19069007 - 19068939
Alignment:
Q  407 atgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    ||||| ||||| ||| ||| ||| |||||||| ||||| |||||||||||||||||||| |||||||||    
T  19069007 atgacttagttaactccgatacacgtaccaatacatatattttatctttgatatcttcagttctctact 19068939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 378 - 420
Target Start/End: Original strand, 29979017 - 29979059
Alignment:
Q  378 taattactactccctccgtccctcaataaatgacctagttgac 420  Q
    |||||| |||||||||||||||| |||||||||||||||||||    
T  29979017 taattagtactccctccgtcccttaataaatgacctagttgac 29979059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 420
Target Start/End: Original strand, 16696016 - 16696051
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgac 420  Q
    ||||||||||||||||||||| ||||||||||||||    
T  16696016 tactccctccgtccctcaatagatgacctagttgac 16696051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 420
Target Start/End: Original strand, 20662059 - 20662094
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgac 420  Q
    |||||||||||||||| |||||||||||||||||||    
T  20662059 tactccctccgtcccttaataaatgacctagttgac 20662094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 420
Target Start/End: Complemental strand, 25163425 - 25163390
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgac 420  Q
    ||||||||||||||||||||||||||| ||||||||    
T  25163425 tactccctccgtccctcaataaatgacatagttgac 25163390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 385 - 473
Target Start/End: Complemental strand, 16434789 - 16434701
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctcta 473  Q
    |||||||||||||||  | || |||| ||||||||||  |||||   ||||||||||||| | |||||||| ||||||| |||| ||||    
T  16434789 tactccctccgtcccatattagatgaactagttgactcagacactcataccaatgcatatttcttatctttaatatctttaattatcta 16434701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 377 - 421
Target Start/End: Complemental strand, 24825434 - 24825390
Alignment:
Q  377 ttaattactactccctccgtccctcaataaatgacctagttgact 421  Q
    |||||||||||||||||||||||| ||||| ||| | ||||||||    
T  24825434 ttaattactactccctccgtcccttaataagtgatccagttgact 24825390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 82; Significance: 2e-38; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 386 - 475
Target Start/End: Complemental strand, 41463777 - 41463688
Alignment:
Q  386 actccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  41463777 actccctccgtccctcaataaatgacctagttgactccgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctact 41463688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 385 - 475
Target Start/End: Complemental strand, 7443152 - 7443062
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||||||||| ||||| ||||||||||||||  |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  7443152 tactccctccgtccctgaataagtgacctagttgactctgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctact 7443062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 385 - 475
Target Start/End: Original strand, 14372077 - 14372167
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||||||||| ||||||||||||||||||||  ||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  14372077 tactccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctact 14372167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 385 - 475
Target Start/End: Original strand, 23671376 - 23671466
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||||||||| ||||||||||||||||||||  ||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  23671376 tactccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctact 23671466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 385 - 475
Target Start/End: Original strand, 30708728 - 30708818
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    ||||||||||||| || ||||| ||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  30708728 tactccctccgtctctgaataagtgacctagttgactttgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctact 30708818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 385 - 474
Target Start/End: Complemental strand, 32776161 - 32776072
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctac 474  Q
    |||||||||||||||| |||| ||||||||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  32776161 tactccctccgtcccttaatagatgacctagttgactccgatacacgtaccaatgcatatgttttatctttgatatcttcaattctctac 32776072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 385 - 473
Target Start/End: Original strand, 40598128 - 40598216
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctcta 473  Q
    |||||||||||||||  | ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  40598128 tactccctccgtcccatattaaatgatctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctcta 40598216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 385 - 475
Target Start/End: Original strand, 18718239 - 18718329
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||||||||| ||||||||||||||||||||  ||||||  || |||||||||||||||||||||||||||||||||||||||||    
T  18718239 tactccctccgtccctaaataaatgacctagttgactctgacacacatatcaatgcatatgttttatctttgatatcttcaattctctact 18718329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 385 - 475
Target Start/End: Complemental strand, 40425510 - 40425420
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||||||||| |||||||||||||||||| |  ||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  40425510 tactccctccgtccctaaataaatgacctagttgattctgacacacataccaatgcatatgttttatctttgatatcttcaattctctact 40425420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 385 - 475
Target Start/End: Original strand, 42038523 - 42038613
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||||||||| ||||| ||||||||||||||  ||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  42038523 tactccctccgtccctaaataagtgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctact 42038613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 385 - 474
Target Start/End: Original strand, 38963519 - 38963608
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctac 474  Q
    |||||||||||| ||| |||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  38963519 tactccctccgttccttaatagatgacctagttaacttcgacacacgtaccaatgcatatgttttatctttgatttcttcaattctctac 38963608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 385 - 473
Target Start/End: Original strand, 34826912 - 34827000
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctcta 473  Q
    |||||||||||||||| ||||||||||||||||||||  ||||||  ||| ||||||||||||||||||||||||||||||||||||||    
T  34826912 tactccctccgtccctaaataaatgacctagttgactctgacacacatactaatgcatatgttttatctttgatatcttcaattctcta 34827000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 388 - 475
Target Start/End: Complemental strand, 14707792 - 14707705
Alignment:
Q  388 tccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    ||||||||||||| ||||||||||||||||||||  ||||||  ||||||||||||||||||||||||||||||||||||||| ||||    
T  14707792 tccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctttact 14707705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 385 - 475
Target Start/End: Complemental strand, 3987493 - 3987403
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||||||||| ||||||||| ||||||||||  ||||||  ||||||| ||||||||||||||||||||||||||||||||||||    
T  3987493 tactccctccgtccctaaataaatgatctagttgactctgacacacataccaatacatatgttttatctttgatatcttcaattctctact 3987403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 385 - 475
Target Start/End: Complemental strand, 41173018 - 41172928
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||||||||| ||||||||||||| ||||||  ||||||  ||||||||||||||||||||||||||||||||||||| ||||||    
T  41173018 tactccctccgtccctaaataaatgacctacttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattttctact 41172928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 377 - 473
Target Start/End: Original strand, 44330376 - 44330472
Alignment:
Q  377 ttaattactactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctcta 473  Q
    |||| ||||||||| ||||| | | ||||||||||||||||||||  ||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  44330376 ttaaatactactccttccgttcttaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctcta 44330472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 385 - 475
Target Start/End: Complemental strand, 9877344 - 9877254
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    ||||||||||||||||||||| |||||||||||||||  |||||| ||   |||||||||||||||||||||||||||| |||||||||||    
T  9877344 tactccctccgtccctcaatagatgacctagttgactctgacacacgtgtgaatgcatatgttttatctttgatatctttaattctctact 9877254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 385 - 475
Target Start/End: Original strand, 20517419 - 20517509
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    ||||||||||||| || |||||||||| || ||||||  ||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  20517419 tactccctccgtctctaaataaatgacataattgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctact 20517509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 385 - 475
Target Start/End: Complemental strand, 44283540 - 44283450
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||||||| | |||||||||||||||||| |  ||||||  ||||||||||||| ||||||||||||||||||||||||||||||    
T  44283540 tactccctccgtccttaaataaatgacctagttgattctgacacacataccaatgcatatattttatctttgatatcttcaattctctact 44283450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 385 - 473
Target Start/End: Complemental strand, 4045494 - 4045406
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctcta 473  Q
    |||||||||||||||| |||||||||  | |||||||  ||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  4045494 tactccctccgtccctaaataaatgatttggttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctcta 4045406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 385 - 473
Target Start/End: Original strand, 27559575 - 27559663
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctcta 473  Q
    |||||||||||||||| ||||||||| ||||||||||  ||||||  || ||||| |||||||||||||||||||||||||||||||||    
T  27559575 tactccctccgtccctaaataaatgatctagttgactctgacacacatatcaatgtatatgttttatctttgatatcttcaattctcta 27559663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 385 - 475
Target Start/End: Complemental strand, 16942072 - 16941982
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||| |||||||| || ||||||||| ||||||||||  ||||||  ||||||||||||||||||||||||||||| ||||||||||||||    
T  16942072 tacttcctccgtcgctaaataaatgatctagttgactctgacacacataccaatgcatatgttttatctttgatatattcaattctctact 16941982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 385 - 475
Target Start/End: Complemental strand, 17012737 - 17012647
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||| |||||||| || ||||||||| ||||||||||  ||||||  ||||||||||||||||||||||||||||| ||||||||||||||    
T  17012737 tacttcctccgtcgctaaataaatgatctagttgactctgacacacataccaatgcatatgttttatctttgatatattcaattctctact 17012647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 394 - 475
Target Start/End: Complemental strand, 24283210 - 24283129
Alignment:
Q  394 cgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||||| ||||||||||||  | ||||||| ||||  |||||||||||||||||||||||||||||||||||||||    
T  24283210 cgtccctcaatagatgacctagttgtttccgacacacgtactgatgcatatgttttatctttgatatcttcaattctctact 24283129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 385 - 475
Target Start/End: Original strand, 332278 - 332366
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||||||||  | || |||||||| |||||| ||||||  ||||||| |||||||||||||||||||||||||||||||||||||    
T  332278 tactccctccgtcccatattagatgacctatttgactccgacac--gtaccaacgcatatgttttatctttgatatcttcaattctctact 332366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 385 - 475
Target Start/End: Complemental strand, 39418281 - 39418191
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||| | |||||| | |||| ||||||||||||||||||  ||||||| ||||| ||||||||||||||||||||||| ||||||    
T  39418281 tactccctcctttcctcaacagatgatctagttgacttcgacacacttaccaatacatatattttatctttgatatcttcaattatctact 39418191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 407 - 475
Target Start/End: Complemental strand, 38137769 - 38137701
Alignment:
Q  407 atgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||| |||||||||| ||||||| |||| |||||||||||||||||||||||||||||||||| |||||    
T  38137769 atgatctagttgactccgacacacgtacaaatgcatatgttttatctttgatatcttcaattccctact 38137701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 407 - 475
Target Start/End: Original strand, 40898662 - 40898730
Alignment:
Q  407 atgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||| |||||||||| ||||||| |||| |||| |||||||||||||||||||||||||||||||||||    
T  40898662 atgatctagttgactccgacacacgtactaatgtatatgttttatctttgatatcttcaattctctact 40898730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 402 - 475
Target Start/End: Complemental strand, 36199195 - 36199122
Alignment:
Q  402 aataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    ||||||||| ||||||||||  ||||||  ||| ||||||||||||||||||||||||||||| ||||||||||    
T  36199195 aataaatgatctagttgactctgacacacatactaatgcatatgttttatctttgatatcttcgattctctact 36199122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 383 - 463
Target Start/End: Complemental strand, 38588152 - 38588072
Alignment:
Q  383 actactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatctt 463  Q
    |||||| | ||||||||| ||||||||| ||||||||||  || |||  ||||||||||||||||||||||||||||||||    
T  38588152 actacttcatccgtccctaaataaatgatctagttgactctgatacacataccaatgcatatgttttatctttgatatctt 38588072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 434 - 475
Target Start/End: Complemental strand, 30776405 - 30776364
Alignment:
Q  434 ccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  30776405 ccaatgcatatgttttatctttgatatcttcaattctctact 30776364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 407 - 475
Target Start/End: Complemental strand, 13399344 - 13399276
Alignment:
Q  407 atgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    ||||| |||||||||  || ||||||||||||||||| ||||||| ||| |||||||||||||||||||    
T  13399344 atgacttagttgactctgatacatgtaccaatgcatacgttttattttttatatcttcaattctctact 13399276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 385 - 475
Target Start/End: Original strand, 4045850 - 4045940
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||| | |||||||| ||||  ||||||| |  |||| | |||| |||||||||||||||||||||||||||| |||| ||||||    
T  4045850 tactccctccattcctcaatagatgatttagttgattctgacatacgtactaatgcatatgttttatctttgatatctttaattttctact 4045940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 436 - 473
Target Start/End: Complemental strand, 43925291 - 43925254
Alignment:
Q  436 aatgcatatgttttatctttgatatcttcaattctcta 473  Q
    ||||||||||||||||||||||||||||||||||||||    
T  43925291 aatgcatatgttttatctttgatatcttcaattctcta 43925254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 407 - 470
Target Start/End: Original strand, 4083229 - 4083292
Alignment:
Q  407 atgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattct 470  Q
    |||| |||||||||| |||||||  || ||||||||||||||||||||| ||||||| ||||||    
T  4083229 atgagctagttgactccgacacacatatcaatgcatatgttttatctttaatatctttaattct 4083292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 392 - 455
Target Start/End: Complemental strand, 5030525 - 5030462
Alignment:
Q  392 tccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatcttt 455  Q
    ||||||| | |||| |||||||||||||||| ||||||  ||||||||||||| ||||||||||    
T  5030525 tccgtccgttaatagatgacctagttgactttgacacacataccaatgcatattttttatcttt 5030462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 384 - 420
Target Start/End: Original strand, 14707534 - 14707570
Alignment:
Q  384 ctactccctccgtccctcaataaatgacctagttgac 420  Q
    ||||||||||||||||| |||||||||||||||||||    
T  14707534 ctactccctccgtcccttaataaatgacctagttgac 14707570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 407 - 475
Target Start/End: Original strand, 42951362 - 42951430
Alignment:
Q  407 atgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||| |||||||||| ||||||| ||| ||||| ||||||||||| |||||||| ||| ||||| ||||    
T  42951362 atgatctagttgactccgacacacgtatcaatgtatatgttttatttttgatattttctattctttact 42951430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 436 - 475
Target Start/End: Original strand, 7106329 - 7106368
Alignment:
Q  436 aatgcatatgttttatctttgatatcttcaattctctact 475  Q
    ||||||||||||||||||||| ||||||||||| ||||||    
T  7106329 aatgcatatgttttatctttgctatcttcaattatctact 7106368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 420
Target Start/End: Complemental strand, 18718500 - 18718465
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgac 420  Q
    |||||||||||||||| |||||||||||||||||||    
T  18718500 tactccctccgtcccttaataaatgacctagttgac 18718465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 420
Target Start/End: Complemental strand, 23671637 - 23671602
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgac 420  Q
    |||||||||||||||| |||||||||||||||||||    
T  23671637 tactccctccgtcccttaataaatgacctagttgac 23671602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 420
Target Start/End: Original strand, 40425249 - 40425284
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgac 420  Q
    |||||||||||||||| |||||||||||||||||||    
T  40425249 tactccctccgtcccttaataaatgacctagttgac 40425284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 385 - 419
Target Start/End: Original strand, 20917729 - 20917763
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttga 419  Q
    |||||||||||||||| ||||||||||||||||||    
T  20917729 tactccctccgtcccttaataaatgacctagttga 20917763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 420
Target Start/End: Original strand, 44283281 - 44283314
Alignment:
Q  387 ctccctccgtccctcaataaatgacctagttgac 420  Q
    |||||||||||||| |||||||||||||||||||    
T  44283281 ctccctccgtcccttaataaatgacctagttgac 44283314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 379 - 411
Target Start/End: Original strand, 4137404 - 4137436
Alignment:
Q  379 aattactactccctccgtccctcaataaatgac 411  Q
    ||||||||||||||||||||| |||||||||||    
T  4137404 aattactactccctccgtcccgcaataaatgac 4137436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 82; Significance: 2e-38; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 385 - 474
Target Start/End: Complemental strand, 23569935 - 23569846
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctac 474  Q
    |||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  23569935 tactccctccgtccctcaataaatgatctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctac 23569846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 381 - 475
Target Start/End: Complemental strand, 48219907 - 48219813
Alignment:
Q  381 ttactactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||||||||||||| ||||||||||||||||||||  ||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  48219907 ttactactccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctact 48219813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 385 - 475
Target Start/End: Original strand, 25531778 - 25531868
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||||||||| ||||||||||||||||||||  ||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  25531778 tactccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctact 25531868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 385 - 475
Target Start/End: Complemental strand, 30529311 - 30529221
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||||||||| ||||||||||||| ||||||    
T  30529311 tactccctccgtccctcaataaatgacctagttgactctgacacaagtaccaatgcatatgttttatcttagatatcttcaattttctact 30529221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 385 - 475
Target Start/End: Original strand, 50876364 - 50876454
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||||||||| ||||||||||||||||||||   |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  50876364 tactccctccgtccctaaataaatgacctagttgactctaacacatataccaatgcatatgttttatctttgatatcttcaattctctact 50876454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 382 - 475
Target Start/End: Original strand, 52378986 - 52379079
Alignment:
Q  382 tactactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    ||||||||||||||||||| ||||||||| ||||||||||  ||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  52378986 tactactccctccgtccctaaataaatgatctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctact 52379079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 384 - 475
Target Start/End: Original strand, 38458728 - 38458819
Alignment:
Q  384 ctactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    ||||| |||||||||||||||||||||||||||||| |  ||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  38458728 ctacttcctccgtccctcaataaatgacctagttgattctgacacacataccaatgcatatgttttatctttgatatcttcaattctctact 38458819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 385 - 475
Target Start/End: Complemental strand, 39354525 - 39354435
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||| ||||||| ||||||||||||||||||||  ||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  39354525 tactccctacgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctact 39354435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 385 - 475
Target Start/End: Complemental strand, 48265072 - 48264982
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||||||||| ||||||||||||||||||||  ||||||  |||||||||||||||||||||||| |||||||||||||||||||    
T  48265072 tactccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttaatatcttcaattctctact 48264982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 385 - 475
Target Start/End: Original strand, 50539260 - 50539350
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||||||||| ||||||||| ||||||||||  ||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  50539260 tactccctccgtccctaaataaatgatctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctact 50539350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 388 - 473
Target Start/End: Original strand, 16266165 - 16266250
Alignment:
Q  388 tccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctcta 473  Q
    ||||||||||||  | ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  16266165 tccctccgtcccatattaaatgatctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctcta 16266250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 385 - 473
Target Start/End: Original strand, 16265033 - 16265121
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctcta 473  Q
    ||||||||||||| |  | ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  16265033 tactccctccgtctcatattaaatgatctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctcta 16265121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 385 - 473
Target Start/End: Original strand, 26441637 - 26441725
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctcta 473  Q
    |||||||||||| ||  | ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  26441637 tactccctccgttccatattaaatgatctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctcta 26441725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 385 - 473
Target Start/End: Complemental strand, 32988610 - 32988522
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctcta 473  Q
    ||||||||||||| || ||||||||||||||||||||  ||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  32988610 tactccctccgtctctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctcta 32988522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 385 - 473
Target Start/End: Original strand, 43680069 - 43680157
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctcta 473  Q
    |||||||||||||||  | ||||||| |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  43680069 tactccctccgtcccatattaaatgatctagttgacttcgacacgcgtaccaatgcatatgttttatctttgatatcttcaattctcta 43680157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 385 - 475
Target Start/End: Original strand, 3529176 - 3529266
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||||||||| ||| ||||| ||||||||||  |||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  3529176 tactccctccgtcccttaattaatgatctagttgactctgacacacgtaccaatgcatatgttttatctttgatatattcaattctctact 3529266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 385 - 475
Target Start/End: Original strand, 32565746 - 32565836
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||||||| |||||| ||||| |||||||||  |||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  32565746 tactccctccgtccttcaatagatgacttagttgactctgacacacgtaccaatgcatatgttttctctttgatatcttcaattctctact 32565836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 385 - 473
Target Start/End: Complemental strand, 3898832 - 3898744
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctcta 473  Q
    |||||||||||||||  | ||||||| |||||||||||||||| | |||||||||||||||||||||||||||||||||||||| ||||    
T  3898832 tactccctccgtcccatattaaatgatctagttgacttcgacagacgtaccaatgcatatgttttatctttgatatcttcaattttcta 3898744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 385 - 473
Target Start/End: Original strand, 24982351 - 24982439
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctcta 473  Q
    ||||||||||||| |  | ||||||| |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  24982351 tactccctccgtctcatattaaatgatctagttgacttcgacacacgtaccaatgcatatgttttatatttgatatcttcaattctcta 24982439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 404 - 475
Target Start/End: Original strand, 47222233 - 47222304
Alignment:
Q  404 taaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  47222233 taaatgacctagttgactccgacacacgtaccaatgcatatgttttatctttgatatcttcaattctttact 47222304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 384 - 471
Target Start/End: Original strand, 48376157 - 48376244
Alignment:
Q  384 ctactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctc 471  Q
    |||||||||| || | |||||| ||||||||||| |||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  48376157 ctactccctctgttcttcaatagatgacctagttaactttgacacacgtaccaatgcatatgttttatctttgatatcttcaattctc 48376244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 385 - 500
Target Start/End: Original strand, 50481278 - 50481393
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctactnnnnnnntt 484  Q
    |||||||||||||||  | || ||||| ||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||||| |       ||    
T  50481278 tactccctccgtcccatattagatgacttagttgattccgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctattaaaaaaatt 50481377  T
Q  485 atgaaaatttaatatt 500  Q
    ||||||||||||||||    
T  50481378 atgaaaatttaatatt 50481393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 389 - 470
Target Start/End: Original strand, 4605002 - 4605083
Alignment:
Q  389 ccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattct 470  Q
    ||||||||||||| ||| |||| |||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  4605002 ccctccgtccctcgatagatgatctagttgactccgacacacgtaccaatgcatatgttttatctttgatatctttaattct 4605083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 384 - 472
Target Start/End: Complemental strand, 16751715 - 16751627
Alignment:
Q  384 ctactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctct 472  Q
    ||||||||||||| ||  | || ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  16751715 ctactccctccgttccatattagatgacctagttgactccgacacacgtaccaatgcatatgttttatctttgatatctttaattctct 16751627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 386 - 470
Target Start/End: Complemental strand, 49805512 - 49805428
Alignment:
Q  386 actccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattct 470  Q
    ||||||||||||||| ||||||||| ||||||||||  |||| |  |||||||||||||||||||||||||||||||||||||||    
T  49805512 actccctccgtccctaaataaatgatctagttgactctgacaaacataccaatgcatatgttttatctttgatatcttcaattct 49805428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 396 - 475
Target Start/End: Original strand, 29161853 - 29161932
Alignment:
Q  396 tccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    ||||||||||||||| ||||||||||  |||||| |||||||| ||||||||||||||||||||||||||||| ||||||    
T  29161853 tccctcaataaatgatctagttgactctgacacacgtaccaattcatatgttttatctttgatatcttcaattttctact 29161932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 390 - 475
Target Start/End: Complemental strand, 45235101 - 45235016
Alignment:
Q  390 cctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||| || ||||| |||| |||||||||  |||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  45235101 cctccgtctctgaataagtgacttagttgactctgacacacgtaccaatgcatatgttttatctttgatatcttcaattctttact 45235016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 407 - 471
Target Start/End: Complemental strand, 38738217 - 38738153
Alignment:
Q  407 atgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctc 471  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  38738217 atgacctagttgactccgacacacgtaccaatgcatatgttttatctttgatatgttcaattctc 38738153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 381 - 475
Target Start/End: Original strand, 42708500 - 42708594
Alignment:
Q  381 ttactactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||| ||||| | | |||||||||  |||||||||  ||||||  |||||||||||||||||||| |||||||||||||||||||||||    
T  42708500 ttactactccttccgttcttaaataaatgatttagttgactctgacacacataccaatgcatatgttttatatttgatatcttcaattctctact 42708594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 402 - 475
Target Start/End: Complemental strand, 31971631 - 31971558
Alignment:
Q  402 aataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||| |||| ||||||||||  ||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  31971631 aatagatgatctagttgactctgacacatgtaccaatgcatatgttttatctttgatatattcaactctctact 31971558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 385 - 475
Target Start/End: Original strand, 37281092 - 37281182
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    ||||||||  ||||||||||| |||||||||||||||  |||| |  ||| ||||||| |||||||||||| |||||||||||||||||||    
T  37281092 tactccctttgtccctcaatagatgacctagttgactctgacaaacatacaaatgcatgtgttttatcttttatatcttcaattctctact 37281182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 402 - 475
Target Start/End: Original strand, 1849716 - 1849789
Alignment:
Q  402 aataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    ||||| ||| ||||||||||   |||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  1849716 aataagtgatctagttgactctaacacatataccaatgcatatgttttatctttgatatcttcaattctatact 1849789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 382 - 500
Target Start/End: Original strand, 14075732 - 14075850
Alignment:
Q  382 tactactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctactnnnnnn 481  Q
    ||||| ||||||||||||  | || |||| | |||||||| |||||||  |||||||||||||||||||| |||||||||||||||| | ||||          
T  14075732 tactattccctccgtcccatattagatgatcgagttgactccgacacacataccaatgcatatgttttatatttgatatcttcaattatttactaaaaaa 14075831  T
Q  482 nttatgaaaatttaatatt 500  Q
     ||||||||||||||||||    
T  14075832 attatgaaaatttaatatt 14075850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 407 - 473
Target Start/End: Original strand, 23330474 - 23330540
Alignment:
Q  407 atgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctcta 473  Q
    |||| |||||||| | ||||| ||||| ||||||||||||||||||||| |||||||||||||||||    
T  23330474 atgatctagttgattccgacatatgtatcaatgcatatgttttatctttcatatcttcaattctcta 23330540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 426 - 475
Target Start/End: Complemental strand, 41501828 - 41501779
Alignment:
Q  426 cacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  41501828 cacacgtaccaatgcatatgttttatctttgatatattcaattctctact 41501779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 415 - 473
Target Start/End: Complemental strand, 21034761 - 21034703
Alignment:
Q  415 gttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctcta 473  Q
    |||||||| ||||||||||| || | ||||||||||||||||||||||| |||||||||    
T  21034761 gttgactttgacacatgtactaaggtatatgttttatctttgatatctttaattctcta 21034703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 385 - 420
Target Start/End: Original strand, 3898571 - 3898606
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgac 420  Q
    ||||||||||||||||||||||||||||||||||||    
T  3898571 tactccctccgtccctcaataaatgacctagttgac 3898606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 385 - 420
Target Start/End: Complemental strand, 16265294 - 16265259
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgac 420  Q
    ||||||||||||||||||||||||||||||||||||    
T  16265294 tactccctccgtccctcaataaatgacctagttgac 16265259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 385 - 420
Target Start/End: Complemental strand, 16266423 - 16266388
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgac 420  Q
    ||||||||||||||||||||||||||||||||||||    
T  16266423 tactccctccgtccctcaataaatgacctagttgac 16266388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 385 - 420
Target Start/End: Complemental strand, 26441895 - 26441860
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgac 420  Q
    ||||||||||||||||||||||||||||||||||||    
T  26441895 tactccctccgtccctcaataaatgacctagttgac 26441860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 385 - 420
Target Start/End: Complemental strand, 43680331 - 43680296
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgac 420  Q
    ||||||||||||||||||||||||||||||||||||    
T  43680331 tactccctccgtccctcaataaatgacctagttgac 43680296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 383 - 420
Target Start/End: Original strand, 39354262 - 39354299
Alignment:
Q  383 actactccctccgtccctcaataaatgacctagttgac 420  Q
    |||||||||||||||||| |||||||||||||||||||    
T  39354262 actactccctccgtcccttaataaatgacctagttgac 39354299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 379 - 419
Target Start/End: Complemental strand, 5606465 - 5606425
Alignment:
Q  379 aattactactccctccgtccctcaataaatgacctagttga 419  Q
    ||||||||||||||||||||| |||||||||||||| ||||    
T  5606465 aattactactccctccgtcccgcaataaatgacctatttga 5606425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 420
Target Start/End: Complemental strand, 24982612 - 24982577
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgac 420  Q
    ||||||||||||||||||||||||||||| ||||||    
T  24982612 tactccctccgtccctcaataaatgaccttgttgac 24982577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 420
Target Start/End: Complemental strand, 25532039 - 25532004
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgac 420  Q
    |||||||||||||||| |||||||||||||||||||    
T  25532039 tactccctccgtcccttaataaatgacctagttgac 25532004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 420
Target Start/End: Original strand, 30529050 - 30529085
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgac 420  Q
    |||||||||||||||| |||||||||||||||||||    
T  30529050 tactccctccgtcccttaataaatgacctagttgac 30529085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 420
Target Start/End: Original strand, 48264811 - 48264846
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgac 420  Q
    |||||||||||||||| |||||||||||||||||||    
T  48264811 tactccctccgtcccttaataaatgacctagttgac 48264846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 420
Target Start/End: Complemental strand, 50876625 - 50876590
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgac 420  Q
    |||||||||||||||| |||||||||||||||||||    
T  50876625 tactccctccgtcccttaataaatgacctagttgac 50876590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 443 - 500
Target Start/End: Original strand, 23340849 - 23340906
Alignment:
Q  443 atgttttatctttgatatcttcaattctctactnnnnnnnttatgaaaatttaatatt 500  Q
    |||||||||| ||||||||||||||||| ||||       ||||||||||||||||||    
T  23340849 atgttttatcgttgatatcttcaattctatactaaaaaaattatgaaaatttaatatt 23340906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 382 - 414
Target Start/End: Original strand, 44240516 - 44240548
Alignment:
Q  382 tactactccctccgtccctcaataaatgaccta 414  Q
    |||||||||||||||||| ||||||||||||||    
T  44240516 tactactccctccgtcccgcaataaatgaccta 44240548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 385 - 475
Target Start/End: Complemental strand, 41478 - 41388
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||||||||||||||||||||||||||||||  ||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  41478 tactccctccgtccctcaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctact 41388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 74; Significance: 1e-33; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 382 - 475
Target Start/End: Complemental strand, 34478275 - 34478182
Alignment:
Q  382 tactactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    ||||||||||||||||||  | ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  34478275 tactactccctccgtcccatattaaataacctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctact 34478182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 382 - 475
Target Start/End: Original strand, 36819693 - 36819786
Alignment:
Q  382 tactactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    ||||||||||||||||||| ||||||||||||||||||||  ||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  36819693 tactactccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctact 36819786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 385 - 475
Target Start/End: Original strand, 2400285 - 2400375
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||||||||| ||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  2400285 tactccctccgtccctaaataaatgacctagttgactctgacacatataccaatgcatatgttttatctttgatatcttccattctctact 2400375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 365 - 475
Target Start/End: Original strand, 19072749 - 19072859
Alignment:
Q  365 ataataatattgttaattactactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttc 464  Q
    ||||| |||||  |||||| |||||||||||||||| |||||||||||||||||| |  ||||||  |||||||||||||||||||||||||||||||||    
T  19072749 ataattatatttgtaattattactccctccgtccctaaataaatgacctagttgattctgacacacataccaatgcatatgttttatctttgatatcttc 19072848  T
Q  465 aattctctact 475  Q
    |||||||||||    
T  19072849 aattctctact 19072859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 382 - 475
Target Start/End: Complemental strand, 31466622 - 31466529
Alignment:
Q  382 tactactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    ||||||||||||||||||| ||||| ||||||||||||||  |||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  31466622 tactactccctccgtccctaaataagtgacctagttgactctgacacacgtaccaatgcatatgttttatctttgatatcttcaattctatact 31466529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 385 - 473
Target Start/End: Complemental strand, 37231825 - 37231737
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctcta 473  Q
    |||||||||||||||  | ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  37231825 tactccctccgtcccatattaaatgatctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctcta 37231737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 385 - 475
Target Start/End: Complemental strand, 42086899 - 42086809
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||| ||||| ||||||||||||||||||||  ||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  42086899 tactccctccatccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctact 42086809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 385 - 473
Target Start/End: Complemental strand, 35501008 - 35500920
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctcta 473  Q
    |||||||||||||||  | ||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  35501008 tactccctccgtcccatattaaatgatctagttaacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctcta 35500920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 384 - 475
Target Start/End: Complemental strand, 23474231 - 23474140
Alignment:
Q  384 ctactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    ||||||| ||||||||| ||||| ||||||||||||||  |||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  23474231 ctactccttccgtccctaaataagtgacctagttgactctgacacacgtatcaatgcatatgttttatctttgatatcttcaattctctact 23474140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 385 - 475
Target Start/End: Complemental strand, 28185669 - 28185579
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||||||||| ||||||||||||||||||||  ||||||  ||||||| |||||||||||||||||||||||| |||||||||||    
T  28185669 tactccctccgtccctaaataaatgacctagttgactctgacacacataccaatacatatgttttatctttgatatctttaattctctact 28185579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 385 - 475
Target Start/End: Complemental strand, 37951206 - 37951116
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||||||| | ||||||||||||||||||||  ||| ||  ||||||||||||||||||||||||||||||||||||||||||||    
T  37951206 tactccctccgtccataaataaatgacctagttgactctgacgcacataccaatgcatatgttttatctttgatatcttcaattctctact 37951116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 385 - 475
Target Start/End: Complemental strand, 44479981 - 44479891
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||| ||||||||||| ||||| ||||||||||||||  ||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  44479981 tacttcctccgtccctaaataagtgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctact 44479891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 385 - 475
Target Start/End: Original strand, 47080980 - 47081070
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||||||||| ||| ||||||||||||||||  ||||||  |||||||||||||||||||||||||||||||| |||||||||||    
T  47080980 tactccctccgtccctaaatgaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttaaattctctact 47081070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 385 - 475
Target Start/End: Complemental strand, 47713763 - 47713673
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||||||||| ||||| ||||||||||||||  ||||||  ||||||||||||||||||||||||||||||||||||| ||||||    
T  47713763 tactccctccgtccctaaataagtgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattttctact 47713673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 378 - 475
Target Start/End: Complemental strand, 42834560 - 42834463
Alignment:
Q  378 taattactactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||||||||||||| || ||||||||||||| ||||||| || |||  |||||||| |||||||||||||||||||||||||||||| ||||    
T  42834560 taattactactccctccgtctctaaataaatgacctatttgactttgatacacataccaatgtatatgttttatctttgatatcttcaattctttact 42834463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 385 - 473
Target Start/End: Complemental strand, 10464376 - 10464288
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctcta 473  Q
    |||||||||||||||  | |||||||  |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  10464376 tactccctccgtcccatattaaatgatatagttgactttgacacacgtaccaatgcatatgttttatctttgatatcttcaattctcta 10464288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 385 - 475
Target Start/End: Original strand, 21392018 - 21392108
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    ||||||||| |||| |||||| |||| ||||||||||  |||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  21392018 tactccctctgtccttcaatagatgatctagttgactctgacacacgtaccaatgcatatgttttatctttgatatctttaattctctact 21392108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 386 - 475
Target Start/End: Original strand, 31110625 - 31110712
Alignment:
Q  386 actccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    ||||||||||||||| ||||||||||||||||||||  ||||||| |  |||||||||||||||||||||||||| ||||||||||||||    
T  31110625 actccctccgtccctaaataaatgacctagttgactctgacacatct--caatgcatatgttttatctttgatattttcaattctctact 31110712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 385 - 475
Target Start/End: Complemental strand, 32619203 - 32619113
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||||||||| |||||||||| |||||||||  ||||||  || ||||||||||||||||| |||||||||||||||||||||||    
T  32619203 tactccctccgtccctaaataaatgacttagttgactctgacacacatatcaatgcatatgttttatttttgatatcttcaattctctact 32619113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 385 - 475
Target Start/End: Complemental strand, 36859469 - 36859379
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||||| ||| ||||||||||||| ||||||   |||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  36859469 tactccctccgttcctaaataaatgacctaattgactctaacacacataccaatgcatatgttttatctttgatatcttcaattctctact 36859379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 385 - 475
Target Start/End: Original strand, 36905526 - 36905616
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||||||||| |||||||||  |||||||||  ||||||  ||||||| ||||||||||||||||||||||||||||||||||||    
T  36905526 tactccctccgtccctaaataaatgatttagttgactctgacacacataccaatacatatgttttatctttgatatcttcaattctctact 36905616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 404 - 473
Target Start/End: Original strand, 36643181 - 36643250
Alignment:
Q  404 taaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctcta 473  Q
    ||||||| ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  36643181 taaatgatctaattgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctcta 36643250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 389 - 475
Target Start/End: Original strand, 48531326 - 48531412
Alignment:
Q  389 ccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||| |||||||| ||||  |||||||||  |||||| ||| |||||||||| ||||||||||||||||||||||||||||||    
T  48531326 ccctccgttcctcaatagatgatttagttgactctgacacacgtatcaatgcatatattttatctttgatatcttcaattctctact 48531412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 385 - 470
Target Start/End: Complemental strand, 4612348 - 4612263
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattct 470  Q
    |||||||| ||||||| ||||||||||| ||||||||  ||||||  ||||||||||||| |||||| ||||||||||||||||||    
T  4612348 tactccctacgtccctaaataaatgacccagttgactctgacacaaataccaatgcatatattttatgtttgatatcttcaattct 4612263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 394 - 475
Target Start/End: Original strand, 47537932 - 47538013
Alignment:
Q  394 cgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    ||||||||||||||||| ||| |||| |  || | | |||||||||||||||||||||||||||||||||||||||||||||    
T  47537932 cgtccctcaataaatgatctaattgattctgatatacgtaccaatgcatatgttttatctttgatatcttcaattctctact 47538013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 385 - 500
Target Start/End: Complemental strand, 31497964 - 31497849
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctactnnnnnnntt 484  Q
    ||||||||| |||||  | || || |||||||||||| |||||||  ||| ||| ||||||||||||||||||||||||||||| ||||||       ||    
T  31497964 tactccctcggtcccatattagataacctagttgactccgacacacatactaatacatatgttttatctttgatatcttcaattatctactaaaaaagtt 31497865  T
Q  485 atgaaaatttaatatt 500  Q
    ||||||||||||||||    
T  31497864 atgaaaatttaatatt 31497849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 407 - 475
Target Start/End: Original strand, 27916616 - 27916684
Alignment:
Q  407 atgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    ||||||||||||| | | ||||||||||||||| ||||||||||| |||||||||||||||| ||||||    
T  27916616 atgacctagttgagtccaacacatgtaccaatgtatatgttttatttttgatatcttcaattatctact 27916684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 385 - 451
Target Start/End: Complemental strand, 47713840 - 47713774
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttat 451  Q
    |||||||||||||||| ||||| ||||||||||||||  ||||||  ||||||||||||||||||||    
T  47713840 tactccctccgtccctaaataagtgacctagttgactctgacacacataccaatgcatatgttttat 47713774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 409 - 473
Target Start/End: Original strand, 2450712 - 2450777
Alignment:
Q  409 gacctagttgacttcgacacatgtaccaatgcatatg-ttttatctttgatatcttcaattctcta 473  Q
    ||||||||| ||| |||||| |||||||||||||||| |||||||||| |||||||||||||||||    
T  2450712 gacctagtttactccgacacctgtaccaatgcatatgtttttatctttaatatcttcaattctcta 2450777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 412 - 473
Target Start/End: Complemental strand, 29770708 - 29770647
Alignment:
Q  412 ctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctcta 473  Q
    |||||||||||||||| | ||||| |||||||| |||||| ||||||||||||||| |||||    
T  29770708 ctagttgacttcgacatacgtaccgatgcatattttttatttttgatatcttcaatgctcta 29770647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 423 - 475
Target Start/End: Complemental strand, 18795363 - 18795311
Alignment:
Q  423 cgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    ||||||| |||| |||| ||||||||||||||||||||||| |||||||||||    
T  18795363 cgacacacgtactaatgtatatgttttatctttgatatcttaaattctctact 18795311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 385 - 420
Target Start/End: Original strand, 10464115 - 10464150
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgac 420  Q
    ||||||||||||||||||||||||||||||||||||    
T  10464115 tactccctccgtccctcaataaatgacctagttgac 10464150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 385 - 420
Target Start/End: Original strand, 34478008 - 34478043
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgac 420  Q
    ||||||||||||||||||||||||||||||||||||    
T  34478008 tactccctccgtccctcaataaatgacctagttgac 34478043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 385 - 420
Target Start/End: Complemental strand, 36644000 - 36643965
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgac 420  Q
    ||||||||||||||||||||||||||||||||||||    
T  36644000 tactccctccgtccctcaataaatgacctagttgac 36643965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 436 - 473
Target Start/End: Complemental strand, 39982324 - 39982287
Alignment:
Q  436 aatgcatatgttttatctttgatatcttcaattctcta 473  Q
    |||||||||||||||||||| |||||||||||||||||    
T  39982324 aatgcatatgttttatctttaatatcttcaattctcta 39982287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 384 - 420
Target Start/End: Complemental strand, 47081242 - 47081206
Alignment:
Q  384 ctactccctccgtccctcaataaatgacctagttgac 420  Q
    ||||||||||||||||| |||||||||||||||||||    
T  47081242 ctactccctccgtcccttaataaatgacctagttgac 47081206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 377 - 420
Target Start/End: Complemental strand, 19073038 - 19072995
Alignment:
Q  377 ttaattactactccctccgtccctcaataaatgacctagttgac 420  Q
    ||||||| |||||||||||||||| ||||||||||| |||||||    
T  19073038 ttaattaatactccctccgtcccttaataaatgacccagttgac 19072995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 420
Target Start/End: Original strand, 31466358 - 31466393
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgac 420  Q
    |||||||||||||||| |||||||||||||||||||    
T  31466358 tactccctccgtcccttaataaatgacctagttgac 31466393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 420
Target Start/End: Original strand, 35500747 - 35500782
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgac 420  Q
    |||||||||||||||||||||| |||||||||||||    
T  35500747 tactccctccgtccctcaataattgacctagttgac 35500782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 420
Target Start/End: Complemental strand, 36819957 - 36819922
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgac 420  Q
    |||||||||||||||| |||||||||||||||||||    
T  36819957 tactccctccgtcccttaataaatgacctagttgac 36819922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 420
Target Start/End: Original strand, 37231563 - 37231598
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgac 420  Q
    ||||||||||||||||||||||| ||||||||||||    
T  37231563 tactccctccgtccctcaataaacgacctagttgac 37231598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 420
Target Start/End: Original strand, 37950945 - 37950980
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgac 420  Q
    |||||||||||||||| |||||||||||||||||||    
T  37950945 tactccctccgtcccttaataaatgacctagttgac 37950980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 420
Target Start/End: Original strand, 23473967 - 23474004
Alignment:
Q  383 actactccctccgtccctcaataaatgacctagttgac 420  Q
    |||||||| ||||||||| |||||||||||||||||||    
T  23473967 actactccatccgtcccttaataaatgacctagttgac 23474004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 416
Target Start/End: Original strand, 42834290 - 42834323
Alignment:
Q  383 actactccctccgtccctcaataaatgacctagt 416  Q
    |||||||||||||||||| |||||||||||||||    
T  42834290 actactccctccgtcccttaataaatgacctagt 42834323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 407 - 455
Target Start/End: Original strand, 33613238 - 33613286
Alignment:
Q  407 atgacctagttgacttcgacacatgtaccaatgcatatgttttatcttt 455  Q
    ||||||||||||||| ||||||   ||||||||||||||||||| ||||    
T  33613238 atgacctagttgactccgacacgcataccaatgcatatgttttaacttt 33613286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 384 - 420
Target Start/End: Complemental strand, 36905788 - 36905752
Alignment:
Q  384 ctactccctccgtccctcaataaatgacctagttgac 420  Q
    ||||||||||||||||| ||||||||||| |||||||    
T  36905788 ctactccctccgtccctaaataaatgacccagttgac 36905752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 74; Significance: 1e-33; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 385 - 474
Target Start/End: Complemental strand, 19170800 - 19170711
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctac 474  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  19170800 tactcgctccgtccctcaatagatgacctagttgacttcgacacatgtaccaatgcatatattttatctttaatatcttcaattctctac 19170711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 385 - 475
Target Start/End: Complemental strand, 3901400 - 3901310
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||||||||| ||||||||||||||||||||  ||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  3901400 tactccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctact 3901310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 379 - 473
Target Start/End: Original strand, 4264128 - 4264222
Alignment:
Q  379 aattactactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctcta 473  Q
    ||||| |||||||||||||||||||||||||||||||||||||  ||||||  ||||||||||||||||||||||||||||||||||||| ||||    
T  4264128 aattattactccctccgtccctcaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattatcta 4264222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 385 - 475
Target Start/End: Complemental strand, 18360234 - 18360144
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    ||||||||||||||||||||| |||||||||||||||  ||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  18360234 tactccctccgtccctcaatagatgacctagttgactctgacgcacgtaccaatgcatatgttttatctttgatatcttcaattctctact 18360144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 385 - 475
Target Start/End: Original strand, 36602694 - 36602784
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    ||||||||||||||||||||| |||||||||||||||  ||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  36602694 tactccctccgtccctcaatagatgacctagttgactctgacgcacgtaccaatgcatatgttttatctttgatatcttcaattctctact 36602784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 385 - 475
Target Start/End: Complemental strand, 39786617 - 39786527
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    ||||||||||||||||||||| |||||||||||||||  |||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  39786617 tactccctccgtccctcaatagatgacctagttgactctgacacacgtatcaatgcatatgttttatctttgatatcttcaattctctact 39786527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 385 - 475
Target Start/End: Complemental strand, 46212611 - 46212521
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||||||||| ||||||||||||||||||||  ||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  46212611 tactccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctact 46212521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 385 - 475
Target Start/End: Original strand, 46803631 - 46803721
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||||||||| ||||||||||||||||||||  ||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  46803631 tactccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctact 46803721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 382 - 475
Target Start/End: Complemental strand, 3442608 - 3442515
Alignment:
Q  382 tactactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    ||||||||||||||||||| |||||||||| |||||||||  ||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  3442608 tactactccctccgtccctaaataaatgacatagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctact 3442515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 385 - 475
Target Start/End: Original strand, 4209363 - 4209453
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    ||||||||||||||||||||| |||| ||||||||||  |||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  4209363 tactccctccgtccctcaatagatgatctagttgactctgacacacgtaccaatacatatgttttatctttgatatcttcaattctctact 4209453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 385 - 475
Target Start/End: Complemental strand, 7739080 - 7738990
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||| ||||||||| |||||||||||||||||||| ||||||| ||| |||||||||||||||||||||||||| ||||||||||||||    
T  7739080 tactccatccgtccctaaataaatgacctagttgactccgacacacgtatcaatgcatatgttttatctttgatatattcaattctctact 7738990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 385 - 475
Target Start/End: Complemental strand, 19525975 - 19525885
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    ||||||||||||||   | |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  19525975 tactccctccgtcctatattaaatgacctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctttact 19525885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 385 - 475
Target Start/End: Original strand, 23255935 - 23256025
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    ||||||||||||||||||||| |||||||||||||||  |||||| |||||||||||||| |||||| |||||||||||||||||||||||    
T  23255935 tactccctccgtccctcaatagatgacctagttgactctgacacacgtaccaatgcatatattttatatttgatatcttcaattctctact 23256025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 385 - 475
Target Start/End: Original strand, 28166274 - 28166364
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||||||||| ||||||||| ||||||||||  ||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  28166274 tactccctccgtccctaaataaatgatctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctact 28166364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 385 - 475
Target Start/End: Complemental strand, 45198601 - 45198511
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||||||||| ||||||||| ||||||||||  ||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  45198601 tactccctccgtccctaaataaatgatctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctact 45198511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 385 - 475
Target Start/End: Original strand, 47579287 - 47579377
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||||||||| ||||||||||||||||||||   |||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  47579287 tactccctccgtccctaaataaatgacctagttgactcttacacacataccaatgcatatgttttatctttgatatcttcaattctctact 47579377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 385 - 473
Target Start/End: Original strand, 5735271 - 5735359
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctcta 473  Q
    |||||||||||||||| ||||||||| ||||||||||  ||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  5735271 tactccctccgtccctaaataaatgatctagttgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctcta 5735359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 385 - 473
Target Start/End: Original strand, 25644359 - 25644447
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctcta 473  Q
    ||||||||| |||||  | ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  25644359 tactccctctgtcccatattaaatgatctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctcta 25644447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 385 - 475
Target Start/End: Complemental strand, 5123418 - 5123328
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||| |||||||||| ||||| |||||||||  |||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  5123418 tactccctccatccctcaatagatgacttagttgactctgacacacgtaccaatgcatatgttttatctttgatatcttcaattatctact 5123328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 385 - 475
Target Start/End: Complemental strand, 26205965 - 26205875
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||||||||| ||||||||| ||||||||||   |||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  26205965 tactccctccgtccctaaataaatgatctagttgactcttacacacataccaatgcatatgttttatctttgatatcttcaattctctact 26205875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 382 - 475
Target Start/End: Original strand, 1377029 - 1377122
Alignment:
Q  382 tactactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    ||||||||||| | ||| |||||||||||| |||||||||  ||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  1377029 tactactcccttcatccttcaataaatgacgtagttgactatgacacacataccaatgcatatgttttatctttgatatcttcaattctctact 1377122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 404 - 473
Target Start/End: Complemental strand, 6923182 - 6923113
Alignment:
Q  404 taaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctcta 473  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  6923182 taaatgatctagttgacttcgacacacgtaccaatgcatatgttttatctttgatatcttcaattctcta 6923113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 385 - 474
Target Start/End: Complemental strand, 19652516 - 19652427
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctac 474  Q
    |||| |||||||||||||||| |||| |||||||||| ||||| | |||||||| |||||||||||||||||||||||||||||||||||    
T  19652516 tacttcctccgtccctcaatatatgatctagttgactccgacatacgtaccaattcatatgttttatctttgatatcttcaattctctac 19652427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 385 - 473
Target Start/End: Complemental strand, 5744344 - 5744256
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctcta 473  Q
    |||||||||||||||| ||||||||||||||||||||  ||||||  || ||||| |||||||||||||||||||||||||||||||||    
T  5744344 tactccctccgtccctaaataaatgacctagttgactctgacacacatatcaatgtatatgttttatctttgatatcttcaattctcta 5744256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 385 - 473
Target Start/End: Complemental strand, 19634109 - 19634021
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctcta 473  Q
    |||||||| ||||||| |||| |||| |||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  19634109 tactcccttcgtcccttaatagatgatctagttgactccgacacacgtaccaattcatatgttttatctttgatatcttcaattctcta 19634021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 407 - 500
Target Start/End: Complemental strand, 19731404 - 19731311
Alignment:
Q  407 atgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctactnnnnnnnttatgaaaatttaatatt 500  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| |||||||       ||||||||||||||||||    
T  19731404 atgacctagttgactccgacacacgtaccaatgcatatgttttatctttgatatcttcaatgctctactaaaacaattatgaaaatttaatatt 19731311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 387 - 475
Target Start/End: Original strand, 28151993 - 28152081
Alignment:
Q  387 ctccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||||| | ||||||||||||||||||||  ||||||  |||||||||||||||||||| |||||||||||||||||||||||    
T  28151993 ctccctccgtccttaaataaatgacctagttgactctgacacacataccaatgcatatgttttatatttgatatcttcaattctctact 28152081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 385 - 473
Target Start/End: Complemental strand, 55190975 - 55190887
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctcta 473  Q
    |||| |||||||||||||||| |||||||||||||||  ||||||  ||||||||||||||||||||||||||||||||||||| ||||    
T  55190975 tacttcctccgtccctcaatagatgacctagttgactctgacacacttaccaatgcatatgttttatctttgatatcttcaattatcta 55190887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 385 - 475
Target Start/End: Original strand, 6494588 - 6494678
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||| ||||||||||| ||||||||||||||||||||  ||||||  || ||||||||||||||||||||| |||||||||||||||||||    
T  6494588 tacttcctccgtccctaaataaatgacctagttgactctgacacacatatcaatgcatatgttttatctttaatatcttcaattctctact 6494678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 385 - 475
Target Start/End: Complemental strand, 21859180 - 21859090
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||||||||| ||||||| ||||||||||||  ||||||  ||||||| ||||||||||||||||||||| ||||||||||||||    
T  21859180 tactccctccgtccctaaataaataacctagttgactctgacacacataccaatacatatgttttatctttgatattttcaattctctact 21859090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 385 - 475
Target Start/End: Complemental strand, 21915043 - 21914953
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||||||||| ||||||| ||||||||||||  ||||||  ||||||| ||||||||||||||||||||| ||||||||||||||    
T  21915043 tactccctccgtccctaaataaataacctagttgactctgacacacataccaatacatatgttttatctttgatattttcaattctctact 21914953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 385 - 475
Target Start/End: Complemental strand, 39260391 - 39260302
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    ||||||||| ||||||||||| |||| ||||||||||  ||||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  39260391 tactccctc-gtccctcaatagatgatctagttgactctgacacatgtaccaatacatatattttatctttgatatcttcaattctctact 39260302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 385 - 475
Target Start/End: Original strand, 50033020 - 50033110
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    ||||| |||||||||  | || ||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  50033020 tactctctccgtcccatattagatgacttagttgactccgacacacgtaccaatgcatatgttttatctttgatatcttcaattctctact 50033110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 390 - 475
Target Start/End: Complemental strand, 37688289 - 37688204
Alignment:
Q  390 cctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    ||||||||||| ||||||||| |||| |||||  ||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  37688289 cctccgtccctaaataaatgatctagatgactctgacacacataccaatgcatatgttttatctttgatatcttcaattctctact 37688204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 387 - 475
Target Start/End: Original strand, 49768447 - 49768535
Alignment:
Q  387 ctccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||||||| |||||||||| |||||||||  |||| |  || |||||||||||||||||||||||||||||||||||||||||    
T  49768447 ctccctccgtccctaaataaatgacttagttgactatgacatacatatcaatgcatatgttttatctttgatatcttcaattctctact 49768535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 390 - 475
Target Start/End: Complemental strand, 20678843 - 20678758
Alignment:
Q  390 cctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    ||||||||||| ||||||||| ||||||||||  ||||||| || |||||||||| ||||||||||||||| ||||||||||||||    
T  20678843 cctccgtccctaaataaatgatctagttgactctgacacatatatcaatgcatatattttatctttgatattttcaattctctact 20678758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 407 - 500
Target Start/End: Original strand, 26659862 - 26659955
Alignment:
Q  407 atgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctactnnnnnnnttatgaaaatttaatatt 500  Q
    ||||||||||||||| ||||||||||| || ||||||||||||| |||||||||||||||||||||| |       ||||||||||||||||||    
T  26659862 atgacctagttgactccgacacatgtatcactgcatatgttttagctttgatatcttcaattctctaataaaaaaattatgaaaatttaatatt 26659955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 407 - 473
Target Start/End: Original strand, 19631330 - 19631396
Alignment:
Q  407 atgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctcta 473  Q
    ||||| || |||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  19631330 atgacttaattgactccgacacacgtaccaatgcatatgttttatctttgatatcttcaattctcta 19631396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 385 - 475
Target Start/End: Original strand, 50035539 - 50035629
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    ||||| |||||||||  | || |||| |||||||||| ||||||| ||| ||||||||||||||||||||||| |||||||||||||||||    
T  50035539 tactctctccgtcccatattagatgatctagttgactccgacacacgtatcaatgcatatgttttatctttgaaatcttcaattctctact 50035629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 405 - 475
Target Start/End: Original strand, 53568374 - 53568444
Alignment:
Q  405 aaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    ||||| ||||||||||| |||||||  || |||||||||||||||||||||||||||||||||||| ||||    
T  53568374 aaatgtcctagttgactccgacacacatatcaatgcatatgttttatctttgatatcttcaattctttact 53568444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 417 - 473
Target Start/End: Original strand, 55997146 - 55997202
Alignment:
Q  417 tgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctcta 473  Q
    ||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||    
T  55997146 tgactccgacacacgtaccaatgcatacgttttatctttgatatcttcaattctcta 55997202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 424 - 475
Target Start/End: Complemental strand, 3443609 - 3443558
Alignment:
Q  424 gacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  3443609 gacacacgtacaaatgcatatgttttatctttgatatcttcaattctctact 3443558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 385 - 500
Target Start/End: Complemental strand, 51737214 - 51737099
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctactnnnnnnntt 484  Q
    ||||| |||||||||  | || || |||| ||||||| ||||||| ||||||||||||||||||||||||| |||| |||||||| || ||       ||    
T  51737214 tactctctccgtcccatattagataaccttgttgactccgacacacgtaccaatgcatatgttttatcttttatattttcaattcgctgctaaatttttt 51737115  T
Q  485 atgaaaatttaatatt 500  Q
    ||||||||||||||||    
T  51737114 atgaaaatttaatatt 51737099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 410 - 468
Target Start/End: Original strand, 55014287 - 55014345
Alignment:
Q  410 acctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaatt 468  Q
    |||||||||||| ||||||| |||| ||||||||||||||||||||||||| |||||||    
T  55014287 acctagttgactccgacacacgtactaatgcatatgttttatctttgatatattcaatt 55014345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 413 - 468
Target Start/End: Complemental strand, 23603880 - 23603825
Alignment:
Q  413 tagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaatt 468  Q
    |||||||||  |||||| |||||||||||| |||||||||||||||||||||||||    
T  23603880 tagttgactctgacacacgtaccaatgcatctgttttatctttgatatcttcaatt 23603825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 400 - 475
Target Start/End: Complemental strand, 42187225 - 42187150
Alignment:
Q  400 tcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||| ||||  |||||||||  |||| | |||||||||||||| |||||||||||||||||| |||||||||||    
T  42187225 tcaatagatgatttagttgactctgacatacgtaccaatgcatatattttatctttgatatctttaattctctact 42187150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 383 - 420
Target Start/End: Original strand, 7738817 - 7738854
Alignment:
Q  383 actactccctccgtccctcaataaatgacctagttgac 420  Q
    |||||||||||||||||| |||||||||||||||||||    
T  7738817 actactccctccgtcccttaataaatgacctagttgac 7738854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 388 - 420
Target Start/End: Original strand, 19525717 - 19525749
Alignment:
Q  388 tccctccgtccctcaataaatgacctagttgac 420  Q
    |||||||||||||||||||||||||||||||||    
T  19525717 tccctccgtccctcaataaatgacctagttgac 19525749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 436 - 472
Target Start/End: Complemental strand, 27976780 - 27976744
Alignment:
Q  436 aatgcatatgttttatctttgatatcttcaattctct 472  Q
    |||||||||||||||||||| ||||||||||||||||    
T  27976780 aatgcatatgttttatctttaatatcttcaattctct 27976744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 420
Target Start/End: Original strand, 3442344 - 3442379
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgac 420  Q
    |||||||||||||||| |||||||||||||||||||    
T  3442344 tactccctccgtcccttaataaatgacctagttgac 3442379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 420
Target Start/End: Complemental strand, 5735532 - 5735497
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgac 420  Q
    |||||||||||||||| |||||||||||||||||||    
T  5735532 tactccctccgtcccttaataaatgacctagttgac 5735497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 420
Target Start/End: Complemental strand, 25644620 - 25644585
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgac 420  Q
    |||||||||||||| |||||||||||||||||||||    
T  25644620 tactccctccgtccttcaataaatgacctagttgac 25644585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 420
Target Start/End: Complemental strand, 28152252 - 28152217
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgac 420  Q
    |||||||||||||||| |||||||||||||||||||    
T  28152252 tactccctccgtcccttaataaatgacctagttgac 28152217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 420
Target Start/End: Original strand, 45198340 - 45198375
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgac 420  Q
    |||||||||||||||| |||||||||||||||||||    
T  45198340 tactccctccgtcccttaataaatgacctagttgac 45198375  T

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Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 420
Target Start/End: Complemental strand, 47579547 - 47579512
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgac 420  Q
    |||||||||||||||| |||||||||||||||||||    
T  47579547 tactccctccgtcccttaataaatgacctagttgac 47579512  T

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Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 424 - 475
Target Start/End: Original strand, 50971499 - 50971549
Alignment:
Q  424 gacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||| ||||||||||||||||||||| |||||||| || |||||||||||    
T  50971499 gacacacgtaccaatgcatatgttttat-tttgatatatttaattctctact 50971549  T

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Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 385 - 419
Target Start/End: Original strand, 6922940 - 6922974
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttga 419  Q
    |||||||||||| ||||||||||||||||||||||    
T  6922940 tactccctccgttcctcaataaatgacctagttga 6922974  T

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Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 385 - 455
Target Start/End: Complemental strand, 39195742 - 39195672
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatcttt 455  Q
    |||||||| ||||||| | || |||||||||||||||  ||||||  || |||||||||| ||||||||||    
T  39195742 tactcccttcgtcccttattagatgacctagttgactctgacacacatatcaatgcatattttttatcttt 39195672  T

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Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 382 - 420
Target Start/End: Complemental strand, 50971692 - 50971654
Alignment:
Q  382 tactactccctccgtccctcaataaatgacctagttgac 420  Q
    ||||||||||||||||||| |||| ||||||||||||||    
T  50971692 tactactccctccgtcccttaatagatgacctagttgac 50971654  T

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Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 420
Target Start/End: Original strand, 23603645 - 23603682
Alignment:
Q  383 actactccctccgtccctcaataaatgacctagttgac 420  Q
    |||||||||||||| |||||||| ||||||||||||||    
T  23603645 actactccctccgttcctcaatagatgacctagttgac 23603682  T

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Target: scaffold0366 (Bit Score: 67; Significance: 1e-29; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 385 - 475
Target Start/End: Original strand, 14059 - 14149
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||||||||| ||||| ||||||||||||||  || ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  14059 tactccctccgtccctaaataagtgacctagttgactctgatacacgtaccaatgcatatgttttatctttgatatcttcaattctctact 14149  T

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Target: scaffold0366; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 385 - 475
Target Start/End: Original strand, 10393 - 10483
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||||||||| ||||| ||||||||||||||  ||||||  ||| ||||||||||||||||||||||||||||||||||||||||    
T  10393 tactccctccgtccctaaataagtgacctagttgactctgacacacatactaatgcatatgttttatctttgatatcttcaattctctact 10483  T

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Target: scaffold0092 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 385 - 475
Target Start/End: Complemental strand, 44369 - 44279
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||||||||| ||||||||||||||||||||  |||||   ||||||||||||||||||||||||||||||||||||||||||||    
T  44369 tactccctccgtccctaaataaatgacctagttgactctgacacgcataccaatgcatatgttttatctttgatatcttcaattctctact 44279  T

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Target: scaffold0459 (Bit Score: 63; Significance: 4e-27; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 385 - 475
Target Start/End: Original strand, 12752 - 12842
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    |||||||||||||||| ||||| ||||||||||||||  ||||||  ||| ||||||||||||||||||||||||||||||||||||||||    
T  12752 tactccctccgtccctaaataagtgacctagttgactctgacacacatactaatgcatatgttttatctttgatatcttcaattctctact 12842  T

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Target: scaffold0027 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 385 - 468
Target Start/End: Original strand, 117321 - 117404
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaatt 468  Q
    |||||||||||||||| ||||||||| ||||||||||  ||||||  || ||||||||||||||||||||| ||||||||||||    
T  117321 tactccctccgtccctaaataaatgatctagttgactctgacacacatatcaatgcatatgttttatctttaatatcttcaatt 117404  T

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Target: scaffold0027; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 388 - 420
Target Start/End: Complemental strand, 117579 - 117547
Alignment:
Q  388 tccctccgtccctcaataaatgacctagttgac 420  Q
    ||||||||||||| |||||||||||||||||||    
T  117579 tccctccgtcccttaataaatgacctagttgac 117547  T

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Target: scaffold0111 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 413 - 475
Target Start/End: Complemental strand, 38593 - 38531
Alignment:
Q  413 tagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||||||||||| ||||||    
T  38593 tagttgacttcgacatacgtaccaatgcatatgttttatctttgatatcttcaattatctact 38531  T

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Target: scaffold0007 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 385 - 475
Target Start/End: Complemental strand, 15477 - 15387
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattctctact 475  Q
    ||||||||| |||||| ||||| ||||||||||||||   ||||| ||||||||||||||| ||||   ||||||||||||||||||||||    
T  15477 tactccctcggtccctgaataactgacctagttgactctaacacacgtaccaatgcatatgatttactgttgatatcttcaattctctact 15387  T

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Target: scaffold0007; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 420
Target Start/End: Original strand, 15216 - 15251
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgac 420  Q
    |||||||||||||||| |||||||||||||||||||    
T  15216 tactccctccgtcccttaataaatgacctagttgac 15251  T

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Target: scaffold0340 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 385 - 470
Target Start/End: Original strand, 14345 - 14430
Alignment:
Q  385 tactccctccgtccctcaataaatgacctagttgacttcgacacatgtaccaatgcatatgttttatctttgatatcttcaattct 470  Q
    ||||||||| |||||||||||||| | |||||||| | ||||| |  ||| ||| |||||||||||||||||||||||||||||||    
T  14345 tactccctcggtccctcaataaataatctagttgattccgacatacttactaatacatatgttttatctttgatatcttcaattct 14430  T

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Target: scaffold0294 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 426 - 473
Target Start/End: Complemental strand, 12666 - 12619
Alignment:
Q  426 cacatgtaccaatgcatatgttttatctttgatatcttcaattctcta 473  Q
    ||||| ||||||||||||||||||||| || |||||||||||||||||    
T  12666 cacatataccaatgcatatgttttatcgttaatatcttcaattctcta 12619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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