View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14419_high_27 (Length: 225)
Name: NF14419_high_27
Description: NF14419
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14419_high_27 |
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Alignment Details
Target: chr4 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 43984923 - 43985129
Alignment:
| Q |
1 |
agtatatacaccaaaaaagtatacatatatattcacaagaagagattctaatttctaagttctaacacattcaattggcgtagaattgcggaacctttca |
100 |
Q |
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| T |
43984923 |
agtatatacaccaaaaaagtatacatatatattcacaagaagagattctaatttctaagttctaacacattcaattggcgtagaattgcggaacctttca |
43985022 |
T |
|
| Q |
101 |
atcgagaagttgcagtttcgttgaaatcctgcagaactttaatgagaaaacgcgctttcttagcagcatgagaagtaccatcagtaagaagcgaatagag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43985023 |
atcgagaagttgcagtttcgttgaaatcctgcagaactttaatgagaaaacgcgctttcttagcagcatgagaagtaccatcagtaagaagcgaatagag |
43985122 |
T |
|
| Q |
201 |
caaaggc |
207 |
Q |
| |
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||||||| |
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| T |
43985123 |
caaaggc |
43985129 |
T |
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