View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14419_high_5 (Length: 469)

Name: NF14419_high_5
Description: NF14419
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14419_high_5
NF14419_high_5
[»] chr3 (50 HSPs)
chr3 (15-164)||(17720-17872)
chr3 (343-400)||(44057540-44057597)
chr3 (197-255)||(32951338-32951396)
chr3 (344-398)||(35135765-35135819)
chr3 (197-255)||(4238822-4238880)
chr3 (197-255)||(17052865-17052923)
chr3 (197-255)||(27848953-27849011)
chr3 (197-255)||(28690517-28690575)
chr3 (197-255)||(39435237-39435295)
chr3 (343-400)||(901045-901102)
chr3 (343-400)||(34669653-34669710)
chr3 (343-400)||(36179093-36179150)
chr3 (343-400)||(50673722-50673779)
chr3 (342-403)||(53066528-53066589)
chr3 (343-387)||(2643226-2643270)
chr3 (203-255)||(10435141-10435193)
chr3 (343-387)||(18013427-18013471)
chr3 (343-403)||(49058015-49058075)
chr3 (343-398)||(10571191-10571246)
chr3 (343-398)||(32285223-32285278)
chr3 (343-402)||(34555194-34555253)
chr3 (343-398)||(51062549-51062604)
chr3 (197-255)||(3547622-3547680)
chr3 (201-255)||(7460022-7460076)
chr3 (197-255)||(8559207-8559265)
chr3 (197-255)||(18659053-18659111)
chr3 (197-255)||(21906997-21907055)
chr3 (197-255)||(29728300-29728358)
chr3 (163-201)||(36864589-36864627)
chr3 (197-255)||(37832901-37832959)
chr3 (197-255)||(43137852-43137910)
chr3 (197-259)||(52668683-52668745)
chr3 (197-255)||(54840330-54840388)
chr3 (343-400)||(9484641-9484698)
chr3 (343-400)||(12948085-12948142)
chr3 (355-388)||(21894355-21894388)
chr3 (343-400)||(29455665-29455722)
chr3 (343-400)||(29793335-29793392)
chr3 (343-400)||(34263661-34263718)
chr3 (344-405)||(38833923-38833984)
chr3 (343-400)||(42098584-42098641)
chr3 (343-400)||(49076383-49076440)
chr3 (343-384)||(53274952-53274993)
chr3 (343-399)||(25097233-25097289)
chr3 (215-255)||(45167318-45167358)
chr3 (343-387)||(47340041-47340085)
chr3 (343-403)||(48706888-48706948)
chr3 (343-387)||(48927759-48927803)
chr3 (344-400)||(50035115-50035171)
chr3 (343-403)||(54673937-54673997)
[»] chr4 (45 HSPs)
chr4 (17-158)||(39831879-39832017)
chr4 (85-158)||(20422995-20423068)
chr4 (106-156)||(46144774-46144824)
chr4 (197-255)||(19525916-19525974)
chr4 (197-255)||(3901341-3901399)
chr4 (197-255)||(4264135-4264193)
chr4 (197-255)||(25644360-25644418)
chr4 (344-402)||(31486734-31486792)
chr4 (197-255)||(46212552-46212610)
chr4 (197-255)||(46803632-46803690)
chr4 (343-400)||(3708298-3708355)
chr4 (343-400)||(39195535-39195592)
chr4 (343-387)||(37667735-37667779)
chr4 (342-398)||(40250735-40250791)
chr4 (343-398)||(7738866-7738921)
chr4 (343-398)||(18360020-18360075)
chr4 (344-391)||(25678472-25678519)
chr4 (343-398)||(36602853-36602908)
chr4 (197-255)||(3442546-3442604)
chr4 (197-255)||(5735272-5735330)
chr4 (197-255)||(6923142-6923200)
chr4 (205-255)||(14958017-14958067)
chr4 (197-259)||(19170737-19170799)
chr4 (201-259)||(20678785-20678843)
chr4 (197-259)||(23255936-23255998)
chr4 (197-255)||(28166275-28166333)
chr4 (197-255)||(45198542-45198600)
chr4 (197-255)||(47579288-47579346)
chr4 (343-405)||(47834105-47834167)
chr4 (344-402)||(48380516-48380574)
chr4 (343-400)||(8525377-8525434)
chr4 (343-388)||(14958158-14958203)
chr4 (343-384)||(27976631-27976672)
chr4 (198-255)||(28151993-28152050)
chr4 (343-400)||(31152706-31152763)
chr4 (198-255)||(31486288-31486345)
chr4 (343-400)||(43447210-43447267)
chr4 (342-374)||(1348742-1348774)
chr4 (343-387)||(1613179-1613223)
chr4 (343-403)||(19170581-19170641)
chr4 (17-61)||(20423062-20423106)
chr4 (343-387)||(29424704-29424748)
chr4 (343-387)||(43047445-43047489)
chr4 (343-387)||(50684978-50685022)
chr4 (343-387)||(53987741-53987785)
[»] chr5 (40 HSPs)
chr5 (85-158)||(10470117-10470190)
chr5 (85-158)||(43511089-43511162)
chr5 (343-400)||(14057753-14057810)
chr5 (343-442)||(33402553-33402652)
chr5 (197-255)||(970139-970197)
chr5 (197-255)||(23988580-23988638)
chr5 (197-259)||(25946295-25946357)
chr5 (197-255)||(35448199-35448257)
chr5 (197-255)||(39405765-39405823)
chr5 (201-255)||(43067234-43067288)
chr5 (343-387)||(31191139-31191183)
chr5 (343-403)||(43517102-43517162)
chr5 (343-374)||(967263-967294)
chr5 (343-398)||(5212969-5213024)
chr5 (196-255)||(5364420-5364479)
chr5 (343-398)||(21961386-21961441)
chr5 (343-402)||(35641812-35641871)
chr5 (201-255)||(4300034-4300088)
chr5 (197-255)||(16048084-16048142)
chr5 (197-255)||(22613911-22613969)
chr5 (197-255)||(29627269-29627327)
chr5 (343-405)||(30788245-30788307)
chr5 (197-255)||(32334842-32334900)
chr5 (197-259)||(35290287-35290349)
chr5 (197-255)||(38697964-38698022)
chr5 (197-255)||(40512882-40512940)
chr5 (197-255)||(42148308-42148366)
chr5 (343-400)||(1098220-1098277)
chr5 (343-400)||(13548258-13548315)
chr5 (343-400)||(20022905-20022962)
chr5 (343-400)||(20040377-20040434)
chr5 (343-384)||(30721647-30721688)
chr5 (343-400)||(41263091-41263148)
chr5 (343-387)||(1781107-1781151)
chr5 (342-374)||(4152271-4152303)
chr5 (17-61)||(10470184-10470228)
chr5 (343-387)||(27675598-27675642)
chr5 (343-387)||(28142986-28143030)
chr5 (343-387)||(30211703-30211747)
chr5 (342-398)||(35290444-35290500)
[»] chr7 (37 HSPs)
chr7 (87-156)||(45432883-45432952)
chr7 (343-434)||(40348566-40348657)
chr7 (197-255)||(2400286-2400344)
chr7 (197-255)||(10464317-10464375)
chr7 (197-255)||(34478213-34478271)
chr7 (197-255)||(37231766-37231824)
chr7 (197-255)||(35500949-35501007)
chr7 (197-255)||(36819697-36819755)
chr7 (343-384)||(40089601-40089642)
chr7 (343-398)||(3680395-3680450)
chr7 (343-398)||(31466405-31466460)
chr7 (343-390)||(42493572-42493619)
chr7 (343-398)||(46657792-46657847)
chr7 (343-398)||(47713549-47713604)
chr7 (343-398)||(48531481-48531536)
chr7 (197-259)||(4612285-4612347)
chr7 (344-390)||(7314308-7314354)
chr7 (343-405)||(9173298-9173360)
chr7 (197-255)||(19072770-19072828)
chr7 (197-255)||(28185610-28185668)
chr7 (343-405)||(37100988-37101050)
chr7 (343-393)||(38498776-38498826)
chr7 (197-255)||(42086840-42086898)
chr7 (197-255)||(47080981-47081039)
chr7 (197-255)||(47713704-47713762)
chr7 (197-255)||(47713781-47713839)
chr7 (343-400)||(16807108-16807165)
chr7 (343-400)||(30462183-30462240)
chr7 (343-400)||(31496607-31496664)
chr7 (343-400)||(38069096-38069153)
chr7 (343-403)||(18795182-18795242)
chr7 (343-395)||(21392177-21392229)
chr7 (343-387)||(26651171-26651215)
chr7 (343-387)||(28016173-28016217)
chr7 (343-387)||(32222608-32222652)
chr7 (126-200)||(32498370-32498441)
chr7 (17-61)||(45432843-45432887)
[»] chr2 (41 HSPs)
chr2 (85-158)||(34238656-34238729)
chr2 (78-158)||(41768855-41768934)
chr2 (343-442)||(27667961-27668060)
chr2 (109-158)||(41770454-41770503)
chr2 (197-255)||(40598129-40598187)
chr2 (343-405)||(43409444-43409506)
chr2 (343-405)||(2831747-2831809)
chr2 (197-255)||(14372078-14372136)
chr2 (197-255)||(23671377-23671435)
chr2 (342-403)||(38963677-38963738)
chr2 (199-255)||(14707736-14707792)
chr2 (17-61)||(34238618-34238662)
chr2 (343-387)||(41575620-41575664)
chr2 (345-400)||(6075170-6075225)
chr2 (342-405)||(37806822-37806885)
chr2 (40-117)||(41769693-41769767)
chr2 (188-255)||(42038516-42038582)
chr2 (343-398)||(43925121-43925176)
chr2 (343-401)||(5030328-5030386)
chr2 (343-405)||(16127741-16127803)
chr2 (197-255)||(18718240-18718298)
chr2 (197-255)||(34826913-34826971)
chr2 (197-255)||(40425451-40425509)
chr2 (197-255)||(41172959-41173017)
chr2 (197-259)||(44283477-44283539)
chr2 (343-384)||(4137470-4137511)
chr2 (218-255)||(5030473-5030510)
chr2 (343-400)||(7724572-7724629)
chr2 (343-400)||(8373479-8373536)
chr2 (343-400)||(8896316-8896373)
chr2 (343-400)||(12209034-12209091)
chr2 (343-400)||(31603377-31603434)
chr2 (343-400)||(32776166-32776223)
chr2 (343-400)||(38963840-38963897)
chr2 (343-400)||(40471781-40471838)
chr2 (343-400)||(41436877-41436934)
chr2 (342-387)||(43328761-43328806)
chr2 (344-392)||(19192711-19192759)
chr2 (342-390)||(23873232-23873280)
chr2 (343-387)||(37987897-37987941)
chr2 (215-255)||(44330403-44330443)
[»] chr8 (40 HSPs)
chr8 (85-158)||(42294210-42294283)
chr8 (197-259)||(11854525-11854587)
chr8 (197-255)||(40013652-40013710)
chr8 (343-400)||(42786057-42786114)
chr8 (343-431)||(26627916-26628004)
chr8 (343-398)||(8350927-8350982)
chr8 (343-398)||(25256492-25256547)
chr8 (197-255)||(3293304-3293362)
chr8 (197-255)||(29790943-29791001)
chr8 (343-405)||(38842203-38842265)
chr8 (197-255)||(38845201-38845259)
chr8 (343-384)||(35584133-35584174)
chr8 (343-387)||(4327078-4327122)
chr8 (342-398)||(10658135-10658191)
chr8 (343-387)||(15870233-15870277)
chr8 (344-400)||(40645654-40645710)
chr8 (343-398)||(12893687-12893742)
chr8 (343-398)||(40013810-40013865)
chr8 (197-259)||(1580963-1581025)
chr8 (197-255)||(18809277-18809335)
chr8 (343-405)||(20671296-20671358)
chr8 (197-255)||(30289925-30289983)
chr8 (197-255)||(38739658-38739716)
chr8 (201-255)||(43066132-43066186)
chr8 (197-255)||(45081813-45081871)
chr8 (343-400)||(21132887-21132944)
chr8 (342-387)||(23547126-23547171)
chr8 (343-400)||(25691556-25691613)
chr8 (343-400)||(30464477-30464534)
chr8 (343-400)||(43184738-43184795)
chr8 (343-384)||(44039886-44039927)
chr8 (343-400)||(44887674-44887731)
chr8 (343-387)||(761608-761652)
chr8 (187-255)||(2805678-2805745)
chr8 (343-387)||(17523863-17523907)
chr8 (343-387)||(25009202-25009246)
chr8 (343-387)||(29616285-29616329)
chr8 (343-387)||(30653418-30653462)
chr8 (343-403)||(31127847-31127907)
chr8 (343-387)||(44947075-44947119)
[»] chr6 (25 HSPs)
chr6 (343-430)||(12869380-12869467)
chr6 (343-400)||(19788623-19788680)
chr6 (343-442)||(16434546-16434645)
chr6 (353-400)||(34500918-34500965)
chr6 (197-255)||(643633-643691)
chr6 (189-255)||(11114558-11114624)
chr6 (197-255)||(33121543-33121601)
chr6 (343-400)||(2141613-2141670)
chr6 (343-400)||(6142473-6142530)
chr6 (343-400)||(9022885-9022942)
chr6 (343-400)||(16969423-16969480)
chr6 (343-400)||(29514992-29515049)
chr6 (215-259)||(24150760-24150804)
chr6 (343-398)||(16696063-16696118)
chr6 (343-398)||(18992062-18992117)
chr6 (197-255)||(16434730-16434788)
chr6 (343-405)||(30699301-30699363)
chr6 (343-400)||(17496284-17496341)
chr6 (343-400)||(19762316-19762373)
chr6 (343-400)||(24798512-24798569)
chr6 (343-400)||(24825210-24825267)
chr6 (343-387)||(2397828-2397872)
chr6 (343-387)||(4890092-4890136)
chr6 (215-255)||(22020295-22020335)
chr6 (343-387)||(32541443-32541487)
[»] chr1 (45 HSPs)
chr1 (344-402)||(31698626-31698684)
chr1 (341-386)||(37515494-37515539)
chr1 (199-255)||(16266165-16266221)
chr1 (342-398)||(52163609-52163665)
chr1 (197-255)||(3898773-3898831)
chr1 (197-255)||(16265034-16265092)
chr1 (197-255)||(24982352-24982410)
chr1 (197-255)||(25531779-25531837)
chr1 (197-255)||(26441638-26441696)
chr1 (347-405)||(27581039-27581097)
chr1 (197-255)||(43680070-43680128)
chr1 (197-255)||(48219844-48219902)
chr1 (197-255)||(48265013-48265071)
chr1 (197-255)||(50876365-50876423)
chr1 (343-400)||(30005773-30005830)
chr1 (97-158)||(44769510-44769571)
chr1 (343-387)||(2138995-2139039)
chr1 (343-387)||(31932144-31932188)
chr1 (343-387)||(36035744-36035788)
chr1 (343-387)||(49903651-49903695)
chr1 (343-402)||(50295902-50295961)
chr1 (342-400)||(10124154-10124212)
chr1 (197-255)||(16751655-16751713)
chr1 (163-201)||(19534084-19534122)
chr1 (342-400)||(26543913-26543971)
chr1 (197-255)||(30529252-30529310)
chr1 (197-255)||(32988551-32988609)
chr1 (197-255)||(39354466-39354524)
chr1 (343-405)||(43453131-43453193)
chr1 (201-255)||(47222219-47222273)
chr1 (197-255)||(50539261-50539319)
chr1 (197-255)||(52378990-52379048)
chr1 (343-400)||(1821594-1821651)
chr1 (343-392)||(3555257-3555306)
chr1 (343-400)||(10100479-10100536)
chr1 (347-400)||(40883456-40883509)
chr1 (194-255)||(49805454-49805515)
chr1 (343-387)||(6017415-6017459)
chr1 (343-387)||(7075296-7075340)
chr1 (199-255)||(14075738-14075794)
chr1 (343-387)||(23393290-23393334)
chr1 (343-403)||(23569716-23569776)
chr1 (346-390)||(27990770-27990814)
chr1 (343-403)||(37281251-37281311)
chr1 (343-387)||(38786912-38786956)
[»] scaffold0051 (1 HSPs)
scaffold0051 (188-255)||(41419-41486)
[»] scaffold0366 (1 HSPs)
scaffold0366 (343-398)||(14218-14273)
[»] scaffold1248 (1 HSPs)
scaffold1248 (343-405)||(1418-1480)
[»] scaffold0952 (1 HSPs)
scaffold0952 (343-405)||(833-895)
[»] scaffold0717 (1 HSPs)
scaffold0717 (342-384)||(4149-4191)
[»] scaffold0092 (1 HSPs)
scaffold0092 (197-255)||(44310-44368)
[»] scaffold0027 (1 HSPs)
scaffold0027 (343-405)||(117480-117542)
[»] scaffold0221 (1 HSPs)
scaffold0221 (343-400)||(5421-5478)
[»] scaffold0001 (1 HSPs)
scaffold0001 (343-400)||(184011-184068)
[»] scaffold0283 (1 HSPs)
scaffold0283 (343-387)||(3053-3097)


Alignment Details
Target: chr3 (Bit Score: 91; Significance: 7e-44; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 15 - 164
Target Start/End: Original strand, 17720 - 17872
Alignment:
Q  15 tcgagagagaagaaaggtgaaatac---agaggaggaggaaggagaaggggtaacggggagaaaccaataaaaagaagggaaaataatcatgtacaatta 111  Q
    ||||||||||||||||||||||  |   |||| |||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||||  |||||    
T  17720 tcgagagagaagaaaggtgaaaaccgatagagaaggaggaaggagaaggggtaacggggagaagcgaataaaaaaaagggaaaataatcatgtgtaatta 17819  T
Q  112 attttatatgaagcttttaatctgatccgtacaatttgatctaatggatacta 164  Q
    |||||||||  ||||||||||||||||||||||||||||||||| || |||||    
T  17820 attttatatcgagcttttaatctgatccgtacaatttgatctaaaggctacta 17872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 343 - 400
Target Start/End: Original strand, 44057540 - 44057597
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaa 400  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||    
T  44057540 atattatttatctttgtatattagtagaaaaacatgatcaaagtatgtcatgtcaaaa 44057597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 197 - 255
Target Start/End: Complemental strand, 32951396 - 32951338
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||||||||||||||||||||| ||||| ||||| |||||| ||||||||||||||    
T  32951396 actccctccgtcccatattaaatgatctagttgacttcgacacacataccaatgcatat 32951338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 344 - 398
Target Start/End: Complemental strand, 35135819 - 35135765
Alignment:
Q  344 tattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaa 398  Q
    |||||||||| ||||||||||| |||||||||||| ||||||||||||| |||||    
T  35135819 tattatttatctttgtatattagtagaaaaacatggtcaaagtatgtcaggtcaa 35135765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 197 - 255
Target Start/End: Complemental strand, 4238880 - 4238822
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||||||| ||||||||||||| ||||| ||||| ||||||  |||||||||||||    
T  4238880 actccctccgttccatattaaatgatctagttgacttcgacacacgtaccaatgcatat 4238822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 197 - 255
Target Start/End: Original strand, 17052865 - 17052923
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    |||||||||||| |||||||||||| ||||| ||||| ||||||  |||||||||||||    
T  17052865 actccctccgtctcatattaaatgatctagttgacttcgacacacgtaccaatgcatat 17052923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 197 - 255
Target Start/End: Original strand, 27848953 - 27849011
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||||||||||  |||| |||||||||| |||||||||| | ||||||||||||||    
T  27848953 actccctccgtccctcattagatgacctagttgactttgacatacataccaatgcatat 27849011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 197 - 255
Target Start/End: Original strand, 28690517 - 28690575
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    |||||||||||| ||||||| |||||||||| ||||  |||||| ||||||||||||||    
T  28690517 actccctccgtcacatattagatgacctagttgactccgacacacataccaatgcatat 28690575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 197 - 255
Target Start/End: Complemental strand, 39435295 - 39435237
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    |||||||||||||| ||||| |||||||||| || | |||||||||||||||| |||||    
T  39435295 actccctccgtcccttattagatgacctagttgattctgacacatataccaatacatat 39435237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 343 - 400
Target Start/End: Original strand, 901045 - 901102
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaa 400  Q
    ||||||||||| ||||||||||| |||||||| |||||||||||| || | |||||||    
T  901045 atattatttatctttgtatattagtagaaaaatatgatcaaagtaagttaggtcaaaa 901102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 343 - 400
Target Start/End: Complemental strand, 34669710 - 34669653
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaa 400  Q
    ||||||||||| ||||||||||| |||||||| |||||||||||| || | |||||||    
T  34669710 atattatttatctttgtatattagtagaaaaatatgatcaaagtaagttaggtcaaaa 34669653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 343 - 400
Target Start/End: Original strand, 36179093 - 36179150
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaa 400  Q
    ||||||||||| ||||||||||| |||||||| ||||||||||||  | |||||||||    
T  36179093 atattatttatctttgtatattagtagaaaaatatgatcaaagtaaattaagtcaaaa 36179150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 343 - 400
Target Start/End: Complemental strand, 50673779 - 50673722
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaa 400  Q
    ||||||||||| ||||||||||| |||||||| ||| |||||||| || |||||||||    
T  50673779 atattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaagtcaaaa 50673722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 342 - 403
Target Start/End: Original strand, 53066528 - 53066589
Alignment:
Q  342 aatattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaaata 403  Q
    |||||||||||| |||||  |||| |||||||  ||||||||||||||||||||||| ||||    
T  53066528 aatattatttatctttgtgaattagtagaaaagtatgatcaaagtatgtcaagtcaataata 53066589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 343 - 387
Target Start/End: Original strand, 2643226 - 2643270
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagta 387  Q
    ||||||||||||||||||||||| |||||||| ||| ||||||||    
T  2643226 atattatttatatttgtatattagtagaaaaatatggtcaaagta 2643270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 203 - 255
Target Start/End: Original strand, 10435141 - 10435193
Alignment:
Q  203 tccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||||||||||||||| ||||| ||||| ||||||  |||||||||||||    
T  10435141 tccgtcccatattaaatgatctagttgacttcgacacacgtaccaatgcatat 10435193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 343 - 387
Target Start/End: Original strand, 18013427 - 18013471
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagta 387  Q
    ||||||||||| ||||||||||| |||||||| ||||||||||||    
T  18013427 atattatttatctttgtatattagtagaaaaatatgatcaaagta 18013471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 343 - 403
Target Start/End: Original strand, 49058015 - 49058075
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaaata 403  Q
    ||||||||||| |||||  |||| |||||||| |||||||||||| |||||||||| ||||    
T  49058015 atattatttatctttgtgaattagtagaaaaatatgatcaaagtacgtcaagtcaataata 49058075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 398
Target Start/End: Complemental strand, 10571246 - 10571191
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaa 398  Q
    ||||||||||| |||||| |||| || ||||| ||| |||||||||||||||||||    
T  10571246 atattatttatctttgtaaattagtataaaaatatggtcaaagtatgtcaagtcaa 10571191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 398
Target Start/End: Complemental strand, 32285278 - 32285223
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaa 398  Q
    ||||||||||| |||||  |||| |||||||  |||||||||||||||||||||||    
T  32285278 atattatttatctttgtgaattagtagaaaagtatgatcaaagtatgtcaagtcaa 32285223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 402
Target Start/End: Complemental strand, 34555253 - 34555194
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaaat 402  Q
    ||||||||||| ||||||||||| |||||||| ||| |||||||| || | |||||||||    
T  34555253 atattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaaat 34555194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 398
Target Start/End: Original strand, 51062549 - 51062604
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaa 398  Q
    ||||||||||| |||||  |||| |||||||| ||| |||||||||||||||||||    
T  51062549 atattatttatctttgtgaattagtagaaaaatatggtcaaagtatgtcaagtcaa 51062604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 255
Target Start/End: Complemental strand, 3547680 - 3547622
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    |||||||||||||||||||| |||||||| | ||||  ||||||  |||||||||||||    
T  3547680 actccctccgtcccatattagatgacctaattgactccgacacacgtaccaatgcatat 3547622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 201 - 255
Target Start/End: Complemental strand, 7460076 - 7460022
Alignment:
Q  201 cctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||||||  | ||||||||||||| |||| ||||||| ||||||||||||||    
T  7460076 cctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatat 7460022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 255
Target Start/End: Complemental strand, 8559265 - 8559207
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||| ||||||||  | ||||||||||||| |||| ||||||| ||||||||||||||    
T  8559265 actccatccgtccctaaataaatgacctagttgactctgacacacataccaatgcatat 8559207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 255
Target Start/End: Original strand, 18659053 - 18659111
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||||||||||  | ||||||| ||||| |||| ||||||| ||||||||||||||    
T  18659053 actccctccgtccctaaataaatgatctagttgactctgacacacataccaatgcatat 18659111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 255
Target Start/End: Original strand, 21906997 - 21907055
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||||||||||  | ||||||| ||||| |||| ||||||| ||||||||||||||    
T  21906997 actccctccgtccctcaataaatgatctagttgactctgacacacataccaatgcatat 21907055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 255
Target Start/End: Complemental strand, 29728358 - 29728300
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||||||||||  | ||||||||||||| |||| |||||||  |||||||||||||    
T  29728358 actccctccgtccctcaataaatgacctagttgactctgacacaagtaccaatgcatat 29728300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 163 - 201
Target Start/End: Original strand, 36864589 - 36864627
Alignment:
Q  163 tattatttaatcttctcaccctctcataataatcactcc 201  Q
    ||||||||| || ||||||||||||||||||||||||||    
T  36864589 tattatttactcctctcaccctctcataataatcactcc 36864627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 255
Target Start/End: Original strand, 37832901 - 37832959
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||||||||||  | |||||||| |||| |||| ||||||| ||||||||||||||    
T  37832901 actccctccgtccctaaataaatgacatagttgactctgacacacataccaatgcatat 37832959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 255
Target Start/End: Original strand, 43137852 - 43137910
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||||||||||  | ||||||| ||||| |||| ||||||| ||||||||||||||    
T  43137852 actccctccgtccctaaataaatgatctagttgactctgacacacataccaatgcatat 43137910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 259
Target Start/End: Complemental strand, 52668745 - 52668683
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatatattt 259  Q
    ||||||||||||||  | ||||||||||||| | || ||||||| ||| ||||||||||||||    
T  52668745 actccctccgtccctaaataaatgacctagttggctctgacacacatatcaatgcatatattt 52668683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 255
Target Start/End: Complemental strand, 54840388 - 54840330
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||||| ||||  | ||||||||||||| |||| ||||||| ||||||||||||||    
T  54840388 actccctccatccctaaataaatgacctagttgactctgacacacataccaatgcatat 54840330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 400
Target Start/End: Complemental strand, 9484698 - 9484641
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaa 400  Q
    ||||||||||| ||||||||||| |||||||| ||| |||||||| || | |||||||    
T  9484698 atattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaa 9484641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 400
Target Start/End: Complemental strand, 12948142 - 12948085
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaa 400  Q
    ||||||||||| ||||||||||| |||||||| ||| |||||||| || | |||||||    
T  12948142 atattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaa 12948085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 355 - 388
Target Start/End: Original strand, 21894355 - 21894388
Alignment:
Q  355 tttgtatattaatagaaaaacatgatcaaagtat 388  Q
    |||||||||||||||||||| |||||||||||||    
T  21894355 tttgtatattaatagaaaaatatgatcaaagtat 21894388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 400
Target Start/End: Original strand, 29455665 - 29455722
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaa 400  Q
    ||||||||||| ||||||||||| |||||||| ||| |||||||| || | |||||||    
T  29455665 atattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaa 29455722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 400
Target Start/End: Original strand, 29793335 - 29793392
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaa 400  Q
    ||||||||||| ||||||||||| |||||||| ||| |||||||| || | |||||||    
T  29793335 atattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaa 29793392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 400
Target Start/End: Original strand, 34263661 - 34263718
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaa 400  Q
    ||||||||||| ||||||||||| |||||||| ||| |||||||| || | |||||||    
T  34263661 atattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaa 34263718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 405
Target Start/End: Original strand, 38833923 - 38833984
Alignment:
Q  344 tattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaaataca 405  Q
    |||||||||| ||||||||||| |||||||| ||| |||||||| || | ||||||| ||||    
T  38833923 tattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattaca 38833984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 400
Target Start/End: Original strand, 42098584 - 42098641
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaa 400  Q
    ||||||||||| ||||||||||| |||||||| ||| |||||||| || | |||||||    
T  42098584 atattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaa 42098641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 400
Target Start/End: Original strand, 49076383 - 49076440
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaa 400  Q
    ||||||||||| ||||||||||| |||||||| ||| |||||||| || | |||||||    
T  49076383 atattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaa 49076440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 384
Target Start/End: Original strand, 53274952 - 53274993
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaa 384  Q
    ||||||||||| ||||||||||| |||||||| |||||||||    
T  53274952 atattatttatctttgtatattagtagaaaaatatgatcaaa 53274993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 343 - 399
Target Start/End: Complemental strand, 25097289 - 25097233
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaa 399  Q
    ||||||||||| |||||  |||| |||||||  ||| ||||||||||||||||||||    
T  25097289 atattatttatctttgtgaattagtagaaaagtatggtcaaagtatgtcaagtcaaa 25097233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 215 - 255
Target Start/End: Original strand, 45167318 - 45167358
Alignment:
Q  215 taaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||||||||| |||| ||||||| ||||||||||||||    
T  45167318 taaatgacctagttgactctgacacacataccaatgcatat 45167358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 343 - 387
Target Start/End: Original strand, 47340041 - 47340085
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagta 387  Q
    ||||||||||| ||| ||||||| |||||||| ||||||||||||    
T  47340041 atattatttatctttatatattagtagaaaaatatgatcaaagta 47340085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 343 - 403
Target Start/End: Complemental strand, 48706948 - 48706888
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaaata 403  Q
    ||||||||||| |||||  |||| |||||||  ||||||||| ||||||||||||| ||||    
T  48706948 atattatttatctttgtgaattagtagaaaagtatgatcaaaatatgtcaagtcaataata 48706888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 343 - 387
Target Start/End: Original strand, 48927759 - 48927803
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagta 387  Q
    ||||||||||| ||||||||||| |||||||| ||| ||||||||    
T  48927759 atattatttatctttgtatattagtagaaaaatatggtcaaagta 48927803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 344 - 400
Target Start/End: Complemental strand, 50035171 - 50035115
Alignment:
Q  344 tattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaa 400  Q
    |||||||||| ||||||||||| || ||||||||| |||||||| || | |||||||    
T  50035171 tattatttatctttgtatattagtataaaaacatggtcaaagtaagttaggtcaaaa 50035115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 343 - 403
Target Start/End: Original strand, 54673937 - 54673997
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaaata 403  Q
    ||||||||||| |||||  |||| |||||||| |||||||||||| ||||| |||| ||||    
T  54673937 atattatttatctttgttaattagtagaaaaatatgatcaaagtacgtcaaatcaataata 54673997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 80; Significance: 2e-37; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 17 - 158
Target Start/End: Original strand, 39831879 - 39832017
Alignment:
Q  17 gagagagaagaaaggtgaaatacagaggaggaggaaggagaaggggtaacggggagaaaccaataaaaagaagggaaaataatcatgtacaattaatttt 116  Q
    ||||||||||||| ||||||   |||| |||||||||||||| |  ||||||||||||    |||||||||||||||||||||||||| |||||||||||    
T  39831879 gagagagaagaaatgtgaaaactagagaaggaggaaggagaaagactaacggggagaag---ataaaaagaagggaaaataatcatgtgcaattaatttt 39831975  T
Q  117 atatgaagcttttaatctgatccgtacaatttgatctaatgg 158  Q
    |||||||| |||||||||||||| ||||||||||||||||||    
T  39831976 atatgaagtttttaatctgatccatacaatttgatctaatgg 39832017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 20423068 - 20422995
Alignment:
Q  85 agaagggaaaataatcatgtacaattaattttatatgaagcttttaatctgatccgtacaatttgatctaatgg 158  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  20423068 agaagggaaaataatcatgtgcaatcaattttatatgaagcttttaatctgatccgttcaatttgatttaatgg 20422995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 106 - 156
Target Start/End: Complemental strand, 46144824 - 46144774
Alignment:
Q  106 caattaattttatatgaagcttttaatctgatccgtacaatttgatctaat 156  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  46144824 caattaattttatatgaagcttttaatctgatccatacaatttgatctaat 46144774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 197 - 255
Target Start/End: Complemental strand, 19525974 - 19525916
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||||||||| ||||||||||||||||| ||||| ||||||  |||||||||||||    
T  19525974 actccctccgtcctatattaaatgacctagttgacttcgacacacgtaccaatgcatat 19525916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 197 - 255
Target Start/End: Complemental strand, 3901399 - 3901341
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||||||||||  | ||||||||||||| |||| ||||||| ||||||||||||||    
T  3901399 actccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatat 3901341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 197 - 255
Target Start/End: Original strand, 4264135 - 4264193
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||||||||||  | ||||||||||||| |||| ||||||| ||||||||||||||    
T  4264135 actccctccgtccctcaataaatgacctagttgactctgacacacataccaatgcatat 4264193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 197 - 255
Target Start/End: Original strand, 25644360 - 25644418
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    |||||||| |||||||||||||||| ||||| ||||| ||||||  |||||||||||||    
T  25644360 actccctctgtcccatattaaatgatctagttgacttcgacacacgtaccaatgcatat 25644418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 344 - 402
Target Start/End: Original strand, 31486734 - 31486792
Alignment:
Q  344 tattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaaat 402  Q
    |||||||||| ||||||| ||| |||||||| ||||| ||||||||||| |||||||||    
T  31486734 tattatttatctttgtatgttactagaaaaatatgattaaagtatgtcaggtcaaaaat 31486792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 197 - 255
Target Start/End: Complemental strand, 46212610 - 46212552
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||||||||||  | ||||||||||||| |||| ||||||| ||||||||||||||    
T  46212610 actccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatat 46212552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 197 - 255
Target Start/End: Original strand, 46803632 - 46803690
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||||||||||  | ||||||||||||| |||| ||||||| ||||||||||||||    
T  46803632 actccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatat 46803690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 343 - 400
Target Start/End: Complemental strand, 3708355 - 3708298
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaa 400  Q
    ||||||||||| ||||||||||| |||||||| |||||||||||| || | |||||||    
T  3708355 atattatttatctttgtatattagtagaaaaatatgatcaaagtaagttaggtcaaaa 3708298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 343 - 400
Target Start/End: Complemental strand, 39195592 - 39195535
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaa 400  Q
    ||||||||||| ||||||||||| || ||||| ||| ||||||||||||| |||||||    
T  39195592 atattatttatctttgtatattagtataaaaatatggtcaaagtatgtcaggtcaaaa 39195535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 343 - 387
Target Start/End: Original strand, 37667735 - 37667779
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagta 387  Q
    ||||||||||| |||||||||||||||||||| ||| ||||||||    
T  37667735 atattatttatctttgtatattaatagaaaaatatggtcaaagta 37667779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 342 - 398
Target Start/End: Original strand, 40250735 - 40250791
Alignment:
Q  342 aatattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaa 398  Q
    |||||||||||||||||||||||| || ||||| | | ||||| |||||||||||||    
T  40250735 aatattatttatatttgtatattagtataaaaataaggtcaaactatgtcaagtcaa 40250791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 398
Target Start/End: Complemental strand, 7738921 - 7738866
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaa 398  Q
    ||||||||||| |||||| |||| |||||||  ||| |||||||||||||||||||    
T  7738921 atattatttatctttgtaaattagtagaaaagtatggtcaaagtatgtcaagtcaa 7738866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 398
Target Start/End: Complemental strand, 18360075 - 18360020
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaa 398  Q
    ||||||||||| |||||  |||| |||||||| || ||||||||||||||||||||    
T  18360075 atattatttatctttgtgaattagtagaaaaatataatcaaagtatgtcaagtcaa 18360020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 344 - 391
Target Start/End: Original strand, 25678472 - 25678519
Alignment:
Q  344 tattatttatatttgtatattaatagaaaaacatgatcaaagtatgtc 391  Q
    |||||||||| |||| ||||||||||||||| ||||||||| ||||||    
T  25678472 tattatttatctttgaatattaatagaaaaatatgatcaaaatatgtc 25678519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 398
Target Start/End: Original strand, 36602853 - 36602908
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaa 398  Q
    ||||||||||| |||||  |||| |||||||| || ||||||||||||||||||||    
T  36602853 atattatttatctttgtgaattagtagaaaaatataatcaaagtatgtcaagtcaa 36602908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 255
Target Start/End: Complemental strand, 3442604 - 3442546
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||||||||||  | |||||||| |||| |||| ||||||| ||||||||||||||    
T  3442604 actccctccgtccctaaataaatgacatagttgactctgacacacataccaatgcatat 3442546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 255
Target Start/End: Original strand, 5735272 - 5735330
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||||||||||  | ||||||| ||||| |||| ||||||| ||||||||||||||    
T  5735272 actccctccgtccctaaataaatgatctagttgactctgacacacataccaatgcatat 5735330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 255
Target Start/End: Complemental strand, 6923200 - 6923142
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||||||||  ||||||||||| ||||| ||||| ||||||  |||||||||||||    
T  6923200 actccctccgtcttatattaaatgatctagttgacttcgacacacgtaccaatgcatat 6923142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 205 - 255
Target Start/End: Original strand, 14958017 - 14958067
Alignment:
Q  205 cgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    |||| ||||||| |||||||||| |||| ||||||| ||||||||||||||    
T  14958017 cgtctcatattagatgacctagttgactctgacacacataccaatgcatat 14958067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 259
Target Start/End: Complemental strand, 19170799 - 19170737
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatatattt 259  Q
    |||| |||||||||  | || |||||||||| ||||| ||||||| |||||||||||||||||    
T  19170799 actcgctccgtccctcaatagatgacctagttgacttcgacacatgtaccaatgcatatattt 19170737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 201 - 259
Target Start/End: Complemental strand, 20678843 - 20678785
Alignment:
Q  201 cctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatatattt 259  Q
    ||||||||||  | ||||||| ||||| |||| ||||||||||| ||||||||||||||    
T  20678843 cctccgtccctaaataaatgatctagttgactctgacacatatatcaatgcatatattt 20678785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 259
Target Start/End: Original strand, 23255936 - 23255998
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatatattt 259  Q
    ||||||||||||||  | || |||||||||| |||| |||||||  |||||||||||||||||    
T  23255936 actccctccgtccctcaatagatgacctagttgactctgacacacgtaccaatgcatatattt 23255998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 255
Target Start/End: Original strand, 28166275 - 28166333
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||||||||||  | ||||||| ||||| |||| ||||||| ||||||||||||||    
T  28166275 actccctccgtccctaaataaatgatctagttgactctgacacacataccaatgcatat 28166333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 255
Target Start/End: Complemental strand, 45198600 - 45198542
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||||||||||  | ||||||| ||||| |||| ||||||| ||||||||||||||    
T  45198600 actccctccgtccctaaataaatgatctagttgactctgacacacataccaatgcatat 45198542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 255
Target Start/End: Original strand, 47579288 - 47579346
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||||||||||  | ||||||||||||| |||| | ||||| ||||||||||||||    
T  47579288 actccctccgtccctaaataaatgacctagttgactcttacacacataccaatgcatat 47579346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 343 - 405
Target Start/End: Original strand, 47834105 - 47834167
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaaataca 405  Q
    ||||||||||| ||||||||||| |||||||| ||| |||||||| || | ||||||| ||||    
T  47834105 atattatttatctttgtatattagtagaaaaatatggtcaaagtaagttatgtcaaaattaca 47834167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 344 - 402
Target Start/End: Complemental strand, 48380574 - 48380516
Alignment:
Q  344 tattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaaat 402  Q
    |||||||||| ||||||||||| |||||||| ||| |||||||| || | |||||||||    
T  48380574 tattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaaat 48380516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 400
Target Start/End: Original strand, 8525377 - 8525434
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaa 400  Q
    |||||||||||  |||||||||| |||||||| |||||||||||| || | |||||||    
T  8525377 atattatttatccttgtatattagtagaaaaatatgatcaaagtaagttaggtcaaaa 8525434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 388
Target Start/End: Original strand, 14958158 - 14958203
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtat 388  Q
    ||||||||||| ||||||||||| |||||||| ||| |||||||||    
T  14958158 atattatttatttttgtatattagtagaaaaatatggtcaaagtat 14958203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 384
Target Start/End: Complemental strand, 27976672 - 27976631
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaa 384  Q
    ||||||||||| |||||||||||||| ||||| |||||||||    
T  27976672 atattatttatctttgtatattaataaaaaaatatgatcaaa 27976631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 198 - 255
Target Start/End: Original strand, 28151993 - 28152050
Alignment:
Q  198 ctccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||||||||   | ||||||||||||| |||| ||||||| ||||||||||||||    
T  28151993 ctccctccgtccttaaataaatgacctagttgactctgacacacataccaatgcatat 28152050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 400
Target Start/End: Complemental strand, 31152763 - 31152706
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaa 400  Q
    ||||||||||| ||||||||||| |||||||| ||| |||||||| || | |||||||    
T  31152763 atattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaa 31152706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 198 - 255
Target Start/End: Original strand, 31486288 - 31486345
Alignment:
Q  198 ctccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    |||||| |||||||||||| |||||||||| |||| | ||||| |||| |||||||||    
T  31486288 ctcccttcgtcccatattagatgacctagttgactctaacacacatactaatgcatat 31486345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 400
Target Start/End: Complemental strand, 43447267 - 43447210
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaa 400  Q
    ||||||||||| ||||||||||| |||||||| ||| |||||||| || | |||||||    
T  43447267 atattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaa 43447210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 342 - 374
Target Start/End: Original strand, 1348742 - 1348774
Alignment:
Q  342 aatattatttatatttgtatattaatagaaaaa 374  Q
    |||||||||||||||||||||||| ||||||||    
T  1348742 aatattatttatatttgtatattagtagaaaaa 1348774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 343 - 387
Target Start/End: Original strand, 1613179 - 1613223
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagta 387  Q
    ||||||||||| ||||||||||| |||||||| ||| ||||||||    
T  1613179 atattatttatctttgtatattagtagaaaaatatggtcaaagta 1613223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 343 - 403
Target Start/End: Complemental strand, 19170641 - 19170581
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaaata 403  Q
    ||||||||||| |||||  |||| |||||||| ||| |||||||| |||||||||| ||||    
T  19170641 atattatttatctttgtgaattagtagaaaaatatggtcaaagtacgtcaagtcaataata 19170581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 20423106 - 20423062
Alignment:
Q  17 gagagagaagaaaggtgaaatacagaggaggaggaaggagaaggg 61  Q
    ||||||||||||||||||||  | ||| |||||||||||||||||    
T  20423106 gagagagaagaaaggtgaaaaccggagaaggaggaaggagaaggg 20423062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 343 - 387
Target Start/End: Complemental strand, 29424748 - 29424704
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagta 387  Q
    ||||||||||| ||| |||||||||||||||| |||| |||||||    
T  29424748 atattatttatctttctatattaatagaaaaatatgagcaaagta 29424704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 343 - 387
Target Start/End: Complemental strand, 43047489 - 43047445
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagta 387  Q
    ||||||||||| ||||||||||| |||||||| ||| ||||||||    
T  43047489 atattatttatctttgtatattagtagaaaaatatggtcaaagta 43047445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 343 - 387
Target Start/End: Complemental strand, 50685022 - 50684978
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagta 387  Q
    ||||||||||| ||| ||||||| |||||||| ||||||||||||    
T  50685022 atattatttatctttatatattagtagaaaaatatgatcaaagta 50684978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 343 - 387
Target Start/End: Original strand, 53987741 - 53987785
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagta 387  Q
    ||||||||||| ||||||||||| |||||||| ||| ||||||||    
T  53987741 atattatttatctttgtatattagtagaaaaatatggtcaaagta 53987785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 3e-24; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 10470190 - 10470117
Alignment:
Q  85 agaagggaaaataatcatgtacaattaattttatatgaagcttttaatctgatccgtacaatttgatctaatgg 158  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||| |||||||||    
T  10470190 agaagggaaaataatcatgtgcaatcaattttatatgaagcttttaatctgatccgttcaatttaatctaatgg 10470117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 43511162 - 43511089
Alignment:
Q  85 agaagggaaaataatcatgtacaattaattttatatgaagcttttaatctgatccgtacaatttgatctaatgg 158  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  43511162 agaagggaaaataatcatgtgcaatcaattttatatgaagcttttaatcagatccgttcaatttgatctaatgg 43511089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 343 - 400
Target Start/End: Complemental strand, 14057810 - 14057753
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaa 400  Q
    ||||||||||| |||||||||||||||||||| |||||||||||| || | |||||||    
T  14057810 atattatttatctttgtatattaatagaaaaatatgatcaaagtaagttaggtcaaaa 14057753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 442
Target Start/End: Original strand, 33402553 - 33402652
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaaatacaactaattaaacaagtcatctaatatgggagggaggga 442  Q
    ||||||||||| ||||||||||| |||||||| |||||||||||| || | ||||||| ||||  |  |||||||  ||||||| || |||| |||||||    
T  33402553 atattatttatctttgtatattagtagaaaaatatgatcaaagtaagttaggtcaaaattacacatttttaaacagatcatctattacgggacggaggga 33402652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 197 - 255
Target Start/End: Original strand, 970139 - 970197
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    |||||||||||| |||||||||||| ||||| ||||| ||||||  |||||||||||||    
T  970139 actccctccgtctcatattaaatgatctagttgacttcgacacacgtaccaatgcatat 970197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 197 - 255
Target Start/End: Original strand, 23988580 - 23988638
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||||||||||  | ||||||||||||| |||| ||||||| ||||||||||||||    
T  23988580 actccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatat 23988638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 197 - 259
Target Start/End: Complemental strand, 25946357 - 25946295
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatatattt 259  Q
    ||||||||||||||||||||| |||| |||| |||| || |||||||| ||||| ||||||||    
T  25946357 actccctccgtcccatattaagtgacatagttgactctgtcacatatatcaatgtatatattt 25946295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 197 - 255
Target Start/End: Complemental strand, 35448257 - 35448199
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||||||||||  | ||||||||||||| |||| ||||||| ||||||||||||||    
T  35448257 actccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatat 35448199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 197 - 255
Target Start/End: Original strand, 39405765 - 39405823
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||||||||||||||||||||| ||||| ||||| || |||  |||||||||||||    
T  39405765 actccctccgtcccatattaaatgatctagttgacttcgagacacgtaccaatgcatat 39405823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 201 - 255
Target Start/End: Original strand, 43067234 - 43067288
Alignment:
Q  201 cctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||||||||||||||||| ||||| ||||| ||||||  |||||||||||||    
T  43067234 cctccgtcccatattaaatgatctagttgacttcgacacacgtaccaatgcatat 43067288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 343 - 387
Target Start/End: Original strand, 31191139 - 31191183
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagta 387  Q
    ||||||||||| |||||||||||||||||||| ||| ||||||||    
T  31191139 atattatttatctttgtatattaatagaaaaatatggtcaaagta 31191183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 343 - 403
Target Start/End: Complemental strand, 43517162 - 43517102
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaaata 403  Q
    ||||||||||| |||||  |||| |||||||  ||||||||||||||||||||||| ||||    
T  43517162 atattatttatctttgtgaattagtagaaaagtatgatcaaagtatgtcaagtcaataata 43517102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 374
Target Start/End: Complemental strand, 967294 - 967263
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaa 374  Q
    ||||||||||||||||||||||||||||||||    
T  967294 atattatttatatttgtatattaatagaaaaa 967263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 398
Target Start/End: Complemental strand, 5213024 - 5212969
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaa 398  Q
    ||||||||||| |||||| |||| |||||||  ||| |||||||||||||||||||    
T  5213024 atattatttatctttgtaaattagtagaaaagtatggtcaaagtatgtcaagtcaa 5212969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 196 - 255
Target Start/End: Original strand, 5364420 - 5364479
Alignment:
Q  196 cactccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    |||||||||||||||  | ||| ||||||||| |||| ||||||| ||||||||||||||    
T  5364420 cactccctccgtccctaaataagtgacctagttgactctgacacacataccaatgcatat 5364479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 398
Target Start/End: Original strand, 21961386 - 21961441
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaa 398  Q
    ||||||||||| ||| ||||||| |||| ||| ||| |||||||||||||||||||    
T  21961386 atattatttatttttatatattagtagataaatatggtcaaagtatgtcaagtcaa 21961441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 402
Target Start/End: Complemental strand, 35641871 - 35641812
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaaat 402  Q
    ||||||||||| ||| ||||||| |||||||| ||| |||||||||||||  ||||||||    
T  35641871 atattatttatctttatatattagtagaaaaatatggtcaaagtatgtcagatcaaaaat 35641812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 201 - 255
Target Start/End: Complemental strand, 4300088 - 4300034
Alignment:
Q  201 cctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    |||||||| |||||||||||| ||||| ||||| ||||||  |||||||||||||    
T  4300088 cctccgtctcatattaaatgatctagttgacttcgacacacgtaccaatgcatat 4300034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 255
Target Start/End: Original strand, 16048084 - 16048142
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    |||| ||||||||||||| |||||| ||||| ||||| ||||||  |||||||||||||    
T  16048084 actctctccgtcccatatcaaatgatctagttgacttcgacacacgtaccaatgcatat 16048142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 255
Target Start/End: Complemental strand, 22613969 - 22613911
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||| |||||||| |||||||| ||||| ||||| ||||||  |||||||||||||    
T  22613969 actcccttcgtcccatgttaaatgatctagttgacttagacacacgtaccaatgcatat 22613911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 255
Target Start/End: Original strand, 29627269 - 29627327
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||||||||||  | ||||||||||||| |||| ||||||| ||| ||||||||||    
T  29627269 actccctccgtccctaaataaatgacctagttgactctgacacacatatcaatgcatat 29627327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 343 - 405
Target Start/End: Complemental strand, 30788307 - 30788245
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaaataca 405  Q
    ||||||||||| ||||||||||| |||||||| ||| |||||||| || | ||||||| ||||    
T  30788307 atattatttatctttgtatattagtagaaaaatatggtcaaagtaagttatgtcaaaattaca 30788245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 255
Target Start/End: Complemental strand, 32334900 - 32334842
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    |||||||| |||||  | ||||||||||||| |||| ||||||| ||||||||||||||    
T  32334900 actccctctgtccctaaataaatgacctagttgactctgacacacataccaatgcatat 32334842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 259
Target Start/End: Original strand, 35290287 - 35290349
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatatattt 259  Q
    ||||||||||||||  | || |||||||||| |||| |||||||  |||||||||||||||||    
T  35290287 actccctccgtccctcaatagatgacctagttgactctgacacacgtaccaatgcatatattt 35290349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 255
Target Start/End: Original strand, 38697964 - 38698022
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||||||||||  | ||||||||||| | |||| ||||||| ||||||||||||||    
T  38697964 actccctccgtccctaaataaatgacctaattgactctgacacacataccaatgcatat 38698022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 255
Target Start/End: Complemental strand, 40512940 - 40512882
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||||||||||  | ||| ||||||||| |||| ||||||| ||||||||||||||    
T  40512940 actccctccgtccctaaataagtgacctagttgactctgacacacataccaatgcatat 40512882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 255
Target Start/End: Original strand, 42148308 - 42148366
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||||||||||  | ||||||| ||||| |||| ||||||| ||||||||||||||    
T  42148308 actccctccgtccctaaataaatgatctagttgactctgacacacataccaatgcatat 42148366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 400
Target Start/End: Complemental strand, 1098277 - 1098220
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaa 400  Q
    ||||||||||| ||||||||||| |||||||| ||| |||||||| || | |||||||    
T  1098277 atattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaa 1098220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 400
Target Start/End: Complemental strand, 13548315 - 13548258
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaa 400  Q
    ||||||||||| ||||||||||| |||||||| ||| |||||||| || | |||||||    
T  13548315 atattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaa 13548258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 400
Target Start/End: Complemental strand, 20022962 - 20022905
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaa 400  Q
    ||||||||||| ||||||||||| |||||||| ||| |||||||| || | |||||||    
T  20022962 atattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaa 20022905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 400
Target Start/End: Original strand, 20040377 - 20040434
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaa 400  Q
    ||||||||||| ||||||||||| |||||||| ||| |||||||| || | |||||||    
T  20040377 atattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaa 20040434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 384
Target Start/End: Original strand, 30721647 - 30721688
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaa 384  Q
    ||||||||||| |||||||||||||||||||| ||| |||||    
T  30721647 atattatttatctttgtatattaatagaaaaatatggtcaaa 30721688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 400
Target Start/End: Original strand, 41263091 - 41263148
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaa 400  Q
    ||||||||||| ||||||||||| |||||||| ||| |||||||| || | |||||||    
T  41263091 atattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaa 41263148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 343 - 387
Target Start/End: Original strand, 1781107 - 1781151
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagta 387  Q
    ||||||||||| ||||||||||| |||||||| ||| ||||||||    
T  1781107 atattatttatctttgtatattagtagaaaaatatggtcaaagta 1781151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 342 - 374
Target Start/End: Original strand, 4152271 - 4152303
Alignment:
Q  342 aatattatttatatttgtatattaatagaaaaa 374  Q
    |||||||||||||||||||||||| ||||||||    
T  4152271 aatattatttatatttgtatattagtagaaaaa 4152303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 10470228 - 10470184
Alignment:
Q  17 gagagagaagaaaggtgaaatacagaggaggaggaaggagaaggg 61  Q
    |||||||||||||||| |||  ||||| |||||||||||||||||    
T  10470228 gagagagaagaaaggtaaaaaccagagaaggaggaaggagaaggg 10470184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 343 - 387
Target Start/End: Complemental strand, 27675642 - 27675598
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagta 387  Q
    ||||||||||| | ||||||||| |||||||| ||||||||||||    
T  27675642 atattatttatctatgtatattagtagaaaaatatgatcaaagta 27675598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 343 - 387
Target Start/End: Complemental strand, 28143030 - 28142986
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagta 387  Q
    ||||||||||| ||||||||||| |||||||| ||| ||||||||    
T  28143030 atattatttatctttgtatattagtagaaaaatatggtcaaagta 28142986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 343 - 387
Target Start/End: Original strand, 30211703 - 30211747
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagta 387  Q
    ||||||||||| ||||||||||| |||||||| ||| ||||||||    
T  30211703 atattatttatctttgtatattagtagaaaaatatggtcaaagta 30211747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 342 - 398
Target Start/End: Original strand, 35290444 - 35290500
Alignment:
Q  342 aatattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaa 398  Q
    |||||||||||| |||||  |||| |||||||| ||| |||||||||| ||||||||    
T  35290444 aatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgacaagtcaa 35290500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 8e-22; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 87 - 156
Target Start/End: Original strand, 45432883 - 45432952
Alignment:
Q  87 aagggaaaataatcatgtacaattaattttatatgaagcttttaatctgatccgtacaatttgatctaat 156  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||||||| | ||||||||||||||    
T  45432883 aagggaaaataatcatgtgcaatcaattttatatgaagcttttaatctgatccattcaatttgatctaat 45432952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 343 - 434
Target Start/End: Original strand, 40348566 - 40348657
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaaatacaactaattaaacaagtcatctaatatggga 434  Q
    ||||||||||| ||||||||||| |||||||| ||| ||||| ||||||| ||||||| | ||| |  ||||||| ||||||||||| ||||    
T  40348566 atattatttatctttgtatattagtagaaaaatatggtcaaaatatgtcaggtcaaaagtgcaaattgttaaacaggtcatctaataaggga 40348657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 197 - 255
Target Start/End: Original strand, 2400286 - 2400344
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||||||||||  | ||||||||||||| |||| ||||||||||||||||||||||    
T  2400286 actccctccgtccctaaataaatgacctagttgactctgacacatataccaatgcatat 2400344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 197 - 255
Target Start/End: Complemental strand, 10464375 - 10464317
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    |||||||||||||||||||||||||  |||| ||||||||||||  |||||||||||||    
T  10464375 actccctccgtcccatattaaatgatatagttgactttgacacacgtaccaatgcatat 10464317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 197 - 255
Target Start/End: Complemental strand, 34478271 - 34478213
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||||||||||||||||||| ||||||| ||||| ||||||  |||||||||||||    
T  34478271 actccctccgtcccatattaaataacctagttgacttcgacacacgtaccaatgcatat 34478213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 197 - 255
Target Start/End: Complemental strand, 37231824 - 37231766
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||||||||||||||||||||| ||||| ||||| ||||||  |||||||||||||    
T  37231824 actccctccgtcccatattaaatgatctagttgacttcgacacacgtaccaatgcatat 37231766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 197 - 255
Target Start/End: Complemental strand, 35501007 - 35500949
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||||||||||||||||||||| |||||  |||| ||||||  |||||||||||||    
T  35501007 actccctccgtcccatattaaatgatctagttaacttcgacacacgtaccaatgcatat 35500949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 197 - 255
Target Start/End: Original strand, 36819697 - 36819755
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||||||||||  | ||||||||||||| |||| ||||||| ||||||||||||||    
T  36819697 actccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatat 36819755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 343 - 384
Target Start/End: Complemental strand, 40089642 - 40089601
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaa 384  Q
    |||||||||||||||||||||||||||||||| ||| |||||    
T  40089642 atattatttatatttgtatattaatagaaaaatatggtcaaa 40089601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 398
Target Start/End: Complemental strand, 3680450 - 3680395
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaa 398  Q
    ||||||||||||||||||||||| || ||||| | | ||||| |||||||||||||    
T  3680450 atattatttatatttgtatattagtataaaaataaggtcaaaatatgtcaagtcaa 3680395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 398
Target Start/End: Complemental strand, 31466460 - 31466405
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaa 398  Q
    ||||||||||| |||||| |||| |||||||  ||| |||||||||||||||||||    
T  31466460 atattatttatctttgtaaattagtagaaaagtatggtcaaagtatgtcaagtcaa 31466405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 390
Target Start/End: Complemental strand, 42493619 - 42493572
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgt 390  Q
    ||||||||||| ||||||||||| |||||||| ||| |||||||||||    
T  42493619 atattatttatctttgtatattagtagaaaaatatggtcaaagtatgt 42493572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 398
Target Start/End: Original strand, 46657792 - 46657847
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaa 398  Q
    ||||||||||| |||||| ||||||||||||| ||| |||||| |||| |||||||    
T  46657792 atattatttatctttgtaaattaatagaaaaatatggtcaaagaatgttaagtcaa 46657847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 398
Target Start/End: Complemental strand, 47713604 - 47713549
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaa 398  Q
    ||||||||||| |||||  |||| |||||||| ||| |||||||||||||||||||    
T  47713604 atattatttatctttgtgaattagtagaaaaatatggtcaaagtatgtcaagtcaa 47713549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 398
Target Start/End: Original strand, 48531481 - 48531536
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaa 398  Q
    ||||||||||| |||||  |||| |||||||| ||| |||||||||||||||||||    
T  48531481 atattatttatctttgtgaattagtagaaaaatatggtcaaagtatgtcaagtcaa 48531536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 259
Target Start/End: Complemental strand, 4612347 - 4612285
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatatattt 259  Q
    ||||||| ||||||  | ||||||||| ||| |||| ||||||| ||||||||||||||||||    
T  4612347 actccctacgtccctaaataaatgacccagttgactctgacacaaataccaatgcatatattt 4612285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 344 - 390
Target Start/End: Original strand, 7314308 - 7314354
Alignment:
Q  344 tattatttatatttgtatattaatagaaaaacatgatcaaagtatgt 390  Q
    |||||||||| ||||||||||| |||||||| ||| |||||||||||    
T  7314308 tattatttatctttgtatattagtagaaaaatatggtcaaagtatgt 7314354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 343 - 405
Target Start/End: Original strand, 9173298 - 9173360
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaaataca 405  Q
    ||||||||||| ||||||||||| |||||||| ||| |||||||| || | ||||||| ||||    
T  9173298 atattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattaca 9173360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 255
Target Start/End: Original strand, 19072770 - 19072828
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||||||||||  | ||||||||||||| || | ||||||| ||||||||||||||    
T  19072770 actccctccgtccctaaataaatgacctagttgattctgacacacataccaatgcatat 19072828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 255
Target Start/End: Complemental strand, 28185668 - 28185610
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||||||||||  | ||||||||||||| |||| ||||||| |||||||| |||||    
T  28185668 actccctccgtccctaaataaatgacctagttgactctgacacacataccaatacatat 28185610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 343 - 405
Target Start/End: Original strand, 37100988 - 37101050
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaaataca 405  Q
    ||||||||| | |||||||||||||||||||| ||| |||||||| || | ||||||| ||||    
T  37100988 atattatttttctttgtatattaatagaaaaatatggtcaaagtaagttaggtcaaaattaca 37101050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 343 - 393
Target Start/End: Original strand, 38498776 - 38498826
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaa 393  Q
    ||||||||||| ||||||||||| |||||||| ||| ||||| ||||||||    
T  38498776 atattatttatttttgtatattagtagaaaaatatggtcaaaatatgtcaa 38498826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 255
Target Start/End: Complemental strand, 42086898 - 42086840
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||||| ||||  | ||||||||||||| |||| ||||||| ||||||||||||||    
T  42086898 actccctccatccctaaataaatgacctagttgactctgacacacataccaatgcatat 42086840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 255
Target Start/End: Original strand, 47080981 - 47081039
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||||||||||  | | ||||||||||| |||| ||||||| ||||||||||||||    
T  47080981 actccctccgtccctaaatgaatgacctagttgactctgacacacataccaatgcatat 47081039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 255
Target Start/End: Complemental strand, 47713762 - 47713704
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||||||||||  | ||| ||||||||| |||| ||||||| ||||||||||||||    
T  47713762 actccctccgtccctaaataagtgacctagttgactctgacacacataccaatgcatat 47713704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 255
Target Start/End: Complemental strand, 47713839 - 47713781
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||||||||||  | ||| ||||||||| |||| ||||||| ||||||||||||||    
T  47713839 actccctccgtccctaaataagtgacctagttgactctgacacacataccaatgcatat 47713781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 400
Target Start/End: Original strand, 16807108 - 16807165
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaa 400  Q
    ||||||||||| ||||||||||| |||||||| ||| |||||||| || | |||||||    
T  16807108 atattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaa 16807165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 400
Target Start/End: Original strand, 30462183 - 30462240
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaa 400  Q
    ||||||||||| ||||||||||| || ||||| ||| |||||||| || |||||||||    
T  30462183 atattatttatctttgtatattagtaaaaaaatatggtcaaagtaagttaagtcaaaa 30462240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 400
Target Start/End: Original strand, 31496607 - 31496664
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaa 400  Q
    ||||||||||| |||||||||||||||||||| | | |||||||| || | |||||||    
T  31496607 atattatttatctttgtatattaatagaaaaatacggtcaaagtaagttaggtcaaaa 31496664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 400
Target Start/End: Complemental strand, 38069153 - 38069096
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaa 400  Q
    ||||||||||| ||||||||||| |||||||| ||| |||||||| || | |||||||    
T  38069153 atattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaa 38069096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 343 - 403
Target Start/End: Complemental strand, 18795242 - 18795182
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaaata 403  Q
    ||||||||||| |||||  |||| |||||||| ||| ||||||||||| ||||||| ||||    
T  18795242 atattatttatctttgtgaattagtagaaaaatatggtcaaagtatgttaagtcaataata 18795182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 343 - 395
Target Start/End: Original strand, 21392177 - 21392229
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagt 395  Q
    ||||||||||| |||||  |||| |||||||| ||| ||||||||||||||||    
T  21392177 atattatttatctttgtgaattagtagaaaaatatggtcaaagtatgtcaagt 21392229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 343 - 387
Target Start/End: Original strand, 26651171 - 26651215
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagta 387  Q
    ||||||||||| ||||||||||| |||||||| ||| ||||||||    
T  26651171 atattatttatctttgtatattagtagaaaaatatggtcaaagta 26651215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 343 - 387
Target Start/End: Complemental strand, 28016217 - 28016173
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagta 387  Q
    ||||||||||| ||||||||||| |||||||| ||| ||||||||    
T  28016217 atattatttatctttgtatattagtagaaaaatatggtcaaagta 28016173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 343 - 387
Target Start/End: Complemental strand, 32222652 - 32222608
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagta 387  Q
    ||||||||||| |||||||||||||||||||| | ||| ||||||    
T  32222652 atattatttatctttgtatattaatagaaaaatacgattaaagta 32222608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 126 - 200
Target Start/End: Original strand, 32498370 - 32498441
Alignment:
Q  126 ttttaatctgatccgtacaatttgatctaatggatactattatttaatcttctcaccctctcataataatcactc 200  Q
    ||||||||||  ||||||| |||||||||||||   |||||||| | |  ||||||||||||||||||| |||||    
T  32498370 ttttaatctgtaccgtacactttgatctaatgg---ctattattcagtactctcaccctctcataataaccactc 32498441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 45432843 - 45432887
Alignment:
Q  17 gagagagaagaaaggtgaaatacagaggaggaggaaggagaaggg 61  Q
    ||||||||||||||||||||  ||||| ||||||||||| |||||    
T  45432843 gagagagaagaaaggtgaaaaccagagaaggaggaaggataaggg 45432887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 8e-22; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 34238656 - 34238729
Alignment:
Q  85 agaagggaaaataatcatgtacaattaattttatatgaagcttttaatctgatccgtacaatttgatctaatgg 158  Q
    |||||||||||||||||||| | || |||||||||||||||||||||| |||||||| ||||||||||||||||    
T  34238656 agaagggaaaataatcatgtgctatcaattttatatgaagcttttaatttgatccgttcaatttgatctaatgg 34238729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 78 - 158
Target Start/End: Complemental strand, 41768934 - 41768855
Alignment:
Q  78 aataaaaagaagggaaaataatcatgtacaattaattttatatgaagcttttaatctgatccgtacaatttgatctaatgg 158  Q
    ||||||||||||| |||||||| |||| |||||||||||||| ||||||||||||| ||||| ||||||||||||||||||    
T  41768934 aataaaaagaagg-aaaataataatgtgcaattaattttatacgaagcttttaatccgatccatacaatttgatctaatgg 41768855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 343 - 442
Target Start/End: Complemental strand, 27668060 - 27667961
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaaatacaactaattaaacaagtcatctaatatgggagggaggga 442  Q
    ||||||||||| |||| |||||| |||||||| ||| ||||||||||||||||||||| ||||| |  | ||||||||||||||||| |||| |||||||    
T  27668060 atattatttatctttgcatattactagaaaaatatggtcaaagtatgtcaagtcaaaattacaaattgtcaaacaagtcatctaataagggatggaggga 27667961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 109 - 158
Target Start/End: Original strand, 41770454 - 41770503
Alignment:
Q  109 ttaattttatatgaagcttttaatctgatccgtacaatttgatctaatgg 158  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  41770454 ttaattttatatgaagcttttaatctgatccatacaatttgatctgatgg 41770503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 197 - 255
Target Start/End: Original strand, 40598129 - 40598187
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||||||||||||||||||||| ||||| ||||| ||||||  |||||||||||||    
T  40598129 actccctccgtcccatattaaatgatctagttgacttcgacacacgtaccaatgcatat 40598187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 343 - 405
Target Start/End: Original strand, 43409444 - 43409506
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaaataca 405  Q
    ||||||||||| |||||||||||||||||||| ||| ||||||||| ||| ||||| ||||||    
T  43409444 atattatttatctttgtatattaatagaaaaatatggtcaaagtatatcaggtcaataataca 43409506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 343 - 405
Target Start/End: Complemental strand, 2831809 - 2831747
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaaataca 405  Q
    ||||||||||||||||||||||| |||||||| ||| |||||||| || | ||||||| ||||    
T  2831809 atattatttatatttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattaca 2831747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 197 - 255
Target Start/End: Original strand, 14372078 - 14372136
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||||||||||  | ||||||||||||| |||| ||||||| ||||||||||||||    
T  14372078 actccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatat 14372136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 197 - 255
Target Start/End: Original strand, 23671377 - 23671435
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||||||||||  | ||||||||||||| |||| ||||||| ||||||||||||||    
T  23671377 actccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatat 23671435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 342 - 403
Target Start/End: Original strand, 38963677 - 38963738
Alignment:
Q  342 aatattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaaata 403  Q
    |||||||||||| |||||  |||| |||||||| |||||||||||| |||||||||| ||||    
T  38963677 aatattatttatctttgtgaattagtagaaaaatatgatcaaagtacgtcaagtcaataata 38963738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 199 - 255
Target Start/End: Complemental strand, 14707792 - 14707736
Alignment:
Q  199 tccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||||||||  | ||||||||||||| |||| ||||||| ||||||||||||||    
T  14707792 tccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatat 14707736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 34238618 - 34238662
Alignment:
Q  17 gagagagaagaaaggtgaaatacagaggaggaggaaggagaaggg 61  Q
    ||||||||||||||||||||  ||||| |||||||||||||||||    
T  34238618 gagagagaagaaaggtgaaaaccagagaaggaggaaggagaaggg 34238662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 343 - 387
Target Start/End: Complemental strand, 41575664 - 41575620
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagta 387  Q
    ||||||||||||| ||||||||| |||||||| ||||||||||||    
T  41575664 atattatttatatatgtatattagtagaaaaatatgatcaaagta 41575620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 400
Target Start/End: Complemental strand, 6075225 - 6075170
Alignment:
Q  345 attatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaa 400  Q
    ||||||||| |||||||||||||||||||| ||| |||||||| || || ||||||    
T  6075225 attatttatctttgtatattaatagaaaaatatggtcaaagtaagttaaatcaaaa 6075170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 405
Target Start/End: Complemental strand, 37806885 - 37806822
Alignment:
Q  342 aatattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaaataca 405  Q
    |||||||||||| ||||||||||| |||||||| ||| | ||| ||||||| ||||| ||||||    
T  37806885 aatattatttatctttgtatattagtagaaaaatatggttaaaatatgtcaggtcaacaataca 37806822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 117
Target Start/End: Original strand, 41769693 - 41769767
Alignment:
Q  40 agaggaggaggaaggagaaggggtaacggggagaaaccaataaaaagaagggaaaataatcatgtacaattaatttta 117  Q
    |||||| || ||| ||||| | |||||||||||||    ||||||||||||||||||||| |||| ||||||||||||    
T  41769693 agaggaagaagaaagagaaagagtaacggggagaag---ataaaaagaagggaaaataattatgtgcaattaatttta 41769767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 188 - 255
Target Start/End: Original strand, 42038516 - 42038582
Alignment:
Q  188 ataataatcactccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    |||||||| ||||||||||||||  | ||| ||||||||| |||| ||||||| ||||||||||||||    
T  42038516 ataataat-actccctccgtccctaaataagtgacctagttgactctgacacacataccaatgcatat 42038582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 398
Target Start/End: Complemental strand, 43925176 - 43925121
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaa 398  Q
    ||||||||||| |||||  |||| |||||||| ||||||||||||||| |||||||    
T  43925176 atattatttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaa 43925121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 343 - 401
Target Start/End: Complemental strand, 5030386 - 5030328
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaaa 401  Q
    ||||||||||| ||||||||||| || ||||| | |||||||||||||||  |||||||    
T  5030386 atattatttatctttgtatattagtataaaaatacgatcaaagtatgtcagatcaaaaa 5030328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 343 - 405
Target Start/End: Original strand, 16127741 - 16127803
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaaataca 405  Q
    ||||||||||| ||||||||||| | |||||| |||||||||||| || | ||||||| ||||    
T  16127741 atattatttatctttgtatattagtggaaaaatatgatcaaagtaagttaggtcaaaattaca 16127803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 255
Target Start/End: Original strand, 18718240 - 18718298
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||||||||||  | ||||||||||||| |||| ||||||| ||| ||||||||||    
T  18718240 actccctccgtccctaaataaatgacctagttgactctgacacacatatcaatgcatat 18718298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 255
Target Start/End: Original strand, 34826913 - 34826971
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||||||||||  | ||||||||||||| |||| ||||||| |||| |||||||||    
T  34826913 actccctccgtccctaaataaatgacctagttgactctgacacacatactaatgcatat 34826971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 255
Target Start/End: Complemental strand, 40425509 - 40425451
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||||||||||  | ||||||||||||| || | ||||||| ||||||||||||||    
T  40425509 actccctccgtccctaaataaatgacctagttgattctgacacacataccaatgcatat 40425451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 255
Target Start/End: Complemental strand, 41173017 - 41172959
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||||||||||  | ||||||||||| | |||| ||||||| ||||||||||||||    
T  41173017 actccctccgtccctaaataaatgacctacttgactctgacacacataccaatgcatat 41172959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 259
Target Start/End: Complemental strand, 44283539 - 44283477
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatatattt 259  Q
    |||||||||||||   | ||||||||||||| || | ||||||| ||||||||||||||||||    
T  44283539 actccctccgtccttaaataaatgacctagttgattctgacacacataccaatgcatatattt 44283477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 384
Target Start/End: Complemental strand, 4137511 - 4137470
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaa 384  Q
    ||||||||||| ||||||||||| |||||||| |||||||||    
T  4137511 atattatttatctttgtatattagtagaaaaatatgatcaaa 4137470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 218 - 255
Target Start/End: Complemental strand, 5030510 - 5030473
Alignment:
Q  218 atgacctagtagactttgacacatataccaatgcatat 255  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  5030510 atgacctagttgactttgacacacataccaatgcatat 5030473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 400
Target Start/End: Original strand, 7724572 - 7724629
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaa 400  Q
    ||||||||||| ||||||||||| |||||||| ||| |||||||| || | |||||||    
T  7724572 atattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaa 7724629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 400
Target Start/End: Complemental strand, 8373536 - 8373479
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaa 400  Q
    ||||||||||| ||||||||||| |||||||| ||| |||||||| || | |||||||    
T  8373536 atattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaa 8373479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 400
Target Start/End: Complemental strand, 8896373 - 8896316
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaa 400  Q
    ||||||||||| ||||||||||| |||||||| ||| |||||||| || | |||||||    
T  8896373 atattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaa 8896316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 400
Target Start/End: Complemental strand, 12209091 - 12209034
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaa 400  Q
    ||||||||||| ||||||||||| |||||||| ||| |||||||| || | |||||||    
T  12209091 atattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaa 12209034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 400
Target Start/End: Original strand, 31603377 - 31603434
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaa 400  Q
    ||||||||||||||||||||||| |||||||| ||  |||||||| || | |||||||    
T  31603377 atattatttatatttgtatattagtagaaaaatattgtcaaagtaagttaggtcaaaa 31603434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 400
Target Start/End: Original strand, 32776166 - 32776223
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaa 400  Q
    ||||||||||| ||||||||||| |||||||| |||   ||||||||| |||||||||    
T  32776166 atattatttatctttgtatattagtagaaaaatatggctaaagtatgtaaagtcaaaa 32776223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 400
Target Start/End: Complemental strand, 38963897 - 38963840
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaa 400  Q
    ||||||||||| ||||||||||| |||||||| ||| |||||||| || | |||||||    
T  38963897 atattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaa 38963840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 400
Target Start/End: Complemental strand, 40471838 - 40471781
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaa 400  Q
    ||||||||||| ||||||||||| || ||||| ||||||||| || || |||||||||    
T  40471838 atattatttatctttgtatattagtaaaaaaatatgatcaaaataagttaagtcaaaa 40471781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 400
Target Start/End: Complemental strand, 41436934 - 41436877
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaa 400  Q
    ||||||||||| ||||||||||| |||||||| ||| |||||||| || | |||||||    
T  41436934 atattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaa 41436877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 342 - 387
Target Start/End: Original strand, 43328761 - 43328806
Alignment:
Q  342 aatattatttatatttgtatattaatagaaaaacatgatcaaagta 387  Q
    |||||||||||| ||||||||||| |||||||| ||| ||||||||    
T  43328761 aatattatttatctttgtatattagtagaaaaatatggtcaaagta 43328806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 344 - 392
Target Start/End: Complemental strand, 19192759 - 19192711
Alignment:
Q  344 tattatttatatttgtatattaatagaaaaacatgatcaaagtatgtca 392  Q
    |||||||||| |||||||||||| | |||||||| |||||| |||||||    
T  19192759 tattatttatctttgtatattaacaaaaaaacataatcaaaatatgtca 19192711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 342 - 390
Target Start/End: Original strand, 23873232 - 23873280
Alignment:
Q  342 aatattatttatatttgtatattaatagaaaaacatgatcaaagtatgt 390  Q
    |||||||||||| |||||||||||  ||||||||||  |||||||||||    
T  23873232 aatattatttatctttgtatattacgagaaaaacatagtcaaagtatgt 23873280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 343 - 387
Target Start/End: Original strand, 37987897 - 37987941
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagta 387  Q
    ||||||||||| ||||||||||| || ||||| ||||||||||||    
T  37987897 atattatttatctttgtatattagtaaaaaaatatgatcaaagta 37987941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 215 - 255
Target Start/End: Original strand, 44330403 - 44330443
Alignment:
Q  215 taaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||||||||| |||| ||||||| ||||||||||||||    
T  44330403 taaatgacctagttgactctgacacacataccaatgcatat 44330443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 5e-17; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 42294210 - 42294283
Alignment:
Q  85 agaagggaaaataatcatgtacaattaattttatatgaagcttttaatctgatccgtacaatttgatctaatgg 158  Q
    |||||| ||||||||||||| |||| |||||||||| |||||||||||||||| ||  ||||||||||||||||    
T  42294210 agaaggaaaaataatcatgtgcaatcaattttatataaagcttttaatctgattcgctcaatttgatctaatgg 42294283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 197 - 259
Target Start/End: Original strand, 11854525 - 11854587
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatatattt 259  Q
    |||||||||||||||||||||| || ||||| ||||| ||||||  |||||||||||||||||    
T  11854525 actccctccgtcccatattaaacgatctagttgacttcgacacacgtaccaatgcatatattt 11854587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 197 - 255
Target Start/End: Original strand, 40013652 - 40013710
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    |||||||||||||| || ||||||||||||| |||| ||||||| ||||||||||||||    
T  40013652 actccctccgtcccttaataaatgacctagttgactctgacacacataccaatgcatat 40013710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 343 - 400
Target Start/End: Original strand, 42786057 - 42786114
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaa 400  Q
    ||||||||||| |||||||||||||||||||| ||| ||||| | |||||||||||||    
T  42786057 atattatttatctttgtatattaatagaaaaatatggtcaaaatgtgtcaagtcaaaa 42786114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 343 - 431
Target Start/End: Complemental strand, 26628004 - 26627916
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaaatacaactaattaaacaagtcatctaatatg 431  Q
    ||||||||||| |||||||||||||||||||| ||  ||||  ||||||| || |||||||||  |  | |||||||||||||||||||    
T  26628004 atattatttatctttgtatattaatagaaaaatatagtcaacatatgtcaggttaaaaatacacattgtcaaacaagtcatctaatatg 26627916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 398
Target Start/End: Complemental strand, 8350982 - 8350927
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaa 398  Q
    ||||||||||| ||| || ||||||||||||| ||| |||||||||||||||||||    
T  8350982 atattatttatctttctaaattaatagaaaaatatggtcaaagtatgtcaagtcaa 8350927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 398
Target Start/End: Original strand, 25256492 - 25256547
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaa 398  Q
    ||||||||||| |||||| |||| |||||||| ||||||||||||||| |||||||    
T  25256492 atattatttatctttgtaaattagtagaaaaatatgatcaaagtatgttaagtcaa 25256547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 197 - 255
Target Start/End: Complemental strand, 3293362 - 3293304
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||||||||||  | ||||||| ||||| |||| ||||||||||||||||||||||    
T  3293362 actccctccgtccctaaataaatgatctagttgactctgacacatataccaatgcatat 3293304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 197 - 255
Target Start/End: Original strand, 29790943 - 29791001
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||||||||||  | ||||||||||||| |||| ||||||| ||||||||||||||    
T  29790943 actccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatat 29791001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 343 - 405
Target Start/End: Complemental strand, 38842265 - 38842203
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaaataca 405  Q
    ||||||||||| ||||||||||| |||||||| |||||||||||| || | ||||||| ||||    
T  38842265 atattatttatctttgtatattagtagaaaaatatgatcaaagtaagttaggtcaaaattaca 38842203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 197 - 255
Target Start/End: Original strand, 38845201 - 38845259
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||||||||||  | ||||||||||||| |||| ||||||| ||||||||||||||    
T  38845201 actccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatat 38845259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 343 - 384
Target Start/End: Original strand, 35584133 - 35584174
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaa 384  Q
    ||||||||||| |||||||||||||||||||| |||||||||    
T  35584133 atattatttatctttgtatattaatagaaaaatatgatcaaa 35584174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 343 - 387
Target Start/End: Original strand, 4327078 - 4327122
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagta 387  Q
    ||||||||||| ||||||||||| |||||||| ||||||||||||    
T  4327078 atattatttatctttgtatattagtagaaaaatatgatcaaagta 4327122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 342 - 398
Target Start/End: Original strand, 10658135 - 10658191
Alignment:
Q  342 aatattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaa 398  Q
    ||||||||||||||||||  |||| |||||||| ||| ||||||||||| |||||||    
T  10658135 aatattatttatatttgttaattagtagaaaaatatggtcaaagtatgttaagtcaa 10658191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 343 - 387
Target Start/End: Complemental strand, 15870277 - 15870233
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagta 387  Q
    ||||||||||| ||||||||||| |||||||| ||||||||||||    
T  15870277 atattatttatttttgtatattagtagaaaaatatgatcaaagta 15870233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 400
Target Start/End: Complemental strand, 40645710 - 40645654
Alignment:
Q  344 tattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaa 400  Q
    |||||||||| ||||||||||| |||||||| |||||||||||| || | |||||||    
T  40645710 tattatttatctttgtatattagtagaaaaatatgatcaaagtaagttaggtcaaaa 40645654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 398
Target Start/End: Original strand, 12893687 - 12893742
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaa 398  Q
    ||||||||||| |||||| ||| ||||||||| ||| ||||||||||| |||||||    
T  12893687 atattatttatctttgtaaattgatagaaaaatatggtcaaagtatgttaagtcaa 12893742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 398
Target Start/End: Original strand, 40013810 - 40013865
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaa 398  Q
    |||||||||||||||||  ||||||| ||||  ||| |||||||||||||||||||    
T  40013810 atattatttatatttgtgaattaatataaaagtatggtcaaagtatgtcaagtcaa 40013865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 259
Target Start/End: Complemental strand, 1581025 - 1580963
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatatattt 259  Q
    ||||||||||||||  | ||||||||||||| |||| |||||||  || ||||||||||||||    
T  1581025 actccctccgtccctgaataaatgacctagttgactctgacacacgtatcaatgcatatattt 1580963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 255
Target Start/End: Original strand, 18809277 - 18809335
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||||| ||||||||||||||| ||||| || || ||||||  |||||||||||||    
T  18809277 actccctccatcccatattaaatgatctagttgagttcgacacacgtaccaatgcatat 18809335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 343 - 405
Target Start/End: Complemental strand, 20671358 - 20671296
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaaataca 405  Q
    ||||||||||| ||||||||||| |||||||| ||| |||||||| || | ||||||| ||||    
T  20671358 atattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattaca 20671296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 255
Target Start/End: Original strand, 30289925 - 30289983
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||||||||||  | ||||||||||||| |||| ||||| | ||||||||||||||    
T  30289925 actccctccgtccctaaataaatgacctagttgactctgacatacataccaatgcatat 30289983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 255
Target Start/End: Original strand, 38739658 - 38739716
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    |||||||||||||   | ||||||||||||| |||| ||||||| ||||||||||||||    
T  38739658 actccctccgtccttaaataaatgacctagttgactctgacacacataccaatgcatat 38739716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 201 - 255
Target Start/End: Original strand, 43066132 - 43066186
Alignment:
Q  201 cctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||||||  | ||||||||||||| |||| ||||||| ||||||||||||||    
T  43066132 cctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatat 43066186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 255
Target Start/End: Original strand, 45081813 - 45081871
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||||||||||  | ||||| ||||||| |||| ||||||| ||||||||||||||    
T  45081813 actccctccgtccctaaataaataacctagttgactctgacacacataccaatgcatat 45081871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 400
Target Start/End: Original strand, 21132887 - 21132944
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaa 400  Q
    ||||||||| | ||||||||||| |||||||| ||| |||||||| || |||||||||    
T  21132887 atattatttttctttgtatattagtagaaaaatatggtcaaagtaagttaagtcaaaa 21132944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 342 - 387
Target Start/End: Complemental strand, 23547171 - 23547126
Alignment:
Q  342 aatattatttatatttgtatattaatagaaaaacatgatcaaagta 387  Q
    |||||||||||| ||||||||||| |||||||| || |||||||||    
T  23547171 aatattatttatctttgtatattagtagaaaaatattatcaaagta 23547126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 400
Target Start/End: Original strand, 25691556 - 25691613
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaa 400  Q
    ||||||||||| ||||||||||| |||||||| ||| |||||||| || | |||||||    
T  25691556 atattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaa 25691613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 400
Target Start/End: Complemental strand, 30464534 - 30464477
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaa 400  Q
    ||||||||||| ||||||||||| |||||||| ||| |||||||| || | |||||||    
T  30464534 atattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaa 30464477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 400
Target Start/End: Original strand, 43184738 - 43184795
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaa 400  Q
    ||||||||||| ||||||||||| |||||||| ||| |||||||| || | |||||||    
T  43184738 atattatttatttttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaa 43184795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 384
Target Start/End: Complemental strand, 44039927 - 44039886
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaa 384  Q
    ||||||||||| ||||||||||| |||||||| |||||||||    
T  44039927 atattatttatctttgtatattagtagaaaaatatgatcaaa 44039886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 400
Target Start/End: Original strand, 44887674 - 44887731
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaa 400  Q
    ||||||||||| ||||||||||| |||||||| ||| ||||| || |||| |||||||    
T  44887674 atattatttatctttgtatattagtagaaaaatatggtcaaactaagtcaggtcaaaa 44887731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 343 - 387
Target Start/End: Complemental strand, 761652 - 761608
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagta 387  Q
    |||||||||| |||||||||||| |||||||| ||| ||||||||    
T  761652 atattatttaaatttgtatattagtagaaaaatatggtcaaagta 761608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 2805745 - 2805678
Alignment:
Q  187 cataataatcactccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||||| ||||||||||||||  | ||||||||| ||| |||| ||||| | ||||||||||||||    
T  2805745 cataataat-actccctccgtccctaaataaatgacccagttgactctgacatacataccaatgcatat 2805678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 343 - 387
Target Start/End: Complemental strand, 17523907 - 17523863
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagta 387  Q
    ||||||||||| |||||||||||  ||||||| ||||||||||||    
T  17523907 atattatttatctttgtatattagcagaaaaatatgatcaaagta 17523863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 343 - 387
Target Start/End: Complemental strand, 25009246 - 25009202
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagta 387  Q
    ||||||||||| ||||||||||| |||||||| ||| ||||||||    
T  25009246 atattatttatctttgtatattagtagaaaaatatggtcaaagta 25009202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 343 - 387
Target Start/End: Original strand, 29616285 - 29616329
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagta 387  Q
    ||||||||||| ||||||||||| |||| ||| ||||||||||||    
T  29616285 atattatttatctttgtatattagtagacaaatatgatcaaagta 29616329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 343 - 387
Target Start/End: Complemental strand, 30653462 - 30653418
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagta 387  Q
    ||||||||||| ||||||||||| |||||||| ||| ||||||||    
T  30653462 atattatttatctttgtatattagtagaaaaatatggtcaaagta 30653418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 343 - 403
Target Start/End: Complemental strand, 31127907 - 31127847
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaaata 403  Q
    ||||||||||| |||||  |||| |||||||| ||||||||||||| | ||||||| ||||    
T  31127907 atattatttatctttgtgaattagtagaaaaatatgatcaaagtatattaagtcaataata 31127847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 343 - 387
Target Start/End: Complemental strand, 44947119 - 44947075
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagta 387  Q
    ||||||||||| || ||||||||||||||||| || |||||||||    
T  44947119 atattatttatcttagtatattaatagaaaaatataatcaaagta 44947075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 7e-16; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 343 - 430
Target Start/End: Original strand, 12869380 - 12869467
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaaatacaactaattaaacaagtcatctaatat 430  Q
    ||||||||||| ||||||||||| |||||||| ||| ||||| ||||||||||||||| ||||| | || ||| | ||||||||||||    
T  12869380 atattatttatctttgtatattagtagaaaaatatggtcaaactatgtcaagtcaaaagtacaaattatcaaataggtcatctaatat 12869467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 343 - 400
Target Start/End: Complemental strand, 19788680 - 19788623
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaa 400  Q
    ||||||||||||||||||||||| |||||||| ||| | ||||||||||| |||||||    
T  19788680 atattatttatatttgtatattagtagaaaaatatggttaaagtatgtcaggtcaaaa 19788623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 442
Target Start/End: Complemental strand, 16434645 - 16434546
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaaatacaactaattaaacaagtcatctaatatgggagggaggga 442  Q
    ||||||||||| ||||||||||| | |||||| ||| |||||||||||||  |||||| | ||| |    |||||| ||||||||||||||| |||||||    
T  16434645 atattatttatctttgtatattagtggaaaaatatggtcaaagtatgtcagatcaaaagtgcaaattgccaaacaaatcatctaatatgggacggaggga 16434546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 353 - 400
Target Start/End: Complemental strand, 34500965 - 34500918
Alignment:
Q  353 tatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaa 400  Q
    ||||||||||||| |||||||| ||||||||||||||||| |||||||    
T  34500965 tatttgtatattagtagaaaaatatgatcaaagtatgtcaggtcaaaa 34500918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 197 - 255
Target Start/End: Complemental strand, 643691 - 643633
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||||||||||  | ||||||||||||| |||| ||||||| ||||||||||||||    
T  643691 actccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatat 643633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 189 - 255
Target Start/End: Original strand, 11114558 - 11114624
Alignment:
Q  189 taataatcactccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||| ||||||||||||||  | ||||||||||||| || | ||||||| ||||||||||||||    
T  11114558 taataattactccctccgtccctcaataaatgacctagttgattctgacacacataccaatgcatat 11114624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 197 - 255
Target Start/End: Original strand, 33121543 - 33121601
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    |||||||||||||| || ||||||||||||| ||||| ||||||  |||||||||||||    
T  33121543 actccctccgtcccttaataaatgacctagttgacttcgacacacgtaccaatgcatat 33121601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 343 - 400
Target Start/End: Complemental strand, 2141670 - 2141613
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaa 400  Q
    ||||||||||| ||||||||||| |||||||| |||||||||||| || | |||||||    
T  2141670 atattatttatctttgtatattagtagaaaaatatgatcaaagtaagttaggtcaaaa 2141613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 343 - 400
Target Start/End: Original strand, 6142473 - 6142530
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaa 400  Q
    ||||||||||| ||||||||||| |||||||| |||||||||||| || | |||||||    
T  6142473 atattatttatctttgtatattagtagaaaaatatgatcaaagtaagttaggtcaaaa 6142530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 343 - 400
Target Start/End: Complemental strand, 9022942 - 9022885
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaa 400  Q
    ||||||||||| ||||||||||| |||||||| ||| ||||||||||| | |||||||    
T  9022942 atattatttatttttgtatattagtagaaaaatatggtcaaagtatgttaggtcaaaa 9022885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 343 - 400
Target Start/End: Complemental strand, 16969480 - 16969423
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaa 400  Q
    ||||||||||||||||||||||| |||||||| ||| ||||||||  | |||||||||    
T  16969480 atattatttatatttgtatattagtagaaaaatatggtcaaagtaaattaagtcaaaa 16969423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 343 - 400
Target Start/End: Original strand, 29514992 - 29515049
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaa 400  Q
    ||||||||||| ||||||||||| |||||||| |||||||||||| || | |||||||    
T  29514992 atattatttatctttgtatattagtagaaaaatatgatcaaagtaagttaggtcaaaa 29515049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 215 - 259
Target Start/End: Original strand, 24150760 - 24150804
Alignment:
Q  215 taaatgacctagtagactttgacacatataccaatgcatatattt 259  Q
    ||||||||||||| |||| ||||||| ||||||||||||||||||    
T  24150760 taaatgacctagttgactctgacacacataccaatgcatatattt 24150804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 398
Target Start/End: Complemental strand, 16696118 - 16696063
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaa 398  Q
    ||||||||||| |||||  |||| |||||||| ||| |||||||||||||||||||    
T  16696118 atattatttatctttgtgaattagtagaaaaatatggtcaaagtatgtcaagtcaa 16696063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 398
Target Start/End: Original strand, 18992062 - 18992117
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaa 398  Q
    ||||||||||| |||||| |||| |||||||  ||| |||||||||||||||||||    
T  18992062 atattatttatctttgtaaattagtagaaaagtatggtcaaagtatgtcaagtcaa 18992117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 255
Target Start/End: Complemental strand, 16434788 - 16434730
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    |||||||||||||||||||| |||| ||||| ||||  |||||  ||||||||||||||    
T  16434788 actccctccgtcccatattagatgaactagttgactcagacactcataccaatgcatat 16434730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 343 - 405
Target Start/End: Complemental strand, 30699363 - 30699301
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaaataca 405  Q
    ||||||||||| ||||||||||| |||||||| ||| |||||||| || | ||||||| ||||    
T  30699363 atattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattaca 30699301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 400
Target Start/End: Original strand, 17496284 - 17496341
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaa 400  Q
    ||||||||||| ||||||||||| |||||||| ||| |||||||| || | |||||||    
T  17496284 atattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaa 17496341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 400
Target Start/End: Complemental strand, 19762373 - 19762316
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaa 400  Q
    ||||||||||||||||||||||| || ||||| ||| | ||| ||||||| |||||||    
T  19762373 atattatttatatttgtatattagtaaaaaaatatggttaaactatgtcaggtcaaaa 19762316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 400
Target Start/End: Original strand, 24798512 - 24798569
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaa 400  Q
    ||||||||||| ||||||||||| |||||||| ||| |||||||| || | |||||||    
T  24798512 atattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaa 24798569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 400
Target Start/End: Complemental strand, 24825267 - 24825210
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaa 400  Q
    ||||||||||| ||||||||||| |||||||| ||| |||||||| || | |||||||    
T  24825267 atattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaa 24825210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 343 - 387
Target Start/End: Complemental strand, 2397872 - 2397828
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagta 387  Q
    ||||||||||| ||||||||||| |||||||| ||| ||||||||    
T  2397872 atattatttatctttgtatattagtagaaaaatatggtcaaagta 2397828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 343 - 387
Target Start/End: Original strand, 4890092 - 4890136
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagta 387  Q
    ||||||||||| ||||||||||| |||||||| ||| ||||||||    
T  4890092 atattatttatctttgtatattagtagaaaaatatggtcaaagta 4890136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 215 - 255
Target Start/End: Original strand, 22020295 - 22020335
Alignment:
Q  215 taaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||||||||| |||| ||||||| ||||||||||||||    
T  22020295 taaatgacctagttgactctgacacacataccaatgcatat 22020335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 343 - 387
Target Start/End: Original strand, 32541443 - 32541487
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagta 387  Q
    ||||||||||| ||||||||||| |||||||| ||| ||||||||    
T  32541443 atattatttatctttgtatattagtagaaaaatatggtcaaagta 32541487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 344 - 402
Target Start/End: Complemental strand, 31698684 - 31698626
Alignment:
Q  344 tattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaaat 402  Q
    |||||||||| |||||||||||||| ||||| |||||||||||||||||| | ||||||    
T  31698684 tattatttatctttgtatattaataaaaaaatatgatcaaagtatgtcaaattaaaaat 31698626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 341 - 386
Target Start/End: Original strand, 37515494 - 37515539
Alignment:
Q  341 aaatattatttatatttgtatattaatagaaaaacatgatcaaagt 386  Q
    |||||||||| || ||||||||||||||||||||||||||||||||    
T  37515494 aaatattattgatctttgtatattaatagaaaaacatgatcaaagt 37515539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 199 - 255
Target Start/End: Original strand, 16266165 - 16266221
Alignment:
Q  199 tccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||||||||||||||||||| ||||| ||||| ||||||  |||||||||||||    
T  16266165 tccctccgtcccatattaaatgatctagttgacttcgacacacgtaccaatgcatat 16266221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 398
Target Start/End: Original strand, 52163609 - 52163665
Alignment:
Q  342 aatattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaa 398  Q
    |||||||||||||||| ||||||| || ||||| ||||||||||||||||| |||||    
T  52163609 aatattatttatatttatatattagtaaaaaaatatgatcaaagtatgtcatgtcaa 52163665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 197 - 255
Target Start/End: Complemental strand, 3898831 - 3898773
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||||||||||||||||||||| ||||| ||||| |||| |  |||||||||||||    
T  3898831 actccctccgtcccatattaaatgatctagttgacttcgacagacgtaccaatgcatat 3898773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 197 - 255
Target Start/End: Original strand, 16265034 - 16265092
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    |||||||||||| |||||||||||| ||||| ||||| ||||||  |||||||||||||    
T  16265034 actccctccgtctcatattaaatgatctagttgacttcgacacacgtaccaatgcatat 16265092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 197 - 255
Target Start/End: Original strand, 24982352 - 24982410
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    |||||||||||| |||||||||||| ||||| ||||| ||||||  |||||||||||||    
T  24982352 actccctccgtctcatattaaatgatctagttgacttcgacacacgtaccaatgcatat 24982410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 197 - 255
Target Start/End: Original strand, 25531779 - 25531837
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||||||||||  | ||||||||||||| |||| ||||||| ||||||||||||||    
T  25531779 actccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatat 25531837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 197 - 255
Target Start/End: Original strand, 26441638 - 26441696
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||||||| ||||||||||||| ||||| ||||| ||||||  |||||||||||||    
T  26441638 actccctccgttccatattaaatgatctagttgacttcgacacacgtaccaatgcatat 26441696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 347 - 405
Target Start/End: Original strand, 27581039 - 27581097
Alignment:
Q  347 tatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaaataca 405  Q
    ||||||| ||||||||||| |||||||| ||||||||||||||| | ||||||| ||||    
T  27581039 tatttatctttgtatattattagaaaaatatgatcaaagtatgttaggtcaaaattaca 27581097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 197 - 255
Target Start/End: Original strand, 43680070 - 43680128
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||||||||||||||||||||| ||||| ||||| |||||   |||||||||||||    
T  43680070 actccctccgtcccatattaaatgatctagttgacttcgacacgcgtaccaatgcatat 43680128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 197 - 255
Target Start/End: Complemental strand, 48219902 - 48219844
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||||||||||  | ||||||||||||| |||| ||||||| ||||||||||||||    
T  48219902 actccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatat 48219844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 197 - 255
Target Start/End: Complemental strand, 48265071 - 48265013
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||||||||||  | ||||||||||||| |||| ||||||| ||||||||||||||    
T  48265071 actccctccgtccctaaataaatgacctagttgactctgacacacataccaatgcatat 48265013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 197 - 255
Target Start/End: Original strand, 50876365 - 50876423
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||||||||||  | ||||||||||||| |||| | ||||||||||||||||||||    
T  50876365 actccctccgtccctaaataaatgacctagttgactctaacacatataccaatgcatat 50876423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 343 - 400
Target Start/End: Original strand, 30005773 - 30005830
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaa 400  Q
    ||||||||||| ||||||||||| |||||||| ||||| ||||||||| | |||||||    
T  30005773 atattatttatttttgtatattagtagaaaaatatgattaaagtatgtaatgtcaaaa 30005830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 97 - 158
Target Start/End: Original strand, 44769510 - 44769571
Alignment:
Q  97 aatcatgtacaattaattttatatgaagcttttaatctgatccgtacaatttgatctaatgg 158  Q
    ||||||||  ||||||||| ||||| |||||| ||||||| ||| |||||||||||||||||    
T  44769510 aatcatgtgtaattaatttaatatggagctttaaatctgacccgcacaatttgatctaatgg 44769571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 343 - 387
Target Start/End: Original strand, 2138995 - 2139039
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagta 387  Q
    ||||||||||| ||||||||||| |||||||| ||||||||||||    
T  2138995 atattatttatctttgtatattagtagaaaaatatgatcaaagta 2139039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 343 - 387
Target Start/End: Original strand, 31932144 - 31932188
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagta 387  Q
    ||||||||||||||||||||||| |||||||| ||| ||||||||    
T  31932144 atattatttatatttgtatattagtagaaaaatatggtcaaagta 31932188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 343 - 387
Target Start/End: Complemental strand, 36035788 - 36035744
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagta 387  Q
    ||||||||||| ||||||||||| |||||||| ||||||||||||    
T  36035788 atattatttatctttgtatattagtagaaaaatatgatcaaagta 36035744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 343 - 387
Target Start/End: Original strand, 49903651 - 49903695
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagta 387  Q
    ||||||||||| ||||||||||| |||||||| ||||||||||||    
T  49903651 atattatttatctttgtatattagtagaaaaatatgatcaaagta 49903695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 402
Target Start/End: Original strand, 50295902 - 50295961
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaaat 402  Q
    ||||||||||| |||||||||||  ||||||| |||  |||||||||||| |||||||||    
T  50295902 atattatttatctttgtatattagcagaaaaatatgggcaaagtatgtcaggtcaaaaat 50295961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 400
Target Start/End: Complemental strand, 10124212 - 10124154
Alignment:
Q  342 aatattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaa 400  Q
    |||||||||||| ||||||||||| |||||||| ||| |||||||| || | |||||||    
T  10124212 aatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaa 10124154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 255
Target Start/End: Complemental strand, 16751713 - 16751655
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||||||| |||||||| |||||||||| ||||  ||||||  |||||||||||||    
T  16751713 actccctccgttccatattagatgacctagttgactccgacacacgtaccaatgcatat 16751655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 163 - 201
Target Start/End: Complemental strand, 19534122 - 19534084
Alignment:
Q  163 tattatttaatcttctcaccctctcataataatcactcc 201  Q
    ||||||||| || ||||||||||||||||||||||||||    
T  19534122 tattatttactcctctcaccctctcataataatcactcc 19534084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 400
Target Start/End: Complemental strand, 26543971 - 26543913
Alignment:
Q  342 aatattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaa 400  Q
    |||||||||||| ||||||||||| |||||||| ||| |||||||| || | |||||||    
T  26543971 aatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaa 26543913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 255
Target Start/End: Complemental strand, 30529310 - 30529252
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||||||||||  | ||||||||||||| |||| |||||||  |||||||||||||    
T  30529310 actccctccgtccctcaataaatgacctagttgactctgacacaagtaccaatgcatat 30529252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 255
Target Start/End: Complemental strand, 32988609 - 32988551
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    |||||||||||| |  | ||||||||||||| |||| ||||||| ||||||||||||||    
T  32988609 actccctccgtctctaaataaatgacctagttgactctgacacacataccaatgcatat 32988551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 255
Target Start/End: Complemental strand, 39354524 - 39354466
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||| ||||||  | ||||||||||||| |||| ||||||| ||||||||||||||    
T  39354524 actccctacgtccctaaataaatgacctagttgactctgacacacataccaatgcatat 39354466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 343 - 405
Target Start/End: Original strand, 43453131 - 43453193
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaaataca 405  Q
    ||||||||||| |||||||||||||||||||| ||| ||||| || || | ||||||| ||||    
T  43453131 atattatttatctttgtatattaatagaaaaatatggtcaaaataagttaggtcaaaattaca 43453193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 201 - 255
Target Start/End: Original strand, 47222219 - 47222273
Alignment:
Q  201 cctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||| ||||||||||||||||||||| ||||  ||||||  |||||||||||||    
T  47222219 cctccatcccatattaaatgacctagttgactccgacacacgtaccaatgcatat 47222273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 255
Target Start/End: Original strand, 50539261 - 50539319
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||||||||||  | ||||||| ||||| |||| ||||||| ||||||||||||||    
T  50539261 actccctccgtccctaaataaatgatctagttgactctgacacacataccaatgcatat 50539319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 255
Target Start/End: Original strand, 52378990 - 52379048
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||||||||||  | ||||||| ||||| |||| ||||||| ||||||||||||||    
T  52378990 actccctccgtccctaaataaatgatctagttgactctgacacacataccaatgcatat 52379048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 400
Target Start/End: Original strand, 1821594 - 1821651
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaa 400  Q
    ||||||||||| ||||||||||||| |||||| ||| |||||||| || | |||||||    
T  1821594 atattatttatctttgtatattaatggaaaaatatggtcaaagtaagttaggtcaaaa 1821651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 392
Target Start/End: Complemental strand, 3555306 - 3555257
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtca 392  Q
    ||||||||||| ||||||||||| |||||||| ||  |||||||||||||    
T  3555306 atattatttatctttgtatattagtagaaaaatatattcaaagtatgtca 3555257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 400
Target Start/End: Original strand, 10100479 - 10100536
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaa 400  Q
    ||||||||||| ||||||||||| |||||||| ||| |||||||| || | |||||||    
T  10100479 atattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaa 10100536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 347 - 400
Target Start/End: Complemental strand, 40883509 - 40883456
Alignment:
Q  347 tatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaa 400  Q
    ||||||||||||||||||| | |||||| |||||||||||| || | |||||||    
T  40883509 tatttatatttgtatattagttgaaaaatatgatcaaagtaagttaggtcaaaa 40883456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 49805515 - 49805454
Alignment:
Q  194 atcactccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    |||||||||||||||||  | ||||||| ||||| |||| ||||| | ||||||||||||||    
T  49805515 atcactccctccgtccctaaataaatgatctagttgactctgacaaacataccaatgcatat 49805454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 343 - 387
Target Start/End: Original strand, 6017415 - 6017459
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagta 387  Q
    ||||||||||| ||||||||||| |||||||| ||| ||||||||    
T  6017415 atattatttatctttgtatattagtagaaaaatatggtcaaagta 6017459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 343 - 387
Target Start/End: Original strand, 7075296 - 7075340
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagta 387  Q
    ||||||||||| ||||||||||| |||||||| ||| ||||||||    
T  7075296 atattatttatctttgtatattagtagaaaaatatggtcaaagta 7075340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 199 - 255
Target Start/End: Original strand, 14075738 - 14075794
Alignment:
Q  199 tccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    |||||||||||||||||| |||| | ||| ||||  |||||| ||||||||||||||    
T  14075738 tccctccgtcccatattagatgatcgagttgactccgacacacataccaatgcatat 14075794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 343 - 387
Target Start/End: Complemental strand, 23393334 - 23393290
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagta 387  Q
    ||||||||||||||||||||||| || ||||| ||| ||||||||    
T  23393334 atattatttatatttgtatattagtataaaaatatggtcaaagta 23393290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 343 - 403
Target Start/End: Complemental strand, 23569776 - 23569716
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaaata 403  Q
    ||||||||||| |||||  |||| |||||||| ||| |||||||| |||||||||| ||||    
T  23569776 atattatttatctttgtgaattagtagaaaaatatggtcaaagtacgtcaagtcaataata 23569716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 346 - 390
Target Start/End: Complemental strand, 27990814 - 27990770
Alignment:
Q  346 ttatttatatttgtatattaatagaaaaacatgatcaaagtatgt 390  Q
    |||||||| ||||||||||| |||||||| ||| |||||||||||    
T  27990814 ttatttatttttgtatattagtagaaaaatatggtcaaagtatgt 27990770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 343 - 403
Target Start/End: Original strand, 37281251 - 37281311
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaaata 403  Q
    ||||||||||| |||||  |||| |||||||  ||| ||||||||||||||||||| ||||    
T  37281251 atattatttatctttgtgaattagtagaaaagtatggtcaaagtatgtcaagtcaataata 37281311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 343 - 387
Target Start/End: Original strand, 38786912 - 38786956
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagta 387  Q
    ||||||||||| ||||||||||| | |||||| ||||||||||||    
T  38786912 atattatttatctttgtatattagttgaaaaatatgatcaaagta 38786956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 188 - 255
Target Start/End: Complemental strand, 41486 - 41419
Alignment:
Q  188 ataataatcactccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    |||| ||| ||||||||||||||  | ||||||||||||| |||| ||||||| ||||||||||||||    
T  41486 ataagaattactccctccgtccctcaataaatgacctagttgactctgacacacataccaatgcatat 41419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 398
Target Start/End: Original strand, 14218 - 14273
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaa 398  Q
    ||||||||||| |||||| |||| |||||||  ||| |||||||||||||||||||    
T  14218 atattatttatctttgtaaattagtagaaaagtatggtcaaagtatgtcaagtcaa 14273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1248 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold1248
Description:

Target: scaffold1248; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 343 - 405
Target Start/End: Original strand, 1418 - 1480
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaaataca 405  Q
    ||||||||||| ||||||||||| |||||||| ||| |||||||| || | ||||||| ||||    
T  1418 atattatttatttttgtatattagtagaaaaatatggtcaaagtaagttatgtcaaaattaca 1480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0952 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0952
Description:

Target: scaffold0952; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 343 - 405
Target Start/End: Complemental strand, 895 - 833
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaaataca 405  Q
    ||||||||||| ||||||||||| |||||||| ||| |||||||| || | ||||||| ||||    
T  895 atattatttatttttgtatattagtagaaaaatatggtcaaagtaagttatgtcaaaattaca 833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 384
Target Start/End: Original strand, 4149 - 4191
Alignment:
Q  342 aatattatttatatttgtatattaatagaaaaacatgatcaaa 384  Q
    |||||||||||| ||||||||||| |||||||| |||||||||    
T  4149 aatattatttatttttgtatattagtagaaaaatatgatcaaa 4191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 255
Target Start/End: Complemental strand, 44368 - 44310
Alignment:
Q  197 actccctccgtcccatattaaatgacctagtagactttgacacatataccaatgcatat 255  Q
    ||||||||||||||  | ||||||||||||| |||| ||||||  ||||||||||||||    
T  44368 actccctccgtccctaaataaatgacctagttgactctgacacgcataccaatgcatat 44310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 343 - 405
Target Start/End: Original strand, 117480 - 117542
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaaataca 405  Q
    ||||||||||| |||||  |||| |||||||| ||| ||||||||| ||||||||| ||||||    
T  117480 atattatttatctttgtgaattagtagaaaaatatggtcaaagtatatcaagtcaataataca 117542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 400
Target Start/End: Complemental strand, 5478 - 5421
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaa 400  Q
    ||||||||||| ||||||||||| |||||||| ||| |||||||| || | |||||||    
T  5478 atattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaa 5421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 400
Target Start/End: Complemental strand, 184068 - 184011
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagtatgtcaagtcaaaa 400  Q
    ||||||||||| ||||||||||| |||||||| ||| |||||||| || | |||||||    
T  184068 atattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaa 184011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0283 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0283
Description:

Target: scaffold0283; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 343 - 387
Target Start/End: Complemental strand, 3097 - 3053
Alignment:
Q  343 atattatttatatttgtatattaatagaaaaacatgatcaaagta 387  Q
    ||||||||||| || ||||||||||||||||| || |||||||||    
T  3097 atattatttatcttagtatattaatagaaaaatataatcaaagta 3053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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