View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14419_low_1 (Length: 1274)
Name: NF14419_low_1
Description: NF14419
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14419_low_1 |
 | |
|
| [»] scaffold0289 (6 HSPs) |
| | |
|
| [»] scaffold0400 (4 HSPs) |
| | |
|
| [»] scaffold0365 (4 HSPs) |
| | |
|
Alignment Details
Target: chr7 (Bit Score: 1202; Significance: 0; HSPs: 12)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 1202; E-Value: 0
Query Start/End: Original strand, 19 - 1264
Target Start/End: Original strand, 14605142 - 14606387
Alignment:
| Q |
19 |
tttcatttcctggaaactatctcactgggaaattaccaacagaaatgaacatgcttgtcaacttggatcgcctgctaatctatgataatgactttatcgg |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
14605142 |
tttcatttcctggaaactatctcactgggaaattaccaacagaaatgaacatgcttgtcaacttggatcgcctgctaatctatgataatgacttcatcgg |
14605241 |
T |
|
| Q |
119 |
tcagctgccgcacaacatttgcattggtgggaatttgaaatacttggctgttatgaataaccacttcacaggctcagttccaaagagtttgaagaattgc |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14605242 |
tcagctgccgcacaacatttgcattggtgggaatttgaaatacttggctgttatgaataaccacttcacaggctcagttccaaagagtttgaagaattgc |
14605341 |
T |
|
| Q |
219 |
tctagcattattaggattagacttgaacaaaaccaacttactggaaatataacagagattatagattttggagtatatccaaatttggtttacatgcaat |
318 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14605342 |
tctagcattattaggattagacttgaacaaaaccaacttactggaaatataacagagattatagattttggagtatatccaaatttggtttacatgcaat |
14605441 |
T |
|
| Q |
319 |
taagtcaaaacaatttttatggacacctttcatccaattggggaaagttccataatctgacaaccttcaatatttccaataataatatatcaggccatat |
418 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14605442 |
taagtcaaaacaatttttatggacacctttcatccaattggggaaagttccataatctgacaaccttcaatatttccaataataatatatcaggccatat |
14605541 |
T |
|
| Q |
419 |
accaccagaaataggaggggcacccattttgggttcacttgacttatcttcaaaccatctcacagggaaaattccgaaggagttaagcaacttatctttg |
518 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
14605542 |
accaccagaaataggaggggcacccattttgggttcacttgacttatcttcaaaccatctcacagggaaaattccgagggagttaagcaacttatctttg |
14605641 |
T |
|
| Q |
519 |
tccaatctcttgataagcaacaaccatctctcaggaaacattcctgtagaaatatcatccttagagcttgagaccttagaccttgcagaaaatgatctaa |
618 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14605642 |
tccaatctcttgataagcaacaaccatctctcaggaaacattcctgtagaaatatcatccttagagcttgagaccttagaccttgcagaaaatgatctaa |
14605741 |
T |
|
| Q |
619 |
gtggcttcatcacaaaacaacttgcaaatttgcctaaggtatggaacttaaatttgagccataacaaattcacaggaaatattcctattgaatttggaca |
718 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14605742 |
gtggcttcatcacaaaacaacttgcaaatttgcctaaggtatggaacttaaatttgagccataacaaattcacaggaaatattcctattgaatttggaca |
14605841 |
T |
|
| Q |
719 |
atttaatgtccttgaaatcctagatctcagtggaaattttttggatggaacaataccatcaatgcttacacagttgaaatacttggaaacattgaatatc |
818 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14605842 |
atttaatgtccttgaaatcctagatctcagtggaaattttttggatggaacaataccatcaatgcttacacagttgaaatacttggaaacattgaatatc |
14605941 |
T |
|
| Q |
819 |
tcacataataatctttctggttttattccctctagcttcgatcagatgttcagcttaacgtctgttgatatatcatataaccaattggagggtccactcc |
918 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14605942 |
tcacataataatctttctggttttattccctctagcttcgatcagatgttcagcttaacatctgttgatatatcatataaccaattggagggtccactcc |
14606041 |
T |
|
| Q |
919 |
ccaatattcgagctttcagcaacgctacaattgaagtggtgagaaataataaaggcttgtgtggtaatgtctctggcttagagcactgcccaacatcaag |
1018 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||||| |
|
|
| T |
14606042 |
ccaatattcgagctttcagcaacgctacaattgaagtggtgagaaataataaaggcttgtgtggtaatgtctctggcttagagccctgcctaatatcaag |
14606141 |
T |
|
| Q |
1019 |
catggaatctcatcatcatcatacgatgaaagtcttattgatagttttaccctttgtagctgttggaactctagttctagccttattttgcttcaaattc |
1118 |
Q |
| |
|
||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14606142 |
cattgaatctcatcatcatcattcgaagaaagtcttattgatagttttaccctttgtagctgttggaactctagttctagccttattttgcttcaaattc |
14606241 |
T |
|
| Q |
1119 |
tcacatcatctcttccaaagatcaaccaccaatgaaaatcaggttggagggaacatcattgtaccacaaaatgtacttacaatatggaactttgatggaa |
1218 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14606242 |
tcacatcatctcttccaaagatcaaccaccaatgaaaatcaggttggagggaacatcagtgtaccacaaaatgtacttacaatatggaactttgatggaa |
14606341 |
T |
|
| Q |
1219 |
aatttttgtatgagaatattttggaagccacagaagattttgatga |
1264 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
14606342 |
aatttttgtatgagaacattttggaagccacagaagattttgatga |
14606387 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 1004; E-Value: 0
Query Start/End: Original strand, 90 - 1264
Target Start/End: Original strand, 16024396 - 16025564
Alignment:
| Q |
90 |
ctgctaatctatgataatgactttatcggtcagctgccgcacaacatttgcattggtgggaatttgaaatacttggctgttatgaataaccacttcacag |
189 |
Q |
| |
|
|||| ||| |||| ||||||||| || ||||||||||| ||||||||||||||||||||||| |||||||||||||||| | |||||||||||||| | |
|
|
| T |
16024396 |
ctgcaaatgtatggtaatgacttcattggtcagctgcctcacaacatttgcattggtgggaaattgaaatacttggctgctcaaaataaccacttcactg |
16024495 |
T |
|
| Q |
190 |
gctcagttccaaagagtttgaagaattgctctagcattattaggattagacttgaacaaaaccaacttactggaaatataacagagattatagattttgg |
289 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||||||||||||||||| || ||| ||||| |
|
|
| T |
16024496 |
gccgcgttccaaagagtttgaagaattgctctagcattataagacttcgacttgaacaaaaccaacttactggaaatataaccga------agactttgg |
16024589 |
T |
|
| Q |
290 |
agtatatccaaatttggtttacatgcaattaagtcaaaacaatttttatggacacctttcatccaattggggaaagttccataatctgacaaccttcaat |
389 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| |
|
|
| T |
16024590 |
tgtatatccagatttggtttacatgcaattaagtcaaaacaatttttatggacacctttcatccaattgggaaaagttccataacctgacaaccttcaat |
16024689 |
T |
|
| Q |
390 |
atttccaataataatatatcaggccatataccaccagaaataggaggggcacccattttgggttcacttgacttatcttcaaaccatctcacagggaaaa |
489 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
16024690 |
atttccaataataatatatcaggccatataccaccagaaataggaggggcacccaatttgggttcacttgacttatcttcaaaccatctcacaggggaaa |
16024789 |
T |
|
| Q |
490 |
ttccgaaggagttaagcaacttatctttgtccaatctcttgataagcaacaaccatctctcaggaaacattcctgtagaaatatcatccttagagcttga |
589 |
Q |
| |
|
|||| |||||||||||||||||||||||||| || |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16024790 |
ttccaaaggagttaagcaacttatctttgtcaaacctcttgataagcaataaccatctctcaggaaacattcctgtagaaatatcatccttagagcttga |
16024889 |
T |
|
| Q |
590 |
gaccttagaccttgcagaaaatgatctaagtggcttcatcacaaaacaacttgcaaatttgcctaaggtatggaacttaaatttgagccataacaaattc |
689 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16024890 |
gaccttagaccttgcagaaaatgatctaagtggcttcatcacaaaacaacttgcaaatttgcctaaggtatggaacttaaatttgagccataacaaattc |
16024989 |
T |
|
| Q |
690 |
acaggaaatattcctattgaatttggacaatttaatgtccttgaaatcctagatctcagtggaaattttttggatggaacaataccatcaatgcttacac |
789 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16024990 |
acaggaaatattcctattgaatttggacaatttaatgtccttgaaatcctagatctcagtggaaattttttggatggaacaataccatcaatgcttacac |
16025089 |
T |
|
| Q |
790 |
agttgaaatacttggaaacattgaatatctcacataataatctttctggttttattccctctagcttcgatcagatgttcagcttaacgtctgttgatat |
889 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16025090 |
agttgaaatacttggaaacattgaatatctcacataataatctttctggttttattccctctagcttcgatcagatgttcagcttaacgtctgttgatat |
16025189 |
T |
|
| Q |
890 |
atcatataaccaattggagggtccactccccaatattcgagctttcagcaacgctacaattgaagtggtgagaaataataaaggcttgtgtggtaatgtc |
989 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16025190 |
atcatataaccaattggagggtccactccccaatattcgagctttcagcaacgctacaattgaagtggtgagaaataataaaggcttgtgtggtaatgtc |
16025289 |
T |
|
| Q |
990 |
tctggcttagagcactgcccaacatcaagcatggaatctcatcatcatcatacgatgaaagtcttattgatagttttaccctttgtagctgttggaactc |
1089 |
Q |
| |
|
||||||||||||| |||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16025290 |
tctggcttagagccctgcccaacatcaagcattgaatctcatcatcatcattcgaagaaagtcttattgatagttttaccctttgtagctgttggaactc |
16025389 |
T |
|
| Q |
1090 |
tagttctagccttattttgcttcaaattctcacatcatctcttccaaagatcaaccaccaatgaaaatcaggttggagggaacatcattgtaccacaaaa |
1189 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
16025390 |
tagttctagccttattttgcttcaaattctcacatcatctcttccaaagatcaaccaccaatgaaaatcaggttggagggaacatcagtgtaccacaaaa |
16025489 |
T |
|
| Q |
1190 |
tgtacttacaatatggaactttgatggaaaatttttgtatgagaatattttggaagccacagaagattttgatga |
1264 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
16025490 |
tgtacttacaatatggaactttgatggaaaatttttgtatgagaacattttggaagccacagaagattttgatga |
16025564 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 684; E-Value: 0
Query Start/End: Original strand, 101 - 1264
Target Start/End: Original strand, 16102208 - 16103372
Alignment:
| Q |
101 |
tgataatgactttatcggtcagctgccgcacaacatttgcattggtgggaatttgaaatacttggctgttatgaataaccacttcacaggctcagttcca |
200 |
Q |
| |
|
|||||||||||| || ||||||||||| || |||||||||||||||||||||||||||| |||| || | | |||||||||||||| ||| |||||| |
|
|
| T |
16102208 |
tgataatgacttcattggtcagctgcctcataacatttgcattggtgggaatttgaaatttttgggtgctctaaataaccacttcaccggccgagttcct |
16102307 |
T |
|
| Q |
201 |
aagagtttgaagaattgctctagcattattaggattagacttgaacaaaaccaacttactggaaatataacagagattatagattttggagtatatccaa |
300 |
Q |
| |
|
||||||||||||||||||||||||||||| || |||||||||| ||||||||||||||||||||||||||| | ||||||| | || ||||||| |
|
|
| T |
16102308 |
aagagtttgaagaattgctctagcattataagacttagacttgaccaaaaccaacttactggaaatataacaca------agattttagtgtttatccaa |
16102401 |
T |
|
| Q |
301 |
atttggtttacatgcaattaagtcaaaacaatttttatggacacctttcatccaattggggaaagttccataatctgacaaccttcaatatttccaataa |
400 |
Q |
| |
|
||||| |||||| | |||||| ||||||||||||| |||||||||||||| ||||||||||||| || || || |||| ||||| |||||| |||| |
|
|
| T |
16102402 |
atttgaattacatagacttaagtgaaaacaatttttacggacacctttcatcgaattggggaaagtgtcaaaacctaacaagcttcataatttcccataa |
16102501 |
T |
|
| Q |
401 |
taatatatcaggccatataccaccagaaataggaggggcacccattttgggttcacttgacttatcttcaaaccatctcacagggaaaattccgaaggag |
500 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16102502 |
taatatatcaggtcatataccaccagaaataggaagggcacccaatttgggtatacttgacttatcttcaaaccatctcacagggaaaattccgaaggag |
16102601 |
T |
|
| Q |
501 |
ttaagcaacttatctttgtccaatctcttgataagcaacaaccatctctcaggaaacattcctgtagaaatatcatccttaga---gcttgagaccttag |
597 |
Q |
| |
|
||||||||||| ||||||||||| || ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| |||||||| ||||| |
|
|
| T |
16102602 |
ttaagcaacttgtctttgtccaaacttttgataagcaacaaccatctctccggaaacattcctgtcgaaatatcatccttagatgagcttgagatcttag |
16102701 |
T |
|
| Q |
598 |
accttgcagaaaatgatctaagtggcttcatcacaaaacaacttgcaaatttgcctaaggtatggaacttaaatttgagccataacaaattcacaggaaa |
697 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| |
|
|
| T |
16102702 |
accttgcagaaaatgatctaagtggcttcatcacaaaacaacttgcaaatttgcctaaggtatggaacttaaatttgagccataacaaattgataggaaa |
16102801 |
T |
|
| Q |
698 |
tattcctattgaatttggacaatttaatgtccttgaaatcctagatctcagtggaaattttttgga-tggaacaataccatcaatgcttacacagttgaa |
796 |
Q |
| |
|
||||||| ||||||| ||||||||||| ||||| ||| ||| ||||| |||||||||||||| | ||||||||||||||||||||||||||||||||| |
|
|
| T |
16102802 |
tattcctgttgaattgggacaatttaaaatccttcaaagccttgatctgagtggaaatttttttaaatggaacaataccatcaatgcttacacagttgaa |
16102901 |
T |
|
| Q |
797 |
atacttggaaacattgaatatctcacataataatctttctggttttattccctctagcttcgatcagatgttcagcttaacgtctgttgatatatcatat |
896 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| ||||| || |||||||||||||||||| |
|
|
| T |
16102902 |
atacttggaaacattgaatatctcacataataatctttctggctttattccctctagctttgatcaaatgttaagcttgacatctgttgatatatcatat |
16103001 |
T |
|
| Q |
897 |
aaccaattggagggtccactccccaatattcgagctttcagcaacgctacaattgaagtggtgagaaataataaaggcttgtgtggtaatgtctctggct |
996 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||| ||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
16103002 |
aaccaattggagggtccactccccaacattcgagctttcagaaacgctacaatcgaagtgttgagaaataataaagacttgtgtggtaatgtctctggct |
16103101 |
T |
|
| Q |
997 |
tagagcactgcccaacatcaagcatggaatctcatcatcatcat---acgatgaaagtcttattgatagttttaccctttgtagctgttggaactctagt |
1093 |
Q |
| |
|
|||||| |||||| ||||||||||| |||||||||||||||||| || | ||| |||||||||||||||| ||| || ||||||||||||||||| | |
|
|
| T |
16103102 |
tagagccctgcccgacatcaagcattgaatctcatcatcatcatcatactaacaaaatcttattgatagttttgccccttatagctgttggaactctaat |
16103201 |
T |
|
| Q |
1094 |
tctagccttattttgcttcaaattctcacatcatctcttccaaagatcaaccaccaatgaaaatcaggttggagggaacatcattgtaccacaaaatgta |
1193 |
Q |
| |
|
|| |||||||| ||||||| |||| || |||||||||||| ||||| |||||| ||||| |||| ||||| |||||||||||||||| |||||||| |
|
|
| T |
16103202 |
gttaatattattttgtttcaaatactcatataatctcttccaaacatcaaacaccaacgaaaaccaggctggagagaacatcattgtaccagaaaatgta |
16103301 |
T |
|
| Q |
1194 |
cttacaatatggaactttgatggaaaatttttgtatgagaatattttggaagccacagaagattttgatga |
1264 |
Q |
| |
|
|||||||||||||||||||||||||| || ||| ||| || ||| ||||||||||||||||||||||||| |
|
|
| T |
16103302 |
tttacaatatggaactttgatggaaaaattgtgtttgaaaacattgtggaagccacagaagattttgatga |
16103372 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 574; E-Value: 0
Query Start/End: Original strand, 101 - 1264
Target Start/End: Original strand, 16171886 - 16173040
Alignment:
| Q |
101 |
tgataatgactttatcggtcagctgccgcacaacatttgcattggtgggaatttgaaatacttggctgttatgaataaccacttcacaggctcagttcca |
200 |
Q |
| |
|
|||||||||||| || ||||||||||| || |||||||||||||||||||||||||||| |||| || | | |||||||||||||| ||| |||||| |
|
|
| T |
16171886 |
tgataatgacttcattggtcagctgcctcataacatttgcattggtgggaatttgaaatttttgggtgctctaaataaccacttcaccggccgagttcct |
16171985 |
T |
|
| Q |
201 |
aagagtttgaagaattgctctagcattattaggattagacttgaacaaaaccaacttactggaaatataacagagattatagattttggagtatatccaa |
300 |
Q |
| |
|
||||||||||||||||||||||||||||| || |||||||||| ||||||||||||||||||||||||||| | ||||||| | || ||||||| |
|
|
| T |
16171986 |
aagagtttgaagaattgctctagcattataagacttagacttgaccaaaaccaacttactggaaatataacaca------agattttagtgtttatccaa |
16172079 |
T |
|
| Q |
301 |
atttggtttacatgcaattaagtcaaaacaatttttatggacacctttcatccaattggggaaagttccataatctgacaaccttcaatatttccaataa |
400 |
Q |
| |
|
||||| |||||| | |||||| ||||||||||||| |||||||||||||| ||||||||||||| || || || |||| ||||| |||||| |||| |
|
|
| T |
16172080 |
atttgaattacatagacttaagtgaaaacaatttttacggacacctttcatcgaattggggaaagtgtcaaaacctaacaagcttcataatttcccataa |
16172179 |
T |
|
| Q |
401 |
taatatatcaggccatataccaccagaaataggaggggcacccattttgggttcacttgacttatcttcaaaccatctcacagggaaaattccgaaggag |
500 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||| ||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16172180 |
taatatatcaggtcatataccaccagaaataggaagggcatccaatttgggtatacttgacttatcttcaaaccatctcacagggaaaattccgaaggag |
16172279 |
T |
|
| Q |
501 |
ttaagcaacttatctttgtccaatctcttgataagcaacaaccatctctcaggaaacattcctgtagaaatatcatccttaga---gcttgagaccttag |
597 |
Q |
| |
|
||||||||||| ||||||||||| || ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| |||||||| ||||| |
|
|
| T |
16172280 |
ttaagcaacttgtctttgtccaaacttttgataagcaacaaccatctctccggaaacattcctgtcgaaatatcatccttagatgagcttgagatcttag |
16172379 |
T |
|
| Q |
598 |
accttgcagaaaatgatctaagtggcttcatcacaaaacaacttgcaaatttgcctaaggtatggaacttaaatttgagccataacaaattcacaggaaa |
697 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| |
|
|
| T |
16172380 |
accttgcagaaaatgatctaagtggcttcatcacaaaacaacttgcaaatttgcctaaggtatggaacttaaatttgagccataacaaattgataggaaa |
16172479 |
T |
|
| Q |
698 |
tattcctattgaatttggacaatttaatgtccttgaaatcctagatctcagtggaaattttttggatggaacaataccatcaatgcttacacagttgaaa |
797 |
Q |
| |
|
||||||| ||||||| ||||||||||| ||||| ||| ||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
16172480 |
tattcctgttgaattgggacaatttaaaatccttcaaagccttgatctgagtggaaattttttaaatggaacaataccatcaatgcttacacagttgaaa |
16172579 |
T |
|
| Q |
798 |
tacttggaaacattgaatatctcacataataatctttctggttttattccctctagcttcgatcagatgttcagcttaacgtctgttgatatatcatata |
897 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
16172580 |
tacttggaaacattgaatatctcacataataatctttctggatttattccctctagcttcgatcagatgttcagtttaacgtctgttgatatatcatata |
16172679 |
T |
|
| Q |
898 |
accaattggagggtccactccccaatattcgagctttcagcaacgctacaattgaagtggtgagaaataataaaggcttgtgtggtaatgtctctggctt |
997 |
Q |
| |
|
|||||||||| |||||||||||||| || ||||||||||| | |||||| ||||||||| ||||||||||||| ||||||||||||||| |||||||||| |
|
|
| T |
16172680 |
accaattggaaggtccactccccaacatccgagctttcagtagcgctaccattgaagtgttgagaaataataatggcttgtgtggtaatatctctggctt |
16172779 |
T |
|
| Q |
998 |
agagcactgcccaacatcaagcatggaatctcatcatcatcatacgatgaaagtcttattgatagttttaccctttgtagctgttggaactctagttcta |
1097 |
Q |
| |
|
|||| ||| |||| | || | |||| | | ||| | | | | ||||| |||||||||||||||| ||||| | ||||||||| | ||| |
|
|
| T |
16172780 |
ggagccttgcttaacaccgagaagtaaatcgcctgatcgtaagattaaaaaagtactattgatagttttacctcttgta---ctaggaactctaatgcta |
16172876 |
T |
|
| Q |
1098 |
gccttattttgcttcaaattctcacatcatctcttccaaagatcaaccaccaatgaaaatcaggttggagggaacatcattgtaccacaaaatgtactta |
1197 |
Q |
| |
|
|| | ||| |||||||||| | ||||||||| ||| | |||||||| ||||| ||||| ||||||||||| |||||||| |||||||| ||| |
|
|
| T |
16172877 |
gc---aacttgtttcaaattcttatatcatctctaccatacatcaaccataggagaaaaccaggtaggagggaacattattgtacctcaaaatgttttta |
16172973 |
T |
|
| Q |
1198 |
caatatggaactttgatggaaaatttttgtatgagaatattttggaagccacagaagattttgatga |
1264 |
Q |
| |
|
|||||||||| || ||||||||| | | || ||||| || |||||||||||| ||||||||||||| |
|
|
| T |
16172974 |
caatatggaatttcgatggaaaaatggtctacgagaacatcttggaagccacacaagattttgatga |
16173040 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 177; E-Value: 9e-95
Query Start/End: Original strand, 129 - 994
Target Start/End: Original strand, 17847885 - 17848750
Alignment:
| Q |
129 |
cacaacatttgcattggtgggaatttgaaatacttggctgttatgaataaccacttcacaggctcagttccaaagagtttgaagaattgctctagcatta |
228 |
Q |
| |
|
||||| ||||||| |||||| || ||||||||||| |||||| || ||||||| ||||| || | ||||| | |||||||||||||||||| |||||| |
|
|
| T |
17847885 |
cacaatatttgcactggtggaaacttgaaatacttcgctgttttggataaccatttcactggtcctgttccgatgagtttgaagaattgctcaagcattg |
17847984 |
T |
|
| Q |
229 |
ttaggattagacttgaacaaaaccaacttactggaaatataacagagattatagattttggagtatatccaaatttggtttacatgcaattaagtcaaaa |
328 |
Q |
| |
|
| || ||||| |||||||||||||||||| |||||||||||||||| | ||||| || ||||| ||||||| ||||||||| || |||||||| |
|
|
| T |
17847985 |
taagaattaggcttgaacaaaaccaactttctggaaatataacagatttc------tttggtgtgtatccgaatttggattacatgcatttgagtcaaaa |
17848078 |
T |
|
| Q |
329 |
caatttttatggacacctttcatccaattggggaaagttccataatctgacaaccttcaatatttccaataataatatatcaggccatataccaccagaa |
428 |
Q |
| |
|
||||||||||| || ||||| | || ||||| || | | || |||||| | ||||| | ||||||||||| ||||| ||| ||||||||||||| |
|
|
| T |
17848079 |
taatttttatggccagatttcaccgaactgggggaaatgtcgtagcctgacattcctcaatgtctccaataataacatatctggcggtataccaccagaa |
17848178 |
T |
|
| Q |
429 |
ataggaggggcacccattttgggttcacttgacttatcttcaaaccatctcacagggaaaattccgaaggagttaagcaacttatctt---tgtccaatc |
525 |
Q |
| |
|
|||| | |||| ||||||| | | || |||||||||||||| |||||||||| |||||||| ||||||||| | ||||| ||| |||| || | |
|
|
| T |
17848179 |
ctaggcgaggcaaccattttatatgcgctcgacttatcttcaaattatctcacaggaaaaattccaaaggagttaggtaacttgacttcattgtctaaac |
17848278 |
T |
|
| Q |
526 |
tcttgataagcaacaaccatctctcaggaaacattcctgtagaaatatcatccttagag---cttgagaccttagaccttgcagaaaatgatctaagtgg |
622 |
Q |
| |
|
|||||||| |||||||| ||| ||||||||| |||||||| ||||| |||| || || |||||||||||| | ||||| | |||| |||||||||| |
|
|
| T |
17848279 |
tcttgatacacaacaaccgtctttcaggaaacgttcctgtacaaataacatcactaaagaaacttgagaccttaaatcttgccgtaaattatctaagtgg |
17848378 |
T |
|
| Q |
623 |
cttcatcacaaaacaacttgcaaatttgcctaaggtatggaacttaaatttgagccataacaaattcacaggaaatattcctattgaatttggacaattt |
722 |
Q |
| |
|
||||||||||| | |||| | | |||| |||| ||| |||| | |||||||||||||||||||| | ||||||||||||| |||| ||||| |||||| |
|
|
| T |
17848379 |
cttcatcacaagagaactaggatattttcctagattattgaacatgaatttgagccataacaaatttaaaggaaatattcctgttgagtttggccaattt |
17848478 |
T |
|
| Q |
723 |
aatgtccttgaaatcctagatctcagtggaaattttttggatggaacaataccatcaatgcttacacagttgaaatacttggaaacattgaatatctcac |
822 |
Q |
| |
|
|| |||||| ||| || ||||| ||||| |||||| | | ||||||||||| |||| |||| | || ||| |||||| ||| |||||||||| |||| |
|
|
| T |
17848479 |
aaagtccttcaaagtcttgatcttagtgggaattttctcaacggaacaataccgtcaacgcttgctcaactgatatacttagaatcattgaatatatcac |
17848578 |
T |
|
| Q |
823 |
ataataatctttctggttttattccctctagcttcgatcagatgttcagcttaacgtctgttgatatatcatataaccaattggagggtccactccccaa |
922 |
Q |
| |
|
||||||| |||||||| ||||||||||| | ||| ||||| ||| | || || || ||||| ||||| | ||||||||| |||||||| | || || |
|
|
| T |
17848579 |
ataataacctttctggatttattccctcgaactttgatcatatgctgagtttgttatcggttgacatatcgtttaaccaattagagggtccggttccaaa |
17848678 |
T |
|
| Q |
923 |
tattcgagctttcagcaacgctacaattgaagtggtgagaaataataaaggcttgtgtggtaatgtctctgg |
994 |
Q |
| |
|
|||| |||||||| || || || |||||||| |||||||||||| | | ||||||||||||| ||||| |
|
|
| T |
17848679 |
cattccagctttcaataaagcaaccattgaagttttgagaaataatacaagactgtgtggtaatgtttctgg |
17848750 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 134; E-Value: 4e-69
Query Start/End: Original strand, 585 - 994
Target Start/End: Complemental strand, 15677384 - 15676975
Alignment:
| Q |
585 |
cttgagaccttagaccttgcagaaaatgatctaagtggcttcatcacaaaacaacttgcaaatttgcctaaggtatggaacttaaatttgagccataaca |
684 |
Q |
| |
|
||||| |||||||| ||||||||||| ||||||| || |||||| ||||||||||||| | |||||| | | ||| ||| ||| |||||||||||||| |
|
|
| T |
15677384 |
cttgaaaccttagatgttgcagaaaataatctaagcggtttcatcccaaaacaacttgccattttgcccaggttattcaacctaagtttgagccataaca |
15677285 |
T |
|
| Q |
685 |
aattcacaggaaatattcctattgaatttggacaatttaatgtccttgaaatcctagatctcagtggaaattttttggatggaacaataccatcaatgct |
784 |
Q |
| |
|
|||||| |||||||||||| |||| |||||||||||||| |||||||||| || ||||||||||||||| ||||| | ||| | |||||| ||||||| |
|
|
| T |
15677284 |
aattcattggaaatattccttttgagtttggacaatttaaagtccttgaaagtcttgatctcagtggaaatgttttgaaaggagccataccaccaatgct |
15677185 |
T |
|
| Q |
785 |
tacacagttgaaatacttggaaacattgaatatctcacataataatctttctggttttattccctctagcttcgatcagatgttcagcttaacgtctgtt |
884 |
Q |
| |
|
| | | ||||| ||| |||||||||||||| |||||||| | ||||| ||| | || || ||| ||| ||||||||| | || || | | |||| |
|
|
| T |
15677184 |
tggaaacctgaaacgcttagaaacattgaatatttcacataacattctttttggactgatcccttcttcctttgatcagatgattagtttgtcctttgtt |
15677085 |
T |
|
| Q |
885 |
gatatatcatataaccaattggagggtccactccccaatattcgagctttcagcaacgctacaattgaagtggtgagaaataataaaggcttgtgtggta |
984 |
Q |
| |
|
||||| |||||||||||||||||||||||||| || || || ||||| |||| |||||||||||||||||| |||||||||||| ||||||||| |||| |
|
|
| T |
15677084 |
gatatttcatataaccaattggagggtccacttccaaacatgcgagcattcaataacgctacaattgaagtgttgagaaataatataggcttgtgcggta |
15676985 |
T |
|
| Q |
985 |
atgtctctgg |
994 |
Q |
| |
|
|||| ||||| |
|
|
| T |
15676984 |
atgtttctgg |
15676975 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 601 - 994
Target Start/End: Complemental strand, 15670966 - 15670573
Alignment:
| Q |
601 |
ttgcagaaaatgatctaagtggcttcatcacaaaacaacttgcaaatttgcctaaggtatggaacttaaatttgagccataacaaattcacaggaaatat |
700 |
Q |
| |
|
|||||| |||| |||||||||| |||||| ||||||||||||| | |||||| | | ||| ||| ||| |||||||||||| ||||||| |||||||| |
|
|
| T |
15670966 |
ttgcagcaaataatctaagtggtttcatcccaaaacaacttgccattttgcccaggttattgaatctaagtttgagccataaaaaattcattggaaatat |
15670867 |
T |
|
| Q |
701 |
tcctattgaatttggacaatttaatgtccttgaaatcctagatctcagtggaaattttttggatggaacaataccatcaatgcttacacagttgaaatac |
800 |
Q |
| |
|
|||| ||| |||||||||||||| |||||||||| || ||||||||||||||| ||||| ||||| | |||||| |||||||| | | ||||| | |
|
|
| T |
15670866 |
tcctgatgagtttggacaatttaaagtccttgaaagtcttgatctcagtggaaatgttttgaatggagctataccaccaatgcttggaaacctgaaacgc |
15670767 |
T |
|
| Q |
801 |
ttggaaacattgaatatctcacataataatctttctggttttattccctctagcttcgatcagatgttcagcttaacgtctgttgatatatcatataacc |
900 |
Q |
| |
|
|| |||||||||||||| |||||||| ||||||| ||| || || ||| ||| ||||||||| | || || | | ||||||||| |||||||||| |
|
|
| T |
15670766 |
ttagaaacattgaatatttcacataacaatctttttggacagatcccttcttcctttgatcagatgattagtttgtcctttgttgatatttcatataacc |
15670667 |
T |
|
| Q |
901 |
aattggagggtccactccccaatattcgagctttcagcaacgctacaattgaagtggtgagaaataataaaggcttgtgtggtaatgtctctgg |
994 |
Q |
| |
|
|||||||||||||||| || || || ||||| |||| |||||||||||||||||| |||||||||||| ||||||||| |||||||| ||||| |
|
|
| T |
15670666 |
aattggagggtccacttccaaacatgcgagcattcaataacgctacaattgaagtgttgagaaataatataggcttgtgcggtaatgtttctgg |
15670573 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 115; E-Value: 9e-58
Query Start/End: Original strand, 194 - 997
Target Start/End: Complemental strand, 15665941 - 15665138
Alignment:
| Q |
194 |
agttccaaagagtttgaagaattgctctagcattattaggattagacttgaacaaaaccaacttactggaaatataacagagattatagattttggagta |
293 |
Q |
| |
|
||||||||| ||||||||||||||||||||| ||||||| |||| |||||||| ||||| | |||||| |||||||| ||||| || ||| |
|
|
| T |
15665941 |
agttccaaaaagtttgaagaattgctctagccttattagacttaggcttgaacataaccatatggatggaaacataacagat------gatttgggtgta |
15665848 |
T |
|
| Q |
294 |
tatccaaatttggtttacatgcaattaagtcaaaacaatttttatggacacctttcatccaattggggaaagttccataatctgacaaccttcaatattt |
393 |
Q |
| |
|
|| |||||||||| | |||| ||| | | || ||||||||||| |||||||||||||||||||||||||| ||||| |||| | || || | |
|
|
| T |
15665847 |
tacccaaatttggagttcatgggattggatgacaataatttttatggtcacctttcatccaattggggaaagtttcataacctgaagcaaattaacatct |
15665748 |
T |
|
| Q |
394 |
ccaataataatatatcaggccatataccaccagaaataggaggggcacccattttgggttcacttgacttatcttcaaaccatctcacagggaaaattcc |
493 |
Q |
| |
|
|||| |||||||||||||| ||||||||| ||| || | | || | || |||| |||||||||||||||| ||||||||||| |||||||| |
|
|
| T |
15665747 |
ccaacaataatatatcaggttgtataccacccgaactaagtgaagcggttaacttatattcaattgacttatcttcaaatcatctcacaggaaaaattcc |
15665648 |
T |
|
| Q |
494 |
gaaggagttaagcaacttatct---ttgtccaatctcttgataagcaacaaccatctctcaggaaacattcctgtagaaatatcatcctta---gagctt |
587 |
Q |
| |
|
|||||||| |||| || || ||| | ||||| |||||||||||||||| || || || ||||| | ||||| |||| ||| || ||| |
|
|
| T |
15665647 |
aaaggagttgggcaatttgactaagttgggtagactctttttaagcaacaaccatctttctggcaatgttcctacacaaatagcatcattaaaagaactt |
15665548 |
T |
|
| Q |
588 |
gagaccttagaccttgcagaaaatgatctaagtggcttcatcacaaaacaacttgcaaatttgcctaaggtatggaacttaaatttgagccataacaaat |
687 |
Q |
| |
|
|| | |||||| ||||||||||| |||||| ||||||||||| |||| |||||| | |||||||| | ||| || |||||||| | || ||||||| |
|
|
| T |
15665547 |
gaaatcttagatgttgcagaaaataatctaaatggcttcatcagaaaagaacttgtcattttgcctaggatattcgacataaatttgtgtcaaaacaaat |
15665448 |
T |
|
| Q |
688 |
tcacaggaaatattcctattgaatttggacaatttaatgtccttgaaatcctagatctcagtggaaattttttggatggaacaataccatcaatgcttac |
787 |
Q |
| |
|
| | |||||||||||||| |||||||||| ||||||| | |||| ||| || ||||||||||||||||||||||||||||| |||||| ||| | || |
|
|
| T |
15665447 |
ttagaggaaatattcctaatgaatttggaaaatttaaagcccttcaaagtcttgatctcagtggaaattttttggatggaaccataccaccaacgtttgt |
15665348 |
T |
|
| Q |
788 |
acagttgaaatacttggaaacattgaatatctcacataataatctttctggttttattccctctagcttcgatcagatgttcagcttaacgtctgttgat |
887 |
Q |
| |
|
| || ||| | ||| |||||| ||||||| |||||||| ||||||||||| ||| || ||| ||| ||||||||| | || || | ||||||| |
|
|
| T |
15665347 |
aaagctgatactcttagaaacactgaatatttcacataacaatctttctggcaatatcccttcttcctttgatcagatgattagtttgtcaaatgttgat |
15665248 |
T |
|
| Q |
888 |
atatcatataaccaattggagggtccactccccaatattcgagctttcagcaacgctacaattgaagtggtgagaaataataaaggcttgtgtggtaatg |
987 |
Q |
| |
|
||||||||||||||||| ||||||||||| || || || ||||| |||| ||||||| |||||||| |||||||||||| ||||||||| ||||||| |
|
|
| T |
15665247 |
atatcatataaccaattcgagggtccacttccaaacatgcgagcattcaatgacgctaccattgaagttttgagaaataatacaggcttgtgcggtaatg |
15665148 |
T |
|
| Q |
988 |
tctctggctt |
997 |
Q |
| |
|
| |||||||| |
|
|
| T |
15665147 |
tatctggctt |
15665138 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 117 - 1019
Target Start/End: Complemental strand, 17826851 - 17825963
Alignment:
| Q |
117 |
ggtcagctgccgcacaacatttgcattggtgggaatttgaaatacttggctgttatgaataaccacttcacaggctcagttccaaagagtttgaagaatt |
216 |
Q |
| |
|
|||||||| || ||||| |||||||||||||| || |||||| ||| |||||| || | |||||||||| || | ||||| | |||||||||||||| |
|
|
| T |
17826851 |
ggtcagctcccacacaatatttgcattggtggaaacctgaaattctttgctgttttggagaaccacttcattggtcctgttcccatgagtttgaagaatt |
17826752 |
T |
|
| Q |
217 |
gctctagcattattaggattagacttgaacaaaaccaacttactggaaatataacagagattatagattttggagtatatccaaatttggtttacatgca |
316 |
Q |
| |
|
||||||||||||| || ||||| |||||| ||||| | || ||||||||||| | || | ||||| || ||||||||||| |||||||| |
|
|
| T |
17826751 |
gctctagcattataagaattaggcttgaaaaaaacaacctatctggaaatatatc------taattactttggtgtgcatccaaatttgtactacatgca |
17826658 |
T |
|
| Q |
317 |
attaagtcaaaacaatttttatggacacctttcatccaattggggaaagttccataatctgacaaccttcaatatttccaataataatatatcaggccat |
416 |
Q |
| |
|
|| ||| |||| |||||||||| ||||||||| ||| |||||||| | || || ||| || | |||| | ||||||||||| |||||||| | |
|
|
| T |
17826657 |
gttgagtgaaaatcatttttatggccacctttcactcaactggggaaaatgccgtagcctggcattcctcaacgtctccaataataacatatcaggtggt |
17826558 |
T |
|
| Q |
417 |
ataccaccagaaataggaggggcacccattttgggttcacttgacttatcttcaaaccatctcacagggaaaattccgaaggagttaagcaacttatctt |
516 |
Q |
| |
|
|||||||||||| |||| | | || ||| ||| |||||| |||||||||||||| | |||||||| |||||||| ||||||||| | ||||| ||| |
|
|
| T |
17826557 |
ataccaccagaactaggcgagacaaccaatttatattcactcgacttatcttcaaattacctcacaggaaaaattccaaaggagttaggaaacttgactt |
17826458 |
T |
|
| Q |
517 |
---tgtccaatctcttgataagcaacaaccatctctcaggaaacattcctgtagaaatatcatcctta---gagcttgagaccttagaccttgcagaaaa |
610 |
Q |
| |
|
|||| || ||||||||||||||||||||||| ||||||||||||| ||| ||||| |||| || || |||||||||||| | ||||||| ||| |
|
|
| T |
17826457 |
cattgtctaaactcttgataagcaacaaccatctaacaggaaacattccggtacaaataacatcgctaaaggaacttgagaccttaaatcttgcagcaaa |
17826358 |
T |
|
| Q |
611 |
tgatctaagtggcttcatcacaaaacaacttgcaaatttgcctaaggtatggaacttaaatttgagccataacaaattcacaggaaatattcctattgaa |
710 |
Q |
| |
|
|||||| || |||||| ||||||||||||||| | |||| |||| || | || | ||||||||||| || |||||| |||||||| |
|
|
| T |
17826357 |
tgatcttagcggcttcgtcacaaaacaacttggatattttcctagattacgtgacatgaatttgagccacaatgaattcaaaggaaata----------- |
17826269 |
T |
|
| Q |
711 |
tttggacaatttaatgtccttgaaatcctagatctcagtggaaattttttggatggaacaataccatcaatgcttacacagttgaaatacttggaaacat |
810 |
Q |
| |
|
|||| |||||||| |||||| ||| || ||||| ||||| |||||| | | ||| |||||| | || |||| | || ||| ||||||| | ||| |
|
|
| T |
17826268 |
-ttggccaatttaaagtccttcaaagtcttgatcttagtgggaattttctcaacggagtaataccgttaacgcttgctcaactgatatacttgaagtcat |
17826170 |
T |
|
| Q |
811 |
tgaatatctcacataataatctttctggttttattccctctagcttcgatcagatgttcagcttaacgtctgttgatatatcatataaccaattggaggg |
910 |
Q |
| |
|
||||||| ||||||||||| |||||||| |||||||| || | ||| ||||||||| ||||||| ||||||| ||||||| |||||| || ||||| |
|
|
| T |
17826169 |
tgaatatatcacataataacctttctggatttattccgtcaaactttgatcagatgctcagcttgttaactgttgacatatcatttaaccagtttgaggg |
17826070 |
T |
|
| Q |
911 |
tccactccccaatattcgagctttcagcaacgctacaattgaagtggtgagaaataataaaggcttgtgtggtaatgtctctggcttagagcactgccca |
1010 |
Q |
| |
|
| || | || || |||| ||||||| || ||||| ||||||| |||||||||||||| | ||||| |||||||||||||| |||| |||||| |
|
|
| T |
17826069 |
ttcagttccaaacattccagctttccataaagctacttttgaagttttgagaaataataaaag--actgtggcaatgtctctggcttggagccttgccca |
17825972 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1185 - 1265
Target Start/End: Original strand, 17848932 - 17849012
Alignment:
| Q |
1185 |
caaaatgtacttacaatatggaactttgatggaaaatttttgtatgagaatattttggaagccacagaagattttgatgat |
1265 |
Q |
| |
|
|||||| || |||| ||||||| |||||||||||| | ||||||||| |||| | |||||||||||||||||||||||| |
|
|
| T |
17848932 |
caaaatctatttaccatatggagttttgatggaaaaatggtgtatgagagtattattgaagccacagaagattttgatgat |
17849012 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 452 - 511
Target Start/End: Complemental strand, 15677523 - 15677464
Alignment:
| Q |
452 |
ttcacttgacttatcttcaaaccatctcacagggaaaattccgaaggagttaagcaactt |
511 |
Q |
| |
|
|||| |||||||||||||||||||||| | || |||||||| ||||||||| ||||||| |
|
|
| T |
15677523 |
ttcaattgacttatcttcaaaccatcttattggtaaaattccaaaggagttaggcaactt |
15677464 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1158 - 1264
Target Start/End: Complemental strand, 15664977 - 15664871
Alignment:
| Q |
1158 |
caggttggagggaacatcattgtaccacaaaatgtacttacaatatggaactttgatggaaaatttttgtatgagaatattttggaagccacagaagatt |
1257 |
Q |
| |
|
||||||||||| |||| ||||| || |||||||| |||||||||||| |||||||| ||| | |||||||||| ||| | ||||| || ||||| | |
|
|
| T |
15664977 |
caggttggaggaaacaacattgctcctaaaaatgtatttacaatatggagttttgatgggaaaatggtgtatgagaacattattgaagcaacggaagagt |
15664878 |
T |
|
| Q |
1258 |
ttgatga |
1264 |
Q |
| |
|
||||||| |
|
|
| T |
15664877 |
ttgatga |
15664871 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0289 (Bit Score: 112; Significance: 5e-56; HSPs: 6)
Name: scaffold0289
Description:
Target: scaffold0289; HSP #1
Raw Score: 112; E-Value: 5e-56
Query Start/End: Original strand, 452 - 997
Target Start/End: Complemental strand, 18557 - 18006
Alignment:
| Q |
452 |
ttcacttgacttatcttcaaaccatctcacagggaaaattccgaaggagttaagcaacttatct---ttgtccaatctcttgataagcaacaaccatctc |
548 |
Q |
| |
|
|||| |||||||||||||||| ||||||||||| |||||||| |||||||| |||| || || ||| | ||||| |||||||||||||||| |
|
|
| T |
18557 |
ttcaattgacttatcttcaaatcatctcacaggaaaaattccaaaggagttgggcaatttgactaagttgggtagactctttttaagcaacaaccatctt |
18458 |
T |
|
| Q |
549 |
tcaggaaacattcctgtagaaatatcatcctta---gagcttgagaccttagaccttgcagaaaatgatctaagtggcttcatcacaaaacaacttgcaa |
645 |
Q |
| |
|
|| || || ||||| | ||||| |||| ||| || ||||| | |||||| ||||||||||| |||||| ||||||||||| |||| |||||| | |
|
|
| T |
18457 |
tctggcaatgttcctacacaaatagcatcattaaaagaacttgaaatcttagatgttgcagaaaataatctaaatggcttcatcagaaaagaacttgtca |
18358 |
T |
|
| Q |
646 |
atttgcctaaggtatggaacttaaatttgagccataacaaattcacaggaaatattcctattgaatttggacaatttaatgtccttgaaatcctagatct |
745 |
Q |
| |
|
|||||||| | ||| || |||||||| | || |||||||| | |||||||||||||| |||||||||| ||||||| | |||| ||| || ||||| |
|
|
| T |
18357 |
ttttgcctaggatattcgacataaatttgtgtcaaaacaaatttagaggaaatattcctaatgaatttggaaaatttaaagcccttcaaagtcttgatct |
18258 |
T |
|
| Q |
746 |
cagtggaaattttttggatggaacaataccatcaatgcttacacagttgaaatacttggaaacattgaatatctcacataataatctttctggttttatt |
845 |
Q |
| |
|
|||||||||||||||||||||||| |||||| ||| | || | || ||| | ||| |||||| ||||||| |||||||| ||||||||||| ||| |
|
|
| T |
18257 |
cagtggaaattttttggatggaaccataccaccaacgtttgtaaagctgatactcttagaaacactgaatatttcacataacaatctttctggcaatatc |
18158 |
T |
|
| Q |
846 |
ccctctagcttcgatcagatgttcagcttaacgtctgttgatatatcatataaccaattggagggtccactccccaatattcgagctttcagcaacgcta |
945 |
Q |
| |
|
|| ||| ||| ||||||||| | || || | |||||||||||||||||||||||| ||||||||||| || || || ||||| |||| |||||| |
|
|
| T |
18157 |
ccttcttcctttgatcagatgattagtttgtcaaatgttgatatatcatataaccaattcgagggtccacttccaaacatgcgagcattcaatgacgcta |
18058 |
T |
|
| Q |
946 |
caattgaagtggtgagaaataataaaggcttgtgtggtaatgtctctggctt |
997 |
Q |
| |
|
| |||||||| |||||||||||| ||||||||| |||||||| |||||||| |
|
|
| T |
18057 |
ccattgaagttttgagaaataatacaggcttgtgcggtaatgtatctggctt |
18006 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0289; HSP #2
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 940 - 997
Target Start/End: Complemental strand, 5521 - 5464
Alignment:
| Q |
940 |
acgctacaattgaagtggtgagaaataataaaggcttgtgtggtaatgtctctggctt |
997 |
Q |
| |
|
||||||| ||||||||| |||||||||||| |||||||||||||||||| |||||||| |
|
|
| T |
5521 |
acgctaccattgaagtgttgagaaataatacaggcttgtgtggtaatgtttctggctt |
5464 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0289; HSP #3
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 940 - 997
Target Start/End: Complemental strand, 14354 - 14297
Alignment:
| Q |
940 |
acgctacaattgaagtggtgagaaataataaaggcttgtgtggtaatgtctctggctt |
997 |
Q |
| |
|
||||||| ||||||||| |||||||||||| |||||||||||||||||| |||||||| |
|
|
| T |
14354 |
acgctaccattgaagtgttgagaaataatacaggcttgtgtggtaatgtttctggctt |
14297 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0289; HSP #4
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1158 - 1264
Target Start/End: Complemental strand, 5303 - 5197
Alignment:
| Q |
1158 |
caggttggagggaacatcattgtaccacaaaatgtacttacaatatggaactttgatggaaaatttttgtatgagaatattttggaagccacagaagatt |
1257 |
Q |
| |
|
||||||||||| |||||||||| || |||||||| |||| ||||||| |||||||| ||| | |||||||||| ||| | |||||||||||||| | |
|
|
| T |
5303 |
caggttggaggaaacatcattgctcctaaaaatgtatttactatatggagttttgatgggaaaatggtgtatgagaacattattgaagccacagaagagt |
5204 |
T |
|
| Q |
1258 |
ttgatga |
1264 |
Q |
| |
|
||||||| |
|
|
| T |
5203 |
ttgatga |
5197 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0289; HSP #5
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1158 - 1264
Target Start/End: Complemental strand, 14136 - 14030
Alignment:
| Q |
1158 |
caggttggagggaacatcattgtaccacaaaatgtacttacaatatggaactttgatggaaaatttttgtatgagaatattttggaagccacagaagatt |
1257 |
Q |
| |
|
||||||||||| |||||||||| || |||||||| |||| ||||||| |||||||| ||| | |||||||||| ||| | |||||||||||||| | |
|
|
| T |
14136 |
caggttggaggaaacatcattgctcctaaaaatgtatttactatatggagttttgatgggaaaatggtgtatgagaacattattgaagccacagaagagt |
14037 |
T |
|
| Q |
1258 |
ttgatga |
1264 |
Q |
| |
|
||||||| |
|
|
| T |
14036 |
ttgatga |
14030 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0289; HSP #6
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 194 - 378
Target Start/End: Complemental strand, 18809 - 18631
Alignment:
| Q |
194 |
agttccaaagagtttgaagaattgctctagcattattaggattagacttgaacaaaaccaacttactggaaatataacagagattatagattttggagta |
293 |
Q |
| |
|
||||||||| ||||||||||||||||||||| ||||||| |||| |||||||| ||||| | |||||| |||||||| ||||| || ||| |
|
|
| T |
18809 |
agttccaaaaagtttgaagaattgctctagccttattagacttaggcttgaacataaccatatggatggaaacataacagat------gatttgggtgta |
18716 |
T |
|
| Q |
294 |
tatccaaatttggtttacatgcaattaagtcaaaacaatttttatggacacctttcatccaattggggaaagttccataatctga |
378 |
Q |
| |
|
|| |||||||||| | |||| ||| | | || ||||||||||| ||||||||||| |||||||||||||| ||||| |||| |
|
|
| T |
18715 |
tacccaaatttggagttcatgggattggatgacaataatttttatggtcacctttcatctaattggggaaagtttcataacctga |
18631 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 71; Significance: 2e-31; HSPs: 19)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 71; E-Value: 2e-31
Query Start/End: Original strand, 741 - 1015
Target Start/End: Original strand, 15032424 - 15032698
Alignment:
| Q |
741 |
gatctcagtggaaattttttggatggaacaataccatcaatgcttacacagttgaaatacttggaaacattgaatatctcacataataatctttctggtt |
840 |
Q |
| |
|
||||| ||||| |||||| || ||||||| ||||||||||||||| ||||| || ||| |||||||||||| |||||||||| ||||| |||||| |
|
|
| T |
15032424 |
gatcttagtgggaattttatgaatggaaccataccatcaatgcttgggcagttaaatcgcttagaaacattgaatctctcacataacaatctctctggta |
15032523 |
T |
|
| Q |
841 |
ttattccctctagcttcgatcagatgttcagcttaacgtctgttgatatatcatataaccaattggagggtccactccccaatattcgagctttcagcaa |
940 |
Q |
| |
|
|||||||| ||||| | | | ||||| ||||| || ||||||||||||| || ||||| |||||||||||| | || || ||| |||||||| || |
|
|
| T |
15032524 |
ccattccctcaagctttgttgatatgttaagcttgacaactgttgatatatcttacaaccagttggagggtccaattccaaacattacagctttcaaaaa |
15032623 |
T |
|
| Q |
941 |
cgctacaattgaagtggtgagaaataataaaggcttgtgtggtaatgtctctggcttagagcactgcccaacatc |
1015 |
Q |
| |
|
||| ||||||||| ||| |||||| |||||||| |||||||||||||||||| |||||| ||| ||||||| |
|
|
| T |
15032624 |
agctccaattgaagcattgacaaataacaaaggcttatgtggtaatgtctctggcctagagccttgctcaacatc |
15032698 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 699 - 1015
Target Start/End: Original strand, 15010924 - 15011240
Alignment:
| Q |
699 |
attcctattgaatttggacaatttaatgtccttgaaatcctagatctcagtggaaattttttggatggaacaataccatcaatgcttacacagttgaaat |
798 |
Q |
| |
|
|||||| |||| ||||| ||||| ||||| |||||| || ||||| ||||| |||| | || ||||||| |||||| |||||||| ||||| || |
|
|
| T |
15010924 |
attcctgttgagtttggccaattgaatgttattgaaaatcttgatcttagtgggaattctatgaatggaaccataccagcaatgcttggccagttaaatc |
15011023 |
T |
|
| Q |
799 |
acttggaaacattgaatatctcacataataatctttctggttttattccctctagcttcgatcagatgttcagcttaacgtctgttgatatatcatataa |
898 |
Q |
| |
|
|||| |||||||||||| |||||||||| ||||| |||||| |||||||| ||||| | | | ||||| ||||| || ||||||||||||| || || |
|
|
| T |
15011024 |
acttagaaacattgaatctctcacataacaatctctctggtaccattccctcaagctttgttgatatgttaagcttgacaactgttgatatatcttacaa |
15011123 |
T |
|
| Q |
899 |
ccaattggagggtccactccccaatattcgagctttcagcaacgctacaattgaagtggtgagaaataataaaggcttgtgtggtaatgtctctggctta |
998 |
Q |
| |
|
||||||||||||||| | || ||| || |||||||| | ||| ||||||||| ||| |||||| |||||||| |||||||||||||||||| || |
|
|
| T |
15011124 |
ccaattggagggtccgattccaaatgttacagctttcaaaagagctccaattgaagcattgacaaataacaaaggcttatgtggtaatgtctctggccta |
15011223 |
T |
|
| Q |
999 |
gagcactgcccaacatc |
1015 |
Q |
| |
|
|||| ||| ||||||| |
|
|
| T |
15011224 |
gagccttgctcaacatc |
15011240 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 65; E-Value: 6e-28
Query Start/End: Original strand, 699 - 1015
Target Start/End: Original strand, 15036944 - 15037260
Alignment:
| Q |
699 |
attcctattgaatttggacaatttaatgtccttgaaatcctagatctcagtggaaattttttggatggaacaataccatcaatgcttacacagttgaaat |
798 |
Q |
| |
|
|||||| |||| ||||| ||||| ||||| |||||| ||| ||||| ||||| |||| | || ||||||| |||||| |||||||| ||||| || |
|
|
| T |
15036944 |
attcctgttgagtttggccaattgaatgttattgaaaaccttgatcttagtgggaattctatgaatggaaccataccagcaatgcttggccagttaaatc |
15037043 |
T |
|
| Q |
799 |
acttggaaacattgaatatctcacataataatctttctggttttattccctctagcttcgatcagatgttcagcttaacgtctgttgatatatcatataa |
898 |
Q |
| |
|
|||| |||||||||||| |||||||||| ||||| |||||| ||||||| ||||| | | | ||||| ||||| || ||||||||||||| || || |
|
|
| T |
15037044 |
acttagaaacattgaatctctcacataacaatctctctggtaccattcccttaagctttgttgatatgttaagcttgacaactgttgatatatcttacaa |
15037143 |
T |
|
| Q |
899 |
ccaattggagggtccactccccaatattcgagctttcagcaacgctacaattgaagtggtgagaaataataaaggcttgtgtggtaatgtctctggctta |
998 |
Q |
| |
|
||| ||||||||||| | || || ||| |||||||| | ||| ||||||||| ||| |||||| |||||||| |||||||||||||||||| || |
|
|
| T |
15037144 |
ccagttggagggtccgattccaaacattacagctttcaaaagagctccaattgaagcattgacaaataacaaaggcttatgtggtaatgtctctggccta |
15037243 |
T |
|
| Q |
999 |
gagcactgcccaacatc |
1015 |
Q |
| |
|
|||| ||| ||||||| |
|
|
| T |
15037244 |
gagccttgctcaacatc |
15037260 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 62; E-Value: 4e-26
Query Start/End: Original strand, 699 - 1015
Target Start/End: Original strand, 15002031 - 15002347
Alignment:
| Q |
699 |
attcctattgaatttggacaatttaatgtccttgaaatcctagatctcagtggaaattttttggatggaacaataccatcaatgcttacacagttgaaat |
798 |
Q |
| |
|
|||||| |||| ||||| ||||| ||||| |||||| ||| ||||| ||||| |||| | || ||||||| |||||| |||||||| ||||| || |
|
|
| T |
15002031 |
attcctgttgagtttggccaattgaatgttattgaaaaccttgatcttagtgggaattctatgaatggaaccataccagcaatgcttggccagttaaatc |
15002130 |
T |
|
| Q |
799 |
acttggaaacattgaatatctcacataataatctttctggttttattccctctagcttcgatcagatgttcagcttaacgtctgttgatatatcatataa |
898 |
Q |
| |
|
|||| |||||||||||| |||||||||| ||||| |||||| ||||||| ||||| | | | ||||| ||||| || ||||||||||||| || || |
|
|
| T |
15002131 |
acttagaaacattgaatctctcacataacaatctctctggtaccattccctaaagctttgttgatatgttaagcttgacaactgttgatatatcttacaa |
15002230 |
T |
|
| Q |
899 |
ccaattggagggtcc-actccccaatattcgagctttcagcaacgctacaattgaagtggtgagaaataataaaggcttgtgtggtaatgtctctggctt |
997 |
Q |
| |
|
||| ||||||||||| ||| || || ||| ||||||| | ||| ||||||||| |||||||||| |||||||||||||||||||| |||||| | |
|
|
| T |
15002231 |
ccagttggagggtccgact-ccaaacattacagctttcgaaagagctccaattgaagcactgagaaataacaaaggcttgtgtggtaatgtttctggcct |
15002329 |
T |
|
| Q |
998 |
agagcactgcccaacatc |
1015 |
Q |
| |
|
||||| ||| ||||||| |
|
|
| T |
15002330 |
agagccttgctcaacatc |
15002347 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 764 - 995
Target Start/End: Complemental strand, 14532868 - 14532637
Alignment:
| Q |
764 |
tggaacaataccatcaatgcttacacagttgaaatacttggaaacattgaatatctcacataataatctttctggttttattccctctagcttcgatcag |
863 |
Q |
| |
|
|||||| ||||||||||||||| |||||| || |||| ||||||||||| | |||||||||||||||||||| ||||| | |||| || | || |
|
|
| T |
14532868 |
tggaaccataccatcaatgcttggacagttaaatcacttacaaacattgaatctttcacataataatctttctggaaccattcctttgagctacggtaag |
14532769 |
T |
|
| Q |
864 |
atgttcagcttaacgtctgttgatatatcatataaccaattggagggtccactccccaatattcgagctttcagcaacgctacaattgaagtggtgagaa |
963 |
Q |
| |
|
||||| ||||| || ||||||||||||||| |||||||||||||||||| | || | ||| ||| ||| || ||| ||||||||| | |||| |
|
|
| T |
14532768 |
atgttaagcttgacaattgttgatatatcatacaaccaattggagggtccaattccaagcattacagccttccaaaaagctccaattgaagcacttagaa |
14532669 |
T |
|
| Q |
964 |
ataataaaggcttgtgtggtaatgtctctggc |
995 |
Q |
| |
|
|||| ||||||||||||||||||||||||||| |
|
|
| T |
14532668 |
ataacaaaggcttgtgtggtaatgtctctggc |
14532637 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 53; E-Value: 9e-21
Query Start/End: Original strand, 699 - 1002
Target Start/End: Original strand, 15017039 - 15017342
Alignment:
| Q |
699 |
attcctattgaatttggacaatttaatgtccttgaaatcctagatctcagtggaaattttttggatggaacaataccatcaatgcttacacagttgaaat |
798 |
Q |
| |
|
|||||| |||| ||||| ||||| ||||| |||||| || ||||| ||||| |||| | || ||||||| |||||| |||||||| ||||| || |
|
|
| T |
15017039 |
attcctgttgagtttggccaattgaatgttattgaaaatcttgatcttagtgggaattctatgaatggaaccataccagcaatgcttggccagttaaatc |
15017138 |
T |
|
| Q |
799 |
acttggaaacattgaatatctcacataataatctttctggttttattccctctagcttcgatcagatgttcagcttaacgtctgttgatatatcatataa |
898 |
Q |
| |
|
|||| |||||||||||| |||||||||| ||||| |||||| |||||||| ||||| | | | ||||| ||||| || |||||||| |||| || || |
|
|
| T |
15017139 |
acttagaaacattgaatctctcacataacaatctctctggtaccattccctcaagctttgttgatatgttaagcttgacaactgttgatgtatcttacaa |
15017238 |
T |
|
| Q |
899 |
ccaattggagggtcc-actccccaatattcgagctttcagcaacgctacaattgaagtggtgagaaataataaaggcttgtgtggtaatgtctctggctt |
997 |
Q |
| |
|
||| ||||||||||| ||| || || ||| ||||||| | | ||| ||||||||| ||| |||||| || ||||||||||||||| |||||||| | |
|
|
| T |
15017239 |
ccagttggagggtccgact-ccaaacattacagctttcggaagagctccaattgaagcattgacaaataacaagggcttgtgtggtaatatctctggcct |
15017337 |
T |
|
| Q |
998 |
agagc |
1002 |
Q |
| |
|
||||| |
|
|
| T |
15017338 |
agagc |
15017342 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 176 - 366
Target Start/End: Original strand, 15010401 - 15010585
Alignment:
| Q |
176 |
taaccacttcacaggctcagttccaaagagtttgaagaattgctctagcattattaggattagacttgaacaaaaccaacttactggaaatataacagag |
275 |
Q |
| |
|
|||||| ||||||||| ||||||| ||||||||||||||||||| ||| ||| || | || ||||| |||||||||||||||||||||||||||||| |
|
|
| T |
15010401 |
taaccagttcacaggcctagttccagagagtttgaagaattgctcaagccttacgagactgaggcttgatcaaaaccaacttactggaaatataacagag |
15010500 |
T |
|
| Q |
276 |
attatagattttggagtatatccaaatttggtttacatgcaattaagtcaaaacaatttttatggacacctttcatccaattggggaaagt |
366 |
Q |
| |
|
| |||||| || |||||||| |||| |||||| |||| ||| | || ||||||||||| || ||||| | ||||||||||||| |
|
|
| T |
15010501 |
a------gttttggtgtgtatccaaacttggactacatggaattgagtgataataatttttatggtcatctttctccaaattggggaaagt |
15010585 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 176 - 274
Target Start/End: Original strand, 15001508 - 15001606
Alignment:
| Q |
176 |
taaccacttcacaggctcagttccaaagagtttgaagaattgctctagcattattaggattagacttgaacaaaaccaacttactggaaatataacaga |
274 |
Q |
| |
|
|||||| ||||||||| ||||||| ||||||||||||||||||| ||| ||| || | |||||| ||||||||||||| ||||||||||||||||| |
|
|
| T |
15001508 |
taaccagttcacaggcctagttccagagagtttgaagaattgctcaagccttacgagagtgagacttcaacaaaaccaactgactggaaatataacaga |
15001606 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 692 - 1016
Target Start/End: Complemental strand, 14522819 - 14522495
Alignment:
| Q |
692 |
aggaaatattcctattgaatttggacaatttaatgtccttgaaatcctagatctcagtggaaattttttggatggaacaataccatcaatgcttacacag |
791 |
Q |
| |
|
|||||| |||||| ||||| |||| ||||| ||||| ||||| || ||||| || || ||||||||| ||||||| |||||| |||||||| |||| |
|
|
| T |
14522819 |
aggaaacattcctgttgaacttggtcaattgaatgttattgaagatcttgatcttagcgggaattttttgaatggaaccataccaacaatgcttggacag |
14522720 |
T |
|
| Q |
792 |
ttgaaatacttggaaacattgaatatctcacataataatctttctggttttattccctctagcttcgatcagatgttcagcttaacgtctgttgatatat |
891 |
Q |
| |
|
|| || ||| |||||||||||| |||||||||||||||| | |||| ||||||| ||||| | | ||||| || || || |||||||||||| |
|
|
| T |
14522719 |
ttaaatcgcttagaaacattgaatctctcacataataatctctatggtaacattcccttaagcttttttgatatgttaagtttgacaactgttgatatat |
14522620 |
T |
|
| Q |
892 |
catataaccaattggagggtccactccccaatattcgagctttcagcaacgctacaattgaagtggtgagaaataataaaggcttgtgtggtaatgtctc |
991 |
Q |
| |
|
| || |||| |||||||||||| | || || ||| ||| ||| | ||| || |||||| | |||||||| ||||||||||| ||||||||||| |
|
|
| T |
14522619 |
cttacaaccggttggagggtccaattccaaacattacagcattccaaagagctccagttgaagcatttagaaataacaaaggcttgtgcggtaatgtctc |
14522520 |
T |
|
| Q |
992 |
tggcttagagcactgcccaacatca |
1016 |
Q |
| |
|
|||| |||||| ||| |||||||| |
|
|
| T |
14522519 |
tggcctagagccttgctcaacatca |
14522495 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 176 - 272
Target Start/End: Original strand, 15016516 - 15016612
Alignment:
| Q |
176 |
taaccacttcacaggctcagttccaaagagtttgaagaattgctctagcattattaggattagacttgaacaaaaccaacttactggaaatataaca |
272 |
Q |
| |
|
|||||| ||||||||| ||||||| ||||||||||||||||||| ||| ||| || | || ||||||||||||||||| ||||||||||||||| |
|
|
| T |
15016516 |
taaccagttcacaggcctagttccagagagtttgaagaattgctcaagccttaagagactgaggcttgaacaaaaccaactgactggaaatataaca |
15016612 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 174 - 366
Target Start/End: Original strand, 14503381 - 14503567
Alignment:
| Q |
174 |
aataaccacttcacaggctcagttccaaagagtttgaagaattgctctagcattattaggattagacttgaacaaaaccaacttactggaaatataacag |
273 |
Q |
| |
|
|||||||| |||||||| || ||||||||||||| ||||||||||| ||| ||||||| |||| ||| || |||| ||| | |||||||||||||||| |
|
|
| T |
14503381 |
aataaccaattcacagggccaattccaaagagtttaaagaattgctccagccttattagagttaggcttcaaaaaaatcaattaactggaaatataacag |
14503480 |
T |
|
| Q |
274 |
agattatagattttggagtatatccaaatttggtttacatgcaattaagtcaaaacaatttttatggacacctttcatccaattggggaaagt |
366 |
Q |
| |
|
| | |||||| || |||||| |||||| |||||| |||| ||| |||| ||||| ||||| || || ||| | ||||||||||||| |
|
|
| T |
14503481 |
a------tggttttggtgtttatccacatttggactacatggaattgagtgaaaataatttgtatggccatctatcaccaaattggggaaagt |
14503567 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 692 - 839
Target Start/End: Original strand, 14467720 - 14467867
Alignment:
| Q |
692 |
aggaaatattcctattgaatttggacaatttaatgtccttgaaatcctagatctcagtggaaattttttggatggaacaataccatcaatgcttacacag |
791 |
Q |
| |
|
|||||| |||||| | || ||||| ||||| ||||| |||||| || ||||| |||| ||||||||| | ||||| || ||| ||||| || |||| |
|
|
| T |
14467720 |
aggaaacattcctgtcgagtttggccaattaaatgttcttgaagatcttgatcttagtgagaattttttgaacggaaccattccagcaatgtttggacag |
14467819 |
T |
|
| Q |
792 |
ttgaaatacttggaaacattgaatatctcacataataatctttctggt |
839 |
Q |
| |
|
|| || |||| |||||||||||| ||||||||||||||||||||||| |
|
|
| T |
14467820 |
ttaaatcacttagaaacattgaatctctcacataataatctttctggt |
14467867 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 692 - 839
Target Start/End: Original strand, 14481902 - 14482049
Alignment:
| Q |
692 |
aggaaatattcctattgaatttggacaatttaatgtccttgaaatcctagatctcagtggaaattttttggatggaacaataccatcaatgcttacacag |
791 |
Q |
| |
|
|||||| |||||| | || ||||| ||||| ||||| |||||| || ||||| |||| ||||||||| | ||||| || ||| ||||| || |||| |
|
|
| T |
14481902 |
aggaaacattcctgtcgagtttggccaattaaatgttcttgaagatcttgatcttagtgagaattttttgaacggaaccattccagcaatgtttggacag |
14482001 |
T |
|
| Q |
792 |
ttgaaatacttggaaacattgaatatctcacataataatctttctggt |
839 |
Q |
| |
|
|| || |||| |||||||||||| ||||||||||||||||||||||| |
|
|
| T |
14482002 |
ttaaatcacttagaaacattgaatctctcacataataatctttctggt |
14482049 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1186 - 1261
Target Start/End: Complemental strand, 14522331 - 14522256
Alignment:
| Q |
1186 |
aaaatgtacttacaatatggaactttgatggaaaatttttgtatgagaatattttggaagccacagaagattttga |
1261 |
Q |
| |
|
||||| || |||||||||||| ||||||||||||| | ||||||||||||| | |||||||||||||||||||| |
|
|
| T |
14522331 |
aaaatctatttacaatatggagctttgatggaaaaatggtgtatgagaatatcatcgaagccacagaagattttga |
14522256 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 741 - 892
Target Start/End: Original strand, 15025083 - 15025234
Alignment:
| Q |
741 |
gatctcagtggaaattttttggatggaacaataccatcaatgcttacacagttgaaatacttggaaacattgaatatctcacataataatctttctggtt |
840 |
Q |
| |
|
||||| ||||| |||||| || ||||||| ||||||||||||||| ||||| || ||| |||||||||||| |||||||||| ||||| |||||| |
|
|
| T |
15025083 |
gatcttagtgggaattttatgaatggaaccataccatcaatgcttgggcagttaaatcgcttagaaacattgaatctctcacataacaatctctctggta |
15025182 |
T |
|
| Q |
841 |
ttattccctctagcttcgatcagatgttcagcttaacgtctgttgatatatc |
892 |
Q |
| |
|
|||||||| ||||| | | | ||||| ||||| || ||||||||||||| |
|
|
| T |
15025183 |
ccattccctcaagctttgttgatatgttaagcttgacaactgttgatatatc |
15025234 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 960 - 1015
Target Start/End: Original strand, 15040929 - 15040984
Alignment:
| Q |
960 |
agaaataataaaggcttgtgtggtaatgtctctggcttagagcactgcccaacatc |
1015 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||| ||||||| ||| ||||||| |
|
|
| T |
15040929 |
agaaataacaaaggcttgtgtggtaatgtctctggcctagagcattgctcaacatc |
15040984 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 274
Target Start/End: Original strand, 15040164 - 15040255
Alignment:
| Q |
183 |
ttcacaggctcagttccaaagagtttgaagaattgctctagcattattaggattagacttgaacaaaaccaacttactggaaatataacaga |
274 |
Q |
| |
|
|||||||| || |||||||||||||||||||||| || || | | || | ||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
15040164 |
ttcacaggtccaattccaaagagtttgaagaattgttcaagtctaaagagagtgagacttgaacaaaaccaacttgctggaaatataacaga |
15040255 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 14467202 - 14467252
Alignment:
| Q |
174 |
aataaccacttcacaggctcagttccaaagagtttgaagaattgctctagc |
224 |
Q |
| |
|
|||||||| ||||||||| || ||||||||||||||||||| ||||||||| |
|
|
| T |
14467202 |
aataaccaattcacaggcccaattccaaagagtttgaagaactgctctagc |
14467252 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 220
Target Start/End: Complemental strand, 14533458 - 14533412
Alignment:
| Q |
174 |
aataaccacttcacaggctcagttccaaagagtttgaagaattgctc |
220 |
Q |
| |
|
|||||||| ||||||||| || ||||||||||||||||||| ||||| |
|
|
| T |
14533458 |
aataaccaattcacaggcccaattccaaagagtttgaagaagtgctc |
14533412 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0400 (Bit Score: 70; Significance: 6e-31; HSPs: 4)
Name: scaffold0400
Description:
Target: scaffold0400; HSP #1
Raw Score: 70; E-Value: 6e-31
Query Start/End: Original strand, 747 - 1016
Target Start/End: Original strand, 12751 - 13020
Alignment:
| Q |
747 |
agtggaaattttttggatggaacaataccatcaatgcttacacagttgaaatacttggaaacattgaatatctcacataataatctttctggttttattc |
846 |
Q |
| |
|
||||||||||||||| | ||||| ||||||||||||||| |||||| || || | ||||||||||| | |||||||||||||||||||| |||| |
|
|
| T |
12751 |
agtggaaattttttgaacggaaccataccatcaatgcttggacagttaaatcacatacaaacattgaatctttcacataataatctttctggaaccattc |
12850 |
T |
|
| Q |
847 |
cctctagcttcgatcagatgttcagcttaacgtctgttgatatatcatataaccaattggagggtccactccccaatattcgagctttcagcaacgctac |
946 |
Q |
| |
|
| | |||| || | ||||||| ||||| || ||||||||||||||| ||||||||||||||||| | || || |||| ||| ||| || ||| | |
|
|
| T |
12851 |
ctttgagctacggtaagatgttaagcttgacaattgttgatatatcatacaaccaattggagggtccgattcctaacattccagccttcctaaaagctcc |
12950 |
T |
|
| Q |
947 |
aattgaagtggtgagaaataataaaggcttgtgtggtaatgtctctggcttagagcactgcccaacatca |
1016 |
Q |
| |
|
|||||||| |||||||||| |||||||||||||||||||||||||| |||||| ||| |||||||| |
|
|
| T |
12951 |
aattgaagcactgagaaataacaaaggcttgtgtggtaatgtctctggtctagagccttgctcaacatca |
13020 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0400; HSP #2
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 757 - 1002
Target Start/End: Original strand, 6473 - 6715
Alignment:
| Q |
757 |
ttttggatggaacaataccatcaatgcttacacagttgaaatacttggaaacattgaatatctcacataataatctttctggttttattccctctagctt |
856 |
Q |
| |
|
||||| ||||||| |||||| |||||||| | |||| || ||| |||||||||||| |||||||||||||| |||||||| ||||||| | || |
|
|
| T |
6473 |
ttttgaatggaaccataccaacaatgcttggagagttaaatcgcttagaaacattgaatctctcacataataatttttctggtaccattcccttgaccta |
6572 |
T |
|
| Q |
857 |
cgatcagatgttcagcttaacgtctgttgatatatcatataaccaattggagggtccactccccaatattcgagctttcagcaacgctacaattgaagtg |
956 |
Q |
| |
|
| | |||||| |||||||| || ||||||||||||| |||||||| || |||||| | || || |||| ||| |||| || ||| ||||||||| |
|
|
| T |
6573 |
tggtgagatgtcaagcttaacaactattgatatatcatacaaccaatttgaaggtccaattccaaacattccagccttcaaaaatgctccaattgaagca |
6672 |
T |
|
| Q |
957 |
gtgagaaataataaaggcttgtgtggtaatgtctctggcttagagc |
1002 |
Q |
| |
|
| |||||||| ||||||||||||||||| |||||||||||||| |
|
|
| T |
6673 |
ttaagaaataacaaaggcttgtgtggtaa---ctctggcttagagc |
6715 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0400; HSP #3
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 340
Target Start/End: Original strand, 12178 - 12338
Alignment:
| Q |
174 |
aataaccacttcacaggctcagttccaaagagtttgaagaattgctctagcattattaggattagacttgaacaaaaccaacttactggaaatataacag |
273 |
Q |
| |
|
||||| || |||||||| | |||||||| |||||||||||||||||| ||| ||||||| |||| ||| || |||| ||| | |||||||||||||||| |
|
|
| T |
12178 |
aataatcatttcacaggattagttccaatgagtttgaagaattgctccagccttattagagttaggcttcaaaaaaatcaattaactggaaatataacag |
12277 |
T |
|
| Q |
274 |
agattatagattttggagtatatccaaatttggtttacatgcaattaagtcaaaacaatttttatgg |
340 |
Q |
| |
|
| | |||||| || |||||| ||||||| |||||| |||||||| | || ||||||||||| |
|
|
| T |
12278 |
a------tggttttggtgtttatccacatttggtctacatggaattaagtgataataatttttatgg |
12338 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0400; HSP #4
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 274
Target Start/End: Original strand, 5910 - 5990
Alignment:
| Q |
194 |
agttccaaagagtttgaagaattgctctagcattattaggattagacttgaacaaaaccaacttactggaaatataacaga |
274 |
Q |
| |
|
||||||||||||||| || |||||||| ||| ||| || | |||||| ||||||||||||| |||| |||||||||||| |
|
|
| T |
5910 |
agttccaaagagtttaaaaaattgctcaagccttaagagagtgagacttcaacaaaaccaactgactgcaaatataacaga |
5990 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0365 (Bit Score: 70; Significance: 6e-31; HSPs: 4)
Name: scaffold0365
Description:
Target: scaffold0365; HSP #1
Raw Score: 70; E-Value: 6e-31
Query Start/End: Original strand, 747 - 1016
Target Start/End: Original strand, 13394 - 13663
Alignment:
| Q |
747 |
agtggaaattttttggatggaacaataccatcaatgcttacacagttgaaatacttggaaacattgaatatctcacataataatctttctggttttattc |
846 |
Q |
| |
|
||||||||||||||| | ||||| ||||||||||||||| |||||| || || | ||||||||||| | |||||||||||||||||||| |||| |
|
|
| T |
13394 |
agtggaaattttttgaacggaaccataccatcaatgcttggacagttaaatcacatacaaacattgaatctttcacataataatctttctggaaccattc |
13493 |
T |
|
| Q |
847 |
cctctagcttcgatcagatgttcagcttaacgtctgttgatatatcatataaccaattggagggtccactccccaatattcgagctttcagcaacgctac |
946 |
Q |
| |
|
| | |||| || | ||||||| ||||| || ||||||||||||||| ||||||||||||||||| | || || |||| ||| ||| || ||| | |
|
|
| T |
13494 |
ctttgagctacggtaagatgttaagcttgacaattgttgatatatcatacaaccaattggagggtccgattcctaacattccagccttcctaaaagctcc |
13593 |
T |
|
| Q |
947 |
aattgaagtggtgagaaataataaaggcttgtgtggtaatgtctctggcttagagcactgcccaacatca |
1016 |
Q |
| |
|
|||||||| |||||||||| |||||||||||||||||||||||||| |||||| ||| |||||||| |
|
|
| T |
13594 |
aattgaagcactgagaaataacaaaggcttgtgtggtaatgtctctggtctagagccttgctcaacatca |
13663 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0365; HSP #2
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 757 - 1002
Target Start/End: Original strand, 7117 - 7359
Alignment:
| Q |
757 |
ttttggatggaacaataccatcaatgcttacacagttgaaatacttggaaacattgaatatctcacataataatctttctggttttattccctctagctt |
856 |
Q |
| |
|
||||| ||||||| |||||| |||||||| | |||| || ||| |||||||||||| |||||||||||||| |||||||| ||||||| | || |
|
|
| T |
7117 |
ttttgaatggaaccataccaacaatgcttggagagttaaatcgcttagaaacattgaatctctcacataataatttttctggtaccattcccttgaccta |
7216 |
T |
|
| Q |
857 |
cgatcagatgttcagcttaacgtctgttgatatatcatataaccaattggagggtccactccccaatattcgagctttcagcaacgctacaattgaagtg |
956 |
Q |
| |
|
| | |||||| |||||||| || ||||||||||||| |||||||| || |||||| | || || |||| ||| |||| || ||| ||||||||| |
|
|
| T |
7217 |
tggtgagatgtcaagcttaacaactattgatatatcatacaaccaatttgaaggtccaattccaaacattccagccttcaaaaatgctccaattgaagca |
7316 |
T |
|
| Q |
957 |
gtgagaaataataaaggcttgtgtggtaatgtctctggcttagagc |
1002 |
Q |
| |
|
| |||||||| ||||||||||||||||| |||||||||||||| |
|
|
| T |
7317 |
ttaagaaataacaaaggcttgtgtggtaa---ctctggcttagagc |
7359 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0365; HSP #3
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 340
Target Start/End: Original strand, 12821 - 12981
Alignment:
| Q |
174 |
aataaccacttcacaggctcagttccaaagagtttgaagaattgctctagcattattaggattagacttgaacaaaaccaacttactggaaatataacag |
273 |
Q |
| |
|
||||| || |||||||| | |||||||| |||||||||||||||||| ||| ||||||| |||| ||| || |||| ||| | |||||||||||||||| |
|
|
| T |
12821 |
aataatcatttcacaggattagttccaatgagtttgaagaattgctccagccttattagagttaggcttcaaaaaaatcaattaactggaaatataacag |
12920 |
T |
|
| Q |
274 |
agattatagattttggagtatatccaaatttggtttacatgcaattaagtcaaaacaatttttatgg |
340 |
Q |
| |
|
| | |||||| || |||||| ||||||| |||||| |||||||| | || ||||||||||| |
|
|
| T |
12921 |
a------tggttttggtgtttatccacatttggtctacatggaattaagtgataataatttttatgg |
12981 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0365; HSP #4
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 274
Target Start/End: Original strand, 6554 - 6634
Alignment:
| Q |
194 |
agttccaaagagtttgaagaattgctctagcattattaggattagacttgaacaaaaccaacttactggaaatataacaga |
274 |
Q |
| |
|
||||||||||||||| || |||||||| ||| ||| || | |||||| ||||||||||||| |||| |||||||||||| |
|
|
| T |
6554 |
agttccaaagagtttaaaaaattgctcaagccttaagagagtgagacttcaacaaaaccaactgactgcaaatataacaga |
6634 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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