View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14419_low_2 (Length: 621)

Name: NF14419_low_2
Description: NF14419
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14419_low_2
NF14419_low_2
[»] chr4 (1 HSPs)
chr4 (1-597)||(18925736-18926332)
[»] chr7 (19 HSPs)
chr7 (223-597)||(4666662-4667039)
chr7 (264-591)||(4712075-4712402)
chr7 (257-577)||(4697204-4697524)
chr7 (229-577)||(4653259-4653601)
chr7 (200-597)||(4630634-4631028)
chr7 (344-597)||(4846009-4846262)
chr7 (264-595)||(4783831-4784162)
chr7 (255-597)||(4672435-4672777)
chr7 (264-595)||(4816260-4816591)
chr7 (411-595)||(4636772-4636956)
chr7 (264-597)||(4863690-4864023)
chr7 (346-597)||(4643521-4643772)
chr7 (458-597)||(4647488-4647625)
chr7 (397-597)||(4662892-4663092)
chr7 (212-311)||(4661529-4661628)
chr7 (255-305)||(4643445-4643495)
chr7 (205-256)||(4632713-4632764)
chr7 (1-39)||(4661327-4661365)
chr7 (207-256)||(4670170-4670219)


Alignment Details
Target: chr4 (Bit Score: 552; Significance: 0; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 552; E-Value: 0
Query Start/End: Original strand, 1 - 597
Target Start/End: Complemental strand, 18926332 - 18925736
Alignment:
Q  1 caattgtaaagtagcggcacaaatggggcggtaaagatggcaacccttcactctttgtttctgacgagttatcttccatagaatcctcatcacgatatcg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18926332 caattgtaaagtagcggcacaaatggggcggtaaagatggcaacccttcactctttgtttctgacgagttatcttccatagaatcctcatcacgatatcg 18926233  T
Q  101 ccattgccaataaatggtgaaacccaccataagtacactaacagaagctaaggtgatctctaaggaaactaagacaatcttatgnnnnnnngacgttttg 200  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||    
T  18926232 ccattgccaataaatggtgaaacccaccataagcacactaacagaagctaaggtgatctctaaggaaactaagacaatcttatatttttttgacgttttg 18926133  T
Q  201 gttgacaatacttgatgcgggtgagatagatcattggattttgatattgatcctgcgagattgttatttttgtcacttattttcaaaatctcgatcccat 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18926132 gttgacaatacttgatgcgggtgagatagatcattggattttgatattgatcctgcgagattgttatttttgtcacttattttcaaaatctcgatcccat 18926033  T
Q  301 tcaatgtgacattacgttattttgagtagatattttctggtgctcgttgtagctttattgaaagattaactcttttaattttagagcttccttctcgaga 400  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  18926032 tcaatgtgacattacggtattttgagtagatattttctggtgctcgttgtagctttattgaaagattaactcttttaatttgcgagcttccttctcgaga 18925933  T
Q  401 gtacatagtcacaacataatccttatgaacaggaatcatacgagcaccactccaatgaatcacatcagcatttcgttcagccaaattatcatctataaaa 500  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18925932 gtacatagtcacaacataatccttatgaacaggaaccatacgagcaccactccaatgaatcacatcagcatttcgttcagccaaattatcatctataaaa 18925833  T
Q  501 atctgaaaaactctatcaccttgattctttatatgccaatcaaactcgcaaaaatgcaatcttaccaaataagtaaaggcagaatcaacttcaaaat 597  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18925832 atctgaaaaactctatcaccttgattctttatatgccaatcaaactcgcaaaaatgcaatcttaccaaataagtaaaggcagaatcaacttcaaaat 18925736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 156; Significance: 1e-82; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 223 - 597
Target Start/End: Original strand, 4666662 - 4667039
Alignment:
Q  223 gagatagatcattggattttgatattgatcctgcgagattgttatttttgtcacttattttcaaaatctcgatcccattcaatgtgacattacgttattt 322  Q
    |||||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||| |    ||||| ||  |||||    
T  4666662 gagatagaacaatggattttgatattggtcctgcgagattgttatttttgtcacttatttttaaaatctcgattccattaagaaggacatcactgtattt 4666761  T
Q  323 tgagtagatattttctggtgctcgttgtagctttattgaaagattaactcttttaattttagagcttccttctcgagagtacatagtcacaacataatcc 422  Q
    ||   ||| | |||||||| ||||||| ||||| ||||||||||||||||||| ||||| |  ||| ||| || |||| | ||||||||   ||||||||    
T  4666762 tgtaaagacagtttctggtactcgttgaagcttaattgaaagattaactctttcaatttgacggctccctccttgagaatccatagtcaaggcataatcc 4666861  T
Q  423 ttatgaacaggaatcatacgagcaccact---ccaatgaatcacatcagcatttcgttcagccaaattatcatctataaaaatctgaaaaactctatcac 519  Q
    ||||||||||||| ||||||| |||||||   ||||| || ||| |||||  || ||||||||| | |||||||||||||||||||||||||||||||||    
T  4666862 ttatgaacaggaaccatacgaacaccactactccaataaagcacgtcagcccttggttcagccataatatcatctataaaaatctgaaaaactctatcac 4666961  T
Q  520 cttgattctttatatgccaatcaaactcgcaaaaatgcaatcttaccaaataagtaaaggcagaatcaacttcaaaat 597  Q
    || ||||||| ||||||||||||||||| ||||||||||| ||||||| |||||||||   ||||||||||| |||||    
T  4666962 ctggattcttgatatgccaatcaaactcacaaaaatgcaaccttaccatataagtaaaaatagaatcaactttaaaat 4667039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 264 - 591
Target Start/End: Complemental strand, 4712402 - 4712075
Alignment:
Q  264 ttatttttgtcacttattttcaaaatctcgatcccattcaatgtgacattacgttattttgagtagatattttctggtgctcgttgtagctttattgaaa 363  Q
    |||||||| ||||||||||| |||||||| || ||||||| | |||||| ||| || |||| ||||||| |||||||| ||||||| ||||| |||||||    
T  4712402 ttatttttatcacttattttgaaaatctcaattccattcattatgacatcacggtaatttgtgtagatactttctggttctcgttgaagcttaattgaaa 4712303  T
Q  364 gattaactcttttaattttagagcttccttctcgagagtacatagtcacaacataatccttatgaacaggaatcatacgagcaccactccaatgaatcac 463  Q
    | |||||||||| ||||| ||||||||| | | ||||||||||  ||||| |||||||||||||||||||||||||   | |||||||||| | ||||||    
T  4712302 ggttaactctttcaatttcagagcttccattttgagagtacattttcacagcataatccttatgaacaggaatcatgttaccaccactccagtaaatcac 4712203  T
Q  464 atcagcatttcgttcagccaaattatcatctataaaaatctgaaaaactctatcaccttgattctttatatgccaatcaaactcgcaaaaatgcaatctt 563  Q
    |||||| | | ||||||||||| ||||||  ||||| |||||||||||||||||||||| |||||| ||| ||  ||||||||| |||||||| || |||    
T  4712202 atcagcgtattgttcagccaaaatatcattgataaatatctgaaaaactctatcacctttattcttgataagcagatcaaactcacaaaaatgtaacctt 4712103  T
Q  564 accaaataagtaaaggcagaatcaactt 591  Q
    |||| |||||||||   |||||||||||    
T  4712102 accatataagtaaaactagaatcaactt 4712075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 257 - 577
Target Start/End: Complemental strand, 4697524 - 4697204
Alignment:
Q  257 gagattgttatttttgtcacttattttcaaaatctcgatcccattcaatgtgacattacgttattttgagtagatattttctggtgctcgttgtagcttt 356  Q
    |||||| | |||||| ||| ||||||||||||||||||| |||||||||||||||| ||  ||| ||| | |||||  | |||||||||||||||||||     
T  4697524 gagattatcatttttatcatttattttcaaaatctcgatgccattcaatgtgacatcaccgtatcttgtgaagatacgtcctggtgctcgttgtagcttg 4697425  T
Q  357 attgaaagattaactcttttaattttagagcttccttctcgagagtacatagtcacaacataatccttatgaacaggaatcatacgagcaccactccaat 456  Q
    ||||||||||||| ||||| ||||| ||||||||||||| |||||| ||||| |||| ||||||| ||||||||||||| |||| ||| |  |||||||     
T  4697424 attgaaagattaagtctttcaatttgagagcttccttcttgagagtgcatagacacagcataatctttatgaacaggaaccataggagtagtactccaag 4697325  T
Q  457 gaatcacatcagcatttcgttcagccaaattatcatctataaaaatctgaaaaactctatcaccttgattctttatatgccaatcaaactcgcaaaaatg 556  Q
     |||||||||||| |||   || |||||| ||| | |||| || || ||||| ||||||||||||  ||| || ||||||  ||||||||| ||||||||    
T  4697324 aaatcacatcagcgtttatctccgccaaagtattagctatgaatatttgaaagactctatcacctatatttttgatatgctgatcaaactcacaaaaatg 4697225  T
Q  557 caatcttaccaaataagtaaa 577  Q
    ||| ||||||| |||||||||    
T  4697224 caaccttaccatataagtaaa 4697204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 229 - 577
Target Start/End: Original strand, 4653259 - 4653601
Alignment:
Q  229 gatcattggattttgatattgatcctgcgagattgttatttttgtcacttattttcaaaatctcgatcccattcaatgtgacattacgttattttgagta 328  Q
    ||||| ||||||||| ||||||||||||||||||||  || | |||||||  ||| ||||||| ||| ||||||||| ||||||  || ||||||| ||     
T  4653259 gatcaatggattttgttattgatcctgcgagattgtcgttgtagtcactttcttttaaaatctggattccattcaatatgacatcgcggtattttgtgtg 4653358  T
Q  329 gatattttctggtgctcgttgtagctttattgaaagattaactcttttaattttagagcttccttctcgagagtacatagtcacaacataatccttatga 428  Q
    | || ||      ||||  |||||||| |||| |||||||||||||| ||||| || ||||||||||  ||||| |||||||||||||||||||||||||    
T  4653359 gttagtt------gctctctgtagcttgattgtaagattaactctttcaatttgagtgcttccttcttcagagtgcatagtcacaacataatccttatga 4653452  T
Q  429 acaggaatcatacgagcaccactccaatgaatcacatcagcatttcgttcagccaaattatcatctataaaaatctgaaaaactctatcaccttgattct 528  Q
    |||||||||| |||||||   |||||   |||||||||||||||| ||||||||||   ||||| |||||| ||||| |||||||||||||||| || ||    
T  4653453 acaggaatcaaacgagcattgctccatgaaatcacatcagcatttggttcagccaagaaatcatgtataaatatctggaaaactctatcacctttatcct 4653552  T
Q  529 ttatatgccaatcaaactcgcaaaaatgcaatcttaccaaataagtaaa 577  Q
    | ||| |||||||||| || |||||||| || || |||| |||||||||    
T  4653553 tgatacgccaatcaaattcacaaaaatgtaacctgaccatataagtaaa 4653601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 200 - 597
Target Start/End: Original strand, 4630634 - 4631028
Alignment:
Q  200 ggttgacaatacttgatgcgggtgagatagatcattggattttgatattgatcctgcgagattgttatttttgtcacttattttcaaaatctcgatccca 299  Q
    |||||| ||| |||||||| || |||||||| || || ||||||| |||   ||||| |||||   | |||| ||||||||||| |||||||| || |||    
T  4630634 ggttgaaaattcttgatgccggggagatagaccaatgaattttgaaatttgccctgcaagatt---agttttatcacttattttgaaaatctcaattcca 4630730  T
Q  300 ttcaatgtgacattacgttattttgagtagatattttctggtgctcgttgtagctttattgaaagattaactcttttaattttagagcttccttctcgag 399  Q
    ||||    ||||| ||| ||| ||| ||  ||| |||||||||||||| | ||||| ||||||||||||||||||| ||||| ||||||||||||| |||    
T  4630731 ttcagcaggacatcacgatatattgtgtgtatagtttctggtgctcgtcgaagcttgattgaaagattaactctttcaatttgagagcttccttcttgag 4630830  T
Q  400 agtacatagtcacaacataatccttatgaacaggaatcatacgagcaccactccaatgaatcacatcagcatttcgttcagccaaattatcatctataaa 499  Q
    ||||||||  |||||||||||||||||||  ||||| ||||||||||||||||||    ||||||||||| |||   ||||| | | | | | |||| ||    
T  4630831 agtacataagcacaacataatccttatgagtaggaaccatacgagcaccactccaccttatcacatcagctttttcctcagctagaatgttagctatgaa 4630930  T
Q  500 aatctgaaaaactctatcaccttgattctttatatgccaatcaaactcgcaaaaatgcaatcttaccaaataagtaaaggcagaatcaacttcaaaat 597  Q
    ||||||||| ||||||||||||||||   ||||   |   |||||||| |||||||| |||||||||| ||||||||| | |||||||||||||||||    
T  4630931 aatctgaaagactctatcaccttgatctcttatcgtcatttcaaactcacaaaaatgtaatcttaccatataagtaaaagaagaatcaacttcaaaat 4631028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 344 - 597
Target Start/End: Complemental strand, 4846262 - 4846009
Alignment:
Q  344 tcgttgtagctttattgaaagattaactcttttaattttagagcttccttctcgagagtacatagtcacaacataatccttatgaacaggaatcatacga 443  Q
    |||||| ||||| ||||||||||||||||||| ||||| ||||||||| | | ||||||| ||  ||||| |||||||||||||||||||||||||   |    
T  4846262 tcgttgaagcttgattgaaagattaactctttcaatttcagagcttccattttgagagtagattttcacagcataatccttatgaacaggaatcatgtta 4846163  T
Q  444 gcaccactccaatgaatcacatcagcatttcgttcagccaaattatcatctataaaaatctgaaaaactctatcaccttgattctttatatgccaatcaa 543  Q
     |||||||||||  |||||||||||||| | ||||||||||| ||||||  ||||| |||||||||||||||||||||| ||||||  || ||  |||||    
T  4846162 ccaccactccaaaaaatcacatcagcatatagttcagccaaaatatcattgataaatatctgaaaaactctatcacctttattcttggtaagcagatcaa 4846063  T
Q  544 actcgcaaaaatgcaatcttaccaaataagtaaaggcagaatcaacttcaaaat 597  Q
    |||| |||||||| || ||||||| |||||||||   |||||||||||| ||||    
T  4846062 actcacaaaaatgtaaccttaccatataagtaaaactagaatcaacttcgaaat 4846009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 264 - 595
Target Start/End: Complemental strand, 4784162 - 4783831
Alignment:
Q  264 ttatttttgtcacttattttcaaaatctcgatcccattcaatgtgacattacgttattttgagtagatattttctggtgctcgttgtagctttattgaaa 363  Q
    |||||||| |||||||||||||||||||| || |||||||| ||||||| ||| |||   |     |||  || ||||  |||||||||||| || ||||    
T  4784162 ttatttttatcacttattttcaaaatctcaattccattcaacgtgacatcacgatataccgtaggcataggttttggtaatcgttgtagcttgatcgaaa 4784063  T
Q  364 gattaactcttttaattttagagcttccttctcgagagtacatagtcacaacataatccttatgaacaggaatcatacgagcaccactccaatgaatcac 463  Q
    |||||||| ||| ||||| |||||||||  || ||||   |||||||||  ||||||||||||||||||||| || | |||||||||||||    |||||    
T  4784062 gattaactttttcaatttgagagcttccgccttgagaacccatagtcacggcataatccttatgaacaggaaccaaaggagcaccactccaccttatcac 4783963  T
Q  464 atcagcatttcgttcagccaaattatcatctataaaaatctgaaaaactctatcaccttgattctttatatgccaatcaaactcgcaaaaatgcaatctt 563  Q
    |||||||    ||||||||||| |||||||||| ||||||||||||| ||||||||| |  |  || ||||||||||||||||| |||||||| || |||    
T  4783962 atcagcagcatgttcagccaaactatcatctatgaaaatctgaaaaattctatcaccatcctgtttgatatgccaatcaaactcacaaaaatgtaacctt 4783863  T
Q  564 accaaataagtaaaggcagaatcaacttcaaa 595  Q
    |||| ||||||||| |||||||||||||||||    
T  4783862 accatataagtaaaagcagaatcaacttcaaa 4783831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 255 - 597
Target Start/End: Original strand, 4672435 - 4672777
Alignment:
Q  255 gcgagattgttatttttgtcacttattttcaaaatctcgatcccattcaatgtgacattacgttattttgagtagatattttctggtgctcgttgtagct 354  Q
    |||||||| |||||||| ||||||| ||| ||||||||||| ||||| |||||||||| ||  | ||||| |||| |  | | || |  | |||| ||||    
T  4672435 gcgagattattatttttatcacttactttgaaaatctcgattccatttaatgtgacatcactgtcttttgtgtagttcatatttgttagtggttgaagct 4672534  T
Q  355 ttattgaaagattaactcttttaattttagagcttccttctcgagagtacatagtcacaacataatccttatgaacaggaatcatacgagcaccactcca 454  Q
    | || |||||||||||||||| ||||| ||||||||||||| ||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||    
T  4672535 taatagaaagattaactctttcaatttgagagcttccttcttgagagtacatagtgacagcataatccttatgaacaggaaccatacgagcaccactcca 4672634  T
Q  455 atgaatcacatcagcatttcgttcagccaaattatcatctataaaaatctgaaaaactctatcaccttgattctttatatgccaatcaaactcgcaaaaa 554  Q
    |   || ||||||||  ||   ||||||| | | | | ||||||||||||||||  |||||||||||  |||  | ||| |||  |||||||| ||||||    
T  4672635 acttataacatcagctctttcctcagccagagtgttagctataaaaatctgaaaggctctatcacctgtattaatgataagcctgtcaaactcacaaaaa 4672734  T
Q  555 tgcaatcttaccaaataagtaaaggcagaatcaacttcaaaat 597  Q
    || || ||||||| |||||| || | ||||||||| |||||||    
T  4672735 tgtaaccttaccatataagtgaaagaagaatcaacctcaaaat 4672777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 264 - 595
Target Start/End: Complemental strand, 4816591 - 4816260
Alignment:
Q  264 ttatttttgtcacttattttcaaaatctcgatcccattcaatgtgacattacgttattttgagtagatattttctggtgctcgttgtagctttattgaaa 363  Q
    |||||||| |||||||||||||||||||| || |||||||| ||||||| ||| |||   ||    |||  || ||||  ||| |||||||| || ||||    
T  4816591 ttatttttatcacttattttcaaaatctcaattccattcaacgtgacatcacgatataccgaaggcataggttttggtaatcgatgtagcttgatcgaaa 4816492  T
Q  364 gattaactcttttaattttagagcttccttctcgagagtacatagtcacaacataatccttatgaacaggaatcatacgagcaccactccaatgaatcac 463  Q
    |||||||| ||| ||||| |||||||||  |  ||||   |||||||||  |||||||||||||||||||||  | | |||||||||||||    |||||    
T  4816491 gattaactttttcaatttgagagcttccgccatgagaacccatagtcacggcataatccttatgaacaggaacaaaaggagcaccactccaccatatcac 4816392  T
Q  464 atcagcatttcgttcagccaaattatcatctataaaaatctgaaaaactctatcaccttgattctttatatgccaatcaaactcgcaaaaatgcaatctt 563  Q
    |||||||    ||||||||||| |||||||||| ||||||||||||| ||||||||| |  |  || ||||||||||||||||| |||||||| || |||    
T  4816391 atcagcaaaaagttcagccaaactatcatctatgaaaatctgaaaaattctatcaccatcctgtttgatatgccaatcaaactcacaaaaatgtaacctt 4816292  T
Q  564 accaaataagtaaaggcagaatcaacttcaaa 595  Q
    |||| ||||||||| |||||||||||||||||    
T  4816291 accatataagtaaaagcagaatcaacttcaaa 4816260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 411 - 595
Target Start/End: Original strand, 4636772 - 4636956
Alignment:
Q  411 acaacataatccttatgaacaggaatcatacgagcaccactccaatgaatcacatcagcatttcgttcagccaaattatcatctataaaaatctgaaaaa 510  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    |||||||| || |||  |||| ||||| | | |||||| || |||||||| |    
T  4636772 acaacataatccttatgaacaggaaccatacgagcaccactccaccctatcacatccgccttttcttcaaccaaagtgttatctatgaatatctgaaaga 4636871  T
Q  511 ctctatcaccttgattctttatatgccaatcaaactcgcaaaaatgcaatcttaccaaataagtaaaggcagaatcaacttcaaa 595  Q
    |||||||||||| ||  || ||||||||||||||||| |||||||| || ||||||| ||||||||| |||||||||||||||||    
T  4636872 ctctatcacctttatagttgatatgccaatcaaactcacaaaaatgtaaccttaccatataagtaaaagcagaatcaacttcaaa 4636956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 264 - 597
Target Start/End: Original strand, 4863690 - 4864023
Alignment:
Q  264 ttatttttgtcacttattttcaaaatctcgatcccattcaatgtgacattacgttattttgagtagatattttctggtgctcgttgtagctttattgaaa 363  Q
    |||||||| || |||||||| ||||||||||| |||||||| || |||| ||| |||||||   | ||  | | ||||  | |||||| ||| |  ||||    
T  4863690 ttatttttatcgcttattttaaaaatctcgattccattcaacgtaacatcacggtattttgtaaacatggtctttggtaattgttgtaacttgagcgaaa 4863789  T
Q  364 gattaactcttttaattttagagcttccttctcgagagtacatagtcacaacataatccttatgaacaggaatcatacgagcaccactccaatgaatcac 463  Q
    | |||||||||| ||||| |||||||||||||  |||||  |||| ||||  |||||||||||||||||||| |||||||| ||| |||||  | |||||    
T  4863790 ggttaactctttcaatttgagagcttccttcttcagagtttatagacacagtataatccttatgaacaggaaccatacgagaaccgctccaccgtatcac 4863889  T
Q  464 atcagcatttcgttcagccaaattatcatctataaaaatctgaaaaactctatcaccttgattctttatatgccaatcaaactcgcaaaaatgcaatctt 563  Q
    |||||| |||   ||||||| | ||| | |||| |||||||||||  |||||||||||| |||  |||||| |  ||||||||| |||||||| || |||    
T  4863890 atcagcgttttcctcagccatactattaactatgaaaatctgaaaggctctatcacctttatttgttatattcggatcaaactcacaaaaatgtaacctt 4863989  T
Q  564 accaaataagtaaaggcagaatcaacttcaaaat 597  Q
    |||| |||||||||   |||||||||||||||||    
T  4863990 accatataagtaaaattagaatcaacttcaaaat 4864023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 346 - 597
Target Start/End: Original strand, 4643521 - 4643772
Alignment:
Q  346 gttgtagctttattgaaagattaactcttttaattttagagcttccttctcgagagtacatagtcacaacataatccttatgaacaggaatcatacgagc 445  Q
    |||| ||||| |||||||||||| |||||| || || ||||||||||||| || ||| ||||| ||   ||||||||||||||||||||| || ||||||    
T  4643521 gttgaagcttgattgaaagattagctctttcaagttgagagcttccttcttgatagtccatagacattgcataatccttatgaacaggaaccaaacgagc 4643620  T
Q  446 accactccaatgaatcacatcagcatttcgttcagccaaattatcatctataaaaatctgaaaaactctatcaccttgattctttatatgccaatcaaac 545  Q
    |||||||||    |||||||| || |||  |||| ||||| | | |||||| || |||||||| ||||||||||||| |||  |||||| |  |||||||    
T  4643621 accactccaccctatcacatccgccttttcttcaaccaaagtgttatctatgaatatctgaaagactctatcacctttatttgttatatccggatcaaac 4643720  T
Q  546 tcgcaaaaatgcaatcttaccaaataagtaaaggcagaatcaacttcaaaat 597  Q
    || |||||||| || ||||||| |||||||||  |||||||||| |||||||    
T  4643721 tcacaaaaatgtaaccttaccatataagtaaaaccagaatcaacctcaaaat 4643772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 458 - 597
Target Start/End: Original strand, 4647488 - 4647625
Alignment:
Q  458 aatcacatcagcatttcgttcagccaaattatcatctataaaaatctgaaaaactctatcaccttgattctttatatgccaatcaaactcgcaaaaatgc 557  Q
    ||||||||||||||   ||||||||||| ||||||||||||| || ||||||||| ||||||||  |||||||||||| ||||||||||| |||||  |     
T  4647488 aatcacatcagcataatgttcagccaaaatatcatctataaacatatgaaaaactgtatcacctgaattctttatatgtcaatcaaactcacaaaa--gt 4647585  T
Q  558 aatcttaccaaataagtaaaggcagaatcaacttcaaaat 597  Q
    || ||||||| |||||||||  ||||||||||||||||||    
T  4647586 aaccttaccatataagtaaaaccagaatcaacttcaaaat 4647625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 397 - 597
Target Start/End: Original strand, 4662892 - 4663092
Alignment:
Q  397 gagagtacatagtcacaacataatccttatgaacaggaatcatacgagcaccactccaatgaatcacatcagc-atttcgttcagccaaattatcatcta 495  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||||| ||  ||||||    |||||||| || | ||| |||| | |||||||||||||    
T  4662892 gagagtacatagtcacaccataatccttatgaacaggaaccatacgaccattactccaccttatcacatcggctaattc-ttcaactaaattatcatcta 4662990  T
Q  496 taaaaatctgaaaaactctatcaccttgattctttatatgccaatcaaactcgcaaaaatgcaatcttaccaaataagtaaaggcagaatcaacttcaaa 595  Q
    ||||||||||||| | ||||||||||| |||  | |||| |  ||||||||| |||||||| || |||||||  || ||||| | ||||||||| |||||    
T  4662991 taaaaatctgaaacattctatcacctttatttatgatattcggatcaaactcacaaaaatgtaaccttaccatgtatgtaaaagaagaatcaacctcaaa 4663090  T
Q  596 at 597  Q
    ||    
T  4663091 at 4663092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 212 - 311
Target Start/End: Original strand, 4661529 - 4661628
Alignment:
Q  212 ttgatgcgggtgagatagatcattggattttgatattgatcctgcgagattgttatttttgtcacttattttcaaaatctcgatcccattcaatgtgaca 311  Q
    |||||||||||||||||||| | |||||||||||| || || || |||||| | ||||| ||||||||| || |||||||| || ||||||||| |||||    
T  4661529 ttgatgcgggtgagatagataaatggattttgataatgctcttgtgagattttgattttcgtcacttatatttaaaatctcaattccattcaatatgaca 4661628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 255 - 305
Target Start/End: Original strand, 4643445 - 4643495
Alignment:
Q  255 gcgagattgttatttttgtcacttattttcaaaatctcgatcccattcaat 305  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  4643445 gcgagattgttatttttgtcacttatttttaaaatctcgattccattcaat 4643495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 205 - 256
Target Start/End: Original strand, 4632713 - 4632764
Alignment:
Q  205 acaatacttgatgcgggtgagatagatcattggattttgatattgatcctgc 256  Q
    |||||||||||| |||||||||||||||| ||| ||||||||||||||||||    
T  4632713 acaatacttgatacgggtgagatagatcaatggtttttgatattgatcctgc 4632764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 4661327 - 4661365
Alignment:
Q  1 caattgtaaagtagcggcacaaatggggcggtaaagatg 39  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  4661327 caattgtaaagtagcggcacaaatggggcggcaaagatg 4661365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 207 - 256
Target Start/End: Original strand, 4670170 - 4670219
Alignment:
Q  207 aatacttgatgcgggtgagatagatcattggattttgatattgatcctgc 256  Q
    |||||||||| |||||||||||||||| || |||||||||||| ||||||    
T  4670170 aatacttgatacgggtgagatagatcaatgaattttgatattggtcctgc 4670219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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