View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1441A-Insertion-11 (Length: 783)
Name: NF1441A-Insertion-11
Description: NF1441A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1441A-Insertion-11 |
 | |
|
| [»] chr4 (19 HSPs) |
| |
|
| [»] chr2 (4 HSPs) |
| |
|
Alignment Details
Target: chr4 (Bit Score: 629; Significance: 0; HSPs: 19)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 629; E-Value: 0
Query Start/End: Original strand, 8 - 783
Target Start/End: Complemental strand, 8041702 - 8040930
Alignment:
| Q |
8 |
atattccctacttaatcttactattgatgcttgtatacaggaagatgaagagctatgtaaactcattaatataaatccgctactctctttgaaaattaaa |
107 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8041702 |
atattccctacttaatcttactattgatgcttggatacaggaagatgaagagctatgtaaactcattaatataaatccgctactctctttgaaaattaat |
8041603 |
T |
|
| Q |
108 |
gagtatggaaattgtccaaaatctgagttactccctttaatctttggctctcactctttgacatttcttgatctttcttattatagtaggtatgacgggt |
207 |
Q |
| |
|
| |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| |||||||||| |||||||||||| |
|
|
| T |
8041602 |
gggtatggaaggtgtccaaaatctgagttacttcctttaatctttggctctcactctttgacatttcttgagctttgttattatagttggtatgacgggt |
8041503 |
T |
|
| Q |
208 |
atgcaaagtgtccaaaatctcttcacttacctgcattaagaaccttgcatcttaattttttcagatttgttgtaactcacaatcattgtgctgacccttt |
307 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
8041502 |
atgcaaagtgtccaaaatctcttcacttacctgcattaagaaccttgcatcttaattttttcagatttgttgcaactcacaatcattgtgctgacccttt |
8041403 |
T |
|
| Q |
308 |
tccaaactgtcacgtgttgaatactttggttctcgatggttgtattttgattgaggatgcacaagtcctctgcatatctaatcagacattatccaatttg |
407 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8041402 |
tccaaactgtcacgtgttgaatattttggttctcgatagctgttctttgattgaggatgcacaagtcctctgcatatctaatcagacattatccaatttg |
8041303 |
T |
|
| Q |
408 |
actatatcctatgtatcagctgaccaatttttgctttctactccaaatcttagttcttttactattgatggtagttcnnnnnnncatcaactcttggcct |
507 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||| |||| | |||||||||||||| |
|
|
| T |
8041302 |
actataacctatgtatcagctgtccaattttcgctttctactccaaatcttagttcttttactatccatggtggttctttttttcgtcaactcttggcct |
8041203 |
T |
|
| Q |
508 |
ccacatgcaatctttcttttcttcaacaagtaaatatgtttggcttttattcctatatcggggaagcttcaatcttcttaagatggctgcaagtgctggc |
607 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||| | |||| ||| || ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8041202 |
ccacatgcaatctttcttttcttcaacaagtaaatatgtatggcat---ttccaataacgtggaagcttcaatcttcttaagatggctgcaagtgctggc |
8041106 |
T |
|
| Q |
608 |
caatgtaaagattttgagatttgactattctgtcattgaaacaatacaaaaggtaggtgactgttgtgtactttgacatctatattttgattacacaaac |
707 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
8041105 |
caatgtaaagattttgagatttgactattctgtcattgaaacaatacaaaaggtaggtgactgttgtgtactttcacatctatattttgattacacaaac |
8041006 |
T |
|
| Q |
708 |
atttgggtccttgaatatgttaatccgtgtaagtagtctttgaatgtattacaaaaacatatccgaatttgtcatt |
783 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8041005 |
atttgggtccttgaatatgttaatccgtgtaagtagtctttgaatgtattacaaaaacatatccgaatttgtcatt |
8040930 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 389; E-Value: 0
Query Start/End: Original strand, 8 - 693
Target Start/End: Original strand, 8410890 - 8411584
Alignment:
| Q |
8 |
atattccctacttaatcttactattgatgcttgtatacaggaagatgaag------agctatgtaaactcattaatataaatccgctactctctttgaaa |
101 |
Q |
| |
|
|||||| || ||||||||||||||| ||||||| |||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||| |
|
|
| T |
8410890 |
atattcactgcttaatcttactattaatgcttggatacaggaagatgaagaagaagagctatgcaaactcattaatataaatccactactctctttgaaa |
8410989 |
T |
|
| Q |
102 |
attaaagagtatggaaattgtccaaaatctgagttactccctttaatctttggctctcactctttgacatttcttgatctttcttattatagtaggtatg |
201 |
Q |
| |
|
||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| |
|
|
| T |
8410990 |
attaatgggtatggaaagtgtccaaaatctgagttactccctttaatctttggctctcactctttgacatttcttgagctttgttattatagtaggtatg |
8411089 |
T |
|
| Q |
202 |
acgggtatgcaaagtgtccaaaatctcttcacttacctgcattaagaaccttgcatcttaattttttcagatttgttgtaactcacaatcattgtgctga |
301 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||| |
|
|
| T |
8411090 |
acgggcatgcaaagtgtccaaaatctcttcacttacctgcattaagaaccttgcatcttaaatttttcaactttgttgcaactcacaatcattgtgctga |
8411189 |
T |
|
| Q |
302 |
cccttttccaaactgtcacgtgttgaatactttggttctcgatggttgtattttgattgaggatgcacaagtcctctgcatatctaatcagacattatcc |
401 |
Q |
| |
|
|||||||||||| ||||| ||| |||| |||||||| ||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8411190 |
cccttttccaaaatgtcatgtgctgaagactttggtgctcaggtattgttctttgattgaagatgcacaagtcctctgcatatctaatcagacattatcc |
8411289 |
T |
|
| Q |
402 |
aatttgactatatcctatgtatcagctgaccaatttttgctttctactccaaatcttagttcttttactattgatggtagttcnnnnnnncatcaactct |
501 |
Q |
| |
|
| |||||||||| |||||| |||||||||||||| ||||||||||||| ||||||||||||||||||| ||| |||||| |||||||||| |
|
|
| T |
8411290 |
agtttgactataagtaatgtattagctgaccaattttcgctttctactccatatcttagttcttttactatcgatagtagttatttttttcatcaactct |
8411389 |
T |
|
| Q |
502 |
tggcctccacatgcaatctttcttttcttcaacaagtaaatatgtttggcttt---tattcctatatcggggaagcttcaatcttcttaagatggctgca |
598 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||||| | | | | || |||||||||||||||| ||||||||||||| |
|
|
| T |
8411390 |
tggcctccacatgcaatctttcttttcttcaacaagtaaatatgtatggcttttcctgtaacgaggacgaggaagcttcaatcttcgtaagatggctgca |
8411489 |
T |
|
| Q |
599 |
agtgctggccaatgtaaagattttgagatttgactattctgtcattgaaacaatacaaaaggtaggtgactgttgtgtactttgacatctatatt |
693 |
Q |
| |
|
|||||| ||||||||||||||||||| ||||| | ||||||| || ||||||||||| ||||| |||||| | ||||||||| ||||||||||| |
|
|
| T |
8411490 |
agtgcttgccaatgtaaagattttgaaatttggcggttctgtccttcaaacaatacaagaggtaagtgactttagtgtactttcacatctatatt |
8411584 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 338; E-Value: 0
Query Start/End: Original strand, 130 - 769
Target Start/End: Original strand, 8416620 - 8417255
Alignment:
| Q |
130 |
ctgagttactccctttaatctttggctctcactctttgacatttcttgatctttcttattatagtaggtatgacgggtatgcaaagtgtccaaaatctct |
229 |
Q |
| |
|
||||| ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||||||||||| |
|
|
| T |
8416620 |
ctgagatactcccgttaatctttggctctcactctttgacatttcttgagctttcttattatagtaggtatgactggtatgcgaagtgtccaaaatctct |
8416719 |
T |
|
| Q |
230 |
tcacttacctgcattaagaaccttgcatcttaattttttcagatttgttgtaactcacaatcattgtgctgacccttttccaaactgtcacgtgttgaat |
329 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||| | ||||||| ||||||| ||||||||||||| || ||| |||||||||| ||| ||||| |
|
|
| T |
8416720 |
tcacttacctgcattaagaaccttgcatcttaaattttttaactttgttgcaactcacgatcattgtgctgagcccttttcaaactgtcatgtgctgaat |
8416819 |
T |
|
| Q |
330 |
actttggttctcgatggttgtattttgattgaggatgcacaagtcctctgcatatctaatcagacattatccaatttgactatatcctatgtatcagctg |
429 |
Q |
| |
|
||||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
8416820 |
actttggttatcagtggttgttctttgattgaggatgcacaagtcctctgcatatctaatcagacattatccaatttgactatatcctacgtatcagctg |
8416919 |
T |
|
| Q |
430 |
accaatttttgctttctactccaaatcttagttcttttactattgatggtagttcnnnnnnncatcaactcttggcctccacatgcaatctttcttttct |
529 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||| | |||||||| ||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
8416920 |
accaattttcgctttctactccaaatcttagttcttttactatcaaaggtagttctctttttcatcaacccttggcctccacatgcaatctttcttttct |
8417019 |
T |
|
| Q |
530 |
tcaacaagtaaatat-----gtttggct-tttattcctatatcggggaagcttcaatcttcttaagatggctgcaagtgctggccaatgtaaagattttg |
623 |
Q |
| |
|
||||||||||| | | || ||| | |||| | |||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| |
|
|
| T |
8417020 |
tcaacaagtaacttttactggtatggatggctatttcactatcggggaagcttcaatcttcttaagatggctgcaagtgtttgccaatgtaaagattttg |
8417119 |
T |
|
| Q |
624 |
agatttgactattctgtcattgaaacaatacaaaaggtaggtgactgttgtgtactttgacatctatattttgattacacaaacatttgggtccttgaat |
723 |
Q |
| |
|
| | ||| || | |||| ||||||| ||||| || ||| ||| | ||| |||| ||||||||| |||||||| ||||| ||||||||||| |
|
|
| T |
8417120 |
aaagttggctctgctgttcttgaaacgatacacaatgtaagtg----------aatttcacatatatattttggttacacaatcatttaggtccttgaat |
8417209 |
T |
|
| Q |
724 |
atgttaatccgtgtaagtagtctttgaatgtattacaaaaacatat |
769 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
8417210 |
atgttaatcggtgtaagtagtctttgaatgtattacaaaaacatat |
8417255 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 305; E-Value: 1e-171
Query Start/End: Original strand, 54 - 663
Target Start/End: Complemental strand, 8036239 - 8035636
Alignment:
| Q |
54 |
gaagagctatgtaaactcattaatataaatccgctactctctttgaaaattaaagagtatggaaattgtccaaaatctgagttactccctttaatctttg |
153 |
Q |
| |
|
|||||||||| ||||||||||||||||||||| |||||||||||||||||||| | |||||| || |||||||||||||||||||||||||||||||||| |
|
|
| T |
8036239 |
gaagagctatataaactcattaatataaatccactactctctttgaaaattaatgggtatgggaagtgtccaaaatctgagttactccctttaatctttg |
8036140 |
T |
|
| Q |
154 |
gctctcactctttgacatttcttgatctttcttattatagtaggtatgacgggtatgcaaagtgtccaaaatctcttcacttacctgcattaagaacctt |
253 |
Q |
| |
|
||||||| |||||||||||||||||||||| |||| |||||| || || | || ||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
8036139 |
gctctcattctttgacatttcttgatctttgttat---agtaggaataacacggatacaaagtgtccaaaatctcttcacttgcctgcattaagaacctt |
8036043 |
T |
|
| Q |
254 |
gcatcttaattttttcagatttgttgtaactcacaatcattgtgctgacccttttccaaactgtcacgtgttgaatactttggttctcgatggttgtatt |
353 |
Q |
| |
|
||||||||| | ||||| ||||||| |||||||||||||||||||||||| |||| ||||||||| |||||||||| ||||||||||||| | ||| | |
|
|
| T |
8036042 |
gcatcttaaatatttcaagtttgttgcaactcacaatcattgtgctgacccctttcaaaactgtcatgtgttgaatattttggttctcgatagctgttct |
8035943 |
T |
|
| Q |
354 |
ttgattgaggatgcacaagtcctctgcatatctaatcagacattatccaatttgactatatcctatgtatcagctgaccaatttttgctttctactccaa |
453 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||| |||||| |||| || |||||||||||||| |
|
|
| T |
8035942 |
ttgattgaggatgcacaagtcctctgcatatctaatcagacactatccaatttgactatatcatctgtactagctgaacaatattcgctttctactccaa |
8035843 |
T |
|
| Q |
454 |
atcttagttcttttactattgatggtagttcnnnnnnncatcaactcttggcctccacatgcaatctttcttttcttcaacaagtaaatatgtttggctt |
553 |
Q |
| |
|
||||||||||||||||| | | || | || ||||||| |||||||||||||||||||||||||||||||||||||||||| || ||| |
|
|
| T |
8035842 |
ggcttagttcttttactatcgggcattgtcctatttttcagaaactcttatcctccacatgcaatctttcttttcttcaacaagtaaatatgtatgactt |
8035743 |
T |
|
| Q |
554 |
ttattcctatatcggggaagcttcaatcttcttaagatggctgcaagtgctggccaatgtaaagattttgagatttgactattctgtcattgaaacaata |
653 |
Q |
| |
|
|||| ||| | |||||||| |||||||||| |||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||| ||||| |
|
|
| T |
8035742 |
---ttccaataatgcggaagctttgatcttcttaaattggctgcaagtgcttgccaatgtaaagattttgaaatttggctattctgtcattgatacaatc |
8035646 |
T |
|
| Q |
654 |
caaaaggtag |
663 |
Q |
| |
|
|||||||||| |
|
|
| T |
8035645 |
caaaaggtag |
8035636 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 280; E-Value: 1e-156
Query Start/End: Original strand, 54 - 783
Target Start/End: Complemental strand, 9138840 - 9138133
Alignment:
| Q |
54 |
gaagagctatgtaaactcattaatataaatccgctactctctttgaaaattaaagagtatggaaattgtccaaaatctgagtta---ctccctttaatct |
150 |
Q |
| |
|
||||| |||| |||||||||||| |||||||| || ||||||||||||||| | ||||| ||| |||||||||||||||||| ||||||||| ||| |
|
|
| T |
9138840 |
gaagacctatataaactcattaaaataaatccacttctctctttgaaaatttttgggtatgcaaagtgtccaaaatctgagttattactccctttactct |
9138741 |
T |
|
| Q |
151 |
ttggctctcactctttgacatttcttgatctttcttattatagtaggtatgacgggtatgcaaagtgtccaaaatctcttcacttacctgcattaagaac |
250 |
Q |
| |
|
||||||||| |||||||||||||||||| |||||||||| ||| | | |||||||||||||||||||||||||||||||| |||| ||||||||||| |
|
|
| T |
9138740 |
ttggctctcgctctttgacatttcttgacctttcttatt---gtatgaaaaacgggtatgcaaagtgtccaaaatctcttcacataccagcattaagaac |
9138644 |
T |
|
| Q |
251 |
cttgcatcttaattttttcagatttgttgtaactcacaatcattgtgctgacccttttccaaactgtcacgtgttgaatactttggttctcgatggttgt |
350 |
Q |
| |
|
|||||||||| | | ||| ||||||| ||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||| || |||| |
|
|
| T |
9138643 |
cttgcatcttcaatggttccactttgttgcaactcacgatcactgtgctgacccctttccaaactgtcacgtgttgaatactttggttctcattgcttgt |
9138544 |
T |
|
| Q |
351 |
attttgattgaggatgcacaagtcctctgcatatctaatcagacattatccaatttgactatatcctatgtatcagctgaccaatttttgctttctactc |
450 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||||||||||| || |||||| ||| |
|
|
| T |
9138543 |
tctttgattgaggatgcacaagtcctctgcatatctaatcagacactatccaatttgactataagaaaagtatcagctgaccaatattcactttctgctc |
9138444 |
T |
|
| Q |
451 |
caaatcttagttcttttactattgatggtagttcnnnnnnncatcaactcttggcctccacatgcaatctttcttttcttcaacaagtaaatatgtttgg |
550 |
Q |
| |
|
|||||||||||||||||||||| |||| | || | || || ||| |||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
9138443 |
caaatcttagttcttttactatcgatgattgtcctatttttcagaaatccttatcctccacatgcaatctttcttttcttcaacaagtaaatatgtatgg |
9138344 |
T |
|
| Q |
551 |
cttttattcctatatcggggaagcttcaatcttcttaagatggctgcaagtgctggccaatgtaaagattttgagatttgactattctgtcattgaaaca |
650 |
Q |
| |
|
||| |||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||| ||| ||||| |||| | | |
|
|
| T |
9138343 |
ctt---ttccaataacggggaagcttcaatcttcttaagatggctgcaagtgcttgccaatgtcaagattttggaatttggttatgctgtctttgagaaa |
9138247 |
T |
|
| Q |
651 |
atacaaaaggtaggtgactgttgtgtactttgacatctatattttgattacacaaacatttgggtccttgaatatgttaatccgtgtaagtagtctttga |
750 |
Q |
| |
|
|||||||| ||| || ||| | ||||||||| ||||| ||||| |||||||||||||||| || |||| |||||||||||| |
|
|
| T |
9138246 |
atacaaaatgtaagtcactttagtgtacttt-------------------cacaatcattttggtccttgaatatgttggtcggtgttagtagtctttga |
9138166 |
T |
|
| Q |
751 |
atgtattacaaaaacatatccgaatttgtcatt |
783 |
Q |
| |
|
|||||||||||||||||||| ||| |||||||| |
|
|
| T |
9138165 |
atgtattacaaaaacatatctgaacttgtcatt |
9138133 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 170; E-Value: 8e-91
Query Start/End: Original strand, 126 - 472
Target Start/End: Complemental strand, 8359325 - 8358988
Alignment:
| Q |
126 |
aaatctgagttactccctttaatctttggctctcactctttgacatttcttgatctttcttattatagtaggtatgacgggtatgcaaagtgtccaaaat |
225 |
Q |
| |
|
|||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||| || |||||||||| ||||||||||||| |
|
|
| T |
8359325 |
aaatatgagttcctccctttaatctttggctctcactctttgacatttcttgagctttctt-------tagtta--acgggtatgcgaagtgtccaaaat |
8359235 |
T |
|
| Q |
226 |
ctcttcacttacctgcattaagaaccttgcatcttaattttttcagatttgttgtaactcacaatcattgtgctgacccttttccaaactgtcacgtgtt |
325 |
Q |
| |
|
|||||||| | |||||||||||||||||||||||||| | |||| |||||| ||||||| |||| ||||||||||| ||| |||||||||| ||||| |
|
|
| T |
8359234 |
ctcttcacctgcctgcattaagaaccttgcatcttaaatgcttcaactttgttacaactcactatcactgtgctgaccccttttcaaactgtcatgtgtt |
8359135 |
T |
|
| Q |
326 |
gaatactttggttctcgatggttgtattttgattgaggatgcacaagtcctctgcatatctaatcagacattatccaatttgactatatcctatgtatca |
425 |
Q |
| |
|
||| |||||| ||| | |||| ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| | |
|
|
| T |
8359134 |
gaacactttgcagctcaagtattgttctttgattgatgatgcacaaatcctctgcatatctaatcagacattatccaatttgactatatcctacgtatta |
8359035 |
T |
|
| Q |
426 |
gctgaccaatttttgctttctactccaaatcttagttcttttactat |
472 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||| ||||||||| |
|
|
| T |
8359034 |
gctgaccaattttcgctttctactccaaatcttagtttttttactat |
8358988 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 126 - 727
Target Start/End: Complemental strand, 43144641 - 43144043
Alignment:
| Q |
126 |
aaatctgagttactccctttaatctttggctctcactctttgacatttcttgatctttcttattatagtaggtatgacgggtatgcaaagtgtccaaaat |
225 |
Q |
| |
|
|||||||| |||||||||||||||| | ||||||||||||||||||||| | ||||| ||| || || || |||| |||| ||||||||||| |
|
|
| T |
43144641 |
aaatctgatttactccctttaatctcagtctctcactctttgacatttctcaagctttcatatg---gtcggaatttcggggttgcagtgtgtccaaaat |
43144545 |
T |
|
| Q |
226 |
ctcttcacttacctgcattaagaaccttgcatcttaattttttcagatttgttgtaactcacaatcattgtgctgacccttttccaaactgtcacgtgtt |
325 |
Q |
| |
|
|||| | ||| |||||||||||||| ||| |||| || | | ||| ||||||| ||| ||| |||| | ||||||||||||| |||||||||| | ||| |
|
|
| T |
43144544 |
ctctacgcttgcctgcattaagaactttgtatctcaaatatgtcaactttgttgcaacacaccatcactatgctgaccctttttcaaactgtcatgagtt |
43144445 |
T |
|
| Q |
326 |
gaatactttggttctcgatggttgtattttgattgaggatgcacaagtcctctgcatatctaatcagacattatccaatttgactatatcctatgtatca |
425 |
Q |
| |
|
|||| |||||| || | |||| ||||||| |||||||| ||||||| |||||||||||| | || | |||| ||| |||||||| | ||| || |
|
|
| T |
43144444 |
aaataatttggtacttagggattgttctttgattcaggatgcaaaagtcctttgcatatctaataatgcactttccagtttaactatatcttctgttgca |
43144345 |
T |
|
| Q |
426 |
gctgaccaatttttgctttctactccaaatcttagttcttttactattgatggtagttcnnnnnnncatcaactcttggcctccacatgcaatctttctt |
525 |
Q |
| |
|
||| | ||||||| ||||||||||||||||||| ||||||||| | ||||||| ||| ||||| |||| |||||||||||||||| |
|
|
| T |
43144344 |
gctcagcaattttcactttctactccaaatcttaagtcttttactttcttgggtagttttgtttttcataggctcttatcctcaacatgcaatctttctt |
43144245 |
T |
|
| Q |
526 |
ttcttcaacaagtaaatatgtttggcttttattcctatatcgg---ggaagcttcaatcttcttaagatggctgcaagtgctggccaatgtaaagatttt |
622 |
Q |
| |
|
||||||||||||||||||| |||| | | |||| ||| ||||||||||| |||||||||||||||||||||||| ||||| ||||||||||| |
|
|
| T |
43144244 |
ttcttcaacaagtaaatattgatggcctct---cctacatccacaaggaagcttcaaccttcttaagatggctgcaagtgcttgccaacgtaaagatttt |
43144148 |
T |
|
| Q |
623 |
gagatttgactattctgtcattgaaacaatacaaaaggtaggtgactgttgtgtactttgacatctatattttgattacacaaacatttgggtccttgaa |
722 |
Q |
| |
|
|| | ||| |||||| ||||| ||||||||||||| ||| || ||| | | |||||| || ||| ||||||||||| |||| ||||||||| |||| |
|
|
| T |
43144147 |
gaaaattggttattctctcattcaaacaatacaaaatgtaagttactttaatatactttcacctctttattttgattatacaattatttgggtctttgag |
43144048 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 126 - 538
Target Start/End: Complemental strand, 8356282 - 8355867
Alignment:
| Q |
126 |
aaatctgagttactccctttaatctttggctctcactctttgacatttcttgatctttcttattatagtaggtatgacgggtatgcaaagtgtccaaaat |
225 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||| | ||||| ||| |||||| ||| | || || | ||||||||||| |
|
|
| T |
8356282 |
aaatctgagttactccctttaatctcgacctctcactctttgacatttctcaagctttcatat---agtaggcatggctgggttgtagtgtgtccaaaat |
8356186 |
T |
|
| Q |
226 |
ctcttcacttacctgcattaagaaccttgcatcttaattttttcagatttgttgtaactcacaatcattgtgctgacccttttccaaactgtcacgtgtt |
325 |
Q |
| |
|
||||||| || |||||||||||||| |||||||| | | | ||| ||||||| ||||||| |||| | ||| ||||||||| |||||||||| | ||| |
|
|
| T |
8356185 |
ctcttcaatttcctgcattaagaactttgcatctcgaatgtgtcaactttgttgcaactcaccatcactatgccgaccctttttcaaactgtcatgagtt |
8356086 |
T |
|
| Q |
326 |
gaatactttggttctcgatggttgtattttgattgaggatgcacaagtcctctgcatatctaatcagacattatccaatttgactatatcctatg----- |
420 |
Q |
| |
|
||||||||||| || |||| ||||| ||||||||||| ||||||||||| |||||||||| | | || | || ||| | |||||||| || | |
|
|
| T |
8356085 |
aaatactttggtacttgatgattgtaaattgattgaggacgcacaagtcctttgcatatctagttatgcactttcaaatctaactatatcttacgtagca |
8355986 |
T |
|
| Q |
421 |
-tatcagctgaccaatttttgctttctactccaaatcttagttcttttactattgatggtagttcnnnnnnncatcaactcttggcctccacatgcaatc |
519 |
Q |
| |
|
|| ||||| ||||||||| ||||||||||||||||||||| |||||| || ||||| || ||||||||| || |||||| ||||||| |
|
|
| T |
8355985 |
ctagcagctcaccaattttcactttctactccaaatcttagtcattttaccatgtcgggtaggtctatttttcatcaactcctgttctccacttgcaatc |
8355886 |
T |
|
| Q |
520 |
tttcttttcttcaacaagt |
538 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
8355885 |
tttcttttcttcaacaagt |
8355867 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 126 - 292
Target Start/End: Complemental strand, 8354777 - 8354614
Alignment:
| Q |
126 |
aaatctgagttactccctttaatctttggctctcactctttgacatttcttgatctttcttattatagtaggtatgacgggtatgcaaagtgtccaaaat |
225 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| || || | | ||||||||||||||| |
|
|
| T |
8354777 |
aaatccgagttactccctttaatctttggctctcactctttgacatttcttgatct---ttgttatagtaggaataacacggagacaaagtgtccaaaat |
8354681 |
T |
|
| Q |
226 |
ctcttcacttacctgcattaagaaccttgcatcttaattttttcagatttgttgtaactcacaatca |
292 |
Q |
| |
|
|||||||||| |||||| |||||||||||||||| || | | ||| ||||||| ||||||| |||| |
|
|
| T |
8354680 |
ctcttcacttgcctgcagtaagaaccttgcatctcaaatgtgtcaactttgttgcaactcaccatca |
8354614 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 353 - 472
Target Start/End: Original strand, 8404193 - 8404315
Alignment:
| Q |
353 |
tttgattgaggatgcacaagtcctctgcatatctaatcagacattatccaatttgactata--tcctatgt-atcagctgaccaatttttgctttctact |
449 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| | |||| |||||||||| || || | ||||||||| |||||| |||||||||| |
|
|
| T |
8404193 |
tttgattgaggatgcacaagtcctctgcatatctaatcagacactgtccagtttgactatatttcacatatcatcagctgatgaattttcgctttctact |
8404292 |
T |
|
| Q |
450 |
ccaaatcttagttcttttactat |
472 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
8404293 |
ccaaatcttagttcttttactat |
8404315 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 573 - 767
Target Start/End: Original strand, 8404434 - 8404631
Alignment:
| Q |
573 |
gcttcaatcttcttaagatggctgcaagtgctggccaatgtaaagattttgagatttgactattctgtcattgaaacaatacaaaaggtaggtgactgtt |
672 |
Q |
| |
|
|||||| |||||||||| ||||| |||||||| ||||| ||||||||||||| | ||| || ||||||||| || ||||| | | ||| || ||| | |
|
|
| T |
8404434 |
gcttcagtcttcttaagttggcttcaagtgcttgccaacgtaaagattttgaaaattggttactctgtcattcaagcaatagactatgtaagtcacttta |
8404533 |
T |
|
| Q |
673 |
gtgtactttgacatctatattttga-ttacacaaacatttgggtccttgaatatgttaatccgtgtaa--gtagtctttgaatgtattacaaaaacat |
767 |
Q |
| |
|
|| |||||| || ||| |||||||| ||| |||| ||| ||||||||| ||||||||| | ||| | |||||||||||||||||||||||||||| |
|
|
| T |
8404534 |
gtatactttcacttctttattttgatttaaacaatcatctgggtccttaaatatgttagacgatgtcagcgtagtctttgaatgtattacaaaaacat |
8404631 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 232 - 389
Target Start/End: Complemental strand, 9577072 - 9576915
Alignment:
| Q |
232 |
acttacctgcattaagaaccttgcatcttaattttttcagatttgttgtaactcacaatcattgtgctgacccttttccaaactgtcacgtgttgaatac |
331 |
Q |
| |
|
|||| |||||||||||||||||||||||| | | ||| |||| || |||| ||| ||| |||||||| || ||| | ||||||| |||||||||||| |
|
|
| T |
9577072 |
acttgcctgcattaagaaccttgcatcttgaatacttctactttgctgcaactaacagtcactgtgctgatcccttttcgaactgtctcgtgttgaatac |
9576973 |
T |
|
| Q |
332 |
tttggttctcgatggttgtattttgattgaggatgcacaagtcctctgcatatctaat |
389 |
Q |
| |
|
||||| |||| | |||| ||||||| |||| ||||||||||||||||||||||| |
|
|
| T |
9576972 |
attggtgctcggttattgttgtttgattaaggaaacacaagtcctctgcatatctaat |
9576915 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 566 - 624
Target Start/End: Complemental strand, 8358894 - 8358836
Alignment:
| Q |
566 |
cggggaagcttcaatcttcttaagatggctgcaagtgctggccaatgtaaagattttga |
624 |
Q |
| |
|
|||| |||||||||||||||||| ||||||||||||||| |||||||| ||||||||| |
|
|
| T |
8358894 |
cgggaaagcttcaatcttcttaaaatggctgcaagtgcttgccaatgtcgagattttga |
8358836 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 188
Target Start/End: Original strand, 8403967 - 8404025
Alignment:
| Q |
130 |
ctgagttactccctttaatctttggctctcactctttgacatttcttgatctttcttat |
188 |
Q |
| |
|
|||||||||| ||||||||||| |||||||||||||||||||||||| ||||||||| |
|
|
| T |
8403967 |
ctgagttactacctttaatcttaacctctcactctttgacatttcttgagctttcttat |
8404025 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 718 - 783
Target Start/End: Complemental strand, 8035632 - 8035567
Alignment:
| Q |
718 |
ttgaatatgttaatccgtgtaagtagtctttgaatgtattacaaaaacatatccgaatttgtcatt |
783 |
Q |
| |
|
|||||||||||| | |||| ||||||||||||||||||||| |||||||||| ||| |||||||| |
|
|
| T |
8035632 |
ttgaatatgttagttggtgttagtagtctttgaatgtattacgaaaacatatctgaacttgtcatt |
8035567 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 495 - 544
Target Start/End: Complemental strand, 8358965 - 8358916
Alignment:
| Q |
495 |
caactcttggcctccacatgcaatctttcttttcttcaacaagtaaatat |
544 |
Q |
| |
|
|||||||| |||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
8358965 |
caactcttatcctccacatgtaatctttcttttcttcaacaagtaaatat |
8358916 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 606 - 711
Target Start/End: Original strand, 8418917 - 8419022
Alignment:
| Q |
606 |
gccaatgtaaagattttgagatttgactattctgtcattgaaacaatacaaaaggtaggtgactgttgtgtactttgacatctatattttgattacacaa |
705 |
Q |
| |
|
||||| |||||||||||| ||||| ||| | ||||| |||||||| |||| ||| |||||| | ||||||||| |||| |||||||||||||||||| |
|
|
| T |
8418917 |
gccaacgtaaagattttggaatttggttatggtatcattcaaacaataaaaaatgtaagtgactttagtgtactttcacatatatattttgattacacaa |
8419016 |
T |
|
| Q |
706 |
acattt |
711 |
Q |
| |
|
||||| |
|
|
| T |
8419017 |
tcattt |
8419022 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 496 - 544
Target Start/End: Original strand, 8404339 - 8404387
Alignment:
| Q |
496 |
aactcttggcctccacatgcaatctttcttttcttcaacaagtaaatat |
544 |
Q |
| |
|
||||||| |||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
8404339 |
aactcttatcctccacaagcaatctttcttttcttcaacaagtaaatat |
8404387 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 574 - 644
Target Start/End: Complemental strand, 9576762 - 9576690
Alignment:
| Q |
574 |
cttcaatcttcttaagat--ggctgcaagtgctggccaatgtaaagattttgagatttgactattctgtcatt |
644 |
Q |
| |
|
|||||||||||||| ||| ||||||||||||| |||||||| |||||||||| | || | ||||||||||| |
|
|
| T |
9576762 |
cttcaatcttcttaggatatggctgcaagtgcttgccaatgtcaagattttgaaacttaataattctgtcatt |
9576690 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 293; Significance: 1e-164; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 15 - 783
Target Start/End: Original strand, 33084063 - 33084820
Alignment:
| Q |
15 |
ctacttaatcttactattgatgcttgtatacaggaagatgaagagctatgtaaactcattaatataaatccgctactctctttgaaaattaaagagtat- |
113 |
Q |
| |
|
||||||||||||||| |||||| ||| || | ||||| ||| |||||||||||| |||| |||||||| || ||||||||||||||||| | | | |
|
|
| T |
33084063 |
ctacttaatcttactgttgatggttggatgctggaagg---agacctatgtaaactcgttaaaataaatccacttctctctttgaaaattaatgggcgtc |
33084159 |
T |
|
| Q |
114 |
ggaaat--tgtccaaaatctgagttac----tccctttaatctttggctctcactctttgacatttcttgatctttcttattatagtaggtatgacgggt |
207 |
Q |
| |
|
|| | ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| |||| || |
|
|
| T |
33084160 |
ggtcgtgctgtccaaaatctgagttacgtactccctttaatctttggctctcactctttgacatttcttgagctttcttat-------ggtagga----- |
33084247 |
T |
|
| Q |
208 |
atgcaaagtgtccaaaatctcttcacttacctgcattaagaaccttgcatcttaattttttcagatttgttgtaactcacaatcattgtgctgacccttt |
307 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||| || ||| |||||||||||||||||||||||| || |
|
|
| T |
33084248 |
atgcaaagtgtccaaaatctcttcacttgcctgcattaagaaccttgcatcttcaatttttcaacttctttgcaactcacaatcattgtgctgacccctt |
33084347 |
T |
|
| Q |
308 |
tccaaactgtcacgtgttgaatactttggttctcgatggttgtattttgattgaggatgcacaagtcctctgcatatctaatcagacattatccaatttg |
407 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||| |||||||||||| ||||||||||| |
|
|
| T |
33084348 |
tccaaactgtcacgtgttgaatactttggttctcagtggttgttctttgattgaggatgcacaagtcctctacatgtctaatcagacactatccaatttg |
33084447 |
T |
|
| Q |
408 |
actatatcctatgtatcagctgaccaatttttgctttctactccaaatcttagttcttttactattgatggtagttcnnnnnnncatcaactcttggcct |
507 |
Q |
| |
|
||||||| || ||||| ||||||||| || |||||||||||||||||||||||||||||||| | | || | || || ||| ||| |
|
|
| T |
33084448 |
actatatgttacatatcaactgaccaatattcactttctactccaaatcttagttcttttactatcagggattgtcctatttttcagaaatccttatcct |
33084547 |
T |
|
| Q |
508 |
ccacatgcaatctttcttttcttcaacaagtaaatatgtttggcttttattcctatatcggggaagcttcaatcttcttaagatggctgcaagtgctggc |
607 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||| |||| || ||| ||||||||||||||| ||||||||||||||||||| | |
|
|
| T |
33084548 |
ccacatgcaatctttcttttcttcaacaagtaaatatgtacggctt---ttccaatgacggagaagcttcaatcttcctaagatggctgcaagtgctttc |
33084644 |
T |
|
| Q |
608 |
caatgtaaagattttgagatttgactattctgtcattgaaacaatacaaaaggtaggtgactgttgtgtactttgacatctatattttgattacacaaac |
707 |
Q |
| |
|
|||||||||||||||| ||||| |||||| ||||||| | ||||||||| ||| |||||| | ||||||||| |||||||||||||||||||||| | |
|
|
| T |
33084645 |
caatgtaaagattttggaatttggttattctatcattgagaaaatacaaaatgtaagtgactttagtgtactttcgcatctatattttgattacacaatc |
33084744 |
T |
|
| Q |
708 |
atttgggtccttgaatatgttaatccgtgtaagtagtctttgaatgtattacaaaaacatatccgaatttgtcatt |
783 |
Q |
| |
|
||||||||| |||||||||||| || |||| ||||||||| || ||||||||||||||||||| ||| |||||||| |
|
|
| T |
33084745 |
atttgggtcgttgaatatgttagtcggtgttagtagtcttcgattgtattacaaaaacatatctgaaattgtcatt |
33084820 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 211 - 459
Target Start/End: Original strand, 24845330 - 24845577
Alignment:
| Q |
211 |
caaagtgtccaaaatctcttcacttacctgcattaagaaccttgcatcttaattttttcagatttgttgtaactcacaatcattgtgctgacccttttcc |
310 |
Q |
| |
|
||||||||||||||||||||||||| |||||| |||||||||||||||| || | | ||| ||||| | ||||||| |||| | |||||| |||||| | |
|
|
| T |
24845330 |
caaagtgtccaaaatctcttcacttgcctgcagtaagaaccttgcatctcaaatgtgtcaactttgtagcaactcaccatcactatgctga-cctttttc |
24845428 |
T |
|
| Q |
311 |
aaactgtcacgtgttgaatactttggttctcgatggttgtattttgattgaggatgcacaagtcctctgcatatctaatcagacattatccaatttgact |
410 |
Q |
| |
|
||||||||| ||||| |||||||| || || ||| || |||| ||||||||||||| |||| ||||||||| || || | |||||| | ||| |
|
|
| T |
24845429 |
aaactgtcatgtgttaaatactttagtacttactgggtgctcattgagtgaggatgcacaaatcctttgcatatctgattctgcactttccaatctaact |
24845528 |
T |
|
| Q |
411 |
atatcctatgtatcagctgaccaatttttgctttctactccaaatctta |
459 |
Q |
| |
|
||||| || ||||||||| |||||||| |||||||||||||||||||| |
|
|
| T |
24845529 |
atatcttacgtatcagcttgccaattttcgctttctactccaaatctta |
24845577 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 130 - 188
Target Start/End: Original strand, 24844593 - 24844651
Alignment:
| Q |
130 |
ctgagttactccctttaatctttggctctcactctttgacatttcttgatctttcttat |
188 |
Q |
| |
|
||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
24844593 |
ctgagttactctcttcaatctttggctctcattctttgacatttcttgatctttcttat |
24844651 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 576 - 624
Target Start/End: Original strand, 24845660 - 24845708
Alignment:
| Q |
576 |
tcaatcttcttaagatggctgcaagtgctggccaatgtaaagattttga |
624 |
Q |
| |
|
||||||||||||| ||||||||||||||| ||||||| |||||||||| |
|
|
| T |
24845660 |
tcaatcttcttaaaatggctgcaagtgctttccaatgtgaagattttga |
24845708 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 57; Significance: 2e-23; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 218 - 414
Target Start/End: Original strand, 5476606 - 5476802
Alignment:
| Q |
218 |
tccaaaatctcttcacttacctgcattaagaaccttgcatcttaattttttcagatttgttgtaactcacaatcattgtgctgacccttttccaaactgt |
317 |
Q |
| |
|
|||||||||||| || || |||||||||||||| || |||||| | | ||| ||||||| ||||| | |||| | || ||| || ||| ||||| | |
|
|
| T |
5476606 |
tccaaaatctctacatttgcctgcattaagaactttacatcttgaatacgtcaactttgttgcaactcgcgatcactatgttgatcccttttcaaacctt |
5476705 |
T |
|
| Q |
318 |
cacgtgttgaatactttggttctcgatggttgtattttgattgaggatgcacaagtcctctgcatatctaatcagacattatccaatttgactatat |
414 |
Q |
| |
|
|| | ||||||||||||||| ||| ||||| ||||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||| |
|
|
| T |
5476706 |
catgcgttgaatactttggtgctcaggtgttgttatttgattgaggatgcactagtcctctgcatatctaatcagacactgtccaatttgactatat |
5476802 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 570 - 767
Target Start/End: Original strand, 5476994 - 5477194
Alignment:
| Q |
570 |
gaagcttcaatcttcttaagatggctgcaagtgctggccaatgtaaagattttgagatttgactattctgtcattgaaacaatacaaaaggtaggtgact |
669 |
Q |
| |
|
||||||||| |||||||||| ||||| |||||||| || || ||||||||||||| | ||| || ||| ||||| || ||||| | || ||| || ||| |
|
|
| T |
5476994 |
gaagcttcagtcttcttaagttggcttcaagtgcttgcgaacgtaaagattttgaaaattggttactctatcattcaagcaatagacaatgtaagtcact |
5477093 |
T |
|
| Q |
670 |
gttgtgtactttgacatctatattttgatt-acacaaacatttgggtccttgaatatgttaatccgtgtaa--gtagtctttgaatgtattacaaaaaca |
766 |
Q |
| |
|
| || |||||| || ||| |||||||||| | |||| ||||||||||||| ||||||||| | || || ||||||||||||||||||||||||||| |
|
|
| T |
5477094 |
ctagtatactttcacttctttattttgattaaaacaatcatttgggtccttaaatatgttagacgatgcaagtgtagtctttgaatgtattacaaaaaca |
5477193 |
T |
|
| Q |
767 |
t |
767 |
Q |
| |
|
| |
|
|
| T |
5477194 |
t |
5477194 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 499 - 544
Target Start/End: Original strand, 5476902 - 5476947
Alignment:
| Q |
499 |
tcttggcctccacatgcaatctttcttttcttcaacaagtaaatat |
544 |
Q |
| |
|
||||| |||| |||||||||||||| |||||||||||||||||||| |
|
|
| T |
5476902 |
tcttgtcctcaacatgcaatctttcctttcttcaacaagtaaatat |
5476947 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 188
Target Start/End: Original strand, 5476502 - 5476564
Alignment:
| Q |
126 |
aaatctgagttactccctttaatctttggctctcactctttgacatttcttgatctttcttat |
188 |
Q |
| |
|
|||||||| |||||||||||||| || | |||| |||| |||||||| ||||| ||||||||| |
|
|
| T |
5476502 |
aaatctgatttactccctttaattttagcctctaactccttgacattccttgagctttcttat |
5476564 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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