View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1441R-Insertion-11 (Length: 380)

Name: NF1441R-Insertion-11
Description: NF1441R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1441R-Insertion-11
NF1441R-Insertion-11
[»] chr5 (36 HSPs)
chr5 (8-138)||(16883439-16883567)
chr5 (289-380)||(16883747-16883838)
chr5 (288-332)||(3398218-3398262)
chr5 (288-332)||(18841841-18841885)
chr5 (288-331)||(24014823-24014866)
chr5 (288-331)||(29856005-29856048)
chr5 (288-329)||(3738011-3738052)
chr5 (292-333)||(26376709-26376750)
chr5 (139-183)||(16883588-16883632)
chr5 (297-346)||(2795508-2795557)
chr5 (288-333)||(11250092-11250137)
chr5 (296-333)||(11636729-11636766)
chr5 (288-333)||(30328462-30328507)
chr5 (297-333)||(14466634-14466670)
chr5 (297-333)||(30839779-30839815)
chr5 (297-333)||(31366096-31366132)
chr5 (297-333)||(36597577-36597613)
chr5 (288-332)||(40166250-40166294)
chr5 (146-188)||(2795664-2795706)
chr5 (149-187)||(32019982-32020020)
chr5 (288-330)||(33072677-33072719)
chr5 (288-330)||(39043150-39043192)
chr5 (297-331)||(40512951-40512985)
chr5 (151-188)||(3398361-3398398)
chr5 (151-188)||(4047553-4047590)
chr5 (296-333)||(5958267-5958304)
chr5 (288-329)||(11692767-11692808)
chr5 (296-333)||(18150376-18150413)
chr5 (288-328)||(8103715-8103755)
chr5 (148-188)||(12641990-12642030)
chr5 (296-332)||(15241236-15241272)
chr5 (288-332)||(16160889-16160933)
chr5 (288-332)||(26265182-26265226)
chr5 (151-187)||(30839923-30839959)
chr5 (151-179)||(34333183-34333211)
chr5 (151-187)||(36597721-36597757)
[»] chr8 (57 HSPs)
chr8 (288-333)||(38843701-38843746)
chr8 (288-332)||(45005968-45006012)
chr8 (288-338)||(38213081-38213131)
chr8 (288-332)||(9580245-9580289)
chr8 (288-331)||(7750667-7750710)
chr8 (288-330)||(26682068-26682110)
chr8 (288-333)||(36967206-36967251)
chr8 (288-332)||(11117133-11117177)
chr8 (296-332)||(12131981-12132017)
chr8 (288-332)||(12189724-12189768)
chr8 (288-332)||(12434152-12434196)
chr8 (297-332)||(31812111-31812146)
chr8 (288-331)||(34869658-34869701)
chr8 (290-332)||(11923013-11923055)
chr8 (146-188)||(40225982-40226024)
chr8 (297-342)||(2161376-2161421)
chr8 (288-329)||(5911983-5912024)
chr8 (293-330)||(11977281-11977318)
chr8 (296-333)||(14816269-14816306)
chr8 (296-333)||(14829434-14829471)
chr8 (292-329)||(23840237-23840274)
chr8 (288-329)||(33430249-33430290)
chr8 (147-188)||(38212940-38212981)
chr8 (297-333)||(3306199-3306235)
chr8 (288-332)||(8284705-8284749)
chr8 (296-332)||(13496876-13496912)
chr8 (151-187)||(26834703-26834739)
chr8 (288-332)||(32186184-32186228)
chr8 (288-332)||(38527819-38527863)
chr8 (288-332)||(43717688-43717732)
chr8 (297-332)||(7140603-7140638)
chr8 (297-332)||(10129102-10129137)
chr8 (292-330)||(12346006-12346044)
chr8 (296-330)||(35678418-35678452)
chr8 (288-330)||(37523758-37523800)
chr8 (146-187)||(2161529-2161570)
chr8 (151-188)||(7140459-7140496)
chr8 (151-188)||(10129244-10129281)
chr8 (288-329)||(11947035-11947076)
chr8 (151-188)||(13496709-13496746)
chr8 (151-188)||(18567416-18567453)
chr8 (151-188)||(22838366-22838403)
chr8 (151-188)||(27874681-27874718)
chr8 (151-188)||(28014858-28014895)
chr8 (151-188)||(31812254-31812291)
chr8 (151-187)||(3306055-3306091)
chr8 (152-188)||(13327942-13327978)
chr8 (297-333)||(13328085-13328121)
chr8 (297-333)||(19343981-19344017)
chr8 (151-187)||(26682210-26682246)
chr8 (301-333)||(26834558-26834590)
chr8 (152-188)||(28866932-28866968)
chr8 (151-179)||(29642753-29642781)
chr8 (297-333)||(33514645-33514681)
chr8 (297-329)||(39701947-39701979)
chr8 (297-333)||(40210965-40211001)
chr8 (297-333)||(40716272-40716308)
[»] chr7 (37 HSPs)
chr7 (288-333)||(4969770-4969815)
chr7 (288-333)||(29398250-29398295)
chr7 (288-332)||(29692676-29692720)
chr7 (288-332)||(45501457-45501501)
chr7 (288-325)||(39475853-39475890)
chr7 (288-329)||(47457597-47457638)
chr7 (288-330)||(19868114-19868156)
chr7 (288-333)||(19889338-19889383)
chr7 (288-328)||(820673-820713)
chr7 (297-333)||(9331959-9331995)
chr7 (297-333)||(24250311-24250347)
chr7 (297-333)||(33342986-33343022)
chr7 (297-333)||(34270263-34270299)
chr7 (295-330)||(2444049-2444084)
chr7 (149-188)||(45501600-45501639)
chr7 (297-332)||(46290009-46290044)
chr7 (146-188)||(3561873-3561915)
chr7 (295-333)||(24857497-24857535)
chr7 (150-188)||(25709398-25709436)
chr7 (288-330)||(26300573-26300615)
chr7 (146-188)||(39757105-39757147)
chr7 (298-332)||(47120339-47120373)
chr7 (151-188)||(820541-820578)
chr7 (151-188)||(4969914-4969951)
chr7 (288-333)||(5909417-5909462)
chr7 (288-333)||(7170000-7170045)
chr7 (151-188)||(9332102-9332139)
chr7 (291-332)||(27696705-27696746)
chr7 (297-330)||(39757254-39757287)
chr7 (296-333)||(39869120-39869157)
chr7 (297-329)||(3562022-3562054)
chr7 (297-333)||(32117812-32117848)
chr7 (151-187)||(32117956-32117992)
chr7 (151-187)||(33343130-33343166)
chr7 (151-187)||(34270403-34270439)
chr7 (297-329)||(36548604-36548636)
chr7 (151-187)||(46290152-46290188)
[»] chr6 (29 HSPs)
chr6 (288-333)||(24979285-24979330)
chr6 (288-332)||(34692352-34692396)
chr6 (288-333)||(30623323-30623368)
chr6 (297-333)||(18332833-18332869)
chr6 (288-331)||(1814917-1814960)
chr6 (288-329)||(4371840-4371881)
chr6 (288-333)||(6016853-6016898)
chr6 (288-333)||(17596310-17596355)
chr6 (296-333)||(29863446-29863483)
chr6 (296-333)||(31791060-31791097)
chr6 (297-333)||(14228270-14228306)
chr6 (297-333)||(17552731-17552767)
chr6 (297-333)||(33017722-33017758)
chr6 (297-332)||(8977611-8977646)
chr6 (297-328)||(10887031-10887062)
chr6 (149-188)||(10887170-10887209)
chr6 (297-332)||(28943913-28943948)
chr6 (297-331)||(5363037-5363071)
chr6 (146-188)||(34692495-34692537)
chr6 (298-331)||(2086999-2087032)
chr6 (151-188)||(29863302-29863339)
chr6 (151-187)||(3853085-3853121)
chr6 (296-332)||(10345683-10345719)
chr6 (296-332)||(12220548-12220584)
chr6 (151-187)||(14228126-14228162)
chr6 (151-187)||(17552587-17552623)
chr6 (297-333)||(26602575-26602611)
chr6 (151-187)||(28943769-28943805)
chr6 (297-333)||(31568110-31568146)
[»] chr4 (46 HSPs)
chr4 (288-333)||(45742365-45742410)
chr4 (288-332)||(17409822-17409866)
chr4 (288-332)||(23545474-23545518)
chr4 (288-331)||(19468193-19468236)
chr4 (288-333)||(19451036-19451081)
chr4 (288-333)||(27019257-27019302)
chr4 (292-332)||(3085350-3085390)
chr4 (288-333)||(8736946-8736991)
chr4 (288-333)||(16667520-16667565)
chr4 (288-329)||(19838825-19838866)
chr4 (297-333)||(54495782-54495818)
chr4 (146-188)||(4779431-4779473)
chr4 (288-330)||(6875501-6875543)
chr4 (292-330)||(24243029-24243067)
chr4 (146-188)||(47326887-47326929)
chr4 (146-188)||(47341683-47341725)
chr4 (151-188)||(3085811-3085848)
chr4 (288-333)||(9971700-9971745)
chr4 (292-333)||(31955898-31955939)
chr4 (288-333)||(47327028-47327073)
chr4 (288-333)||(47341824-47341869)
chr4 (288-329)||(51691343-51691384)
chr4 (288-332)||(2096869-2096913)
chr4 (288-332)||(24684834-24684878)
chr4 (296-332)||(40049557-40049593)
chr4 (288-332)||(48910970-48911014)
chr4 (297-333)||(50352300-50352336)
chr4 (291-333)||(3726934-3726976)
chr4 (297-331)||(9759286-9759320)
chr4 (295-329)||(16069348-16069382)
chr4 (146-188)||(35999942-35999984)
chr4 (146-176)||(46803952-46803982)
chr4 (151-184)||(4329739-4329772)
chr4 (288-333)||(7349686-7349731)
chr4 (151-188)||(18882267-18882304)
chr4 (151-184)||(27019405-27019438)
chr4 (151-188)||(27362532-27362569)
chr4 (151-188)||(29190816-29190853)
chr4 (288-329)||(33632338-33632379)
chr4 (288-329)||(53376549-53376590)
chr4 (151-188)||(54495637-54495674)
chr4 (152-188)||(16667385-16667421)
chr4 (297-329)||(23553571-23553603)
chr4 (152-188)||(48910803-48910839)
chr4 (297-333)||(49228354-49228390)
chr4 (297-333)||(49332330-49332366)
[»] chr3 (42 HSPs)
chr3 (288-333)||(50204400-50204445)
chr3 (288-332)||(42180050-42180094)
chr3 (288-330)||(54527842-54527884)
chr3 (288-333)||(8165643-8165688)
chr3 (282-331)||(24086983-24087032)
chr3 (288-333)||(51567954-51567999)
chr3 (288-332)||(51618048-51618092)
chr3 (288-331)||(27549537-27549580)
chr3 (295-333)||(51400165-51400203)
chr3 (288-323)||(8497559-8497594)
chr3 (297-332)||(38389445-38389480)
chr3 (291-333)||(26499567-26499609)
chr3 (146-188)||(33474468-33474510)
chr3 (288-333)||(11610912-11610957)
chr3 (292-333)||(40930054-40930095)
chr3 (297-333)||(3863327-3863363)
chr3 (297-332)||(2571267-2571302)
chr3 (297-332)||(12515618-12515653)
chr3 (291-330)||(15664992-15665031)
chr3 (296-331)||(39365275-39365310)
chr3 (288-330)||(35415157-35415199)
chr3 (295-333)||(36426554-36426592)
chr3 (150-188)||(40930192-40930230)
chr3 (288-321)||(2379205-2379238)
chr3 (151-188)||(3863470-3863507)
chr3 (297-330)||(20938057-20938090)
chr3 (147-176)||(20938210-20938239)
chr3 (151-188)||(23523087-23523124)
chr3 (288-333)||(37444144-37444189)
chr3 (151-188)||(38389588-38389625)
chr3 (288-333)||(47386919-47386964)
chr3 (151-188)||(50204544-50204581)
chr3 (151-188)||(51618188-51618225)
chr3 (151-187)||(2571410-2571446)
chr3 (152-188)||(8165787-8165823)
chr3 (151-187)||(10307908-10307944)
chr3 (297-333)||(13495291-13495327)
chr3 (292-333)||(28992917-28992960)
chr3 (148-188)||(35414806-35414846)
chr3 (288-332)||(46845576-46845620)
chr3 (297-329)||(51339328-51339360)
chr3 (152-184)||(54016169-54016201)
[»] chr1 (44 HSPs)
chr1 (288-333)||(3168204-3168249)
chr1 (288-332)||(6180184-6180228)
chr1 (288-332)||(7824994-7825038)
chr1 (288-333)||(13321873-13321918)
chr1 (288-333)||(23591695-23591740)
chr1 (288-332)||(22167333-22167377)
chr1 (288-332)||(35512723-35512767)
chr1 (295-332)||(22331621-22331658)
chr1 (288-329)||(25186840-25186881)
chr1 (288-333)||(38812737-38812782)
chr1 (288-332)||(30171877-30171921)
chr1 (288-332)||(30187418-30187462)
chr1 (297-333)||(34801965-34802001)
chr1 (290-332)||(23808433-23808475)
chr1 (287-333)||(25532206-25532252)
chr1 (151-188)||(13322017-13322054)
chr1 (291-332)||(34050422-34050463)
chr1 (288-333)||(39150462-39150507)
chr1 (297-333)||(1502864-1502900)
chr1 (147-187)||(23591840-23591880)
chr1 (288-328)||(41624832-41624872)
chr1 (297-333)||(51382369-51382405)
chr1 (297-332)||(313748-313783)
chr1 (282-332)||(399552-399602)
chr1 (146-188)||(38812881-38812923)
chr1 (297-331)||(44918024-44918058)
chr1 (151-188)||(313890-313927)
chr1 (151-188)||(6180327-6180364)
chr1 (296-333)||(6307500-6307537)
chr1 (151-188)||(6569985-6570022)
chr1 (288-333)||(6754469-6754514)
chr1 (288-333)||(17919451-17919496)
chr1 (151-188)||(25465299-25465336)
chr1 (151-188)||(30172020-30172057)
chr1 (151-188)||(30187561-30187598)
chr1 (288-329)||(31737669-31737710)
chr1 (151-188)||(34802108-34802145)
chr1 (151-188)||(35512866-35512903)
chr1 (151-188)||(41624970-41625007)
chr1 (147-176)||(51920427-51920456)
chr1 (151-187)||(1502720-1502756)
chr1 (152-188)||(5875216-5875252)
chr1 (151-187)||(23576414-23576450)
chr1 (297-329)||(32716307-32716339)
[»] chr2 (43 HSPs)
chr2 (288-332)||(26003627-26003671)
chr2 (288-329)||(7720116-7720157)
chr2 (288-333)||(16754968-16755013)
chr2 (292-333)||(43806357-43806398)
chr2 (288-333)||(36612867-36612912)
chr2 (288-333)||(36620718-36620763)
chr2 (288-332)||(38148337-38148381)
chr2 (149-188)||(23932706-23932745)
chr2 (146-188)||(5853458-5853500)
chr2 (146-188)||(16493527-16493569)
chr2 (146-188)||(22704678-22704720)
chr2 (292-333)||(29981364-29981405)
chr2 (147-188)||(45062339-45062380)
chr2 (297-333)||(12016664-12016700)
chr2 (296-332)||(15411766-15411802)
chr2 (297-333)||(16126703-16126739)
chr2 (297-333)||(19228423-19228459)
chr2 (296-332)||(23932563-23932599)
chr2 (297-333)||(26229997-26230033)
chr2 (288-332)||(27665179-27665223)
chr2 (296-332)||(35729114-35729150)
chr2 (297-332)||(5583702-5583737)
chr2 (288-327)||(8064842-8064881)
chr2 (297-332)||(10690781-10690816)
chr2 (149-188)||(11660892-11660931)
chr2 (297-332)||(16919298-16919333)
chr2 (297-332)||(22705453-22705488)
chr2 (297-332)||(39904192-39904227)
chr2 (146-188)||(15231972-15232014)
chr2 (151-188)||(6109530-6109567)
chr2 (151-188)||(8065264-8065301)
chr2 (151-188)||(12016807-12016844)
chr2 (296-329)||(12919495-12919528)
chr2 (151-188)||(16126559-16126596)
chr2 (296-333)||(29795055-29795092)
chr2 (151-188)||(43388481-43388518)
chr2 (288-333)||(43388902-43388947)
chr2 (151-187)||(4576326-4576362)
chr2 (288-332)||(14377423-14377467)
chr2 (296-332)||(20566161-20566197)
chr2 (151-187)||(24729577-24729613)
chr2 (151-187)||(29157829-29157865)
chr2 (151-187)||(38248420-38248456)
[»] scaffold0129 (1 HSPs)
scaffold0129 (288-332)||(13794-13838)
[»] scaffold0036 (2 HSPs)
scaffold0036 (147-188)||(94014-94055)
scaffold0036 (288-329)||(94154-94195)
[»] scaffold0028 (1 HSPs)
scaffold0028 (288-333)||(31836-31881)
[»] scaffold0111 (2 HSPs)
scaffold0111 (297-332)||(37259-37294)
scaffold0111 (151-188)||(37114-37151)
[»] scaffold0061 (2 HSPs)
scaffold0061 (297-333)||(52923-52959)
scaffold0061 (151-188)||(52779-52816)
[»] scaffold0017 (2 HSPs)
scaffold0017 (297-333)||(145675-145711)
scaffold0017 (151-188)||(145818-145855)
[»] scaffold0631 (1 HSPs)
scaffold0631 (288-329)||(443-484)
[»] scaffold0011 (2 HSPs)
scaffold0011 (151-188)||(13226-13263)
scaffold0011 (297-333)||(13083-13119)
[»] scaffold0009 (1 HSPs)
scaffold0009 (297-330)||(193377-193410)
[»] scaffold0007 (1 HSPs)
scaffold0007 (150-179)||(2447-2476)
[»] scaffold0727 (1 HSPs)
scaffold0727 (297-329)||(5692-5724)
[»] scaffold0305 (1 HSPs)
scaffold0305 (302-330)||(17951-17979)


Alignment Details
Target: chr5 (Bit Score: 116; Significance: 6e-59; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 8 - 138
Target Start/End: Original strand, 16883439 - 16883567
Alignment:
Q  8 aattactgtaaatttgtgtaatgttttatgcacaaaaatacttattcaaaaaactgcggacaattctttcctgcatacaacttgttcaatctcagcatat 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  16883439 aattactgtaaatttgtgtaatgttttatgcacaaaaatacttattcaaaaaactgcggacaattctttcctgcatacaacttgttcgatctcagcatat 16883538  T
Q  108 gcaacatgtgttaactgaatttgatttcagc 138  Q
    |||||  ||||||||||||||||||||||||    
T  16883539 gcaac--gtgttaactgaatttgatttcagc 16883567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 289 - 380
Target Start/End: Original strand, 16883747 - 16883838
Alignment:
Q  289 tagttgttttaacatgtgcaatgttgcacatgttagacaaaccctgctaatataacatatctgcaacttgtacttgcagacatcctttacag 380  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  16883747 tagttgttttaacatgtgcaatgttgcacatgttagacaaaccctactaatataacttatctgcaacttgtacttgcagacatcctttacag 16883838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 288 - 332
Target Start/End: Complemental strand, 3398262 - 3398218
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 332  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  3398262 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 3398218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 288 - 332
Target Start/End: Original strand, 18841841 - 18841885
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 332  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  18841841 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 18841885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 288 - 331
Target Start/End: Original strand, 24014823 - 24014866
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaacc 331  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  24014823 ttagttgttttaacatgtgcaatgttgcacatgttagacaaacc 24014866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 288 - 331
Target Start/End: Original strand, 29856005 - 29856048
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaacc 331  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  29856005 ttagttgttttaacatgtgcaatgttgcacatgttagagaaacc 29856048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 288 - 329
Target Start/End: Original strand, 3738011 - 3738052
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaa 329  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  3738011 ttagttgttttaacatgtgcaatgttgcacatattagacaaa 3738052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 292 - 333
Target Start/End: Original strand, 26376709 - 26376750
Alignment:
Q  292 ttgttttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  26376709 ttgttttaacatgtacaatgttgcacatgttagacaaaccct 26376750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 16883588 - 16883632
Alignment:
Q  139 atactactatgagtttttctatcatgtgcaaatttgcatatttta 183  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||    
T  16883588 atactactatgagtttttctatcatgtacaaatttgcacatttta 16883632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 297 - 346
Target Start/End: Complemental strand, 2795557 - 2795508
Alignment:
Q  297 ttaacatgtgcaatgttgcacatgttagacaaaccctgctaatataacat 346  Q
    |||||||||||||| ||||||||||||||||||||||  |||||| ||||    
T  2795557 ttaacatgtgcaatattgcacatgttagacaaacccttttaatattacat 2795508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 288 - 333
Target Start/End: Original strand, 11250092 - 11250137
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    ||||||| ||||||||||||||| |||||||||||| |||||||||    
T  11250092 ttagttgctttaacatgtgcaatattgcacatgttaaacaaaccct 11250137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 296 - 333
Target Start/End: Complemental strand, 11636766 - 11636729
Alignment:
Q  296 tttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  11636766 tttaacatgtgcaatattgcacatgttagacaaaccct 11636729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 288 - 333
Target Start/End: Original strand, 30328462 - 30328507
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    |||||| | |||||||||||||| ||||||||||||||||||||||    
T  30328462 ttagttatcttaacatgtgcaatattgcacatgttagacaaaccct 30328507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 333
Target Start/End: Original strand, 14466634 - 14466670
Alignment:
Q  297 ttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    |||||||||||||| ||||||||||||||||||||||    
T  14466634 ttaacatgtgcaatattgcacatgttagacaaaccct 14466670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 333
Target Start/End: Complemental strand, 30839815 - 30839779
Alignment:
Q  297 ttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    |||||||||||||| ||||||||||||||||||||||    
T  30839815 ttaacatgtgcaatattgcacatgttagacaaaccct 30839779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 333
Target Start/End: Original strand, 31366096 - 31366132
Alignment:
Q  297 ttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    |||||||||||||| ||||||||||||||||||||||    
T  31366096 ttaacatgtgcaatattgcacatgttagacaaaccct 31366132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 333
Target Start/End: Complemental strand, 36597613 - 36597577
Alignment:
Q  297 ttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    |||||||||||||| ||||||||||||||||||||||    
T  36597613 ttaacatgtgcaatattgcacatgttagacaaaccct 36597577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 332
Target Start/End: Complemental strand, 40166294 - 40166250
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 332  Q
    |||||||||||||||||||||||  | ||||||||||||||||||    
T  40166294 ttagttgttttaacatgtgcaatactccacatgttagacaaaccc 40166250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 188
Target Start/End: Complemental strand, 2795706 - 2795664
Alignment:
Q  146 tatgagtttttctatcatgtgcaaatttgcatattttaagaag 188  Q
    |||| |||||||||||||||||||||||||| || ||||||||    
T  2795706 tatgggtttttctatcatgtgcaaatttgcacatgttaagaag 2795664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 187
Target Start/End: Original strand, 32019982 - 32020020
Alignment:
Q  149 gagtttttctatcatgtgcaaatttgcatattttaagaa 187  Q
    |||||||||||||||||||||||||||| || |||||||    
T  32019982 gagtttttctatcatgtgcaaatttgcacatgttaagaa 32020020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 330
Target Start/End: Complemental strand, 33072719 - 33072677
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaac 330  Q
    ||||||| ||||||||||||||| |||||||||||| ||||||    
T  33072719 ttagttgatttaacatgtgcaatattgcacatgttaaacaaac 33072677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 330
Target Start/End: Complemental strand, 39043192 - 39043150
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaac 330  Q
    |||||||||||||||| ||||||| ||||||||||||| ||||    
T  39043192 ttagttgttttaacatatgcaatggtgcacatgttagataaac 39043150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 331
Target Start/End: Complemental strand, 40512985 - 40512951
Alignment:
Q  297 ttaacatgtgcaatgttgcacatgttagacaaacc 331  Q
    |||||||||||||| ||||||||||||||||||||    
T  40512985 ttaacatgtgcaatattgcacatgttagacaaacc 40512951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 188
Target Start/End: Complemental strand, 3398398 - 3398361
Alignment:
Q  151 gtttttctatcatgtgcaaatttgcatattttaagaag 188  Q
    |||||||||||||||||||||||||| || ||||||||    
T  3398398 gtttttctatcatgtgcaaatttgcacatgttaagaag 3398361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 188
Target Start/End: Complemental strand, 4047590 - 4047553
Alignment:
Q  151 gtttttctatcatgtgcaaatttgcatattttaagaag 188  Q
    |||||||||||||||||||||||||| || ||||||||    
T  4047590 gtttttctatcatgtgcaaatttgcacatgttaagaag 4047553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 333
Target Start/End: Original strand, 5958267 - 5958304
Alignment:
Q  296 tttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    ||||||||||| ||| ||||||||||||||||||||||    
T  5958267 tttaacatgtgtaatattgcacatgttagacaaaccct 5958304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 329
Target Start/End: Original strand, 11692767 - 11692808
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaa 329  Q
    |||||| |||||||||||||||| ||| ||||||||||||||    
T  11692767 ttagttattttaacatgtgcaatattgtacatgttagacaaa 11692808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 333
Target Start/End: Complemental strand, 18150413 - 18150376
Alignment:
Q  296 tttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    |||||||| |||||| ||||||||||||||||||||||    
T  18150413 tttaacatatgcaatattgcacatgttagacaaaccct 18150376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 328
Target Start/End: Original strand, 8103715 - 8103755
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaa 328  Q
    |||||||  |||||||||||||| |||||||||||||||||    
T  8103715 ttagttgccttaacatgtgcaatattgcacatgttagacaa 8103755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 148 - 188
Target Start/End: Original strand, 12641990 - 12642030
Alignment:
Q  148 tgagtttttctatcatgtgcaaatttgcatattttaagaag 188  Q
    ||||||||||||| ||||||||||||||| || ||||||||    
T  12641990 tgagtttttctataatgtgcaaatttgcacatgttaagaag 12642030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 332
Target Start/End: Original strand, 15241236 - 15241272
Alignment:
Q  296 tttaacatgtgcaatgttgcacatgttagacaaaccc 332  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  15241236 tttaacatgtgcaatattgcatatgttagacaaaccc 15241272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 332
Target Start/End: Complemental strand, 16160933 - 16160889
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 332  Q
    ||||||||||||||||||||||| || ||||||||  ||||||||    
T  16160933 ttagttgttttaacatgtgcaatattacacatgttttacaaaccc 16160889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 332
Target Start/End: Original strand, 26265182 - 26265226
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 332  Q
    |||||||||||||||| | |||||||  |||||||||||||||||    
T  26265182 ttagttgttttaacatatacaatgttaaacatgttagacaaaccc 26265226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 187
Target Start/End: Complemental strand, 30839959 - 30839923
Alignment:
Q  151 gtttttctatcatgtgcaaatttgcatattttaagaa 187  Q
    |||||||||||||||||||||||||| || |||||||    
T  30839959 gtttttctatcatgtgcaaatttgcacatgttaagaa 30839923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 179
Target Start/End: Original strand, 34333183 - 34333211
Alignment:
Q  151 gtttttctatcatgtgcaaatttgcatat 179  Q
    |||||||||||||||||||||||||||||    
T  34333183 gtttttctatcatgtgcaaatttgcatat 34333211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 187
Target Start/End: Complemental strand, 36597757 - 36597721
Alignment:
Q  151 gtttttctatcatgtgcaaatttgcatattttaagaa 187  Q
    |||||||||||||||||||||||||| || |||||||    
T  36597757 gtttttctatcatgtgcaaatttgcacatgttaagaa 36597721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 4e-17; HSPs: 57)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 288 - 333
Target Start/End: Complemental strand, 38843746 - 38843701
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  38843746 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 38843701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 288 - 332
Target Start/End: Complemental strand, 45006012 - 45005968
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 332  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  45006012 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 45005968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 288 - 338
Target Start/End: Original strand, 38213081 - 38213131
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccctgctaa 338  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  38213081 ttagttgttttaacatgtgcaatgttgcacatgttaaacaaacccttctaa 38213131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 288 - 332
Target Start/End: Original strand, 9580245 - 9580289
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 332  Q
    |||||||||||||||||||||||||||||||| ||||||||||||    
T  9580245 ttagttgttttaacatgtgcaatgttgcacatattagacaaaccc 9580289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 288 - 331
Target Start/End: Complemental strand, 7750710 - 7750667
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaacc 331  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  7750710 ttagttgttttaacatgtgcaatattgcacatgttagacaaacc 7750667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 288 - 330
Target Start/End: Complemental strand, 26682110 - 26682068
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaac 330  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  26682110 ttagttgttttaacatgtgcaatattgcacatgttagacaaac 26682068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 288 - 333
Target Start/End: Original strand, 36967206 - 36967251
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||    
T  36967206 ttagttgtcttaacatgtacaatgttgcacatgttagacaaaccct 36967251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 288 - 332
Target Start/End: Original strand, 11117133 - 11117177
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 332  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||    
T  11117133 ttagttgctttaacatgtgcaatattgcacatgttagacaaaccc 11117177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 296 - 332
Target Start/End: Complemental strand, 12132017 - 12131981
Alignment:
Q  296 tttaacatgtgcaatgttgcacatgttagacaaaccc 332  Q
    |||||||||||||||||||||||||||||||||||||    
T  12132017 tttaacatgtgcaatgttgcacatgttagacaaaccc 12131981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 288 - 332
Target Start/End: Original strand, 12189724 - 12189768
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 332  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||    
T  12189724 ttagttgttttaacatgtgcaatgctgcacatgttaaacaaaccc 12189768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 288 - 332
Target Start/End: Original strand, 12434152 - 12434196
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 332  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||    
T  12434152 ttagttgttttaacatgtgcaatgctgcacatgttaaacaaaccc 12434196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 297 - 332
Target Start/End: Complemental strand, 31812146 - 31812111
Alignment:
Q  297 ttaacatgtgcaatgttgcacatgttagacaaaccc 332  Q
    ||||||||||||||||||||||||||||||||||||    
T  31812146 ttaacatgtgcaatgttgcacatgttagacaaaccc 31812111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 288 - 331
Target Start/End: Original strand, 34869658 - 34869701
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaacc 331  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||    
T  34869658 ttagttgttttaacacgtgcaatgttgcacatgtttgacaaacc 34869701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 290 - 332
Target Start/End: Complemental strand, 11923055 - 11923013
Alignment:
Q  290 agttgttttaacatgtgcaatgttgcacatgttagacaaaccc 332  Q
    |||||||||||| |||||||| |||||||||||||||||||||    
T  11923055 agttgttttaacttgtgcaatattgcacatgttagacaaaccc 11923013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 188
Target Start/End: Original strand, 40225982 - 40226024
Alignment:
Q  146 tatgagtttttctatcatgtgcaaatttgcatattttaagaag 188  Q
    ||||||||||||||||||||||||||||||| || ||||||||    
T  40225982 tatgagtttttctatcatgtgcaaatttgcacatgttaagaag 40226024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 297 - 342
Target Start/End: Complemental strand, 2161421 - 2161376
Alignment:
Q  297 ttaacatgtgcaatgttgcacatgttagacaaaccctgctaatata 342  Q
    |||||||||||||| ||||||||||||||||||||||  |||||||    
T  2161421 ttaacatgtgcaatattgcacatgttagacaaacccttttaatata 2161376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 288 - 329
Target Start/End: Original strand, 5911983 - 5912024
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaa 329  Q
    ||||||||||||| ||| ||||||||||||||||||||||||    
T  5911983 ttagttgttttaatatgagcaatgttgcacatgttagacaaa 5912024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 293 - 330
Target Start/End: Original strand, 11977281 - 11977318
Alignment:
Q  293 tgttttaacatgtgcaatgttgcacatgttagacaaac 330  Q
    |||||||||||||| |||||||||||||||||||||||    
T  11977281 tgttttaacatgtgtaatgttgcacatgttagacaaac 11977318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 296 - 333
Target Start/End: Original strand, 14816269 - 14816306
Alignment:
Q  296 tttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  14816269 tttaacatgtgcaatattgcacatgttagacaaaccct 14816306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 296 - 333
Target Start/End: Complemental strand, 14829471 - 14829434
Alignment:
Q  296 tttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  14829471 tttaacatgtgcaatattgcacatgttagacaaaccct 14829434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 292 - 329
Target Start/End: Complemental strand, 23840274 - 23840237
Alignment:
Q  292 ttgttttaacatgtgcaatgttgcacatgttagacaaa 329  Q
    |||||||||||||||| |||||||||||||||||||||    
T  23840274 ttgttttaacatgtgccatgttgcacatgttagacaaa 23840237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 288 - 329
Target Start/End: Original strand, 33430249 - 33430290
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaa 329  Q
    ||||||||||||| ||||||||||||| ||||||||||||||    
T  33430249 ttagttgttttaatatgtgcaatgttgaacatgttagacaaa 33430290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 147 - 188
Target Start/End: Original strand, 38212940 - 38212981
Alignment:
Q  147 atgagtttttctatcatgtgcaaatttgcatattttaagaag 188  Q
    |||||||||||||||||||||||||||||| || ||||||||    
T  38212940 atgagtttttctatcatgtgcaaatttgcacatgttaagaag 38212981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 333
Target Start/End: Original strand, 3306199 - 3306235
Alignment:
Q  297 ttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    |||||||||||||| ||||||||||||||||||||||    
T  3306199 ttaacatgtgcaatattgcacatgttagacaaaccct 3306235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 332
Target Start/End: Original strand, 8284705 - 8284749
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 332  Q
    ||||||| |||||||||||||||  ||||||||||||||||||||    
T  8284705 ttagttgctttaacatgtgcaatactgcacatgttagacaaaccc 8284749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 332
Target Start/End: Original strand, 13496876 - 13496912
Alignment:
Q  296 tttaacatgtgcaatgttgcacatgttagacaaaccc 332  Q
    ||||||||||||||| |||||||||||||||||||||    
T  13496876 tttaacatgtgcaatattgcacatgttagacaaaccc 13496912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 187
Target Start/End: Complemental strand, 26834739 - 26834703
Alignment:
Q  151 gtttttctatcatgtgcaaatttgcatattttaagaa 187  Q
    ||||||||||||||||||||||||||||| |||||||    
T  26834739 gtttttctatcatgtgcaaatttgcatatattaagaa 26834703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 332
Target Start/End: Complemental strand, 32186228 - 32186184
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 332  Q
    |||||||||||||||| ||||||||||| ||||||| ||||||||    
T  32186228 ttagttgttttaacatttgcaatgttgctcatgttaaacaaaccc 32186184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 332
Target Start/End: Complemental strand, 38527863 - 38527819
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 332  Q
    |||||||  |||||||||||||| |||||||||||||||||||||    
T  38527863 ttagttgccttaacatgtgcaatattgcacatgttagacaaaccc 38527819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 332
Target Start/End: Original strand, 43717688 - 43717732
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 332  Q
    ||||||| ||||||||||||||  |||||||||||||||||||||    
T  43717688 ttagttgctttaacatgtgcaacattgcacatgttagacaaaccc 43717732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 297 - 332
Target Start/End: Original strand, 7140603 - 7140638
Alignment:
Q  297 ttaacatgtgcaatgttgcacatgttagacaaaccc 332  Q
    |||||||||||||| |||||||||||||||||||||    
T  7140603 ttaacatgtgcaatattgcacatgttagacaaaccc 7140638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 297 - 332
Target Start/End: Complemental strand, 10129137 - 10129102
Alignment:
Q  297 ttaacatgtgcaatgttgcacatgttagacaaaccc 332  Q
    |||||||||||||| |||||||||||||||||||||    
T  10129137 ttaacatgtgcaatattgcacatgttagacaaaccc 10129102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 292 - 330
Target Start/End: Complemental strand, 12346044 - 12346006
Alignment:
Q  292 ttgttttaacatgtgcaatgttgcacatgttagacaaac 330  Q
    ||||||||||||||| |||||||||||||| ||||||||    
T  12346044 ttgttttaacatgtgtaatgttgcacatgtcagacaaac 12346006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 330
Target Start/End: Original strand, 35678418 - 35678452
Alignment:
Q  296 tttaacatgtgcaatgttgcacatgttagacaaac 330  Q
    ||||||||||||||| |||||||||||||||||||    
T  35678418 tttaacatgtgcaatattgcacatgttagacaaac 35678452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 330
Target Start/End: Complemental strand, 37523800 - 37523758
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaac 330  Q
    |||| |||||||||||||||||| ||| |||||||||||||||    
T  37523800 ttagctgttttaacatgtgcaatattgtacatgttagacaaac 37523758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 187
Target Start/End: Complemental strand, 2161570 - 2161529
Alignment:
Q  146 tatgagtttttctatcatgtgcaaatttgcatattttaagaa 187  Q
    |||| |||||||||||||||||||||||||| || |||||||    
T  2161570 tatgggtttttctatcatgtgcaaatttgcacatgttaagaa 2161529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 188
Target Start/End: Original strand, 7140459 - 7140496
Alignment:
Q  151 gtttttctatcatgtgcaaatttgcatattttaagaag 188  Q
    |||||||||||||||||||||||||| || ||||||||    
T  7140459 gtttttctatcatgtgcaaatttgcacatattaagaag 7140496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 188
Target Start/End: Complemental strand, 10129281 - 10129244
Alignment:
Q  151 gtttttctatcatgtgcaaatttgcatattttaagaag 188  Q
    |||||||||||||||||||||||||| || ||||||||    
T  10129281 gtttttctatcatgtgcaaatttgcacatgttaagaag 10129244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 329
Target Start/End: Original strand, 11947035 - 11947076
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaa 329  Q
    |||||||||||||| |||||||| ||| ||||||||||||||    
T  11947035 ttagttgttttaacttgtgcaatattgtacatgttagacaaa 11947076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 188
Target Start/End: Original strand, 13496709 - 13496746
Alignment:
Q  151 gtttttctatcatgtgcaaatttgcatattttaagaag 188  Q
    |||||||||||||||||||||||||| || ||||||||    
T  13496709 gtttttctatcatgtgcaaatttgcacatgttaagaag 13496746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 188
Target Start/End: Original strand, 18567416 - 18567453
Alignment:
Q  151 gtttttctatcatgtgcaaatttgcatattttaagaag 188  Q
    |||||||||||||||||||||||||| || ||||||||    
T  18567416 gtttttctatcatgtgcaaatttgcacatgttaagaag 18567453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 188
Target Start/End: Complemental strand, 22838403 - 22838366
Alignment:
Q  151 gtttttctatcatgtgcaaatttgcatattttaagaag 188  Q
    |||||||||||||||||||||||||| || ||||||||    
T  22838403 gtttttctatcatgtgcaaatttgcacatgttaagaag 22838366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 188
Target Start/End: Original strand, 27874681 - 27874718
Alignment:
Q  151 gtttttctatcatgtgcaaatttgcatattttaagaag 188  Q
    |||||||||||||||||||||||||| || ||||||||    
T  27874681 gtttttctatcatgtgcaaatttgcacatgttaagaag 27874718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 188
Target Start/End: Original strand, 28014858 - 28014895
Alignment:
Q  151 gtttttctatcatgtgcaaatttgcatattttaagaag 188  Q
    |||||||||||||||||||||||||| || ||||||||    
T  28014858 gtttttctatcatgtgcaaatttgcacatgttaagaag 28014895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 188
Target Start/End: Complemental strand, 31812291 - 31812254
Alignment:
Q  151 gtttttctatcatgtgcaaatttgcatattttaagaag 188  Q
    |||||||||||||||||||||||||| || ||||||||    
T  31812291 gtttttctatcatgtgcaaatttgcacatattaagaag 31812254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 187
Target Start/End: Original strand, 3306055 - 3306091
Alignment:
Q  151 gtttttctatcatgtgcaaatttgcatattttaagaa 187  Q
    |||||||||||||||||||||||||| || |||||||    
T  3306055 gtttttctatcatgtgcaaatttgcacatgttaagaa 3306091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 152 - 188
Target Start/End: Original strand, 13327942 - 13327978
Alignment:
Q  152 tttttctatcatgtgcaaatttgcatattttaagaag 188  Q
    ||||||||||||||||||||||||| || ||||||||    
T  13327942 tttttctatcatgtgcaaatttgcacatgttaagaag 13327978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 333
Target Start/End: Original strand, 13328085 - 13328121
Alignment:
Q  297 ttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    ||||||| |||||| ||||||||||||||||||||||    
T  13328085 ttaacatatgcaatattgcacatgttagacaaaccct 13328121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 333
Target Start/End: Original strand, 19343981 - 19344017
Alignment:
Q  297 ttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    |||||||||||||| |||||||||| |||||||||||    
T  19343981 ttaacatgtgcaatattgcacatgtaagacaaaccct 19344017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 187
Target Start/End: Complemental strand, 26682246 - 26682210
Alignment:
Q  151 gtttttctatcatgtgcaaatttgcatattttaagaa 187  Q
    |||||||||||||||||||||||||| || |||||||    
T  26682246 gtttttctatcatgtgcaaatttgcacatgttaagaa 26682210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 333
Target Start/End: Complemental strand, 26834590 - 26834558
Alignment:
Q  301 catgtgcaatgttgcacatgttagacaaaccct 333  Q
    |||||||||||||||| ||||||||||||||||    
T  26834590 catgtgcaatgttgcatatgttagacaaaccct 26834558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 152 - 188
Target Start/End: Original strand, 28866932 - 28866968
Alignment:
Q  152 tttttctatcatgtgcaaatttgcatattttaagaag 188  Q
    ||||||||||||||||||||||| |||| ||||||||    
T  28866932 tttttctatcatgtgcaaatttgtatatattaagaag 28866968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 179
Target Start/End: Complemental strand, 29642781 - 29642753
Alignment:
Q  151 gtttttctatcatgtgcaaatttgcatat 179  Q
    |||||||||||||||||||||||||||||    
T  29642781 gtttttctatcatgtgcaaatttgcatat 29642753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 333
Target Start/End: Original strand, 33514645 - 33514681
Alignment:
Q  297 ttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    |||||||||||||| ||||||||||||| ||||||||    
T  33514645 ttaacatgtgcaatattgcacatgttaggcaaaccct 33514681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 329
Target Start/End: Original strand, 39701947 - 39701979
Alignment:
Q  297 ttaacatgtgcaatgttgcacatgttagacaaa 329  Q
    |||||||||||||| ||||||||||||||||||    
T  39701947 ttaacatgtgcaatattgcacatgttagacaaa 39701979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 333
Target Start/End: Original strand, 40210965 - 40211001
Alignment:
Q  297 ttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    ||||||| |||||| ||||||||||||||||||||||    
T  40210965 ttaacatatgcaatattgcacatgttagacaaaccct 40211001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 333
Target Start/End: Complemental strand, 40716308 - 40716272
Alignment:
Q  297 ttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    |||||||||||||| |||||||||||||| |||||||    
T  40716308 ttaacatgtgcaatattgcacatgttagataaaccct 40716272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 4e-17; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 288 - 333
Target Start/End: Complemental strand, 4969815 - 4969770
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  4969815 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 4969770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 288 - 333
Target Start/End: Original strand, 29398250 - 29398295
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  29398250 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 29398295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 288 - 332
Target Start/End: Original strand, 29692676 - 29692720
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 332  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  29692676 ttagttgttttaacatgtgcaatgatgcacatgttagacaaaccc 29692720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 288 - 332
Target Start/End: Complemental strand, 45501501 - 45501457
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 332  Q
    |||||| ||||||||||||||||||||||||||||||||||||||    
T  45501501 ttagttattttaacatgtgcaatgttgcacatgttagacaaaccc 45501457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 288 - 325
Target Start/End: Complemental strand, 39475890 - 39475853
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttaga 325  Q
    ||||||||||||||||||||||||||||||||||||||    
T  39475890 ttagttgttttaacatgtgcaatgttgcacatgttaga 39475853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 288 - 329
Target Start/End: Original strand, 47457597 - 47457638
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaa 329  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  47457597 ttagttgttttaacatgtgcaatattgcacatgttagacaaa 47457638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 288 - 330
Target Start/End: Complemental strand, 19868156 - 19868114
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaac 330  Q
    |||||||| |||||||||||||| |||||||||||||||||||    
T  19868156 ttagttgtcttaacatgtgcaatattgcacatgttagacaaac 19868114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 288 - 333
Target Start/End: Complemental strand, 19889383 - 19889338
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    |||||||  |||||||||||||| ||||||||||||||||||||||    
T  19889383 ttagttgccttaacatgtgcaatattgcacatgttagacaaaccct 19889338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 328
Target Start/End: Original strand, 820673 - 820713
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaa 328  Q
    ||||||||||||||||| | |||||||||||||||||||||    
T  820673 ttagttgttttaacatgagtaatgttgcacatgttagacaa 820713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 333
Target Start/End: Complemental strand, 9331995 - 9331959
Alignment:
Q  297 ttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    |||||||||||||| ||||||||||||||||||||||    
T  9331995 ttaacatgtgcaatattgcacatgttagacaaaccct 9331959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 333
Target Start/End: Complemental strand, 24250347 - 24250311
Alignment:
Q  297 ttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    |||||||||||||| ||||||||||||||||||||||    
T  24250347 ttaacatgtgcaatattgcacatgttagacaaaccct 24250311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 333
Target Start/End: Complemental strand, 33343022 - 33342986
Alignment:
Q  297 ttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    |||||||||||||| ||||||||||||||||||||||    
T  33343022 ttaacatgtgcaatattgcacatgttagacaaaccct 33342986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 333
Target Start/End: Complemental strand, 34270299 - 34270263
Alignment:
Q  297 ttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    |||||||||||||| ||||||||||||||||||||||    
T  34270299 ttaacatgtgcaatattgcacatgttagacaaaccct 34270263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 295 - 330
Target Start/End: Original strand, 2444049 - 2444084
Alignment:
Q  295 ttttaacatgtgcaatgttgcacatgttagacaaac 330  Q
    ||||||||| ||||||||||||||||||||||||||    
T  2444049 ttttaacatatgcaatgttgcacatgttagacaaac 2444084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 149 - 188
Target Start/End: Complemental strand, 45501639 - 45501600
Alignment:
Q  149 gagtttttctatcatgtgcaaatttgcatattttaagaag 188  Q
    |||||||||||||||||||||||||||| || ||||||||    
T  45501639 gagtttttctatcatgtgcaaatttgcacatcttaagaag 45501600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 297 - 332
Target Start/End: Complemental strand, 46290044 - 46290009
Alignment:
Q  297 ttaacatgtgcaatgttgcacatgttagacaaaccc 332  Q
    |||||||||||||| |||||||||||||||||||||    
T  46290044 ttaacatgtgcaattttgcacatgttagacaaaccc 46290009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 188
Target Start/End: Original strand, 3561873 - 3561915
Alignment:
Q  146 tatgagtttttctatcatgtgcaaatttgcatattttaagaag 188  Q
    |||| |||||||||||||||||||||||||| || ||||||||    
T  3561873 tatgggtttttctatcatgtgcaaatttgcacatgttaagaag 3561915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 333
Target Start/End: Complemental strand, 24857535 - 24857497
Alignment:
Q  295 ttttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    ||||| |||||||||| ||||||||||||||||||||||    
T  24857535 ttttatcatgtgcaatattgcacatgttagacaaaccct 24857497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 188
Target Start/End: Original strand, 25709398 - 25709436
Alignment:
Q  150 agtttttctatcatgtgcaaatttgcatattttaagaag 188  Q
    ||||||||||||||||||||||||||| || ||||||||    
T  25709398 agtttttctatcatgtgcaaatttgcacatgttaagaag 25709436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 330
Target Start/End: Complemental strand, 26300615 - 26300573
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaac 330  Q
    |||||||||||||||| |||||| || ||||||||||||||||    
T  26300615 ttagttgttttaacatatgcaatattacacatgttagacaaac 26300573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 188
Target Start/End: Original strand, 39757105 - 39757147
Alignment:
Q  146 tatgagtttttctatcatgtgcaaatttgcatattttaagaag 188  Q
    |||| |||||||||||||||||||||||||| || ||||||||    
T  39757105 tatgggtttttctatcatgtgcaaatttgcacatgttaagaag 39757147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 332
Target Start/End: Original strand, 47120339 - 47120373
Alignment:
Q  298 taacatgtgcaatgttgcacatgttagacaaaccc 332  Q
    ||||||||||||| |||||||||||||||||||||    
T  47120339 taacatgtgcaatattgcacatgttagacaaaccc 47120373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 188
Target Start/End: Original strand, 820541 - 820578
Alignment:
Q  151 gtttttctatcatgtgcaaatttgcatattttaagaag 188  Q
    |||||||||||||||||||||||||| || ||||||||    
T  820541 gtttttctatcatgtgcaaatttgcacatgttaagaag 820578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 188
Target Start/End: Complemental strand, 4969951 - 4969914
Alignment:
Q  151 gtttttctatcatgtgcaaatttgcatattttaagaag 188  Q
    |||||||||||||||||||||||||| || ||||||||    
T  4969951 gtttttctatcatgtgcaaatttgcacatgttaagaag 4969914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 333
Target Start/End: Original strand, 5909417 - 5909462
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    |||||||  |||||||||||||| ||||||||||||| ||||||||    
T  5909417 ttagttgccttaacatgtgcaatattgcacatgttagtcaaaccct 5909462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 333
Target Start/End: Complemental strand, 7170045 - 7170000
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    |||||||  |||||||||||||| ||||||||||||||||| ||||    
T  7170045 ttagttgccttaacatgtgcaatattgcacatgttagacaatccct 7170000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 188
Target Start/End: Complemental strand, 9332139 - 9332102
Alignment:
Q  151 gtttttctatcatgtgcaaatttgcatattttaagaag 188  Q
    |||||||||||||||||||||||||| || ||||||||    
T  9332139 gtttttctatcatgtgcaaatttgcacatgttaagaag 9332102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 332
Target Start/End: Complemental strand, 27696746 - 27696705
Alignment:
Q  291 gttgttttaacatgtgcaatgttgcacatgttagacaaaccc 332  Q
    |||| ||||||||||||||| || ||||||||||||||||||    
T  27696746 gttgctttaacatgtgcaatattccacatgttagacaaaccc 27696705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 330
Target Start/End: Original strand, 39757254 - 39757287
Alignment:
Q  297 ttaacatgtgcaatgttgcacatgttagacaaac 330  Q
    |||||||||||||| |||||||||||||||||||    
T  39757254 ttaacatgtgcaatattgcacatgttagacaaac 39757287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 333
Target Start/End: Complemental strand, 39869157 - 39869120
Alignment:
Q  296 tttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    ||||||||||||||| ||||| ||||||||||||||||    
T  39869157 tttaacatgtgcaatattgcatatgttagacaaaccct 39869120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 329
Target Start/End: Original strand, 3562022 - 3562054
Alignment:
Q  297 ttaacatgtgcaatgttgcacatgttagacaaa 329  Q
    |||||||||||||| ||||||||||||||||||    
T  3562022 ttaacatgtgcaatattgcacatgttagacaaa 3562054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 333
Target Start/End: Complemental strand, 32117848 - 32117812
Alignment:
Q  297 ttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    |||||||||||||| |||||||||||||| |||||||    
T  32117848 ttaacatgtgcaatattgcacatgttagataaaccct 32117812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 187
Target Start/End: Complemental strand, 32117992 - 32117956
Alignment:
Q  151 gtttttctatcatgtgcaaatttgcatattttaagaa 187  Q
    |||||||||||||||||||||||||| || |||||||    
T  32117992 gtttttctatcatgtgcaaatttgcacatgttaagaa 32117956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 187
Target Start/End: Complemental strand, 33343166 - 33343130
Alignment:
Q  151 gtttttctatcatgtgcaaatttgcatattttaagaa 187  Q
    |||||||||||||||||||||||||| || |||||||    
T  33343166 gtttttctatcatgtgcaaatttgcacatgttaagaa 33343130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 187
Target Start/End: Complemental strand, 34270439 - 34270403
Alignment:
Q  151 gtttttctatcatgtgcaaatttgcatattttaagaa 187  Q
    |||||||||||||||||||||||||| || |||||||    
T  34270439 gtttttctatcatgtgcaaatttgcacatgttaagaa 34270403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 329
Target Start/End: Original strand, 36548604 - 36548636
Alignment:
Q  297 ttaacatgtgcaatgttgcacatgttagacaaa 329  Q
    |||||||||||||| ||||||||||||||||||    
T  36548604 ttaacatgtgcaatattgcacatgttagacaaa 36548636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 187
Target Start/End: Complemental strand, 46290188 - 46290152
Alignment:
Q  151 gtttttctatcatgtgcaaatttgcatattttaagaa 187  Q
    |||||||||||||||||||||||||| || |||||||    
T  46290188 gtttttctatcatgtgcaaatttgcacatgttaagaa 46290152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 4e-17; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 288 - 333
Target Start/End: Original strand, 24979285 - 24979330
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  24979285 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 24979330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 288 - 332
Target Start/End: Complemental strand, 34692396 - 34692352
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 332  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  34692396 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 34692352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 288 - 333
Target Start/End: Complemental strand, 30623368 - 30623323
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||    
T  30623368 ttagttgttttaacatgtgtaatgttgcacatgttagacaaaccct 30623323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 297 - 333
Target Start/End: Original strand, 18332833 - 18332869
Alignment:
Q  297 ttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    |||||||||||||||||||||||||||||||||||||    
T  18332833 ttaacatgtgcaatgttgcacatgttagacaaaccct 18332869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 288 - 331
Target Start/End: Original strand, 1814917 - 1814960
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaacc 331  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||    
T  1814917 ttagttgctttaacatgtgcaatattgcacatgttagacaaacc 1814960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 288 - 329
Target Start/End: Complemental strand, 4371881 - 4371840
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaa 329  Q
    |||||||||||||||||| ||||||||||||| |||||||||    
T  4371881 ttagttgttttaacatgtacaatgttgcacatattagacaaa 4371840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 288 - 333
Target Start/End: Complemental strand, 6016898 - 6016853
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    |||| ||| ||| |||||||||||||||||||||||||||||||||    
T  6016898 ttagatgtcttaccatgtgcaatgttgcacatgttagacaaaccct 6016853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 288 - 333
Target Start/End: Complemental strand, 17596355 - 17596310
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    |||||||| |||||||||||||| ||||||||||||||||| ||||    
T  17596355 ttagttgtcttaacatgtgcaatattgcacatgttagacaatccct 17596310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 296 - 333
Target Start/End: Original strand, 29863446 - 29863483
Alignment:
Q  296 tttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  29863446 tttaacatgtgcaatattgcacatgttagacaaaccct 29863483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 296 - 333
Target Start/End: Original strand, 31791060 - 31791097
Alignment:
Q  296 tttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  31791060 tttaacatgtgcaatattgcacatgttagacaaaccct 31791097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 333
Target Start/End: Original strand, 14228270 - 14228306
Alignment:
Q  297 ttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    |||||||||||||| ||||||||||||||||||||||    
T  14228270 ttaacatgtgcaatattgcacatgttagacaaaccct 14228306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 333
Target Start/End: Original strand, 17552731 - 17552767
Alignment:
Q  297 ttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    |||||||||||||| ||||||||||||||||||||||    
T  17552731 ttaacatgtgcaatattgcacatgttagacaaaccct 17552767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 333
Target Start/End: Complemental strand, 33017758 - 33017722
Alignment:
Q  297 ttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    |||||||||||||| ||||||||||||||||||||||    
T  33017758 ttaacatgtgcaatattgcacatgttagacaaaccct 33017722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 297 - 332
Target Start/End: Original strand, 8977611 - 8977646
Alignment:
Q  297 ttaacatgtgcaatgttgcacatgttagacaaaccc 332  Q
    |||||||||||||| |||||||||||||||||||||    
T  8977611 ttaacatgtgcaatattgcacatgttagacaaaccc 8977646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 297 - 328
Target Start/End: Complemental strand, 10887062 - 10887031
Alignment:
Q  297 ttaacatgtgcaatgttgcacatgttagacaa 328  Q
    ||||||||||||||||||||||||||||||||    
T  10887062 ttaacatgtgcaatgttgcacatgttagacaa 10887031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 149 - 188
Target Start/End: Complemental strand, 10887209 - 10887170
Alignment:
Q  149 gagtttttctatcatgtgcaaatttgcatattttaagaag 188  Q
    |||||||||||||||||||||||||||| || ||||||||    
T  10887209 gagtttttctatcatgtgcaaatttgcacatgttaagaag 10887170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 297 - 332
Target Start/End: Original strand, 28943913 - 28943948
Alignment:
Q  297 ttaacatgtgcaatgttgcacatgttagacaaaccc 332  Q
    |||||||||||||| |||||||||||||||||||||    
T  28943913 ttaacatgtgcaatattgcacatgttagacaaaccc 28943948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 331
Target Start/End: Original strand, 5363037 - 5363071
Alignment:
Q  297 ttaacatgtgcaatgttgcacatgttagacaaacc 331  Q
    |||||||||||||| ||||||||||||||||||||    
T  5363037 ttaacatgtgcaatattgcacatgttagacaaacc 5363071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 188
Target Start/End: Complemental strand, 34692537 - 34692495
Alignment:
Q  146 tatgagtttttctatcatgtgcaaatttgcatattttaagaag 188  Q
    |||| |||||||||||||||||||||||||| || ||||||||    
T  34692537 tatgggtttttctatcatgtgcaaatttgcacatgttaagaag 34692495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 331
Target Start/End: Original strand, 2086999 - 2087032
Alignment:
Q  298 taacatgtgcaatgttgcacatgttagacaaacc 331  Q
    ||||||||||||| ||||||||||||||||||||    
T  2086999 taacatgtgcaatattgcacatgttagacaaacc 2087032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 188
Target Start/End: Original strand, 29863302 - 29863339
Alignment:
Q  151 gtttttctatcatgtgcaaatttgcatattttaagaag 188  Q
    |||||||||||||||||||||||||| || ||||||||    
T  29863302 gtttttctatcatgtgcaaatttgcacatgttaagaag 29863339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 187
Target Start/End: Complemental strand, 3853121 - 3853085
Alignment:
Q  151 gtttttctatcatgtgcaaatttgcatattttaagaa 187  Q
    |||||||||||||||||||||||||| || |||||||    
T  3853121 gtttttctatcatgtgcaaatttgcacatgttaagaa 3853085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 332
Target Start/End: Original strand, 10345683 - 10345719
Alignment:
Q  296 tttaacatgtgcaatgttgcacatgttagacaaaccc 332  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  10345683 tttaacatgtgcaatattgcacatgttagacagaccc 10345719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 332
Target Start/End: Complemental strand, 12220584 - 12220548
Alignment:
Q  296 tttaacatgtgcaatgttgcacatgttagacaaaccc 332  Q
    ||||||||||||||||||||| ||| |||||||||||    
T  12220584 tttaacatgtgcaatgttgcaaatgctagacaaaccc 12220548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 187
Target Start/End: Original strand, 14228126 - 14228162
Alignment:
Q  151 gtttttctatcatgtgcaaatttgcatattttaagaa 187  Q
    |||||||||||||||||||||||||| || |||||||    
T  14228126 gtttttctatcatgtgcaaatttgcacatgttaagaa 14228162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 187
Target Start/End: Original strand, 17552587 - 17552623
Alignment:
Q  151 gtttttctatcatgtgcaaatttgcatattttaagaa 187  Q
    |||||||||||||||||||||||||| || |||||||    
T  17552587 gtttttctatcatgtgcaaatttgcacatgttaagaa 17552623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 333
Target Start/End: Original strand, 26602575 - 26602611
Alignment:
Q  297 ttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    |||| ||||||||| ||||||||||||||||||||||    
T  26602575 ttaatatgtgcaatattgcacatgttagacaaaccct 26602611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 187
Target Start/End: Original strand, 28943769 - 28943805
Alignment:
Q  151 gtttttctatcatgtgcaaatttgcatattttaagaa 187  Q
    |||||||||||||||||||||||||| || |||||||    
T  28943769 gtttttctatcatgtgcaaatttgcacatgttaagaa 28943805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 333
Target Start/End: Complemental strand, 31568146 - 31568110
Alignment:
Q  297 ttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    |||||||||||||| |||||| |||||||||||||||    
T  31568146 ttaacatgtgcaatattgcacgtgttagacaaaccct 31568110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 4e-17; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 288 - 333
Target Start/End: Complemental strand, 45742410 - 45742365
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  45742410 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 45742365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 288 - 332
Target Start/End: Complemental strand, 17409866 - 17409822
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 332  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  17409866 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 17409822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 288 - 332
Target Start/End: Complemental strand, 23545518 - 23545474
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 332  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  23545518 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 23545474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 288 - 331
Target Start/End: Complemental strand, 19468236 - 19468193
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaacc 331  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  19468236 ttagttgttttaacatgtgcaatgttgcacatgttagacaaacc 19468193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 288 - 333
Target Start/End: Original strand, 19451036 - 19451081
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  19451036 ttagttgttttaacatgtgcaatgttgcacatgttagacaacccct 19451081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 288 - 333
Target Start/End: Complemental strand, 27019302 - 27019257
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||    
T  27019302 ttagttgttttaacatgtgcaatgttgcacacgttagacaaaccct 27019257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 292 - 332
Target Start/End: Complemental strand, 3085390 - 3085350
Alignment:
Q  292 ttgttttaacatgtgcaatgttgcacatgttagacaaaccc 332  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  3085390 ttgttttaacatgtgcaatgttgcacatgttagacaaaccc 3085350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 288 - 333
Target Start/End: Original strand, 8736946 - 8736991
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||    
T  8736946 ttagatgtcttaacatgtgcaatgttgcacatgttagacaaaccct 8736991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 288 - 333
Target Start/End: Original strand, 16667520 - 16667565
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||    
T  16667520 ttagatgtcttaacatgtgcaatgttgcacatgttagacaaaccct 16667565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 288 - 329
Target Start/End: Original strand, 19838825 - 19838866
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaa 329  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  19838825 ttagttgttttaacatgtgcaatgttccacatgttagacaaa 19838866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 297 - 333
Target Start/End: Original strand, 54495782 - 54495818
Alignment:
Q  297 ttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    |||||||||||||||||||||||||||||||||||||    
T  54495782 ttaacatgtgcaatgttgcacatgttagacaaaccct 54495818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 188
Target Start/End: Original strand, 4779431 - 4779473
Alignment:
Q  146 tatgagtttttctatcatgtgcaaatttgcatattttaagaag 188  Q
    ||||||||||||||||||||||||||||||| || ||||||||    
T  4779431 tatgagtttttctatcatgtgcaaatttgcacatgttaagaag 4779473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 288 - 330
Target Start/End: Complemental strand, 6875543 - 6875501
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaac 330  Q
    ||||||||||||||||||||||| ||||| |||||||||||||    
T  6875543 ttagttgttttaacatgtgcaatattgcaaatgttagacaaac 6875501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 292 - 330
Target Start/End: Original strand, 24243029 - 24243067
Alignment:
Q  292 ttgttttaacatgtgcaatgttgcacatgttagacaaac 330  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  24243029 ttgttttaacatgtgtaatgttgcacatgttagacaaac 24243067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 188
Target Start/End: Original strand, 47326887 - 47326929
Alignment:
Q  146 tatgagtttttctatcatgtgcaaatttgcatattttaagaag 188  Q
    ||||||||||||||||||||||||||||||| || ||||||||    
T  47326887 tatgagtttttctatcatgtgcaaatttgcacatgttaagaag 47326929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 188
Target Start/End: Original strand, 47341683 - 47341725
Alignment:
Q  146 tatgagtttttctatcatgtgcaaatttgcatattttaagaag 188  Q
    ||||||||||||||||||||||||||||||| || ||||||||    
T  47341683 tatgagtttttctatcatgtgcaaatttgcacatgttaagaag 47341725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 151 - 188
Target Start/End: Complemental strand, 3085848 - 3085811
Alignment:
Q  151 gtttttctatcatgtgcaaatttgcatattttaagaag 188  Q
    |||||||||||||||||||||||||| |||||||||||    
T  3085848 gtttttctatcatgtgcaaatttgcacattttaagaag 3085811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 288 - 333
Target Start/End: Original strand, 9971700 - 9971745
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    ||||||| | ||||||||||||| ||||||||||||||||||||||    
T  9971700 ttagttgctgtaacatgtgcaatattgcacatgttagacaaaccct 9971745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 292 - 333
Target Start/End: Original strand, 31955898 - 31955939
Alignment:
Q  292 ttgttttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    |||||||||||||| |||||||| ||||||||||||||||||    
T  31955898 ttgttttaacatgttcaatgttggacatgttagacaaaccct 31955939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 288 - 333
Target Start/End: Original strand, 47327028 - 47327073
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    |||| ||| |||||||||||||||||||||| ||||||||||||||    
T  47327028 ttagatgtcttaacatgtgcaatgttgcacaggttagacaaaccct 47327073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 288 - 333
Target Start/End: Original strand, 47341824 - 47341869
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    |||| ||| |||||||||||||||||||||| ||||||||||||||    
T  47341824 ttagatgtcttaacatgtgcaatgttgcacaggttagacaaaccct 47341869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 288 - 329
Target Start/End: Complemental strand, 51691384 - 51691343
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaa 329  Q
    ||||||| |||||||||||||||||||||||| |||||||||    
T  51691384 ttagttgctttaacatgtgcaatgttgcacattttagacaaa 51691343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 332
Target Start/End: Complemental strand, 2096913 - 2096869
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 332  Q
    ||||||| |||||| |||||||| |||||||||||||||||||||    
T  2096913 ttagttgatttaacttgtgcaatattgcacatgttagacaaaccc 2096869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 332
Target Start/End: Complemental strand, 24684878 - 24684834
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 332  Q
    ||||||||||||||||||| ||||||||| |||||| ||||||||    
T  24684878 ttagttgttttaacatgtgtaatgttgcaaatgttaaacaaaccc 24684834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 332
Target Start/End: Complemental strand, 40049593 - 40049557
Alignment:
Q  296 tttaacatgtgcaatgttgcacatgttagacaaaccc 332  Q
    ||||||||||||||| |||||||||||||||||||||    
T  40049593 tttaacatgtgcaatattgcacatgttagacaaaccc 40049557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 332
Target Start/End: Original strand, 48910970 - 48911014
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 332  Q
    |||||| | |||||||||||||| |||||||||||||||||||||    
T  48910970 ttagttatcttaacatgtgcaatattgcacatgttagacaaaccc 48911014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 333
Target Start/End: Complemental strand, 50352336 - 50352300
Alignment:
Q  297 ttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    |||||||||||||| ||||||||||||||||||||||    
T  50352336 ttaacatgtgcaatattgcacatgttagacaaaccct 50352300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 291 - 333
Target Start/End: Complemental strand, 3726976 - 3726934
Alignment:
Q  291 gttgttttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    ||||| |||||||||||||| |||||||||| |||||||||||    
T  3726976 gttgtgttaacatgtgcaatattgcacatgtaagacaaaccct 3726934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 331
Target Start/End: Original strand, 9759286 - 9759320
Alignment:
Q  297 ttaacatgtgcaatgttgcacatgttagacaaacc 331  Q
    |||||||||||||| ||||||||||||||||||||    
T  9759286 ttaacatgtgcaatattgcacatgttagacaaacc 9759320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 329
Target Start/End: Original strand, 16069348 - 16069382
Alignment:
Q  295 ttttaacatgtgcaatgttgcacatgttagacaaa 329  Q
    ||||||| |||||||||||||||||||||||||||    
T  16069348 ttttaacgtgtgcaatgttgcacatgttagacaaa 16069382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 188
Target Start/End: Original strand, 35999942 - 35999984
Alignment:
Q  146 tatgagtttttctatcatgtgcaaatttgcatattttaagaag 188  Q
    |||| |||||||||||||||||||||||||| || ||||||||    
T  35999942 tatgggtttttctatcatgtgcaaatttgcacatgttaagaag 35999984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 176
Target Start/End: Complemental strand, 46803982 - 46803952
Alignment:
Q  146 tatgagtttttctatcatgtgcaaatttgca 176  Q
    |||||||||||||||||||||||||||||||    
T  46803982 tatgagtttttctatcatgtgcaaatttgca 46803952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 184
Target Start/End: Complemental strand, 4329772 - 4329739
Alignment:
Q  151 gtttttctatcatgtgcaaatttgcatattttaa 184  Q
    ||||||||||||||||||||||||||||| ||||    
T  4329772 gtttttctatcatgtgcaaatttgcatatgttaa 4329739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 333
Target Start/End: Complemental strand, 7349731 - 7349686
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    |||||||  |||||||||||||| |||||| |||||||||||||||    
T  7349731 ttagttgccttaacatgtgcaatattgcacgtgttagacaaaccct 7349686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 188
Target Start/End: Original strand, 18882267 - 18882304
Alignment:
Q  151 gtttttctatcatgtgcaaatttgcatattttaagaag 188  Q
    |||||||||||||||||||||||||| || ||||||||    
T  18882267 gtttttctatcatgtgcaaatttgcacatgttaagaag 18882304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 184
Target Start/End: Complemental strand, 27019438 - 27019405
Alignment:
Q  151 gtttttctatcatgtgcaaatttgcatattttaa 184  Q
    ||||||||||||||||||||||||||||| ||||    
T  27019438 gtttttctatcatgtgcaaatttgcatatgttaa 27019405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 188
Target Start/End: Complemental strand, 27362569 - 27362532
Alignment:
Q  151 gtttttctatcatgtgcaaatttgcatattttaagaag 188  Q
    |||||||||||||||||||||||||| || ||||||||    
T  27362569 gtttttctatcatgtgcaaatttgcacatgttaagaag 27362532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 188
Target Start/End: Original strand, 29190816 - 29190853
Alignment:
Q  151 gtttttctatcatgtgcaaatttgcatattttaagaag 188  Q
    |||||||||||||||||||||||||| || ||||||||    
T  29190816 gtttttctatcatgtgcaaatttgcacatgttaagaag 29190853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 329
Target Start/End: Original strand, 33632338 - 33632379
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaa 329  Q
    ||||||||||| ||||||  ||||||||||||||||||||||    
T  33632338 ttagttgtttttacatgtataatgttgcacatgttagacaaa 33632379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 329
Target Start/End: Original strand, 53376549 - 53376590
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaa 329  Q
    |||||| |||||||||||||||| |||||||| |||||||||    
T  53376549 ttagttcttttaacatgtgcaatattgcacatcttagacaaa 53376590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 188
Target Start/End: Original strand, 54495637 - 54495674
Alignment:
Q  151 gtttttctatcatgtgcaaatttgcatattttaagaag 188  Q
    |||||||||||||||||||||||||| || ||||||||    
T  54495637 gtttttctatcatgtgcaaatttgcacatgttaagaag 54495674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 152 - 188
Target Start/End: Original strand, 16667385 - 16667421
Alignment:
Q  152 tttttctatcatgtgcaaatttgcatattttaagaag 188  Q
    ||||||||||||||||||||||||| || ||||||||    
T  16667385 tttttctatcatgtgcaaatttgcacatgttaagaag 16667421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 329
Target Start/End: Complemental strand, 23553603 - 23553571
Alignment:
Q  297 ttaacatgtgcaatgttgcacatgttagacaaa 329  Q
    |||||||||||||| ||||||||||||||||||    
T  23553603 ttaacatgtgcaatattgcacatgttagacaaa 23553571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 152 - 188
Target Start/End: Original strand, 48910803 - 48910839
Alignment:
Q  152 tttttctatcatgtgcaaatttgcatattttaagaag 188  Q
    |||||||||||| ||||||||||||||| ||||||||    
T  48910803 tttttctatcatatgcaaatttgcatatgttaagaag 48910839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 333
Target Start/End: Complemental strand, 49228390 - 49228354
Alignment:
Q  297 ttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    ||||||| |||||| ||||||||||||||||||||||    
T  49228390 ttaacatatgcaatattgcacatgttagacaaaccct 49228354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 333
Target Start/End: Complemental strand, 49332366 - 49332330
Alignment:
Q  297 ttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    |||||||||| ||| ||||||||||||||||||||||    
T  49332366 ttaacatgtgaaatattgcacatgttagacaaaccct 49332330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 4e-17; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 288 - 333
Target Start/End: Complemental strand, 50204445 - 50204400
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  50204445 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 50204400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 288 - 332
Target Start/End: Complemental strand, 42180094 - 42180050
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 332  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  42180094 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 42180050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 288 - 330
Target Start/End: Original strand, 54527842 - 54527884
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaac 330  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  54527842 ttagttgttttaacatgtgcaatgttgcacatgttagacaaac 54527884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 288 - 333
Target Start/End: Complemental strand, 8165688 - 8165643
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  8165688 ttagttgttttaaaatgtgcaatgttgcacatgttagacaaaccct 8165643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 282 - 331
Target Start/End: Complemental strand, 24087032 - 24086983
Alignment:
Q  282 ctacggttagttgttttaacatgtgcaatgttgcacatgttagacaaacc 331  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  24087032 ctactgttagttgttttaagatgtgcaatgttgcacatgttagacaaacc 24086983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 288 - 333
Target Start/End: Original strand, 51567954 - 51567999
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    |||||||||||||||||||||||||||| |||||||||||||||||    
T  51567954 ttagttgttttaacatgtgcaatgttgcgcatgttagacaaaccct 51567999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 288 - 332
Target Start/End: Complemental strand, 51618092 - 51618048
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 332  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  51618092 ttagttgttttaacatgtgcaatattgcacatgttagacaaaccc 51618048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 288 - 331
Target Start/End: Complemental strand, 27549580 - 27549537
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaacc 331  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  27549580 ttagttgttttaacatgtgcaatgttgcacatattagacaaacc 27549537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 295 - 333
Target Start/End: Complemental strand, 51400203 - 51400165
Alignment:
Q  295 ttttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    |||||||||||||||||||||||||||||||||||||||    
T  51400203 ttttaacatgtgcaatgttgcacatgttagacaaaccct 51400165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 288 - 323
Target Start/End: Original strand, 8497559 - 8497594
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgtta 323  Q
    ||||||||||||||||||||||||||||||||||||    
T  8497559 ttagttgttttaacatgtgcaatgttgcacatgtta 8497594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 297 - 332
Target Start/End: Complemental strand, 38389480 - 38389445
Alignment:
Q  297 ttaacatgtgcaatgttgcacatgttagacaaaccc 332  Q
    ||||||||||||||||||||||||||||||||||||    
T  38389480 ttaacatgtgcaatgttgcacatgttagacaaaccc 38389445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 291 - 333
Target Start/End: Complemental strand, 26499609 - 26499567
Alignment:
Q  291 gttgttttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    ||||||||||||| ||||||||||||||||||||| |||||||    
T  26499609 gttgttttaacatatgcaatgttgcacatgttagataaaccct 26499567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 188
Target Start/End: Original strand, 33474468 - 33474510
Alignment:
Q  146 tatgagtttttctatcatgtgcaaatttgcatattttaagaag 188  Q
    ||||||||||||||||||||||||||||||| || ||||||||    
T  33474468 tatgagtttttctatcatgtgcaaatttgcacatgttaagaag 33474510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 288 - 333
Target Start/End: Complemental strand, 11610957 - 11610912
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    |||||||  |||||||||||||| ||||||||||||||||||||||    
T  11610957 ttagttgccttaacatgtgcaatattgcacatgttagacaaaccct 11610912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 292 - 333
Target Start/End: Complemental strand, 40930095 - 40930054
Alignment:
Q  292 ttgttttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    ||||||||||||||||||| |||| |||||||||||||||||    
T  40930095 ttgttttaacatgtgcaattttgcgcatgttagacaaaccct 40930054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 333
Target Start/End: Complemental strand, 3863363 - 3863327
Alignment:
Q  297 ttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    |||||||||||||| ||||||||||||||||||||||    
T  3863363 ttaacatgtgcaatattgcacatgttagacaaaccct 3863327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 297 - 332
Target Start/End: Complemental strand, 2571302 - 2571267
Alignment:
Q  297 ttaacatgtgcaatgttgcacatgttagacaaaccc 332  Q
    |||||||||||||| |||||||||||||||||||||    
T  2571302 ttaacatgtgcaatattgcacatgttagacaaaccc 2571267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 297 - 332
Target Start/End: Original strand, 12515618 - 12515653
Alignment:
Q  297 ttaacatgtgcaatgttgcacatgttagacaaaccc 332  Q
    |||||||||||||| |||||||||||||||||||||    
T  12515618 ttaacatgtgcaatattgcacatgttagacaaaccc 12515653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 291 - 330
Target Start/End: Original strand, 15664992 - 15665031
Alignment:
Q  291 gttgttttaacatgtgcaatgttgcacatgttagacaaac 330  Q
    |||||||||||| |||| ||||||||||||||||||||||    
T  15664992 gttgttttaacacgtgctatgttgcacatgttagacaaac 15665031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 331
Target Start/End: Original strand, 39365275 - 39365310
Alignment:
Q  296 tttaacatgtgcaatgttgcacatgttagacaaacc 331  Q
    ||||||||||||||| ||||||||||||||||||||    
T  39365275 tttaacatgtgcaatattgcacatgttagacaaacc 39365310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 330
Target Start/End: Original strand, 35415157 - 35415199
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaac 330  Q
    |||||||||||||||||||||||  ||||||||||||| ||||    
T  35415157 ttagttgttttaacatgtgcaataatgcacatgttagataaac 35415199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 333
Target Start/End: Original strand, 36426554 - 36426592
Alignment:
Q  295 ttttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    |||||||||||||||||||||||||| |||| |||||||    
T  36426554 ttttaacatgtgcaatgttgcacatgatagaaaaaccct 36426592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 188
Target Start/End: Complemental strand, 40930230 - 40930192
Alignment:
Q  150 agtttttctatcatgtgcaaatttgcatattttaagaag 188  Q
    ||||||||||||||||||||||||||| || ||||||||    
T  40930230 agtttttctatcatgtgcaaatttgcacatgttaagaag 40930192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 321
Target Start/End: Original strand, 2379205 - 2379238
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgt 321  Q
    ||||||||||||||||||||||| ||||||||||    
T  2379205 ttagttgttttaacatgtgcaatattgcacatgt 2379238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 188
Target Start/End: Complemental strand, 3863507 - 3863470
Alignment:
Q  151 gtttttctatcatgtgcaaatttgcatattttaagaag 188  Q
    |||||||||||||||||||||||||| || ||||||||    
T  3863507 gtttttctatcatgtgcaaatttgcacatgttaagaag 3863470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 330
Target Start/End: Complemental strand, 20938090 - 20938057
Alignment:
Q  297 ttaacatgtgcaatgttgcacatgttagacaaac 330  Q
    |||||||||||||| |||||||||||||||||||    
T  20938090 ttaacatgtgcaatattgcacatgttagacaaac 20938057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 176
Target Start/End: Complemental strand, 20938239 - 20938210
Alignment:
Q  147 atgagtttttctatcatgtgcaaatttgca 176  Q
    ||||||||||||||||||||||||||||||    
T  20938239 atgagtttttctatcatgtgcaaatttgca 20938210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 188
Target Start/End: Complemental strand, 23523124 - 23523087
Alignment:
Q  151 gtttttctatcatgtgcaaatttgcatattttaagaag 188  Q
    |||||||||||||||||||||||||| || ||||||||    
T  23523124 gtttttctatcatgtgcaaatttgcacatgttaagaag 23523087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 333
Target Start/End: Complemental strand, 37444189 - 37444144
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    |||||||  |||||||||||||| ||||||||||||||||| ||||    
T  37444189 ttagttgccttaacatgtgcaatattgcacatgttagacaatccct 37444144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 188
Target Start/End: Complemental strand, 38389625 - 38389588
Alignment:
Q  151 gtttttctatcatgtgcaaatttgcatattttaagaag 188  Q
    |||||||||||||||||||||||||| || ||||||||    
T  38389625 gtttttctatcatgtgcaaatttgcacatgttaagaag 38389588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 333
Target Start/End: Complemental strand, 47386964 - 47386919
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    ||||||| ||||| ||| ||||| ||||||||||||||||||||||    
T  47386964 ttagttgctttaatatgcgcaatattgcacatgttagacaaaccct 47386919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 188
Target Start/End: Complemental strand, 50204581 - 50204544
Alignment:
Q  151 gtttttctatcatgtgcaaatttgcatattttaagaag 188  Q
    |||||||||||||||||||||||||| || ||||||||    
T  50204581 gtttttctatcatgtgcaaatttgcacatgttaagaag 50204544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 188
Target Start/End: Complemental strand, 51618225 - 51618188
Alignment:
Q  151 gtttttctatcatgtgcaaatttgcatattttaagaag 188  Q
    |||||||||||||||||||||||||| || ||||||||    
T  51618225 gtttttctatcatgtgcaaatttgcacatgttaagaag 51618188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 187
Target Start/End: Complemental strand, 2571446 - 2571410
Alignment:
Q  151 gtttttctatcatgtgcaaatttgcatattttaagaa 187  Q
    |||||||||||||||||||||||||| || |||||||    
T  2571446 gtttttctatcatgtgcaaatttgcacatgttaagaa 2571410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 152 - 188
Target Start/End: Complemental strand, 8165823 - 8165787
Alignment:
Q  152 tttttctatcatgtgcaaatttgcatattttaagaag 188  Q
    ||||||||||||||||||||||||| || ||||||||    
T  8165823 tttttctatcatgtgcaaatttgcacatgttaagaag 8165787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 187
Target Start/End: Complemental strand, 10307944 - 10307908
Alignment:
Q  151 gtttttctatcatgtgcaaatttgcatattttaagaa 187  Q
    |||||||||||||||||||||||||| || |||||||    
T  10307944 gtttttctatcatgtgcaaatttgcacatgttaagaa 10307908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 333
Target Start/End: Complemental strand, 13495327 - 13495291
Alignment:
Q  297 ttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    |||||||||||||  ||||||||||||||||||||||    
T  13495327 ttaacatgtgcaaatttgcacatgttagacaaaccct 13495291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 333
Target Start/End: Original strand, 28992917 - 28992960
Alignment:
Q  292 ttgttttaacatgtgcaatgt--tgcacatgttagacaaaccct 333  Q
    ||||||||||||||||||| |  |||||||||||||||||||||    
T  28992917 ttgttttaacatgtgcaatatattgcacatgttagacaaaccct 28992960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 148 - 188
Target Start/End: Original strand, 35414806 - 35414846
Alignment:
Q  148 tgagtttttctatcatgtgcaaatttgcatattttaagaag 188  Q
    |||||||||||||||||||||||||| || || ||||||||    
T  35414806 tgagtttttctatcatgtgcaaatttacacatgttaagaag 35414846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 332
Target Start/End: Original strand, 46845576 - 46845620
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 332  Q
    ||||||| ||||| ||||||||| |||||||| ||||||||||||    
T  46845576 ttagttgctttaagatgtgcaatattgcacatattagacaaaccc 46845620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 329
Target Start/End: Original strand, 51339328 - 51339360
Alignment:
Q  297 ttaacatgtgcaatgttgcacatgttagacaaa 329  Q
    |||||||||||||| ||||||||||||||||||    
T  51339328 ttaacatgtgcaatattgcacatgttagacaaa 51339360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 152 - 184
Target Start/End: Original strand, 54016169 - 54016201
Alignment:
Q  152 tttttctatcatgtgcaaatttgcatattttaa 184  Q
    ||||||||||||||||||||||||| |||||||    
T  54016169 tttttctatcatgtgcaaatttgcacattttaa 54016201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 4e-17; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 288 - 333
Target Start/End: Original strand, 3168204 - 3168249
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  3168204 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 3168249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 288 - 332
Target Start/End: Complemental strand, 6180228 - 6180184
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 332  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  6180228 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 6180184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 288 - 332
Target Start/End: Original strand, 7824994 - 7825038
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 332  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  7824994 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 7825038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 288 - 333
Target Start/End: Complemental strand, 13321918 - 13321873
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  13321918 ttagttgttttaacatgtacaatgttgcacatgttagacaaaccct 13321873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 288 - 333
Target Start/End: Complemental strand, 23591740 - 23591695
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||    
T  23591740 ttagttgctttaacatgtgcaatgttgcacatgttagacaaaccct 23591695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 288 - 332
Target Start/End: Complemental strand, 22167377 - 22167333
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 332  Q
    ||||||||||||||||||||||||||||||||| |||||||||||    
T  22167377 ttagttgttttaacatgtgcaatgttgcacatggtagacaaaccc 22167333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 288 - 332
Target Start/End: Complemental strand, 35512767 - 35512723
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 332  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  35512767 ttagttgttttaacatttgcaatgttgcacatgttagacaaaccc 35512723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 295 - 332
Target Start/End: Complemental strand, 22331658 - 22331621
Alignment:
Q  295 ttttaacatgtgcaatgttgcacatgttagacaaaccc 332  Q
    ||||||||||||||||||||||||||||||||||||||    
T  22331658 ttttaacatgtgcaatgttgcacatgttagacaaaccc 22331621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 288 - 329
Target Start/End: Complemental strand, 25186881 - 25186840
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaa 329  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  25186881 ttagttgttttaacatgtgcaatgttgcacatattagacaaa 25186840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 288 - 333
Target Start/End: Complemental strand, 38812782 - 38812737
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||    
T  38812782 ttagttgttttaacatgtacaatgttgcacatgttaaacaaaccct 38812737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 288 - 332
Target Start/End: Complemental strand, 30171921 - 30171877
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 332  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||    
T  30171921 ttagatgtcttaacatgtgcaatgttgcacatgttagacaaaccc 30171877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 288 - 332
Target Start/End: Complemental strand, 30187462 - 30187418
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 332  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||    
T  30187462 ttagatgtcttaacatgtgcaatgttgcacatgttagacaaaccc 30187418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 297 - 333
Target Start/End: Complemental strand, 34802001 - 34801965
Alignment:
Q  297 ttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    |||||||||||||||||||||||||||||||||||||    
T  34802001 ttaacatgtgcaatgttgcacatgttagacaaaccct 34801965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 290 - 332
Target Start/End: Complemental strand, 23808475 - 23808433
Alignment:
Q  290 agttgttttaacatgtgcaatgttgcacatgttagacaaaccc 332  Q
    |||| |||||||||||||||||||| |||||||||||||||||    
T  23808475 agttattttaacatgtgcaatgttgtacatgttagacaaaccc 23808433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 333
Target Start/End: Complemental strand, 25532252 - 25532206
Alignment:
Q  287 gttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    ||||||| ||||||||||||| |||||| ||||||||||||||||||    
T  25532252 gttagttattttaacatgtgcgatgttgaacatgttagacaaaccct 25532206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 151 - 188
Target Start/End: Complemental strand, 13322054 - 13322017
Alignment:
Q  151 gtttttctatcatgtgcaaatttgcatattttaagaag 188  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  13322054 gtttttctatcatgtgcaaatttgcatatgttaagaag 13322017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 291 - 332
Target Start/End: Original strand, 34050422 - 34050463
Alignment:
Q  291 gttgttttaacatgtgcaatgttgcacatgttagacaaaccc 332  Q
    |||| ||||||||||||||| |||||||||||||||||||||    
T  34050422 gttgctttaacatgtgcaatattgcacatgttagacaaaccc 34050463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 288 - 333
Target Start/End: Original strand, 39150462 - 39150507
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    |||||||  |||||||||||||| ||||||||||||||||||||||    
T  39150462 ttagttgccttaacatgtgcaatattgcacatgttagacaaaccct 39150507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 333
Target Start/End: Original strand, 1502864 - 1502900
Alignment:
Q  297 ttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    |||||||||||||| ||||||||||||||||||||||    
T  1502864 ttaacatgtgcaatattgcacatgttagacaaaccct 1502900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 187
Target Start/End: Complemental strand, 23591880 - 23591840
Alignment:
Q  147 atgagtttttctatcatgtgcaaatttgcatattttaagaa 187  Q
    |||||||||||||||||||||||||||||| || |||||||    
T  23591880 atgagtttttctatcatgtgcaaatttgcacatgttaagaa 23591840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 328
Target Start/End: Complemental strand, 41624872 - 41624832
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaa 328  Q
    ||||||| ||||||||||||||| |||||||||||||||||    
T  41624872 ttagttgctttaacatgtgcaatattgcacatgttagacaa 41624832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 333
Target Start/End: Complemental strand, 51382405 - 51382369
Alignment:
Q  297 ttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    |||||||||||||| ||||||||||||||||||||||    
T  51382405 ttaacatgtgcaatattgcacatgttagacaaaccct 51382369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 297 - 332
Target Start/End: Complemental strand, 313783 - 313748
Alignment:
Q  297 ttaacatgtgcaatgttgcacatgttagacaaaccc 332  Q
    |||||||||||||| |||||||||||||||||||||    
T  313783 ttaacatgtgcaatattgcacatgttagacaaaccc 313748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 332
Target Start/End: Original strand, 399552 - 399602
Alignment:
Q  282 ctacggttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 332  Q
    ||||| ||||||| | ||||||||||||| |||| ||||||||||||||||    
T  399552 ctacgtttagttgctataacatgtgcaatattgcgcatgttagacaaaccc 399602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 188
Target Start/End: Complemental strand, 38812923 - 38812881
Alignment:
Q  146 tatgagtttttctatcatgtgcaaatttgcatattttaagaag 188  Q
    |||| |||||||||||||||||||||||||| || ||||||||    
T  38812923 tatgggtttttctatcatgtgcaaatttgcacatgttaagaag 38812881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 331
Target Start/End: Complemental strand, 44918058 - 44918024
Alignment:
Q  297 ttaacatgtgcaatgttgcacatgttagacaaacc 331  Q
    |||||||||||||| ||||||||||||||||||||    
T  44918058 ttaacatgtgcaatattgcacatgttagacaaacc 44918024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 188
Target Start/End: Complemental strand, 313927 - 313890
Alignment:
Q  151 gtttttctatcatgtgcaaatttgcatattttaagaag 188  Q
    |||||||||||||||||||||||||| || ||||||||    
T  313927 gtttttctatcatgtgcaaatttgcacatgttaagaag 313890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 188
Target Start/End: Complemental strand, 6180364 - 6180327
Alignment:
Q  151 gtttttctatcatgtgcaaatttgcatattttaagaag 188  Q
    |||||||||||||||||||||||||| || ||||||||    
T  6180364 gtttttctatcatgtgcaaatttgcacatgttaagaag 6180327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 333
Target Start/End: Complemental strand, 6307537 - 6307500
Alignment:
Q  296 tttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    |||||||| |||||| ||||||||||||||||||||||    
T  6307537 tttaacatatgcaattttgcacatgttagacaaaccct 6307500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 188
Target Start/End: Original strand, 6569985 - 6570022
Alignment:
Q  151 gtttttctatcatgtgcaaatttgcatattttaagaag 188  Q
    |||||||||||||||||||||||||| || ||||||||    
T  6569985 gtttttctatcatgtgcaaatttgcacatgttaagaag 6570022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 333
Target Start/End: Complemental strand, 6754514 - 6754469
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    |||||||  |||||||||||||| ||||||||||||||||| ||||    
T  6754514 ttagttgccttaacatgtgcaatattgcacatgttagacaatccct 6754469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 333
Target Start/End: Complemental strand, 17919496 - 17919451
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    |||||||  ||||||||| |||| ||||||||||||||||||||||    
T  17919496 ttagttgccttaacatgtacaatattgcacatgttagacaaaccct 17919451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 188
Target Start/End: Complemental strand, 25465336 - 25465299
Alignment:
Q  151 gtttttctatcatgtgcaaatttgcatattttaagaag 188  Q
    |||||||||||||||||||||||||| || ||||||||    
T  25465336 gtttttctatcatgtgcaaatttgcacatgttaagaag 25465299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 188
Target Start/End: Complemental strand, 30172057 - 30172020
Alignment:
Q  151 gtttttctatcatgtgcaaatttgcatattttaagaag 188  Q
    |||||||||||||||||||||||||| || ||||||||    
T  30172057 gtttttctatcatgtgcaaatttgcacatgttaagaag 30172020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 188
Target Start/End: Complemental strand, 30187598 - 30187561
Alignment:
Q  151 gtttttctatcatgtgcaaatttgcatattttaagaag 188  Q
    |||||||||||||||||||||||||| || ||||||||    
T  30187598 gtttttctatcatgtgcaaatttgcacatgttaagaag 30187561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 329
Target Start/End: Original strand, 31737669 - 31737710
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaa 329  Q
    |||||| |||||||||||| ||||||||| ||||||||||||    
T  31737669 ttagttattttaacatgtgtaatgttgcatatgttagacaaa 31737710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 188
Target Start/End: Complemental strand, 34802145 - 34802108
Alignment:
Q  151 gtttttctatcatgtgcaaatttgcatattttaagaag 188  Q
    |||||||||||||||||||||||||| || ||||||||    
T  34802145 gtttttctatcatgtgcaaatttgcacatgttaagaag 34802108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 188
Target Start/End: Complemental strand, 35512903 - 35512866
Alignment:
Q  151 gtttttctatcatgtgcaaatttgcatattttaagaag 188  Q
    |||||||||||||||||||||||||| || ||||||||    
T  35512903 gtttttctatcatgtgcaaatttgcacatgttaagaag 35512866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 188
Target Start/End: Complemental strand, 41625007 - 41624970
Alignment:
Q  151 gtttttctatcatgtgcaaatttgcatattttaagaag 188  Q
    |||||||||||||||||||||||||||||  |||||||    
T  41625007 gtttttctatcatgtgcaaatttgcatatgataagaag 41624970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 176
Target Start/End: Original strand, 51920427 - 51920456
Alignment:
Q  147 atgagtttttctatcatgtgcaaatttgca 176  Q
    ||||||||||||||||||||||||||||||    
T  51920427 atgagtttttctatcatgtgcaaatttgca 51920456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 187
Target Start/End: Original strand, 1502720 - 1502756
Alignment:
Q  151 gtttttctatcatgtgcaaatttgcatattttaagaa 187  Q
    |||||||||||||||||||||||||| || |||||||    
T  1502720 gtttttctatcatgtgcaaatttgcacatgttaagaa 1502756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 152 - 188
Target Start/End: Original strand, 5875216 - 5875252
Alignment:
Q  152 tttttctatcatgtgcaaatttgcatattttaagaag 188  Q
    ||||||||||||||||||||||||| || ||||||||    
T  5875216 tttttctatcatgtgcaaatttgcacatgttaagaag 5875252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 187
Target Start/End: Original strand, 23576414 - 23576450
Alignment:
Q  151 gtttttctatcatgtgcaaatttgcatattttaagaa 187  Q
    |||||||||||||||||||||||||| || |||||||    
T  23576414 gtttttctatcatgtgcaaatttgcacatgttaagaa 23576450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 329
Target Start/End: Original strand, 32716307 - 32716339
Alignment:
Q  297 ttaacatgtgcaatgttgcacatgttagacaaa 329  Q
    |||||||||||||| ||||||||||||||||||    
T  32716307 ttaacatgtgcaatattgcacatgttagacaaa 32716339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 1e-16; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 288 - 332
Target Start/End: Original strand, 26003627 - 26003671
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 332  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  26003627 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 26003671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 288 - 329
Target Start/End: Complemental strand, 7720157 - 7720116
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaa 329  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  7720157 ttagttgttttaacatgtgcaatgttgcacatgttagacaaa 7720116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 288 - 333
Target Start/End: Complemental strand, 16755013 - 16754968
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    |||||||||||||||| |||||||||||||||||||||||||||||    
T  16755013 ttagttgttttaacatttgcaatgttgcacatgttagacaaaccct 16754968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 292 - 333
Target Start/End: Complemental strand, 43806398 - 43806357
Alignment:
Q  292 ttgttttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  43806398 ttgttttaacatgtgcaatgttgcacatgttagacaaaccct 43806357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 288 - 333
Target Start/End: Original strand, 36612867 - 36612912
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||    
T  36612867 ttagttattttaacatgagcaatgttgcacatgttagacaaaccct 36612912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 288 - 333
Target Start/End: Original strand, 36620718 - 36620763
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||    
T  36620718 ttagttattttaacatgagcaatgttgcacatgttagacaaaccct 36620763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 288 - 332
Target Start/End: Original strand, 38148337 - 38148381
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 332  Q
    |||||||||||||||||||||| |||||||||| |||||||||||    
T  38148337 ttagttgttttaacatgtgcaaagttgcacatggtagacaaaccc 38148381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 149 - 188
Target Start/End: Complemental strand, 23932745 - 23932706
Alignment:
Q  149 gagtttttctatcatgtgcaaatttgcatattttaagaag 188  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  23932745 gagtttttctatcatgtgcaaatttgcatatattaagaag 23932706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 188
Target Start/End: Original strand, 5853458 - 5853500
Alignment:
Q  146 tatgagtttttctatcatgtgcaaatttgcatattttaagaag 188  Q
    ||||||||||||||||||||||||||||||| || ||||||||    
T  5853458 tatgagtttttctatcatgtgcaaatttgcacatgttaagaag 5853500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 188
Target Start/End: Original strand, 16493527 - 16493569
Alignment:
Q  146 tatgagtttttctatcatgtgcaaatttgcatattttaagaag 188  Q
    ||||||||||||||||||||||||||||||| || ||||||||    
T  16493527 tatgagtttttctatcatgtgcaaatttgcacatgttaagaag 16493569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 188
Target Start/End: Complemental strand, 22704720 - 22704678
Alignment:
Q  146 tatgagtttttctatcatgtgcaaatttgcatattttaagaag 188  Q
    ||||||||||||||||||||||||||||||| || ||||||||    
T  22704720 tatgagtttttctatcatgtgcaaatttgcacatcttaagaag 22704678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 292 - 333
Target Start/End: Original strand, 29981364 - 29981405
Alignment:
Q  292 ttgttttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    ||||||||||||||||||| ||||| ||||||||||||||||    
T  29981364 ttgttttaacatgtgcaatattgcatatgttagacaaaccct 29981405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 147 - 188
Target Start/End: Complemental strand, 45062380 - 45062339
Alignment:
Q  147 atgagtttttctatcatgtgcaaatttgcatattttaagaag 188  Q
    |||||||||||||||||||||||||||||| || ||||||||    
T  45062380 atgagtttttctatcatgtgcaaatttgcacatattaagaag 45062339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 333
Target Start/End: Complemental strand, 12016700 - 12016664
Alignment:
Q  297 ttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    |||||||||||||| ||||||||||||||||||||||    
T  12016700 ttaacatgtgcaatattgcacatgttagacaaaccct 12016664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 332
Target Start/End: Original strand, 15411766 - 15411802
Alignment:
Q  296 tttaacatgtgcaatgttgcacatgttagacaaaccc 332  Q
    ||||||||||||||| |||||||||||||||||||||    
T  15411766 tttaacatgtgcaatattgcacatgttagacaaaccc 15411802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 333
Target Start/End: Original strand, 16126703 - 16126739
Alignment:
Q  297 ttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    |||||||||||||| ||||||||||||||||||||||    
T  16126703 ttaacatgtgcaatattgcacatgttagacaaaccct 16126739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 333
Target Start/End: Complemental strand, 19228459 - 19228423
Alignment:
Q  297 ttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    |||||||||||||| ||||||||||||||||||||||    
T  19228459 ttaacatgtgcaatattgcacatgttagacaaaccct 19228423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 332
Target Start/End: Complemental strand, 23932599 - 23932563
Alignment:
Q  296 tttaacatgtgcaatgttgcacatgttagacaaaccc 332  Q
    ||||||||||||||| |||||||||||||||||||||    
T  23932599 tttaacatgtgcaatattgcacatgttagacaaaccc 23932563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 333
Target Start/End: Original strand, 26229997 - 26230033
Alignment:
Q  297 ttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    |||||||||||||| ||||||||||||||||||||||    
T  26229997 ttaacatgtgcaatattgcacatgttagacaaaccct 26230033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 332
Target Start/End: Original strand, 27665179 - 27665223
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 332  Q
    |||||||  |||||||||||||| |||||||||||||||||||||    
T  27665179 ttagttgccttaacatgtgcaatattgcacatgttagacaaaccc 27665223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 332
Target Start/End: Complemental strand, 35729150 - 35729114
Alignment:
Q  296 tttaacatgtgcaatgttgcacatgttagacaaaccc 332  Q
    ||||||||||||||| |||||||||||||||||||||    
T  35729150 tttaacatgtgcaatattgcacatgttagacaaaccc 35729114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 297 - 332
Target Start/End: Original strand, 5583702 - 5583737
Alignment:
Q  297 ttaacatgtgcaatgttgcacatgttagacaaaccc 332  Q
    |||||||||||||| |||||||||||||||||||||    
T  5583702 ttaacatgtgcaatattgcacatgttagacaaaccc 5583737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 288 - 327
Target Start/End: Complemental strand, 8064881 - 8064842
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagaca 327  Q
    |||| |||||||||| ||||||||||||||||||||||||    
T  8064881 ttagatgttttaacacgtgcaatgttgcacatgttagaca 8064842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 297 - 332
Target Start/End: Complemental strand, 10690816 - 10690781
Alignment:
Q  297 ttaacatgtgcaatgttgcacatgttagacaaaccc 332  Q
    |||||||||||||| |||||||||||||||||||||    
T  10690816 ttaacatgtgcaatattgcacatgttagacaaaccc 10690781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 149 - 188
Target Start/End: Original strand, 11660892 - 11660931
Alignment:
Q  149 gagtttttctatcatgtgcaaatttgcatattttaagaag 188  Q
    |||||||||||||||||||||||||||| || ||||||||    
T  11660892 gagtttttctatcatgtgcaaatttgcacatgttaagaag 11660931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 297 - 332
Target Start/End: Original strand, 16919298 - 16919333
Alignment:
Q  297 ttaacatgtgcaatgttgcacatgttagacaaaccc 332  Q
    |||||||||||||| |||||||||||||||||||||    
T  16919298 ttaacatgtgcaatattgcacatgttagacaaaccc 16919333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 297 - 332
Target Start/End: Complemental strand, 22705488 - 22705453
Alignment:
Q  297 ttaacatgtgcaatgttgcacatgttagacaaaccc 332  Q
    |||||||||||||| |||||||||||||||||||||    
T  22705488 ttaacatgtgcaatattgcacatgttagacaaaccc 22705453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 297 - 332
Target Start/End: Original strand, 39904192 - 39904227
Alignment:
Q  297 ttaacatgtgcaatgttgcacatgttagacaaaccc 332  Q
    |||||||||||||| |||||||||||||||||||||    
T  39904192 ttaacatgtgcaatattgcacatgttagacaaaccc 39904227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 188
Target Start/End: Complemental strand, 15232014 - 15231972
Alignment:
Q  146 tatgagtttttctatcatgtgcaaatttgcatattttaagaag 188  Q
    ||||||||||||||| ||||||||||||||| || ||||||||    
T  15232014 tatgagtttttctattatgtgcaaatttgcacatgttaagaag 15231972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 188
Target Start/End: Complemental strand, 6109567 - 6109530
Alignment:
Q  151 gtttttctatcatgtgcaaatttgcatattttaagaag 188  Q
    |||||||||||||||||||||||||| || ||||||||    
T  6109567 gtttttctatcatgtgcaaatttgcacatgttaagaag 6109530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 188
Target Start/End: Complemental strand, 8065301 - 8065264
Alignment:
Q  151 gtttttctatcatgtgcaaatttgcatattttaagaag 188  Q
    |||||||||||||||||||||||||| || ||||||||    
T  8065301 gtttttctatcatgtgcaaatttgcacatgttaagaag 8065264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 188
Target Start/End: Complemental strand, 12016844 - 12016807
Alignment:
Q  151 gtttttctatcatgtgcaaatttgcatattttaagaag 188  Q
    |||||||||||||||||||||||||| || ||||||||    
T  12016844 gtttttctatcatgtgcaaatttgcacatattaagaag 12016807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 329
Target Start/End: Original strand, 12919495 - 12919528
Alignment:
Q  296 tttaacatgtgcaatgttgcacatgttagacaaa 329  Q
    ||||||||||||||| ||||||||||||||||||    
T  12919495 tttaacatgtgcaatattgcacatgttagacaaa 12919528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 188
Target Start/End: Original strand, 16126559 - 16126596
Alignment:
Q  151 gtttttctatcatgtgcaaatttgcatattttaagaag 188  Q
    |||||||||||||||||||||||||| || ||||||||    
T  16126559 gtttttctatcatgtgcaaatttgcacatgttaagaag 16126596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 333
Target Start/End: Complemental strand, 29795092 - 29795055
Alignment:
Q  296 tttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    ||||| ||||||||| ||||||||||||||||||||||    
T  29795092 tttaatatgtgcaatattgcacatgttagacaaaccct 29795055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 188
Target Start/End: Original strand, 43388481 - 43388518
Alignment:
Q  151 gtttttctatcatgtgcaaatttgcatattttaagaag 188  Q
    |||||||||||||||||||||||||| || ||||||||    
T  43388481 gtttttctatcatgtgcaaatttgcacatgttaagaag 43388518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 333
Target Start/End: Original strand, 43388902 - 43388947
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    ||||||| ||||| ||||||||| |||||||| |||||||||||||    
T  43388902 ttagttgctttaagatgtgcaatattgcacatattagacaaaccct 43388947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 187
Target Start/End: Original strand, 4576326 - 4576362
Alignment:
Q  151 gtttttctatcatgtgcaaatttgcatattttaagaa 187  Q
    |||||||||||||||||||||| |||||| |||||||    
T  4576326 gtttttctatcatgtgcaaattcgcatatgttaagaa 4576362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 332
Target Start/End: Complemental strand, 14377467 - 14377423
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 332  Q
    |||||||  |||||||||||||| |||||| ||||||||||||||    
T  14377467 ttagttgccttaacatgtgcaatattgcacgtgttagacaaaccc 14377423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 332
Target Start/End: Original strand, 20566161 - 20566197
Alignment:
Q  296 tttaacatgtgcaatgttgcacatgttagacaaaccc 332  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  20566161 tttaacatgtgcaatattgcacatgttagacagaccc 20566197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 187
Target Start/End: Original strand, 24729577 - 24729613
Alignment:
Q  151 gtttttctatcatgtgcaaatttgcatattttaagaa 187  Q
    |||||||||||||||||||||||||| || |||||||    
T  24729577 gtttttctatcatgtgcaaatttgcacatgttaagaa 24729613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 187
Target Start/End: Original strand, 29157829 - 29157865
Alignment:
Q  151 gtttttctatcatgtgcaaatttgcatattttaagaa 187  Q
    |||||||||||||||||||||||||| || |||||||    
T  29157829 gtttttctatcatgtgcaaatttgcacatgttaagaa 29157865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 187
Target Start/End: Original strand, 38248420 - 38248456
Alignment:
Q  151 gtttttctatcatgtgcaaatttgcatattttaagaa 187  Q
    |||||||||||||||||||||||||| || |||||||    
T  38248420 gtttttctatcatgtgcaaatttgcacatgttaagaa 38248456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 288 - 332
Target Start/End: Original strand, 13794 - 13838
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 332  Q
    |||||||||||||||||||||||||||||||||||||| ||||||    
T  13794 ttagttgttttaacatgtgcaatgttgcacatgttagaaaaaccc 13838  T

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Target: scaffold0036 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 188
Target Start/End: Original strand, 94014 - 94055
Alignment:
Q  147 atgagtttttctatcatgtgcaaatttgcatattttaagaag 188  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  94014 atgagtttttctatcatgtgcaaatttgcatatgttaagaag 94055  T

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Target: scaffold0036; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 288 - 329
Target Start/End: Original strand, 94154 - 94195
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaa 329  Q
    ||||||| ||||||||||||||||||||| ||||||||||||    
T  94154 ttagttgatttaacatgtgcaatgttgcatatgttagacaaa 94195  T

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Target: scaffold0028 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 288 - 333
Target Start/End: Original strand, 31836 - 31881
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||    
T  31836 ttagttgctctaacatgtgcaatgttgcacatgttagacaaaccct 31881  T

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Target: scaffold0111 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 297 - 332
Target Start/End: Original strand, 37259 - 37294
Alignment:
Q  297 ttaacatgtgcaatgttgcacatgttagacaaaccc 332  Q
    ||||||||||||||||||||||||||||||||||||    
T  37259 ttaacatgtgcaatgttgcacatgttagacaaaccc 37294  T

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Target: scaffold0111; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 188
Target Start/End: Original strand, 37114 - 37151
Alignment:
Q  151 gtttttctatcatgtgcaaatttgcatattttaagaag 188  Q
    |||||||||||||||||||||||||| || ||||||||    
T  37114 gtttttctatcatgtgcaaatttgcacatgttaagaag 37151  T

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Target: scaffold0061 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 333
Target Start/End: Original strand, 52923 - 52959
Alignment:
Q  297 ttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    |||||||||||||| ||||||||||||||||||||||    
T  52923 ttaacatgtgcaatattgcacatgttagacaaaccct 52959  T

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Target: scaffold0061; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 188
Target Start/End: Original strand, 52779 - 52816
Alignment:
Q  151 gtttttctatcatgtgcaaatttgcatattttaagaag 188  Q
    |||||||||||||||||||||||||| || ||||||||    
T  52779 gtttttctatcatgtgcaaatttgcacatgttaagaag 52816  T

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Target: scaffold0017 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 333
Target Start/End: Complemental strand, 145711 - 145675
Alignment:
Q  297 ttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    |||||||||||||| ||||||||||||||||||||||    
T  145711 ttaacatgtgcaatattgcacatgttagacaaaccct 145675  T

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Target: scaffold0017; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 188
Target Start/End: Complemental strand, 145855 - 145818
Alignment:
Q  151 gtttttctatcatgtgcaaatttgcatattttaagaag 188  Q
    |||||||||||||||||||||||||| || ||||||||    
T  145855 gtttttctatcatgtgcaaatttgcacatgttaagaag 145818  T

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Target: scaffold0631 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0631
Description:

Target: scaffold0631; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 329
Target Start/End: Complemental strand, 484 - 443
Alignment:
Q  288 ttagttgttttaacatgtgcaatgttgcacatgttagacaaa 329  Q
    ||||||| ||||||||||||||| |||||||||||| |||||    
T  484 ttagttgatttaacatgtgcaatattgcacatgttaaacaaa 443  T

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Target: scaffold0011 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 188
Target Start/End: Complemental strand, 13263 - 13226
Alignment:
Q  151 gtttttctatcatgtgcaaatttgcatattttaagaag 188  Q
    |||||||||||||||||||||||||| || ||||||||    
T  13263 gtttttctatcatgtgcaaatttgcacatgttaagaag 13226  T

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Target: scaffold0011; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 333
Target Start/End: Complemental strand, 13119 - 13083
Alignment:
Q  297 ttaacatgtgcaatgttgcacatgttagacaaaccct 333  Q
    ||||||| |||||| ||||||||||||||||||||||    
T  13119 ttaacatatgcaatattgcacatgttagacaaaccct 13083  T

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Target: scaffold0009 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 330
Target Start/End: Original strand, 193377 - 193410
Alignment:
Q  297 ttaacatgtgcaatgttgcacatgttagacaaac 330  Q
    |||||||||||||| |||||||||||||||||||    
T  193377 ttaacatgtgcaatattgcacatgttagacaaac 193410  T

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Target: scaffold0007 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 179
Target Start/End: Original strand, 2447 - 2476
Alignment:
Q  150 agtttttctatcatgtgcaaatttgcatat 179  Q
    ||||||||||||||||||||||||||||||    
T  2447 agtttttctatcatgtgcaaatttgcatat 2476  T

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Target: scaffold0727 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0727
Description:

Target: scaffold0727; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 329
Target Start/End: Complemental strand, 5724 - 5692
Alignment:
Q  297 ttaacatgtgcaatgttgcacatgttagacaaa 329  Q
    |||||||||||||| ||||||||||||||||||    
T  5724 ttaacatgtgcaatattgcacatgttagacaaa 5692  T

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Target: scaffold0305 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 302 - 330
Target Start/End: Original strand, 17951 - 17979
Alignment:
Q  302 atgtgcaatgttgcacatgttagacaaac 330  Q
    |||||||||||||||||||||||||||||    
T  17951 atgtgcaatgttgcacatgttagacaaac 17979  T

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