View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1441R-Insertion-16 (Length: 269)
Name: NF1441R-Insertion-16
Description: NF1441R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1441R-Insertion-16 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 7 - 269
Target Start/End: Complemental strand, 2343515 - 2343253
Alignment:
| Q |
7 |
cactttcaacaaggtaaatctctcatactctcttttatctctttatatcataaaaaggtaatcgattttattcgtgttttaaattgcagttgcggtcgtg |
106 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
2343515 |
cactttcaacaaggtaaatctctcatactctcttttatctctttatatcataaaaagttaatcgattttattcgtgttttaaattgcagttgcggtcgtg |
2343416 |
T |
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| Q |
107 |
ctacaaactttattgtgacaaaatacttacaattagaaaccatgcgactgtaattgtgattgcgatgtcatcacagagtcctttaaaactttattattgg |
206 |
Q |
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||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||| |||| |||||||||||||||||||||||||||||||||||| |
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| T |
2343415 |
ctacaaactttattgtgacaaaatactcacaattagaacccatgcgactgtgattgtggttgcaatgtcatcacagagtcctttaaaactttattattgg |
2343316 |
T |
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| Q |
207 |
actcatggttttaaattgtagtatataaccataattgtggtcacatcacaacatattttgagg |
269 |
Q |
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| |||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||| |
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| T |
2343315 |
agtcatggttttaaattgtagtctgtaaacataattgtggtcacatcacaacatattttgagg |
2343253 |
T |
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