View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1441R-Insertion-19 (Length: 209)
Name: NF1441R-Insertion-19
Description: NF1441R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1441R-Insertion-19 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 189; Significance: 1e-103; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 189; E-Value: 1e-103
Query Start/End: Original strand, 9 - 209
Target Start/End: Complemental strand, 55016320 - 55016120
Alignment:
| Q |
9 |
atttcgggatctccacattttccatcacttttcacgtaaactttccgtttccttatcaacggcactataagctccagctgtttcttcctcagcttcttcg |
108 |
Q |
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| T |
55016320 |
atttcgggatctccacattttccatcactttccacgtaaactttccgtttccttatcaacggcgctataagctccagctgtttcttcctcagcttcttcg |
55016221 |
T |
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| Q |
109 |
cttccttcacatgtccgcggaataatggtgttaaaaccggtaaaaaatctggaagcttaggaagcgtaatgagcatgacttctctgagaacactctcaat |
208 |
Q |
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| T |
55016220 |
cttccttcacatgtccgcggaataatggtgttaaaaccggtaaaaaatctggaagcttaggaagcgtaatgagcatgacttctttgagaacactctcaat |
55016121 |
T |
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| Q |
209 |
a |
209 |
Q |
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| T |
55016120 |
a |
55016120 |
T |
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