View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1441_high_116 (Length: 239)
Name: NF1441_high_116
Description: NF1441
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1441_high_116 |
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Alignment Details
Target: chr1 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 10 - 142
Target Start/End: Original strand, 32623506 - 32623638
Alignment:
| Q |
10 |
tatgccaggaaacaattgttagttttagatgcttggagtgacaggaaacaaacatagcagaatgggtcgggagccatcataaaaaatatatatttgttta |
109 |
Q |
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| T |
32623506 |
tatgccaggaaacaattgttagttttagatgcttggagtgacaggagacaaacatagcagaatgagtcgggagccatcataaaaaatatatatttgttta |
32623605 |
T |
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| Q |
110 |
tgttgtccaagtgttgtgtgaatattataatga |
142 |
Q |
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||||||||||||||||||||||||||||||||| |
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| T |
32623606 |
tgttgtccaagtgttgtgtgaatattataatga |
32623638 |
T |
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