View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1441_high_20 (Length: 411)

Name: NF1441_high_20
Description: NF1441
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1441_high_20
NF1441_high_20
[»] chr5 (36 HSPs)
chr5 (18-148)||(16883439-16883567)
chr5 (299-396)||(16883747-16883844)
chr5 (298-342)||(3398218-3398262)
chr5 (298-342)||(18841841-18841885)
chr5 (298-341)||(24014823-24014866)
chr5 (298-341)||(29856005-29856048)
chr5 (298-339)||(3738011-3738052)
chr5 (302-343)||(26376709-26376750)
chr5 (149-193)||(16883588-16883632)
chr5 (307-356)||(2795508-2795557)
chr5 (298-343)||(11250092-11250137)
chr5 (306-343)||(11636729-11636766)
chr5 (298-343)||(30328462-30328507)
chr5 (307-343)||(14466634-14466670)
chr5 (307-343)||(30839779-30839815)
chr5 (307-343)||(31366096-31366132)
chr5 (307-343)||(36597577-36597613)
chr5 (298-342)||(40166250-40166294)
chr5 (156-198)||(2795664-2795706)
chr5 (159-197)||(32019982-32020020)
chr5 (298-340)||(33072677-33072719)
chr5 (298-340)||(39043150-39043192)
chr5 (307-341)||(40512951-40512985)
chr5 (161-198)||(3398361-3398398)
chr5 (161-198)||(4047553-4047590)
chr5 (306-343)||(5958267-5958304)
chr5 (298-339)||(11692767-11692808)
chr5 (306-343)||(18150376-18150413)
chr5 (298-338)||(8103715-8103755)
chr5 (158-198)||(12641990-12642030)
chr5 (306-342)||(15241236-15241272)
chr5 (298-342)||(16160889-16160933)
chr5 (298-342)||(26265182-26265226)
chr5 (161-197)||(30839923-30839959)
chr5 (161-189)||(34333183-34333211)
chr5 (161-197)||(36597721-36597757)
[»] chr8 (57 HSPs)
chr8 (298-343)||(38843701-38843746)
chr8 (298-342)||(45005968-45006012)
chr8 (298-348)||(38213081-38213131)
chr8 (298-342)||(9580245-9580289)
chr8 (298-341)||(7750667-7750710)
chr8 (298-340)||(26682068-26682110)
chr8 (298-343)||(36967206-36967251)
chr8 (298-342)||(11117133-11117177)
chr8 (306-342)||(12131981-12132017)
chr8 (298-342)||(12189724-12189768)
chr8 (298-342)||(12434152-12434196)
chr8 (307-342)||(31812111-31812146)
chr8 (298-341)||(34869658-34869701)
chr8 (300-342)||(11923013-11923055)
chr8 (156-198)||(40225982-40226024)
chr8 (307-352)||(2161376-2161421)
chr8 (298-339)||(5911983-5912024)
chr8 (303-340)||(11977281-11977318)
chr8 (306-343)||(14816269-14816306)
chr8 (306-343)||(14829434-14829471)
chr8 (302-339)||(23840237-23840274)
chr8 (298-339)||(33430249-33430290)
chr8 (157-198)||(38212940-38212981)
chr8 (307-343)||(3306199-3306235)
chr8 (298-342)||(8284705-8284749)
chr8 (306-342)||(13496876-13496912)
chr8 (161-197)||(26834703-26834739)
chr8 (298-342)||(32186184-32186228)
chr8 (298-342)||(38527819-38527863)
chr8 (298-342)||(43717688-43717732)
chr8 (307-342)||(7140603-7140638)
chr8 (307-342)||(10129102-10129137)
chr8 (302-340)||(12346006-12346044)
chr8 (306-340)||(35678418-35678452)
chr8 (298-340)||(37523758-37523800)
chr8 (156-197)||(2161529-2161570)
chr8 (161-198)||(7140459-7140496)
chr8 (161-198)||(10129244-10129281)
chr8 (298-339)||(11947035-11947076)
chr8 (161-198)||(13496709-13496746)
chr8 (161-198)||(18567416-18567453)
chr8 (161-198)||(22838366-22838403)
chr8 (161-198)||(27874681-27874718)
chr8 (161-198)||(28014858-28014895)
chr8 (161-198)||(31812254-31812291)
chr8 (161-197)||(3306055-3306091)
chr8 (162-198)||(13327942-13327978)
chr8 (307-343)||(13328085-13328121)
chr8 (307-343)||(19343981-19344017)
chr8 (161-197)||(26682210-26682246)
chr8 (311-343)||(26834558-26834590)
chr8 (162-198)||(28866932-28866968)
chr8 (161-189)||(29642753-29642781)
chr8 (307-343)||(33514645-33514681)
chr8 (307-339)||(39701947-39701979)
chr8 (307-343)||(40210965-40211001)
chr8 (307-343)||(40716272-40716308)
[»] chr7 (37 HSPs)
chr7 (298-343)||(4969770-4969815)
chr7 (298-343)||(29398250-29398295)
chr7 (298-342)||(29692676-29692720)
chr7 (298-342)||(45501457-45501501)
chr7 (298-335)||(39475853-39475890)
chr7 (298-339)||(47457597-47457638)
chr7 (298-340)||(19868114-19868156)
chr7 (298-343)||(19889338-19889383)
chr7 (298-338)||(820673-820713)
chr7 (307-343)||(9331959-9331995)
chr7 (307-343)||(24250311-24250347)
chr7 (307-343)||(33342986-33343022)
chr7 (307-343)||(34270263-34270299)
chr7 (305-340)||(2444049-2444084)
chr7 (159-198)||(45501600-45501639)
chr7 (307-342)||(46290009-46290044)
chr7 (156-198)||(3561873-3561915)
chr7 (305-343)||(24857497-24857535)
chr7 (160-198)||(25709398-25709436)
chr7 (298-340)||(26300573-26300615)
chr7 (156-198)||(39757105-39757147)
chr7 (308-342)||(47120339-47120373)
chr7 (161-198)||(820541-820578)
chr7 (161-198)||(4969914-4969951)
chr7 (298-343)||(5909417-5909462)
chr7 (298-343)||(7170000-7170045)
chr7 (161-198)||(9332102-9332139)
chr7 (301-342)||(27696705-27696746)
chr7 (307-340)||(39757254-39757287)
chr7 (306-343)||(39869120-39869157)
chr7 (307-339)||(3562022-3562054)
chr7 (307-343)||(32117812-32117848)
chr7 (161-197)||(32117956-32117992)
chr7 (161-197)||(33343130-33343166)
chr7 (161-197)||(34270403-34270439)
chr7 (307-339)||(36548604-36548636)
chr7 (161-197)||(46290152-46290188)
[»] chr6 (29 HSPs)
chr6 (298-343)||(24979285-24979330)
chr6 (298-342)||(34692352-34692396)
chr6 (298-343)||(30623323-30623368)
chr6 (307-343)||(18332833-18332869)
chr6 (298-341)||(1814917-1814960)
chr6 (298-339)||(4371840-4371881)
chr6 (298-343)||(6016853-6016898)
chr6 (298-343)||(17596310-17596355)
chr6 (306-343)||(29863446-29863483)
chr6 (306-343)||(31791060-31791097)
chr6 (307-343)||(14228270-14228306)
chr6 (307-343)||(17552731-17552767)
chr6 (307-343)||(33017722-33017758)
chr6 (307-342)||(8977611-8977646)
chr6 (307-338)||(10887031-10887062)
chr6 (159-198)||(10887170-10887209)
chr6 (307-342)||(28943913-28943948)
chr6 (307-341)||(5363037-5363071)
chr6 (156-198)||(34692495-34692537)
chr6 (308-341)||(2086999-2087032)
chr6 (161-198)||(29863302-29863339)
chr6 (161-197)||(3853085-3853121)
chr6 (306-342)||(10345683-10345719)
chr6 (306-342)||(12220548-12220584)
chr6 (161-197)||(14228126-14228162)
chr6 (161-197)||(17552587-17552623)
chr6 (307-343)||(26602575-26602611)
chr6 (161-197)||(28943769-28943805)
chr6 (307-343)||(31568110-31568146)
[»] chr4 (46 HSPs)
chr4 (298-343)||(45742365-45742410)
chr4 (298-342)||(17409822-17409866)
chr4 (298-342)||(23545474-23545518)
chr4 (298-341)||(19468193-19468236)
chr4 (298-343)||(19451036-19451081)
chr4 (298-343)||(27019257-27019302)
chr4 (302-342)||(3085350-3085390)
chr4 (298-343)||(8736946-8736991)
chr4 (298-343)||(16667520-16667565)
chr4 (298-339)||(19838825-19838866)
chr4 (307-343)||(54495782-54495818)
chr4 (156-198)||(4779431-4779473)
chr4 (298-340)||(6875501-6875543)
chr4 (302-340)||(24243029-24243067)
chr4 (156-198)||(47326887-47326929)
chr4 (156-198)||(47341683-47341725)
chr4 (161-198)||(3085811-3085848)
chr4 (298-343)||(9971700-9971745)
chr4 (302-343)||(31955898-31955939)
chr4 (298-343)||(47327028-47327073)
chr4 (298-343)||(47341824-47341869)
chr4 (298-339)||(51691343-51691384)
chr4 (298-342)||(2096869-2096913)
chr4 (298-342)||(24684834-24684878)
chr4 (306-342)||(40049557-40049593)
chr4 (298-342)||(48910970-48911014)
chr4 (307-343)||(50352300-50352336)
chr4 (301-343)||(3726934-3726976)
chr4 (307-341)||(9759286-9759320)
chr4 (305-339)||(16069348-16069382)
chr4 (156-198)||(35999942-35999984)
chr4 (156-186)||(46803952-46803982)
chr4 (161-194)||(4329739-4329772)
chr4 (298-343)||(7349686-7349731)
chr4 (161-198)||(18882267-18882304)
chr4 (161-194)||(27019405-27019438)
chr4 (161-198)||(27362532-27362569)
chr4 (161-198)||(29190816-29190853)
chr4 (298-339)||(33632338-33632379)
chr4 (298-339)||(53376549-53376590)
chr4 (161-198)||(54495637-54495674)
chr4 (162-198)||(16667385-16667421)
chr4 (307-339)||(23553571-23553603)
chr4 (162-198)||(48910803-48910839)
chr4 (307-343)||(49228354-49228390)
chr4 (307-343)||(49332330-49332366)
[»] chr3 (42 HSPs)
chr3 (298-343)||(50204400-50204445)
chr3 (298-342)||(42180050-42180094)
chr3 (298-340)||(54527842-54527884)
chr3 (298-343)||(8165643-8165688)
chr3 (292-341)||(24086983-24087032)
chr3 (298-343)||(51567954-51567999)
chr3 (298-342)||(51618048-51618092)
chr3 (298-341)||(27549537-27549580)
chr3 (305-343)||(51400165-51400203)
chr3 (298-333)||(8497559-8497594)
chr3 (307-342)||(38389445-38389480)
chr3 (301-343)||(26499567-26499609)
chr3 (156-198)||(33474468-33474510)
chr3 (298-343)||(11610912-11610957)
chr3 (302-343)||(40930054-40930095)
chr3 (307-343)||(3863327-3863363)
chr3 (307-342)||(2571267-2571302)
chr3 (307-342)||(12515618-12515653)
chr3 (301-340)||(15664992-15665031)
chr3 (306-341)||(39365275-39365310)
chr3 (298-340)||(35415157-35415199)
chr3 (305-343)||(36426554-36426592)
chr3 (160-198)||(40930192-40930230)
chr3 (298-331)||(2379205-2379238)
chr3 (161-198)||(3863470-3863507)
chr3 (307-340)||(20938057-20938090)
chr3 (157-186)||(20938210-20938239)
chr3 (161-198)||(23523087-23523124)
chr3 (298-343)||(37444144-37444189)
chr3 (161-198)||(38389588-38389625)
chr3 (298-343)||(47386919-47386964)
chr3 (161-198)||(50204544-50204581)
chr3 (161-198)||(51618188-51618225)
chr3 (161-197)||(2571410-2571446)
chr3 (162-198)||(8165787-8165823)
chr3 (161-197)||(10307908-10307944)
chr3 (307-343)||(13495291-13495327)
chr3 (302-343)||(28992917-28992960)
chr3 (158-198)||(35414806-35414846)
chr3 (298-342)||(46845576-46845620)
chr3 (307-339)||(51339328-51339360)
chr3 (162-194)||(54016169-54016201)
[»] chr1 (44 HSPs)
chr1 (298-343)||(3168204-3168249)
chr1 (298-342)||(6180184-6180228)
chr1 (298-342)||(7824994-7825038)
chr1 (298-343)||(13321873-13321918)
chr1 (298-343)||(23591695-23591740)
chr1 (298-342)||(22167333-22167377)
chr1 (298-342)||(35512723-35512767)
chr1 (305-342)||(22331621-22331658)
chr1 (298-339)||(25186840-25186881)
chr1 (298-343)||(38812737-38812782)
chr1 (298-342)||(30171877-30171921)
chr1 (298-342)||(30187418-30187462)
chr1 (307-343)||(34801965-34802001)
chr1 (300-342)||(23808433-23808475)
chr1 (297-343)||(25532206-25532252)
chr1 (161-198)||(13322017-13322054)
chr1 (301-342)||(34050422-34050463)
chr1 (298-343)||(39150462-39150507)
chr1 (307-343)||(1502864-1502900)
chr1 (157-197)||(23591840-23591880)
chr1 (298-338)||(41624832-41624872)
chr1 (307-343)||(51382369-51382405)
chr1 (307-342)||(313748-313783)
chr1 (292-342)||(399552-399602)
chr1 (156-198)||(38812881-38812923)
chr1 (307-341)||(44918024-44918058)
chr1 (161-198)||(313890-313927)
chr1 (161-198)||(6180327-6180364)
chr1 (306-343)||(6307500-6307537)
chr1 (161-198)||(6569985-6570022)
chr1 (298-343)||(6754469-6754514)
chr1 (298-343)||(17919451-17919496)
chr1 (161-198)||(25465299-25465336)
chr1 (161-198)||(30172020-30172057)
chr1 (161-198)||(30187561-30187598)
chr1 (298-339)||(31737669-31737710)
chr1 (161-198)||(34802108-34802145)
chr1 (161-198)||(35512866-35512903)
chr1 (161-198)||(41624970-41625007)
chr1 (157-186)||(51920427-51920456)
chr1 (161-197)||(1502720-1502756)
chr1 (162-198)||(5875216-5875252)
chr1 (161-197)||(23576414-23576450)
chr1 (307-339)||(32716307-32716339)
[»] chr2 (43 HSPs)
chr2 (298-342)||(26003627-26003671)
chr2 (298-339)||(7720116-7720157)
chr2 (298-343)||(16754968-16755013)
chr2 (302-343)||(43806357-43806398)
chr2 (298-343)||(36612867-36612912)
chr2 (298-343)||(36620718-36620763)
chr2 (298-342)||(38148337-38148381)
chr2 (159-198)||(23932706-23932745)
chr2 (156-198)||(5853458-5853500)
chr2 (156-198)||(16493527-16493569)
chr2 (156-198)||(22704678-22704720)
chr2 (302-343)||(29981364-29981405)
chr2 (157-198)||(45062339-45062380)
chr2 (307-343)||(12016664-12016700)
chr2 (306-342)||(15411766-15411802)
chr2 (307-343)||(16126703-16126739)
chr2 (307-343)||(19228423-19228459)
chr2 (306-342)||(23932563-23932599)
chr2 (307-343)||(26229997-26230033)
chr2 (298-342)||(27665179-27665223)
chr2 (306-342)||(35729114-35729150)
chr2 (307-342)||(5583702-5583737)
chr2 (298-337)||(8064842-8064881)
chr2 (307-342)||(10690781-10690816)
chr2 (159-198)||(11660892-11660931)
chr2 (307-342)||(16919298-16919333)
chr2 (307-342)||(22705453-22705488)
chr2 (307-342)||(39904192-39904227)
chr2 (156-198)||(15231972-15232014)
chr2 (161-198)||(6109530-6109567)
chr2 (161-198)||(8065264-8065301)
chr2 (161-198)||(12016807-12016844)
chr2 (306-339)||(12919495-12919528)
chr2 (161-198)||(16126559-16126596)
chr2 (306-343)||(29795055-29795092)
chr2 (161-198)||(43388481-43388518)
chr2 (298-343)||(43388902-43388947)
chr2 (161-197)||(4576326-4576362)
chr2 (298-342)||(14377423-14377467)
chr2 (306-342)||(20566161-20566197)
chr2 (161-197)||(24729577-24729613)
chr2 (161-197)||(29157829-29157865)
chr2 (161-197)||(38248420-38248456)
[»] scaffold0129 (1 HSPs)
scaffold0129 (298-342)||(13794-13838)
[»] scaffold0036 (2 HSPs)
scaffold0036 (157-198)||(94014-94055)
scaffold0036 (298-339)||(94154-94195)
[»] scaffold0028 (1 HSPs)
scaffold0028 (298-343)||(31836-31881)
[»] scaffold0111 (2 HSPs)
scaffold0111 (307-342)||(37259-37294)
scaffold0111 (161-198)||(37114-37151)
[»] scaffold0061 (2 HSPs)
scaffold0061 (307-343)||(52923-52959)
scaffold0061 (161-198)||(52779-52816)
[»] scaffold0017 (2 HSPs)
scaffold0017 (307-343)||(145675-145711)
scaffold0017 (161-198)||(145818-145855)
[»] scaffold0631 (1 HSPs)
scaffold0631 (298-339)||(443-484)
[»] scaffold0011 (2 HSPs)
scaffold0011 (161-198)||(13226-13263)
scaffold0011 (307-343)||(13083-13119)
[»] scaffold0009 (1 HSPs)
scaffold0009 (307-340)||(193377-193410)
[»] scaffold0007 (1 HSPs)
scaffold0007 (160-189)||(2447-2476)
[»] scaffold0727 (1 HSPs)
scaffold0727 (307-339)||(5692-5724)
[»] scaffold0305 (1 HSPs)
scaffold0305 (312-340)||(17951-17979)


Alignment Details
Target: chr5 (Bit Score: 116; Significance: 7e-59; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 18 - 148
Target Start/End: Original strand, 16883439 - 16883567
Alignment:
Q  18 aattactgtaaatttgtgtaatgttttatgcacaaaaatacttattcaaaaaactgcggacaattctttcctgcatacaacttgttcaatctcagcatat 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  16883439 aattactgtaaatttgtgtaatgttttatgcacaaaaatacttattcaaaaaactgcggacaattctttcctgcatacaacttgttcgatctcagcatat 16883538  T
Q  118 gcaacatgtgttaactgaatttgatttcagc 148  Q
    |||||  ||||||||||||||||||||||||    
T  16883539 gcaac--gtgttaactgaatttgatttcagc 16883567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 299 - 396
Target Start/End: Original strand, 16883747 - 16883844
Alignment:
Q  299 tagttgttttaacatgtgcaatgttgcacatgttagacaaaccctgctaatataacatatctgcaacttgtacttgcagacatcctttacagtctctg 396  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  16883747 tagttgttttaacatgtgcaatgttgcacatgttagacaaaccctactaatataacttatctgcaacttgtacttgcagacatcctttacagtctctg 16883844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 298 - 342
Target Start/End: Complemental strand, 3398262 - 3398218
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 342  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  3398262 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 3398218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 298 - 342
Target Start/End: Original strand, 18841841 - 18841885
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 342  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  18841841 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 18841885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 298 - 341
Target Start/End: Original strand, 24014823 - 24014866
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaacc 341  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  24014823 ttagttgttttaacatgtgcaatgttgcacatgttagacaaacc 24014866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 298 - 341
Target Start/End: Original strand, 29856005 - 29856048
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaacc 341  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  29856005 ttagttgttttaacatgtgcaatgttgcacatgttagagaaacc 29856048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 298 - 339
Target Start/End: Original strand, 3738011 - 3738052
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaa 339  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  3738011 ttagttgttttaacatgtgcaatgttgcacatattagacaaa 3738052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 302 - 343
Target Start/End: Original strand, 26376709 - 26376750
Alignment:
Q  302 ttgttttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  26376709 ttgttttaacatgtacaatgttgcacatgttagacaaaccct 26376750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 16883588 - 16883632
Alignment:
Q  149 atactactatgagtttttctatcatgtgcaaatttgcatatttta 193  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||    
T  16883588 atactactatgagtttttctatcatgtacaaatttgcacatttta 16883632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 307 - 356
Target Start/End: Complemental strand, 2795557 - 2795508
Alignment:
Q  307 ttaacatgtgcaatgttgcacatgttagacaaaccctgctaatataacat 356  Q
    |||||||||||||| ||||||||||||||||||||||  |||||| ||||    
T  2795557 ttaacatgtgcaatattgcacatgttagacaaacccttttaatattacat 2795508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 298 - 343
Target Start/End: Original strand, 11250092 - 11250137
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    ||||||| ||||||||||||||| |||||||||||| |||||||||    
T  11250092 ttagttgctttaacatgtgcaatattgcacatgttaaacaaaccct 11250137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 306 - 343
Target Start/End: Complemental strand, 11636766 - 11636729
Alignment:
Q  306 tttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  11636766 tttaacatgtgcaatattgcacatgttagacaaaccct 11636729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 298 - 343
Target Start/End: Original strand, 30328462 - 30328507
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    |||||| | |||||||||||||| ||||||||||||||||||||||    
T  30328462 ttagttatcttaacatgtgcaatattgcacatgttagacaaaccct 30328507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 343
Target Start/End: Original strand, 14466634 - 14466670
Alignment:
Q  307 ttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    |||||||||||||| ||||||||||||||||||||||    
T  14466634 ttaacatgtgcaatattgcacatgttagacaaaccct 14466670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 343
Target Start/End: Complemental strand, 30839815 - 30839779
Alignment:
Q  307 ttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    |||||||||||||| ||||||||||||||||||||||    
T  30839815 ttaacatgtgcaatattgcacatgttagacaaaccct 30839779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 343
Target Start/End: Original strand, 31366096 - 31366132
Alignment:
Q  307 ttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    |||||||||||||| ||||||||||||||||||||||    
T  31366096 ttaacatgtgcaatattgcacatgttagacaaaccct 31366132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 343
Target Start/End: Complemental strand, 36597613 - 36597577
Alignment:
Q  307 ttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    |||||||||||||| ||||||||||||||||||||||    
T  36597613 ttaacatgtgcaatattgcacatgttagacaaaccct 36597577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 298 - 342
Target Start/End: Complemental strand, 40166294 - 40166250
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 342  Q
    |||||||||||||||||||||||  | ||||||||||||||||||    
T  40166294 ttagttgttttaacatgtgcaatactccacatgttagacaaaccc 40166250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 156 - 198
Target Start/End: Complemental strand, 2795706 - 2795664
Alignment:
Q  156 tatgagtttttctatcatgtgcaaatttgcatattttaagaag 198  Q
    |||| |||||||||||||||||||||||||| || ||||||||    
T  2795706 tatgggtttttctatcatgtgcaaatttgcacatgttaagaag 2795664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 159 - 197
Target Start/End: Original strand, 32019982 - 32020020
Alignment:
Q  159 gagtttttctatcatgtgcaaatttgcatattttaagaa 197  Q
    |||||||||||||||||||||||||||| || |||||||    
T  32019982 gagtttttctatcatgtgcaaatttgcacatgttaagaa 32020020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 298 - 340
Target Start/End: Complemental strand, 33072719 - 33072677
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaac 340  Q
    ||||||| ||||||||||||||| |||||||||||| ||||||    
T  33072719 ttagttgatttaacatgtgcaatattgcacatgttaaacaaac 33072677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 298 - 340
Target Start/End: Complemental strand, 39043192 - 39043150
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaac 340  Q
    |||||||||||||||| ||||||| ||||||||||||| ||||    
T  39043192 ttagttgttttaacatatgcaatggtgcacatgttagataaac 39043150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 307 - 341
Target Start/End: Complemental strand, 40512985 - 40512951
Alignment:
Q  307 ttaacatgtgcaatgttgcacatgttagacaaacc 341  Q
    |||||||||||||| ||||||||||||||||||||    
T  40512985 ttaacatgtgcaatattgcacatgttagacaaacc 40512951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 198
Target Start/End: Complemental strand, 3398398 - 3398361
Alignment:
Q  161 gtttttctatcatgtgcaaatttgcatattttaagaag 198  Q
    |||||||||||||||||||||||||| || ||||||||    
T  3398398 gtttttctatcatgtgcaaatttgcacatgttaagaag 3398361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 198
Target Start/End: Complemental strand, 4047590 - 4047553
Alignment:
Q  161 gtttttctatcatgtgcaaatttgcatattttaagaag 198  Q
    |||||||||||||||||||||||||| || ||||||||    
T  4047590 gtttttctatcatgtgcaaatttgcacatgttaagaag 4047553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 343
Target Start/End: Original strand, 5958267 - 5958304
Alignment:
Q  306 tttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    ||||||||||| ||| ||||||||||||||||||||||    
T  5958267 tttaacatgtgtaatattgcacatgttagacaaaccct 5958304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 339
Target Start/End: Original strand, 11692767 - 11692808
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaa 339  Q
    |||||| |||||||||||||||| ||| ||||||||||||||    
T  11692767 ttagttattttaacatgtgcaatattgtacatgttagacaaa 11692808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 343
Target Start/End: Complemental strand, 18150413 - 18150376
Alignment:
Q  306 tttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    |||||||| |||||| ||||||||||||||||||||||    
T  18150413 tttaacatatgcaatattgcacatgttagacaaaccct 18150376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 298 - 338
Target Start/End: Original strand, 8103715 - 8103755
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaa 338  Q
    |||||||  |||||||||||||| |||||||||||||||||    
T  8103715 ttagttgccttaacatgtgcaatattgcacatgttagacaa 8103755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 158 - 198
Target Start/End: Original strand, 12641990 - 12642030
Alignment:
Q  158 tgagtttttctatcatgtgcaaatttgcatattttaagaag 198  Q
    ||||||||||||| ||||||||||||||| || ||||||||    
T  12641990 tgagtttttctataatgtgcaaatttgcacatgttaagaag 12642030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 306 - 342
Target Start/End: Original strand, 15241236 - 15241272
Alignment:
Q  306 tttaacatgtgcaatgttgcacatgttagacaaaccc 342  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  15241236 tttaacatgtgcaatattgcatatgttagacaaaccc 15241272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 298 - 342
Target Start/End: Complemental strand, 16160933 - 16160889
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 342  Q
    ||||||||||||||||||||||| || ||||||||  ||||||||    
T  16160933 ttagttgttttaacatgtgcaatattacacatgttttacaaaccc 16160889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 298 - 342
Target Start/End: Original strand, 26265182 - 26265226
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 342  Q
    |||||||||||||||| | |||||||  |||||||||||||||||    
T  26265182 ttagttgttttaacatatacaatgttaaacatgttagacaaaccc 26265226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 161 - 197
Target Start/End: Complemental strand, 30839959 - 30839923
Alignment:
Q  161 gtttttctatcatgtgcaaatttgcatattttaagaa 197  Q
    |||||||||||||||||||||||||| || |||||||    
T  30839959 gtttttctatcatgtgcaaatttgcacatgttaagaa 30839923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 161 - 189
Target Start/End: Original strand, 34333183 - 34333211
Alignment:
Q  161 gtttttctatcatgtgcaaatttgcatat 189  Q
    |||||||||||||||||||||||||||||    
T  34333183 gtttttctatcatgtgcaaatttgcatat 34333211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 161 - 197
Target Start/End: Complemental strand, 36597757 - 36597721
Alignment:
Q  161 gtttttctatcatgtgcaaatttgcatattttaagaa 197  Q
    |||||||||||||||||||||||||| || |||||||    
T  36597757 gtttttctatcatgtgcaaatttgcacatgttaagaa 36597721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 4e-17; HSPs: 57)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 298 - 343
Target Start/End: Complemental strand, 38843746 - 38843701
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  38843746 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 38843701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 298 - 342
Target Start/End: Complemental strand, 45006012 - 45005968
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 342  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  45006012 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 45005968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 298 - 348
Target Start/End: Original strand, 38213081 - 38213131
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccctgctaa 348  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  38213081 ttagttgttttaacatgtgcaatgttgcacatgttaaacaaacccttctaa 38213131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 298 - 342
Target Start/End: Original strand, 9580245 - 9580289
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 342  Q
    |||||||||||||||||||||||||||||||| ||||||||||||    
T  9580245 ttagttgttttaacatgtgcaatgttgcacatattagacaaaccc 9580289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 298 - 341
Target Start/End: Complemental strand, 7750710 - 7750667
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaacc 341  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  7750710 ttagttgttttaacatgtgcaatattgcacatgttagacaaacc 7750667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 298 - 340
Target Start/End: Complemental strand, 26682110 - 26682068
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaac 340  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  26682110 ttagttgttttaacatgtgcaatattgcacatgttagacaaac 26682068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 298 - 343
Target Start/End: Original strand, 36967206 - 36967251
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||    
T  36967206 ttagttgtcttaacatgtacaatgttgcacatgttagacaaaccct 36967251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 298 - 342
Target Start/End: Original strand, 11117133 - 11117177
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 342  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||    
T  11117133 ttagttgctttaacatgtgcaatattgcacatgttagacaaaccc 11117177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 306 - 342
Target Start/End: Complemental strand, 12132017 - 12131981
Alignment:
Q  306 tttaacatgtgcaatgttgcacatgttagacaaaccc 342  Q
    |||||||||||||||||||||||||||||||||||||    
T  12132017 tttaacatgtgcaatgttgcacatgttagacaaaccc 12131981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 298 - 342
Target Start/End: Original strand, 12189724 - 12189768
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 342  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||    
T  12189724 ttagttgttttaacatgtgcaatgctgcacatgttaaacaaaccc 12189768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 298 - 342
Target Start/End: Original strand, 12434152 - 12434196
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 342  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||    
T  12434152 ttagttgttttaacatgtgcaatgctgcacatgttaaacaaaccc 12434196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 307 - 342
Target Start/End: Complemental strand, 31812146 - 31812111
Alignment:
Q  307 ttaacatgtgcaatgttgcacatgttagacaaaccc 342  Q
    ||||||||||||||||||||||||||||||||||||    
T  31812146 ttaacatgtgcaatgttgcacatgttagacaaaccc 31812111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 298 - 341
Target Start/End: Original strand, 34869658 - 34869701
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaacc 341  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||    
T  34869658 ttagttgttttaacacgtgcaatgttgcacatgtttgacaaacc 34869701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 300 - 342
Target Start/End: Complemental strand, 11923055 - 11923013
Alignment:
Q  300 agttgttttaacatgtgcaatgttgcacatgttagacaaaccc 342  Q
    |||||||||||| |||||||| |||||||||||||||||||||    
T  11923055 agttgttttaacttgtgcaatattgcacatgttagacaaaccc 11923013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 198
Target Start/End: Original strand, 40225982 - 40226024
Alignment:
Q  156 tatgagtttttctatcatgtgcaaatttgcatattttaagaag 198  Q
    ||||||||||||||||||||||||||||||| || ||||||||    
T  40225982 tatgagtttttctatcatgtgcaaatttgcacatgttaagaag 40226024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 307 - 352
Target Start/End: Complemental strand, 2161421 - 2161376
Alignment:
Q  307 ttaacatgtgcaatgttgcacatgttagacaaaccctgctaatata 352  Q
    |||||||||||||| ||||||||||||||||||||||  |||||||    
T  2161421 ttaacatgtgcaatattgcacatgttagacaaacccttttaatata 2161376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 298 - 339
Target Start/End: Original strand, 5911983 - 5912024
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaa 339  Q
    ||||||||||||| ||| ||||||||||||||||||||||||    
T  5911983 ttagttgttttaatatgagcaatgttgcacatgttagacaaa 5912024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 11977281 - 11977318
Alignment:
Q  303 tgttttaacatgtgcaatgttgcacatgttagacaaac 340  Q
    |||||||||||||| |||||||||||||||||||||||    
T  11977281 tgttttaacatgtgtaatgttgcacatgttagacaaac 11977318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 306 - 343
Target Start/End: Original strand, 14816269 - 14816306
Alignment:
Q  306 tttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  14816269 tttaacatgtgcaatattgcacatgttagacaaaccct 14816306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 306 - 343
Target Start/End: Complemental strand, 14829471 - 14829434
Alignment:
Q  306 tttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  14829471 tttaacatgtgcaatattgcacatgttagacaaaccct 14829434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 302 - 339
Target Start/End: Complemental strand, 23840274 - 23840237
Alignment:
Q  302 ttgttttaacatgtgcaatgttgcacatgttagacaaa 339  Q
    |||||||||||||||| |||||||||||||||||||||    
T  23840274 ttgttttaacatgtgccatgttgcacatgttagacaaa 23840237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 298 - 339
Target Start/End: Original strand, 33430249 - 33430290
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaa 339  Q
    ||||||||||||| ||||||||||||| ||||||||||||||    
T  33430249 ttagttgttttaatatgtgcaatgttgaacatgttagacaaa 33430290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 157 - 198
Target Start/End: Original strand, 38212940 - 38212981
Alignment:
Q  157 atgagtttttctatcatgtgcaaatttgcatattttaagaag 198  Q
    |||||||||||||||||||||||||||||| || ||||||||    
T  38212940 atgagtttttctatcatgtgcaaatttgcacatgttaagaag 38212981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 343
Target Start/End: Original strand, 3306199 - 3306235
Alignment:
Q  307 ttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    |||||||||||||| ||||||||||||||||||||||    
T  3306199 ttaacatgtgcaatattgcacatgttagacaaaccct 3306235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 298 - 342
Target Start/End: Original strand, 8284705 - 8284749
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 342  Q
    ||||||| |||||||||||||||  ||||||||||||||||||||    
T  8284705 ttagttgctttaacatgtgcaatactgcacatgttagacaaaccc 8284749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 342
Target Start/End: Original strand, 13496876 - 13496912
Alignment:
Q  306 tttaacatgtgcaatgttgcacatgttagacaaaccc 342  Q
    ||||||||||||||| |||||||||||||||||||||    
T  13496876 tttaacatgtgcaatattgcacatgttagacaaaccc 13496912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 197
Target Start/End: Complemental strand, 26834739 - 26834703
Alignment:
Q  161 gtttttctatcatgtgcaaatttgcatattttaagaa 197  Q
    ||||||||||||||||||||||||||||| |||||||    
T  26834739 gtttttctatcatgtgcaaatttgcatatattaagaa 26834703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 298 - 342
Target Start/End: Complemental strand, 32186228 - 32186184
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 342  Q
    |||||||||||||||| ||||||||||| ||||||| ||||||||    
T  32186228 ttagttgttttaacatttgcaatgttgctcatgttaaacaaaccc 32186184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 298 - 342
Target Start/End: Complemental strand, 38527863 - 38527819
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 342  Q
    |||||||  |||||||||||||| |||||||||||||||||||||    
T  38527863 ttagttgccttaacatgtgcaatattgcacatgttagacaaaccc 38527819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 298 - 342
Target Start/End: Original strand, 43717688 - 43717732
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 342  Q
    ||||||| ||||||||||||||  |||||||||||||||||||||    
T  43717688 ttagttgctttaacatgtgcaacattgcacatgttagacaaaccc 43717732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 307 - 342
Target Start/End: Original strand, 7140603 - 7140638
Alignment:
Q  307 ttaacatgtgcaatgttgcacatgttagacaaaccc 342  Q
    |||||||||||||| |||||||||||||||||||||    
T  7140603 ttaacatgtgcaatattgcacatgttagacaaaccc 7140638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 307 - 342
Target Start/End: Complemental strand, 10129137 - 10129102
Alignment:
Q  307 ttaacatgtgcaatgttgcacatgttagacaaaccc 342  Q
    |||||||||||||| |||||||||||||||||||||    
T  10129137 ttaacatgtgcaatattgcacatgttagacaaaccc 10129102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 302 - 340
Target Start/End: Complemental strand, 12346044 - 12346006
Alignment:
Q  302 ttgttttaacatgtgcaatgttgcacatgttagacaaac 340  Q
    ||||||||||||||| |||||||||||||| ||||||||    
T  12346044 ttgttttaacatgtgtaatgttgcacatgtcagacaaac 12346006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 306 - 340
Target Start/End: Original strand, 35678418 - 35678452
Alignment:
Q  306 tttaacatgtgcaatgttgcacatgttagacaaac 340  Q
    ||||||||||||||| |||||||||||||||||||    
T  35678418 tttaacatgtgcaatattgcacatgttagacaaac 35678452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 298 - 340
Target Start/End: Complemental strand, 37523800 - 37523758
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaac 340  Q
    |||| |||||||||||||||||| ||| |||||||||||||||    
T  37523800 ttagctgttttaacatgtgcaatattgtacatgttagacaaac 37523758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 197
Target Start/End: Complemental strand, 2161570 - 2161529
Alignment:
Q  156 tatgagtttttctatcatgtgcaaatttgcatattttaagaa 197  Q
    |||| |||||||||||||||||||||||||| || |||||||    
T  2161570 tatgggtttttctatcatgtgcaaatttgcacatgttaagaa 2161529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 198
Target Start/End: Original strand, 7140459 - 7140496
Alignment:
Q  161 gtttttctatcatgtgcaaatttgcatattttaagaag 198  Q
    |||||||||||||||||||||||||| || ||||||||    
T  7140459 gtttttctatcatgtgcaaatttgcacatattaagaag 7140496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 198
Target Start/End: Complemental strand, 10129281 - 10129244
Alignment:
Q  161 gtttttctatcatgtgcaaatttgcatattttaagaag 198  Q
    |||||||||||||||||||||||||| || ||||||||    
T  10129281 gtttttctatcatgtgcaaatttgcacatgttaagaag 10129244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 339
Target Start/End: Original strand, 11947035 - 11947076
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaa 339  Q
    |||||||||||||| |||||||| ||| ||||||||||||||    
T  11947035 ttagttgttttaacttgtgcaatattgtacatgttagacaaa 11947076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 198
Target Start/End: Original strand, 13496709 - 13496746
Alignment:
Q  161 gtttttctatcatgtgcaaatttgcatattttaagaag 198  Q
    |||||||||||||||||||||||||| || ||||||||    
T  13496709 gtttttctatcatgtgcaaatttgcacatgttaagaag 13496746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 198
Target Start/End: Original strand, 18567416 - 18567453
Alignment:
Q  161 gtttttctatcatgtgcaaatttgcatattttaagaag 198  Q
    |||||||||||||||||||||||||| || ||||||||    
T  18567416 gtttttctatcatgtgcaaatttgcacatgttaagaag 18567453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 198
Target Start/End: Complemental strand, 22838403 - 22838366
Alignment:
Q  161 gtttttctatcatgtgcaaatttgcatattttaagaag 198  Q
    |||||||||||||||||||||||||| || ||||||||    
T  22838403 gtttttctatcatgtgcaaatttgcacatgttaagaag 22838366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 198
Target Start/End: Original strand, 27874681 - 27874718
Alignment:
Q  161 gtttttctatcatgtgcaaatttgcatattttaagaag 198  Q
    |||||||||||||||||||||||||| || ||||||||    
T  27874681 gtttttctatcatgtgcaaatttgcacatgttaagaag 27874718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 198
Target Start/End: Original strand, 28014858 - 28014895
Alignment:
Q  161 gtttttctatcatgtgcaaatttgcatattttaagaag 198  Q
    |||||||||||||||||||||||||| || ||||||||    
T  28014858 gtttttctatcatgtgcaaatttgcacatgttaagaag 28014895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 198
Target Start/End: Complemental strand, 31812291 - 31812254
Alignment:
Q  161 gtttttctatcatgtgcaaatttgcatattttaagaag 198  Q
    |||||||||||||||||||||||||| || ||||||||    
T  31812291 gtttttctatcatgtgcaaatttgcacatattaagaag 31812254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 161 - 197
Target Start/End: Original strand, 3306055 - 3306091
Alignment:
Q  161 gtttttctatcatgtgcaaatttgcatattttaagaa 197  Q
    |||||||||||||||||||||||||| || |||||||    
T  3306055 gtttttctatcatgtgcaaatttgcacatgttaagaa 3306091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 162 - 198
Target Start/End: Original strand, 13327942 - 13327978
Alignment:
Q  162 tttttctatcatgtgcaaatttgcatattttaagaag 198  Q
    ||||||||||||||||||||||||| || ||||||||    
T  13327942 tttttctatcatgtgcaaatttgcacatgttaagaag 13327978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 343
Target Start/End: Original strand, 13328085 - 13328121
Alignment:
Q  307 ttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    ||||||| |||||| ||||||||||||||||||||||    
T  13328085 ttaacatatgcaatattgcacatgttagacaaaccct 13328121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 343
Target Start/End: Original strand, 19343981 - 19344017
Alignment:
Q  307 ttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    |||||||||||||| |||||||||| |||||||||||    
T  19343981 ttaacatgtgcaatattgcacatgtaagacaaaccct 19344017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 161 - 197
Target Start/End: Complemental strand, 26682246 - 26682210
Alignment:
Q  161 gtttttctatcatgtgcaaatttgcatattttaagaa 197  Q
    |||||||||||||||||||||||||| || |||||||    
T  26682246 gtttttctatcatgtgcaaatttgcacatgttaagaa 26682210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 311 - 343
Target Start/End: Complemental strand, 26834590 - 26834558
Alignment:
Q  311 catgtgcaatgttgcacatgttagacaaaccct 343  Q
    |||||||||||||||| ||||||||||||||||    
T  26834590 catgtgcaatgttgcatatgttagacaaaccct 26834558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 162 - 198
Target Start/End: Original strand, 28866932 - 28866968
Alignment:
Q  162 tttttctatcatgtgcaaatttgcatattttaagaag 198  Q
    ||||||||||||||||||||||| |||| ||||||||    
T  28866932 tttttctatcatgtgcaaatttgtatatattaagaag 28866968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 161 - 189
Target Start/End: Complemental strand, 29642781 - 29642753
Alignment:
Q  161 gtttttctatcatgtgcaaatttgcatat 189  Q
    |||||||||||||||||||||||||||||    
T  29642781 gtttttctatcatgtgcaaatttgcatat 29642753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 343
Target Start/End: Original strand, 33514645 - 33514681
Alignment:
Q  307 ttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    |||||||||||||| ||||||||||||| ||||||||    
T  33514645 ttaacatgtgcaatattgcacatgttaggcaaaccct 33514681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 339
Target Start/End: Original strand, 39701947 - 39701979
Alignment:
Q  307 ttaacatgtgcaatgttgcacatgttagacaaa 339  Q
    |||||||||||||| ||||||||||||||||||    
T  39701947 ttaacatgtgcaatattgcacatgttagacaaa 39701979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 343
Target Start/End: Original strand, 40210965 - 40211001
Alignment:
Q  307 ttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    ||||||| |||||| ||||||||||||||||||||||    
T  40210965 ttaacatatgcaatattgcacatgttagacaaaccct 40211001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 343
Target Start/End: Complemental strand, 40716308 - 40716272
Alignment:
Q  307 ttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    |||||||||||||| |||||||||||||| |||||||    
T  40716308 ttaacatgtgcaatattgcacatgttagataaaccct 40716272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 4e-17; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 298 - 343
Target Start/End: Complemental strand, 4969815 - 4969770
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  4969815 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 4969770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 298 - 343
Target Start/End: Original strand, 29398250 - 29398295
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  29398250 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 29398295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 298 - 342
Target Start/End: Original strand, 29692676 - 29692720
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 342  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  29692676 ttagttgttttaacatgtgcaatgatgcacatgttagacaaaccc 29692720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 298 - 342
Target Start/End: Complemental strand, 45501501 - 45501457
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 342  Q
    |||||| ||||||||||||||||||||||||||||||||||||||    
T  45501501 ttagttattttaacatgtgcaatgttgcacatgttagacaaaccc 45501457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 298 - 335
Target Start/End: Complemental strand, 39475890 - 39475853
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttaga 335  Q
    ||||||||||||||||||||||||||||||||||||||    
T  39475890 ttagttgttttaacatgtgcaatgttgcacatgttaga 39475853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 298 - 339
Target Start/End: Original strand, 47457597 - 47457638
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaa 339  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  47457597 ttagttgttttaacatgtgcaatattgcacatgttagacaaa 47457638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 298 - 340
Target Start/End: Complemental strand, 19868156 - 19868114
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaac 340  Q
    |||||||| |||||||||||||| |||||||||||||||||||    
T  19868156 ttagttgtcttaacatgtgcaatattgcacatgttagacaaac 19868114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 298 - 343
Target Start/End: Complemental strand, 19889383 - 19889338
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    |||||||  |||||||||||||| ||||||||||||||||||||||    
T  19889383 ttagttgccttaacatgtgcaatattgcacatgttagacaaaccct 19889338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 298 - 338
Target Start/End: Original strand, 820673 - 820713
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaa 338  Q
    ||||||||||||||||| | |||||||||||||||||||||    
T  820673 ttagttgttttaacatgagtaatgttgcacatgttagacaa 820713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 343
Target Start/End: Complemental strand, 9331995 - 9331959
Alignment:
Q  307 ttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    |||||||||||||| ||||||||||||||||||||||    
T  9331995 ttaacatgtgcaatattgcacatgttagacaaaccct 9331959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 343
Target Start/End: Complemental strand, 24250347 - 24250311
Alignment:
Q  307 ttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    |||||||||||||| ||||||||||||||||||||||    
T  24250347 ttaacatgtgcaatattgcacatgttagacaaaccct 24250311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 343
Target Start/End: Complemental strand, 33343022 - 33342986
Alignment:
Q  307 ttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    |||||||||||||| ||||||||||||||||||||||    
T  33343022 ttaacatgtgcaatattgcacatgttagacaaaccct 33342986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 343
Target Start/End: Complemental strand, 34270299 - 34270263
Alignment:
Q  307 ttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    |||||||||||||| ||||||||||||||||||||||    
T  34270299 ttaacatgtgcaatattgcacatgttagacaaaccct 34270263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 305 - 340
Target Start/End: Original strand, 2444049 - 2444084
Alignment:
Q  305 ttttaacatgtgcaatgttgcacatgttagacaaac 340  Q
    ||||||||| ||||||||||||||||||||||||||    
T  2444049 ttttaacatatgcaatgttgcacatgttagacaaac 2444084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 159 - 198
Target Start/End: Complemental strand, 45501639 - 45501600
Alignment:
Q  159 gagtttttctatcatgtgcaaatttgcatattttaagaag 198  Q
    |||||||||||||||||||||||||||| || ||||||||    
T  45501639 gagtttttctatcatgtgcaaatttgcacatcttaagaag 45501600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 307 - 342
Target Start/End: Complemental strand, 46290044 - 46290009
Alignment:
Q  307 ttaacatgtgcaatgttgcacatgttagacaaaccc 342  Q
    |||||||||||||| |||||||||||||||||||||    
T  46290044 ttaacatgtgcaattttgcacatgttagacaaaccc 46290009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 156 - 198
Target Start/End: Original strand, 3561873 - 3561915
Alignment:
Q  156 tatgagtttttctatcatgtgcaaatttgcatattttaagaag 198  Q
    |||| |||||||||||||||||||||||||| || ||||||||    
T  3561873 tatgggtttttctatcatgtgcaaatttgcacatgttaagaag 3561915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 305 - 343
Target Start/End: Complemental strand, 24857535 - 24857497
Alignment:
Q  305 ttttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    ||||| |||||||||| ||||||||||||||||||||||    
T  24857535 ttttatcatgtgcaatattgcacatgttagacaaaccct 24857497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 160 - 198
Target Start/End: Original strand, 25709398 - 25709436
Alignment:
Q  160 agtttttctatcatgtgcaaatttgcatattttaagaag 198  Q
    ||||||||||||||||||||||||||| || ||||||||    
T  25709398 agtttttctatcatgtgcaaatttgcacatgttaagaag 25709436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 298 - 340
Target Start/End: Complemental strand, 26300615 - 26300573
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaac 340  Q
    |||||||||||||||| |||||| || ||||||||||||||||    
T  26300615 ttagttgttttaacatatgcaatattacacatgttagacaaac 26300573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 156 - 198
Target Start/End: Original strand, 39757105 - 39757147
Alignment:
Q  156 tatgagtttttctatcatgtgcaaatttgcatattttaagaag 198  Q
    |||| |||||||||||||||||||||||||| || ||||||||    
T  39757105 tatgggtttttctatcatgtgcaaatttgcacatgttaagaag 39757147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 308 - 342
Target Start/End: Original strand, 47120339 - 47120373
Alignment:
Q  308 taacatgtgcaatgttgcacatgttagacaaaccc 342  Q
    ||||||||||||| |||||||||||||||||||||    
T  47120339 taacatgtgcaatattgcacatgttagacaaaccc 47120373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 198
Target Start/End: Original strand, 820541 - 820578
Alignment:
Q  161 gtttttctatcatgtgcaaatttgcatattttaagaag 198  Q
    |||||||||||||||||||||||||| || ||||||||    
T  820541 gtttttctatcatgtgcaaatttgcacatgttaagaag 820578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 198
Target Start/End: Complemental strand, 4969951 - 4969914
Alignment:
Q  161 gtttttctatcatgtgcaaatttgcatattttaagaag 198  Q
    |||||||||||||||||||||||||| || ||||||||    
T  4969951 gtttttctatcatgtgcaaatttgcacatgttaagaag 4969914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 343
Target Start/End: Original strand, 5909417 - 5909462
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    |||||||  |||||||||||||| ||||||||||||| ||||||||    
T  5909417 ttagttgccttaacatgtgcaatattgcacatgttagtcaaaccct 5909462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 343
Target Start/End: Complemental strand, 7170045 - 7170000
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    |||||||  |||||||||||||| ||||||||||||||||| ||||    
T  7170045 ttagttgccttaacatgtgcaatattgcacatgttagacaatccct 7170000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 198
Target Start/End: Complemental strand, 9332139 - 9332102
Alignment:
Q  161 gtttttctatcatgtgcaaatttgcatattttaagaag 198  Q
    |||||||||||||||||||||||||| || ||||||||    
T  9332139 gtttttctatcatgtgcaaatttgcacatgttaagaag 9332102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 342
Target Start/End: Complemental strand, 27696746 - 27696705
Alignment:
Q  301 gttgttttaacatgtgcaatgttgcacatgttagacaaaccc 342  Q
    |||| ||||||||||||||| || ||||||||||||||||||    
T  27696746 gttgctttaacatgtgcaatattccacatgttagacaaaccc 27696705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 307 - 340
Target Start/End: Original strand, 39757254 - 39757287
Alignment:
Q  307 ttaacatgtgcaatgttgcacatgttagacaaac 340  Q
    |||||||||||||| |||||||||||||||||||    
T  39757254 ttaacatgtgcaatattgcacatgttagacaaac 39757287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 343
Target Start/End: Complemental strand, 39869157 - 39869120
Alignment:
Q  306 tttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    ||||||||||||||| ||||| ||||||||||||||||    
T  39869157 tttaacatgtgcaatattgcatatgttagacaaaccct 39869120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 339
Target Start/End: Original strand, 3562022 - 3562054
Alignment:
Q  307 ttaacatgtgcaatgttgcacatgttagacaaa 339  Q
    |||||||||||||| ||||||||||||||||||    
T  3562022 ttaacatgtgcaatattgcacatgttagacaaa 3562054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 343
Target Start/End: Complemental strand, 32117848 - 32117812
Alignment:
Q  307 ttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    |||||||||||||| |||||||||||||| |||||||    
T  32117848 ttaacatgtgcaatattgcacatgttagataaaccct 32117812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 161 - 197
Target Start/End: Complemental strand, 32117992 - 32117956
Alignment:
Q  161 gtttttctatcatgtgcaaatttgcatattttaagaa 197  Q
    |||||||||||||||||||||||||| || |||||||    
T  32117992 gtttttctatcatgtgcaaatttgcacatgttaagaa 32117956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 161 - 197
Target Start/End: Complemental strand, 33343166 - 33343130
Alignment:
Q  161 gtttttctatcatgtgcaaatttgcatattttaagaa 197  Q
    |||||||||||||||||||||||||| || |||||||    
T  33343166 gtttttctatcatgtgcaaatttgcacatgttaagaa 33343130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 161 - 197
Target Start/End: Complemental strand, 34270439 - 34270403
Alignment:
Q  161 gtttttctatcatgtgcaaatttgcatattttaagaa 197  Q
    |||||||||||||||||||||||||| || |||||||    
T  34270439 gtttttctatcatgtgcaaatttgcacatgttaagaa 34270403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 339
Target Start/End: Original strand, 36548604 - 36548636
Alignment:
Q  307 ttaacatgtgcaatgttgcacatgttagacaaa 339  Q
    |||||||||||||| ||||||||||||||||||    
T  36548604 ttaacatgtgcaatattgcacatgttagacaaa 36548636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 161 - 197
Target Start/End: Complemental strand, 46290188 - 46290152
Alignment:
Q  161 gtttttctatcatgtgcaaatttgcatattttaagaa 197  Q
    |||||||||||||||||||||||||| || |||||||    
T  46290188 gtttttctatcatgtgcaaatttgcacatgttaagaa 46290152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 4e-17; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 298 - 343
Target Start/End: Original strand, 24979285 - 24979330
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  24979285 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 24979330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 298 - 342
Target Start/End: Complemental strand, 34692396 - 34692352
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 342  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  34692396 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 34692352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 298 - 343
Target Start/End: Complemental strand, 30623368 - 30623323
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||    
T  30623368 ttagttgttttaacatgtgtaatgttgcacatgttagacaaaccct 30623323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 307 - 343
Target Start/End: Original strand, 18332833 - 18332869
Alignment:
Q  307 ttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    |||||||||||||||||||||||||||||||||||||    
T  18332833 ttaacatgtgcaatgttgcacatgttagacaaaccct 18332869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 298 - 341
Target Start/End: Original strand, 1814917 - 1814960
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaacc 341  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||    
T  1814917 ttagttgctttaacatgtgcaatattgcacatgttagacaaacc 1814960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 298 - 339
Target Start/End: Complemental strand, 4371881 - 4371840
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaa 339  Q
    |||||||||||||||||| ||||||||||||| |||||||||    
T  4371881 ttagttgttttaacatgtacaatgttgcacatattagacaaa 4371840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 298 - 343
Target Start/End: Complemental strand, 6016898 - 6016853
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    |||| ||| ||| |||||||||||||||||||||||||||||||||    
T  6016898 ttagatgtcttaccatgtgcaatgttgcacatgttagacaaaccct 6016853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 298 - 343
Target Start/End: Complemental strand, 17596355 - 17596310
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    |||||||| |||||||||||||| ||||||||||||||||| ||||    
T  17596355 ttagttgtcttaacatgtgcaatattgcacatgttagacaatccct 17596310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 306 - 343
Target Start/End: Original strand, 29863446 - 29863483
Alignment:
Q  306 tttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  29863446 tttaacatgtgcaatattgcacatgttagacaaaccct 29863483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 306 - 343
Target Start/End: Original strand, 31791060 - 31791097
Alignment:
Q  306 tttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  31791060 tttaacatgtgcaatattgcacatgttagacaaaccct 31791097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 343
Target Start/End: Original strand, 14228270 - 14228306
Alignment:
Q  307 ttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    |||||||||||||| ||||||||||||||||||||||    
T  14228270 ttaacatgtgcaatattgcacatgttagacaaaccct 14228306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 343
Target Start/End: Original strand, 17552731 - 17552767
Alignment:
Q  307 ttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    |||||||||||||| ||||||||||||||||||||||    
T  17552731 ttaacatgtgcaatattgcacatgttagacaaaccct 17552767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 343
Target Start/End: Complemental strand, 33017758 - 33017722
Alignment:
Q  307 ttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    |||||||||||||| ||||||||||||||||||||||    
T  33017758 ttaacatgtgcaatattgcacatgttagacaaaccct 33017722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 307 - 342
Target Start/End: Original strand, 8977611 - 8977646
Alignment:
Q  307 ttaacatgtgcaatgttgcacatgttagacaaaccc 342  Q
    |||||||||||||| |||||||||||||||||||||    
T  8977611 ttaacatgtgcaatattgcacatgttagacaaaccc 8977646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 307 - 338
Target Start/End: Complemental strand, 10887062 - 10887031
Alignment:
Q  307 ttaacatgtgcaatgttgcacatgttagacaa 338  Q
    ||||||||||||||||||||||||||||||||    
T  10887062 ttaacatgtgcaatgttgcacatgttagacaa 10887031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 159 - 198
Target Start/End: Complemental strand, 10887209 - 10887170
Alignment:
Q  159 gagtttttctatcatgtgcaaatttgcatattttaagaag 198  Q
    |||||||||||||||||||||||||||| || ||||||||    
T  10887209 gagtttttctatcatgtgcaaatttgcacatgttaagaag 10887170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 307 - 342
Target Start/End: Original strand, 28943913 - 28943948
Alignment:
Q  307 ttaacatgtgcaatgttgcacatgttagacaaaccc 342  Q
    |||||||||||||| |||||||||||||||||||||    
T  28943913 ttaacatgtgcaatattgcacatgttagacaaaccc 28943948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 307 - 341
Target Start/End: Original strand, 5363037 - 5363071
Alignment:
Q  307 ttaacatgtgcaatgttgcacatgttagacaaacc 341  Q
    |||||||||||||| ||||||||||||||||||||    
T  5363037 ttaacatgtgcaatattgcacatgttagacaaacc 5363071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 156 - 198
Target Start/End: Complemental strand, 34692537 - 34692495
Alignment:
Q  156 tatgagtttttctatcatgtgcaaatttgcatattttaagaag 198  Q
    |||| |||||||||||||||||||||||||| || ||||||||    
T  34692537 tatgggtttttctatcatgtgcaaatttgcacatgttaagaag 34692495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 341
Target Start/End: Original strand, 2086999 - 2087032
Alignment:
Q  308 taacatgtgcaatgttgcacatgttagacaaacc 341  Q
    ||||||||||||| ||||||||||||||||||||    
T  2086999 taacatgtgcaatattgcacatgttagacaaacc 2087032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 198
Target Start/End: Original strand, 29863302 - 29863339
Alignment:
Q  161 gtttttctatcatgtgcaaatttgcatattttaagaag 198  Q
    |||||||||||||||||||||||||| || ||||||||    
T  29863302 gtttttctatcatgtgcaaatttgcacatgttaagaag 29863339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 161 - 197
Target Start/End: Complemental strand, 3853121 - 3853085
Alignment:
Q  161 gtttttctatcatgtgcaaatttgcatattttaagaa 197  Q
    |||||||||||||||||||||||||| || |||||||    
T  3853121 gtttttctatcatgtgcaaatttgcacatgttaagaa 3853085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 306 - 342
Target Start/End: Original strand, 10345683 - 10345719
Alignment:
Q  306 tttaacatgtgcaatgttgcacatgttagacaaaccc 342  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  10345683 tttaacatgtgcaatattgcacatgttagacagaccc 10345719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 306 - 342
Target Start/End: Complemental strand, 12220584 - 12220548
Alignment:
Q  306 tttaacatgtgcaatgttgcacatgttagacaaaccc 342  Q
    ||||||||||||||||||||| ||| |||||||||||    
T  12220584 tttaacatgtgcaatgttgcaaatgctagacaaaccc 12220548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 161 - 197
Target Start/End: Original strand, 14228126 - 14228162
Alignment:
Q  161 gtttttctatcatgtgcaaatttgcatattttaagaa 197  Q
    |||||||||||||||||||||||||| || |||||||    
T  14228126 gtttttctatcatgtgcaaatttgcacatgttaagaa 14228162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 161 - 197
Target Start/End: Original strand, 17552587 - 17552623
Alignment:
Q  161 gtttttctatcatgtgcaaatttgcatattttaagaa 197  Q
    |||||||||||||||||||||||||| || |||||||    
T  17552587 gtttttctatcatgtgcaaatttgcacatgttaagaa 17552623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 343
Target Start/End: Original strand, 26602575 - 26602611
Alignment:
Q  307 ttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    |||| ||||||||| ||||||||||||||||||||||    
T  26602575 ttaatatgtgcaatattgcacatgttagacaaaccct 26602611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 161 - 197
Target Start/End: Original strand, 28943769 - 28943805
Alignment:
Q  161 gtttttctatcatgtgcaaatttgcatattttaagaa 197  Q
    |||||||||||||||||||||||||| || |||||||    
T  28943769 gtttttctatcatgtgcaaatttgcacatgttaagaa 28943805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 343
Target Start/End: Complemental strand, 31568146 - 31568110
Alignment:
Q  307 ttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    |||||||||||||| |||||| |||||||||||||||    
T  31568146 ttaacatgtgcaatattgcacgtgttagacaaaccct 31568110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 4e-17; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 298 - 343
Target Start/End: Complemental strand, 45742410 - 45742365
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  45742410 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 45742365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 298 - 342
Target Start/End: Complemental strand, 17409866 - 17409822
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 342  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  17409866 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 17409822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 298 - 342
Target Start/End: Complemental strand, 23545518 - 23545474
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 342  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  23545518 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 23545474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 298 - 341
Target Start/End: Complemental strand, 19468236 - 19468193
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaacc 341  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  19468236 ttagttgttttaacatgtgcaatgttgcacatgttagacaaacc 19468193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 298 - 343
Target Start/End: Original strand, 19451036 - 19451081
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  19451036 ttagttgttttaacatgtgcaatgttgcacatgttagacaacccct 19451081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 298 - 343
Target Start/End: Complemental strand, 27019302 - 27019257
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||    
T  27019302 ttagttgttttaacatgtgcaatgttgcacacgttagacaaaccct 27019257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 302 - 342
Target Start/End: Complemental strand, 3085390 - 3085350
Alignment:
Q  302 ttgttttaacatgtgcaatgttgcacatgttagacaaaccc 342  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  3085390 ttgttttaacatgtgcaatgttgcacatgttagacaaaccc 3085350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 298 - 343
Target Start/End: Original strand, 8736946 - 8736991
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||    
T  8736946 ttagatgtcttaacatgtgcaatgttgcacatgttagacaaaccct 8736991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 298 - 343
Target Start/End: Original strand, 16667520 - 16667565
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||    
T  16667520 ttagatgtcttaacatgtgcaatgttgcacatgttagacaaaccct 16667565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 298 - 339
Target Start/End: Original strand, 19838825 - 19838866
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaa 339  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  19838825 ttagttgttttaacatgtgcaatgttccacatgttagacaaa 19838866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 307 - 343
Target Start/End: Original strand, 54495782 - 54495818
Alignment:
Q  307 ttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    |||||||||||||||||||||||||||||||||||||    
T  54495782 ttaacatgtgcaatgttgcacatgttagacaaaccct 54495818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 198
Target Start/End: Original strand, 4779431 - 4779473
Alignment:
Q  156 tatgagtttttctatcatgtgcaaatttgcatattttaagaag 198  Q
    ||||||||||||||||||||||||||||||| || ||||||||    
T  4779431 tatgagtttttctatcatgtgcaaatttgcacatgttaagaag 4779473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 298 - 340
Target Start/End: Complemental strand, 6875543 - 6875501
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaac 340  Q
    ||||||||||||||||||||||| ||||| |||||||||||||    
T  6875543 ttagttgttttaacatgtgcaatattgcaaatgttagacaaac 6875501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 340
Target Start/End: Original strand, 24243029 - 24243067
Alignment:
Q  302 ttgttttaacatgtgcaatgttgcacatgttagacaaac 340  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  24243029 ttgttttaacatgtgtaatgttgcacatgttagacaaac 24243067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 198
Target Start/End: Original strand, 47326887 - 47326929
Alignment:
Q  156 tatgagtttttctatcatgtgcaaatttgcatattttaagaag 198  Q
    ||||||||||||||||||||||||||||||| || ||||||||    
T  47326887 tatgagtttttctatcatgtgcaaatttgcacatgttaagaag 47326929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 198
Target Start/End: Original strand, 47341683 - 47341725
Alignment:
Q  156 tatgagtttttctatcatgtgcaaatttgcatattttaagaag 198  Q
    ||||||||||||||||||||||||||||||| || ||||||||    
T  47341683 tatgagtttttctatcatgtgcaaatttgcacatgttaagaag 47341725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 161 - 198
Target Start/End: Complemental strand, 3085848 - 3085811
Alignment:
Q  161 gtttttctatcatgtgcaaatttgcatattttaagaag 198  Q
    |||||||||||||||||||||||||| |||||||||||    
T  3085848 gtttttctatcatgtgcaaatttgcacattttaagaag 3085811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 298 - 343
Target Start/End: Original strand, 9971700 - 9971745
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    ||||||| | ||||||||||||| ||||||||||||||||||||||    
T  9971700 ttagttgctgtaacatgtgcaatattgcacatgttagacaaaccct 9971745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 302 - 343
Target Start/End: Original strand, 31955898 - 31955939
Alignment:
Q  302 ttgttttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    |||||||||||||| |||||||| ||||||||||||||||||    
T  31955898 ttgttttaacatgttcaatgttggacatgttagacaaaccct 31955939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 298 - 343
Target Start/End: Original strand, 47327028 - 47327073
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    |||| ||| |||||||||||||||||||||| ||||||||||||||    
T  47327028 ttagatgtcttaacatgtgcaatgttgcacaggttagacaaaccct 47327073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 298 - 343
Target Start/End: Original strand, 47341824 - 47341869
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    |||| ||| |||||||||||||||||||||| ||||||||||||||    
T  47341824 ttagatgtcttaacatgtgcaatgttgcacaggttagacaaaccct 47341869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 298 - 339
Target Start/End: Complemental strand, 51691384 - 51691343
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaa 339  Q
    ||||||| |||||||||||||||||||||||| |||||||||    
T  51691384 ttagttgctttaacatgtgcaatgttgcacattttagacaaa 51691343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 298 - 342
Target Start/End: Complemental strand, 2096913 - 2096869
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 342  Q
    ||||||| |||||| |||||||| |||||||||||||||||||||    
T  2096913 ttagttgatttaacttgtgcaatattgcacatgttagacaaaccc 2096869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 298 - 342
Target Start/End: Complemental strand, 24684878 - 24684834
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 342  Q
    ||||||||||||||||||| ||||||||| |||||| ||||||||    
T  24684878 ttagttgttttaacatgtgtaatgttgcaaatgttaaacaaaccc 24684834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 342
Target Start/End: Complemental strand, 40049593 - 40049557
Alignment:
Q  306 tttaacatgtgcaatgttgcacatgttagacaaaccc 342  Q
    ||||||||||||||| |||||||||||||||||||||    
T  40049593 tttaacatgtgcaatattgcacatgttagacaaaccc 40049557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 298 - 342
Target Start/End: Original strand, 48910970 - 48911014
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 342  Q
    |||||| | |||||||||||||| |||||||||||||||||||||    
T  48910970 ttagttatcttaacatgtgcaatattgcacatgttagacaaaccc 48911014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 343
Target Start/End: Complemental strand, 50352336 - 50352300
Alignment:
Q  307 ttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    |||||||||||||| ||||||||||||||||||||||    
T  50352336 ttaacatgtgcaatattgcacatgttagacaaaccct 50352300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 301 - 343
Target Start/End: Complemental strand, 3726976 - 3726934
Alignment:
Q  301 gttgttttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    ||||| |||||||||||||| |||||||||| |||||||||||    
T  3726976 gttgtgttaacatgtgcaatattgcacatgtaagacaaaccct 3726934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 307 - 341
Target Start/End: Original strand, 9759286 - 9759320
Alignment:
Q  307 ttaacatgtgcaatgttgcacatgttagacaaacc 341  Q
    |||||||||||||| ||||||||||||||||||||    
T  9759286 ttaacatgtgcaatattgcacatgttagacaaacc 9759320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 305 - 339
Target Start/End: Original strand, 16069348 - 16069382
Alignment:
Q  305 ttttaacatgtgcaatgttgcacatgttagacaaa 339  Q
    ||||||| |||||||||||||||||||||||||||    
T  16069348 ttttaacgtgtgcaatgttgcacatgttagacaaa 16069382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 156 - 198
Target Start/End: Original strand, 35999942 - 35999984
Alignment:
Q  156 tatgagtttttctatcatgtgcaaatttgcatattttaagaag 198  Q
    |||| |||||||||||||||||||||||||| || ||||||||    
T  35999942 tatgggtttttctatcatgtgcaaatttgcacatgttaagaag 35999984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 156 - 186
Target Start/End: Complemental strand, 46803982 - 46803952
Alignment:
Q  156 tatgagtttttctatcatgtgcaaatttgca 186  Q
    |||||||||||||||||||||||||||||||    
T  46803982 tatgagtttttctatcatgtgcaaatttgca 46803952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 194
Target Start/End: Complemental strand, 4329772 - 4329739
Alignment:
Q  161 gtttttctatcatgtgcaaatttgcatattttaa 194  Q
    ||||||||||||||||||||||||||||| ||||    
T  4329772 gtttttctatcatgtgcaaatttgcatatgttaa 4329739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 343
Target Start/End: Complemental strand, 7349731 - 7349686
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    |||||||  |||||||||||||| |||||| |||||||||||||||    
T  7349731 ttagttgccttaacatgtgcaatattgcacgtgttagacaaaccct 7349686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 198
Target Start/End: Original strand, 18882267 - 18882304
Alignment:
Q  161 gtttttctatcatgtgcaaatttgcatattttaagaag 198  Q
    |||||||||||||||||||||||||| || ||||||||    
T  18882267 gtttttctatcatgtgcaaatttgcacatgttaagaag 18882304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 194
Target Start/End: Complemental strand, 27019438 - 27019405
Alignment:
Q  161 gtttttctatcatgtgcaaatttgcatattttaa 194  Q
    ||||||||||||||||||||||||||||| ||||    
T  27019438 gtttttctatcatgtgcaaatttgcatatgttaa 27019405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 198
Target Start/End: Complemental strand, 27362569 - 27362532
Alignment:
Q  161 gtttttctatcatgtgcaaatttgcatattttaagaag 198  Q
    |||||||||||||||||||||||||| || ||||||||    
T  27362569 gtttttctatcatgtgcaaatttgcacatgttaagaag 27362532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 198
Target Start/End: Original strand, 29190816 - 29190853
Alignment:
Q  161 gtttttctatcatgtgcaaatttgcatattttaagaag 198  Q
    |||||||||||||||||||||||||| || ||||||||    
T  29190816 gtttttctatcatgtgcaaatttgcacatgttaagaag 29190853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 339
Target Start/End: Original strand, 33632338 - 33632379
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaa 339  Q
    ||||||||||| ||||||  ||||||||||||||||||||||    
T  33632338 ttagttgtttttacatgtataatgttgcacatgttagacaaa 33632379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 339
Target Start/End: Original strand, 53376549 - 53376590
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaa 339  Q
    |||||| |||||||||||||||| |||||||| |||||||||    
T  53376549 ttagttcttttaacatgtgcaatattgcacatcttagacaaa 53376590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 198
Target Start/End: Original strand, 54495637 - 54495674
Alignment:
Q  161 gtttttctatcatgtgcaaatttgcatattttaagaag 198  Q
    |||||||||||||||||||||||||| || ||||||||    
T  54495637 gtttttctatcatgtgcaaatttgcacatgttaagaag 54495674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 162 - 198
Target Start/End: Original strand, 16667385 - 16667421
Alignment:
Q  162 tttttctatcatgtgcaaatttgcatattttaagaag 198  Q
    ||||||||||||||||||||||||| || ||||||||    
T  16667385 tttttctatcatgtgcaaatttgcacatgttaagaag 16667421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 339
Target Start/End: Complemental strand, 23553603 - 23553571
Alignment:
Q  307 ttaacatgtgcaatgttgcacatgttagacaaa 339  Q
    |||||||||||||| ||||||||||||||||||    
T  23553603 ttaacatgtgcaatattgcacatgttagacaaa 23553571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 162 - 198
Target Start/End: Original strand, 48910803 - 48910839
Alignment:
Q  162 tttttctatcatgtgcaaatttgcatattttaagaag 198  Q
    |||||||||||| ||||||||||||||| ||||||||    
T  48910803 tttttctatcatatgcaaatttgcatatgttaagaag 48910839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 343
Target Start/End: Complemental strand, 49228390 - 49228354
Alignment:
Q  307 ttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    ||||||| |||||| ||||||||||||||||||||||    
T  49228390 ttaacatatgcaatattgcacatgttagacaaaccct 49228354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 343
Target Start/End: Complemental strand, 49332366 - 49332330
Alignment:
Q  307 ttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    |||||||||| ||| ||||||||||||||||||||||    
T  49332366 ttaacatgtgaaatattgcacatgttagacaaaccct 49332330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 4e-17; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 298 - 343
Target Start/End: Complemental strand, 50204445 - 50204400
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  50204445 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 50204400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 298 - 342
Target Start/End: Complemental strand, 42180094 - 42180050
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 342  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  42180094 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 42180050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 298 - 340
Target Start/End: Original strand, 54527842 - 54527884
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaac 340  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  54527842 ttagttgttttaacatgtgcaatgttgcacatgttagacaaac 54527884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 298 - 343
Target Start/End: Complemental strand, 8165688 - 8165643
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  8165688 ttagttgttttaaaatgtgcaatgttgcacatgttagacaaaccct 8165643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 292 - 341
Target Start/End: Complemental strand, 24087032 - 24086983
Alignment:
Q  292 ctacggttagttgttttaacatgtgcaatgttgcacatgttagacaaacc 341  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  24087032 ctactgttagttgttttaagatgtgcaatgttgcacatgttagacaaacc 24086983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 298 - 343
Target Start/End: Original strand, 51567954 - 51567999
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    |||||||||||||||||||||||||||| |||||||||||||||||    
T  51567954 ttagttgttttaacatgtgcaatgttgcgcatgttagacaaaccct 51567999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 298 - 342
Target Start/End: Complemental strand, 51618092 - 51618048
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 342  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  51618092 ttagttgttttaacatgtgcaatattgcacatgttagacaaaccc 51618048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 298 - 341
Target Start/End: Complemental strand, 27549580 - 27549537
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaacc 341  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  27549580 ttagttgttttaacatgtgcaatgttgcacatattagacaaacc 27549537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 305 - 343
Target Start/End: Complemental strand, 51400203 - 51400165
Alignment:
Q  305 ttttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    |||||||||||||||||||||||||||||||||||||||    
T  51400203 ttttaacatgtgcaatgttgcacatgttagacaaaccct 51400165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 298 - 333
Target Start/End: Original strand, 8497559 - 8497594
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgtta 333  Q
    ||||||||||||||||||||||||||||||||||||    
T  8497559 ttagttgttttaacatgtgcaatgttgcacatgtta 8497594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 307 - 342
Target Start/End: Complemental strand, 38389480 - 38389445
Alignment:
Q  307 ttaacatgtgcaatgttgcacatgttagacaaaccc 342  Q
    ||||||||||||||||||||||||||||||||||||    
T  38389480 ttaacatgtgcaatgttgcacatgttagacaaaccc 38389445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 301 - 343
Target Start/End: Complemental strand, 26499609 - 26499567
Alignment:
Q  301 gttgttttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    ||||||||||||| ||||||||||||||||||||| |||||||    
T  26499609 gttgttttaacatatgcaatgttgcacatgttagataaaccct 26499567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 198
Target Start/End: Original strand, 33474468 - 33474510
Alignment:
Q  156 tatgagtttttctatcatgtgcaaatttgcatattttaagaag 198  Q
    ||||||||||||||||||||||||||||||| || ||||||||    
T  33474468 tatgagtttttctatcatgtgcaaatttgcacatgttaagaag 33474510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 298 - 343
Target Start/End: Complemental strand, 11610957 - 11610912
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    |||||||  |||||||||||||| ||||||||||||||||||||||    
T  11610957 ttagttgccttaacatgtgcaatattgcacatgttagacaaaccct 11610912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 302 - 343
Target Start/End: Complemental strand, 40930095 - 40930054
Alignment:
Q  302 ttgttttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    ||||||||||||||||||| |||| |||||||||||||||||    
T  40930095 ttgttttaacatgtgcaattttgcgcatgttagacaaaccct 40930054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 343
Target Start/End: Complemental strand, 3863363 - 3863327
Alignment:
Q  307 ttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    |||||||||||||| ||||||||||||||||||||||    
T  3863363 ttaacatgtgcaatattgcacatgttagacaaaccct 3863327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 307 - 342
Target Start/End: Complemental strand, 2571302 - 2571267
Alignment:
Q  307 ttaacatgtgcaatgttgcacatgttagacaaaccc 342  Q
    |||||||||||||| |||||||||||||||||||||    
T  2571302 ttaacatgtgcaatattgcacatgttagacaaaccc 2571267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 307 - 342
Target Start/End: Original strand, 12515618 - 12515653
Alignment:
Q  307 ttaacatgtgcaatgttgcacatgttagacaaaccc 342  Q
    |||||||||||||| |||||||||||||||||||||    
T  12515618 ttaacatgtgcaatattgcacatgttagacaaaccc 12515653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 301 - 340
Target Start/End: Original strand, 15664992 - 15665031
Alignment:
Q  301 gttgttttaacatgtgcaatgttgcacatgttagacaaac 340  Q
    |||||||||||| |||| ||||||||||||||||||||||    
T  15664992 gttgttttaacacgtgctatgttgcacatgttagacaaac 15665031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 306 - 341
Target Start/End: Original strand, 39365275 - 39365310
Alignment:
Q  306 tttaacatgtgcaatgttgcacatgttagacaaacc 341  Q
    ||||||||||||||| ||||||||||||||||||||    
T  39365275 tttaacatgtgcaatattgcacatgttagacaaacc 39365310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 298 - 340
Target Start/End: Original strand, 35415157 - 35415199
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaac 340  Q
    |||||||||||||||||||||||  ||||||||||||| ||||    
T  35415157 ttagttgttttaacatgtgcaataatgcacatgttagataaac 35415199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 305 - 343
Target Start/End: Original strand, 36426554 - 36426592
Alignment:
Q  305 ttttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    |||||||||||||||||||||||||| |||| |||||||    
T  36426554 ttttaacatgtgcaatgttgcacatgatagaaaaaccct 36426592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 160 - 198
Target Start/End: Complemental strand, 40930230 - 40930192
Alignment:
Q  160 agtttttctatcatgtgcaaatttgcatattttaagaag 198  Q
    ||||||||||||||||||||||||||| || ||||||||    
T  40930230 agtttttctatcatgtgcaaatttgcacatgttaagaag 40930192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 331
Target Start/End: Original strand, 2379205 - 2379238
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgt 331  Q
    ||||||||||||||||||||||| ||||||||||    
T  2379205 ttagttgttttaacatgtgcaatattgcacatgt 2379238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 198
Target Start/End: Complemental strand, 3863507 - 3863470
Alignment:
Q  161 gtttttctatcatgtgcaaatttgcatattttaagaag 198  Q
    |||||||||||||||||||||||||| || ||||||||    
T  3863507 gtttttctatcatgtgcaaatttgcacatgttaagaag 3863470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 307 - 340
Target Start/End: Complemental strand, 20938090 - 20938057
Alignment:
Q  307 ttaacatgtgcaatgttgcacatgttagacaaac 340  Q
    |||||||||||||| |||||||||||||||||||    
T  20938090 ttaacatgtgcaatattgcacatgttagacaaac 20938057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 186
Target Start/End: Complemental strand, 20938239 - 20938210
Alignment:
Q  157 atgagtttttctatcatgtgcaaatttgca 186  Q
    ||||||||||||||||||||||||||||||    
T  20938239 atgagtttttctatcatgtgcaaatttgca 20938210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 198
Target Start/End: Complemental strand, 23523124 - 23523087
Alignment:
Q  161 gtttttctatcatgtgcaaatttgcatattttaagaag 198  Q
    |||||||||||||||||||||||||| || ||||||||    
T  23523124 gtttttctatcatgtgcaaatttgcacatgttaagaag 23523087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 343
Target Start/End: Complemental strand, 37444189 - 37444144
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    |||||||  |||||||||||||| ||||||||||||||||| ||||    
T  37444189 ttagttgccttaacatgtgcaatattgcacatgttagacaatccct 37444144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 198
Target Start/End: Complemental strand, 38389625 - 38389588
Alignment:
Q  161 gtttttctatcatgtgcaaatttgcatattttaagaag 198  Q
    |||||||||||||||||||||||||| || ||||||||    
T  38389625 gtttttctatcatgtgcaaatttgcacatgttaagaag 38389588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 343
Target Start/End: Complemental strand, 47386964 - 47386919
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    ||||||| ||||| ||| ||||| ||||||||||||||||||||||    
T  47386964 ttagttgctttaatatgcgcaatattgcacatgttagacaaaccct 47386919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 198
Target Start/End: Complemental strand, 50204581 - 50204544
Alignment:
Q  161 gtttttctatcatgtgcaaatttgcatattttaagaag 198  Q
    |||||||||||||||||||||||||| || ||||||||    
T  50204581 gtttttctatcatgtgcaaatttgcacatgttaagaag 50204544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 198
Target Start/End: Complemental strand, 51618225 - 51618188
Alignment:
Q  161 gtttttctatcatgtgcaaatttgcatattttaagaag 198  Q
    |||||||||||||||||||||||||| || ||||||||    
T  51618225 gtttttctatcatgtgcaaatttgcacatgttaagaag 51618188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 161 - 197
Target Start/End: Complemental strand, 2571446 - 2571410
Alignment:
Q  161 gtttttctatcatgtgcaaatttgcatattttaagaa 197  Q
    |||||||||||||||||||||||||| || |||||||    
T  2571446 gtttttctatcatgtgcaaatttgcacatgttaagaa 2571410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 162 - 198
Target Start/End: Complemental strand, 8165823 - 8165787
Alignment:
Q  162 tttttctatcatgtgcaaatttgcatattttaagaag 198  Q
    ||||||||||||||||||||||||| || ||||||||    
T  8165823 tttttctatcatgtgcaaatttgcacatgttaagaag 8165787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 161 - 197
Target Start/End: Complemental strand, 10307944 - 10307908
Alignment:
Q  161 gtttttctatcatgtgcaaatttgcatattttaagaa 197  Q
    |||||||||||||||||||||||||| || |||||||    
T  10307944 gtttttctatcatgtgcaaatttgcacatgttaagaa 10307908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 343
Target Start/End: Complemental strand, 13495327 - 13495291
Alignment:
Q  307 ttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    |||||||||||||  ||||||||||||||||||||||    
T  13495327 ttaacatgtgcaaatttgcacatgttagacaaaccct 13495291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 302 - 343
Target Start/End: Original strand, 28992917 - 28992960
Alignment:
Q  302 ttgttttaacatgtgcaatgt--tgcacatgttagacaaaccct 343  Q
    ||||||||||||||||||| |  |||||||||||||||||||||    
T  28992917 ttgttttaacatgtgcaatatattgcacatgttagacaaaccct 28992960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 158 - 198
Target Start/End: Original strand, 35414806 - 35414846
Alignment:
Q  158 tgagtttttctatcatgtgcaaatttgcatattttaagaag 198  Q
    |||||||||||||||||||||||||| || || ||||||||    
T  35414806 tgagtttttctatcatgtgcaaatttacacatgttaagaag 35414846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 298 - 342
Target Start/End: Original strand, 46845576 - 46845620
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 342  Q
    ||||||| ||||| ||||||||| |||||||| ||||||||||||    
T  46845576 ttagttgctttaagatgtgcaatattgcacatattagacaaaccc 46845620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 339
Target Start/End: Original strand, 51339328 - 51339360
Alignment:
Q  307 ttaacatgtgcaatgttgcacatgttagacaaa 339  Q
    |||||||||||||| ||||||||||||||||||    
T  51339328 ttaacatgtgcaatattgcacatgttagacaaa 51339360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 162 - 194
Target Start/End: Original strand, 54016169 - 54016201
Alignment:
Q  162 tttttctatcatgtgcaaatttgcatattttaa 194  Q
    ||||||||||||||||||||||||| |||||||    
T  54016169 tttttctatcatgtgcaaatttgcacattttaa 54016201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 4e-17; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 298 - 343
Target Start/End: Original strand, 3168204 - 3168249
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  3168204 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 3168249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 298 - 342
Target Start/End: Complemental strand, 6180228 - 6180184
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 342  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  6180228 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 6180184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 298 - 342
Target Start/End: Original strand, 7824994 - 7825038
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 342  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  7824994 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 7825038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 298 - 343
Target Start/End: Complemental strand, 13321918 - 13321873
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  13321918 ttagttgttttaacatgtacaatgttgcacatgttagacaaaccct 13321873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 298 - 343
Target Start/End: Complemental strand, 23591740 - 23591695
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||    
T  23591740 ttagttgctttaacatgtgcaatgttgcacatgttagacaaaccct 23591695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 298 - 342
Target Start/End: Complemental strand, 22167377 - 22167333
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 342  Q
    ||||||||||||||||||||||||||||||||| |||||||||||    
T  22167377 ttagttgttttaacatgtgcaatgttgcacatggtagacaaaccc 22167333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 298 - 342
Target Start/End: Complemental strand, 35512767 - 35512723
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 342  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  35512767 ttagttgttttaacatttgcaatgttgcacatgttagacaaaccc 35512723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 305 - 342
Target Start/End: Complemental strand, 22331658 - 22331621
Alignment:
Q  305 ttttaacatgtgcaatgttgcacatgttagacaaaccc 342  Q
    ||||||||||||||||||||||||||||||||||||||    
T  22331658 ttttaacatgtgcaatgttgcacatgttagacaaaccc 22331621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 298 - 339
Target Start/End: Complemental strand, 25186881 - 25186840
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaa 339  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  25186881 ttagttgttttaacatgtgcaatgttgcacatattagacaaa 25186840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 298 - 343
Target Start/End: Complemental strand, 38812782 - 38812737
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||    
T  38812782 ttagttgttttaacatgtacaatgttgcacatgttaaacaaaccct 38812737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 298 - 342
Target Start/End: Complemental strand, 30171921 - 30171877
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 342  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||    
T  30171921 ttagatgtcttaacatgtgcaatgttgcacatgttagacaaaccc 30171877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 298 - 342
Target Start/End: Complemental strand, 30187462 - 30187418
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 342  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||    
T  30187462 ttagatgtcttaacatgtgcaatgttgcacatgttagacaaaccc 30187418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 307 - 343
Target Start/End: Complemental strand, 34802001 - 34801965
Alignment:
Q  307 ttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    |||||||||||||||||||||||||||||||||||||    
T  34802001 ttaacatgtgcaatgttgcacatgttagacaaaccct 34801965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 300 - 342
Target Start/End: Complemental strand, 23808475 - 23808433
Alignment:
Q  300 agttgttttaacatgtgcaatgttgcacatgttagacaaaccc 342  Q
    |||| |||||||||||||||||||| |||||||||||||||||    
T  23808475 agttattttaacatgtgcaatgttgtacatgttagacaaaccc 23808433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 297 - 343
Target Start/End: Complemental strand, 25532252 - 25532206
Alignment:
Q  297 gttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    ||||||| ||||||||||||| |||||| ||||||||||||||||||    
T  25532252 gttagttattttaacatgtgcgatgttgaacatgttagacaaaccct 25532206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 161 - 198
Target Start/End: Complemental strand, 13322054 - 13322017
Alignment:
Q  161 gtttttctatcatgtgcaaatttgcatattttaagaag 198  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  13322054 gtttttctatcatgtgcaaatttgcatatgttaagaag 13322017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 301 - 342
Target Start/End: Original strand, 34050422 - 34050463
Alignment:
Q  301 gttgttttaacatgtgcaatgttgcacatgttagacaaaccc 342  Q
    |||| ||||||||||||||| |||||||||||||||||||||    
T  34050422 gttgctttaacatgtgcaatattgcacatgttagacaaaccc 34050463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 298 - 343
Target Start/End: Original strand, 39150462 - 39150507
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    |||||||  |||||||||||||| ||||||||||||||||||||||    
T  39150462 ttagttgccttaacatgtgcaatattgcacatgttagacaaaccct 39150507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 343
Target Start/End: Original strand, 1502864 - 1502900
Alignment:
Q  307 ttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    |||||||||||||| ||||||||||||||||||||||    
T  1502864 ttaacatgtgcaatattgcacatgttagacaaaccct 1502900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 197
Target Start/End: Complemental strand, 23591880 - 23591840
Alignment:
Q  157 atgagtttttctatcatgtgcaaatttgcatattttaagaa 197  Q
    |||||||||||||||||||||||||||||| || |||||||    
T  23591880 atgagtttttctatcatgtgcaaatttgcacatgttaagaa 23591840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 298 - 338
Target Start/End: Complemental strand, 41624872 - 41624832
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaa 338  Q
    ||||||| ||||||||||||||| |||||||||||||||||    
T  41624872 ttagttgctttaacatgtgcaatattgcacatgttagacaa 41624832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 343
Target Start/End: Complemental strand, 51382405 - 51382369
Alignment:
Q  307 ttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    |||||||||||||| ||||||||||||||||||||||    
T  51382405 ttaacatgtgcaatattgcacatgttagacaaaccct 51382369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 307 - 342
Target Start/End: Complemental strand, 313783 - 313748
Alignment:
Q  307 ttaacatgtgcaatgttgcacatgttagacaaaccc 342  Q
    |||||||||||||| |||||||||||||||||||||    
T  313783 ttaacatgtgcaatattgcacatgttagacaaaccc 313748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 292 - 342
Target Start/End: Original strand, 399552 - 399602
Alignment:
Q  292 ctacggttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 342  Q
    ||||| ||||||| | ||||||||||||| |||| ||||||||||||||||    
T  399552 ctacgtttagttgctataacatgtgcaatattgcgcatgttagacaaaccc 399602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 156 - 198
Target Start/End: Complemental strand, 38812923 - 38812881
Alignment:
Q  156 tatgagtttttctatcatgtgcaaatttgcatattttaagaag 198  Q
    |||| |||||||||||||||||||||||||| || ||||||||    
T  38812923 tatgggtttttctatcatgtgcaaatttgcacatgttaagaag 38812881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 307 - 341
Target Start/End: Complemental strand, 44918058 - 44918024
Alignment:
Q  307 ttaacatgtgcaatgttgcacatgttagacaaacc 341  Q
    |||||||||||||| ||||||||||||||||||||    
T  44918058 ttaacatgtgcaatattgcacatgttagacaaacc 44918024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 198
Target Start/End: Complemental strand, 313927 - 313890
Alignment:
Q  161 gtttttctatcatgtgcaaatttgcatattttaagaag 198  Q
    |||||||||||||||||||||||||| || ||||||||    
T  313927 gtttttctatcatgtgcaaatttgcacatgttaagaag 313890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 198
Target Start/End: Complemental strand, 6180364 - 6180327
Alignment:
Q  161 gtttttctatcatgtgcaaatttgcatattttaagaag 198  Q
    |||||||||||||||||||||||||| || ||||||||    
T  6180364 gtttttctatcatgtgcaaatttgcacatgttaagaag 6180327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 343
Target Start/End: Complemental strand, 6307537 - 6307500
Alignment:
Q  306 tttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    |||||||| |||||| ||||||||||||||||||||||    
T  6307537 tttaacatatgcaattttgcacatgttagacaaaccct 6307500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 198
Target Start/End: Original strand, 6569985 - 6570022
Alignment:
Q  161 gtttttctatcatgtgcaaatttgcatattttaagaag 198  Q
    |||||||||||||||||||||||||| || ||||||||    
T  6569985 gtttttctatcatgtgcaaatttgcacatgttaagaag 6570022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 343
Target Start/End: Complemental strand, 6754514 - 6754469
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    |||||||  |||||||||||||| ||||||||||||||||| ||||    
T  6754514 ttagttgccttaacatgtgcaatattgcacatgttagacaatccct 6754469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 343
Target Start/End: Complemental strand, 17919496 - 17919451
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    |||||||  ||||||||| |||| ||||||||||||||||||||||    
T  17919496 ttagttgccttaacatgtacaatattgcacatgttagacaaaccct 17919451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 198
Target Start/End: Complemental strand, 25465336 - 25465299
Alignment:
Q  161 gtttttctatcatgtgcaaatttgcatattttaagaag 198  Q
    |||||||||||||||||||||||||| || ||||||||    
T  25465336 gtttttctatcatgtgcaaatttgcacatgttaagaag 25465299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 198
Target Start/End: Complemental strand, 30172057 - 30172020
Alignment:
Q  161 gtttttctatcatgtgcaaatttgcatattttaagaag 198  Q
    |||||||||||||||||||||||||| || ||||||||    
T  30172057 gtttttctatcatgtgcaaatttgcacatgttaagaag 30172020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 198
Target Start/End: Complemental strand, 30187598 - 30187561
Alignment:
Q  161 gtttttctatcatgtgcaaatttgcatattttaagaag 198  Q
    |||||||||||||||||||||||||| || ||||||||    
T  30187598 gtttttctatcatgtgcaaatttgcacatgttaagaag 30187561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 339
Target Start/End: Original strand, 31737669 - 31737710
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaa 339  Q
    |||||| |||||||||||| ||||||||| ||||||||||||    
T  31737669 ttagttattttaacatgtgtaatgttgcatatgttagacaaa 31737710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 198
Target Start/End: Complemental strand, 34802145 - 34802108
Alignment:
Q  161 gtttttctatcatgtgcaaatttgcatattttaagaag 198  Q
    |||||||||||||||||||||||||| || ||||||||    
T  34802145 gtttttctatcatgtgcaaatttgcacatgttaagaag 34802108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 198
Target Start/End: Complemental strand, 35512903 - 35512866
Alignment:
Q  161 gtttttctatcatgtgcaaatttgcatattttaagaag 198  Q
    |||||||||||||||||||||||||| || ||||||||    
T  35512903 gtttttctatcatgtgcaaatttgcacatgttaagaag 35512866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 198
Target Start/End: Complemental strand, 41625007 - 41624970
Alignment:
Q  161 gtttttctatcatgtgcaaatttgcatattttaagaag 198  Q
    |||||||||||||||||||||||||||||  |||||||    
T  41625007 gtttttctatcatgtgcaaatttgcatatgataagaag 41624970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 186
Target Start/End: Original strand, 51920427 - 51920456
Alignment:
Q  157 atgagtttttctatcatgtgcaaatttgca 186  Q
    ||||||||||||||||||||||||||||||    
T  51920427 atgagtttttctatcatgtgcaaatttgca 51920456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 161 - 197
Target Start/End: Original strand, 1502720 - 1502756
Alignment:
Q  161 gtttttctatcatgtgcaaatttgcatattttaagaa 197  Q
    |||||||||||||||||||||||||| || |||||||    
T  1502720 gtttttctatcatgtgcaaatttgcacatgttaagaa 1502756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 162 - 198
Target Start/End: Original strand, 5875216 - 5875252
Alignment:
Q  162 tttttctatcatgtgcaaatttgcatattttaagaag 198  Q
    ||||||||||||||||||||||||| || ||||||||    
T  5875216 tttttctatcatgtgcaaatttgcacatgttaagaag 5875252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 161 - 197
Target Start/End: Original strand, 23576414 - 23576450
Alignment:
Q  161 gtttttctatcatgtgcaaatttgcatattttaagaa 197  Q
    |||||||||||||||||||||||||| || |||||||    
T  23576414 gtttttctatcatgtgcaaatttgcacatgttaagaa 23576450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 339
Target Start/End: Original strand, 32716307 - 32716339
Alignment:
Q  307 ttaacatgtgcaatgttgcacatgttagacaaa 339  Q
    |||||||||||||| ||||||||||||||||||    
T  32716307 ttaacatgtgcaatattgcacatgttagacaaa 32716339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 2e-16; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 298 - 342
Target Start/End: Original strand, 26003627 - 26003671
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 342  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  26003627 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 26003671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 298 - 339
Target Start/End: Complemental strand, 7720157 - 7720116
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaa 339  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  7720157 ttagttgttttaacatgtgcaatgttgcacatgttagacaaa 7720116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 298 - 343
Target Start/End: Complemental strand, 16755013 - 16754968
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    |||||||||||||||| |||||||||||||||||||||||||||||    
T  16755013 ttagttgttttaacatttgcaatgttgcacatgttagacaaaccct 16754968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 302 - 343
Target Start/End: Complemental strand, 43806398 - 43806357
Alignment:
Q  302 ttgttttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  43806398 ttgttttaacatgtgcaatgttgcacatgttagacaaaccct 43806357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 298 - 343
Target Start/End: Original strand, 36612867 - 36612912
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||    
T  36612867 ttagttattttaacatgagcaatgttgcacatgttagacaaaccct 36612912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 298 - 343
Target Start/End: Original strand, 36620718 - 36620763
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||    
T  36620718 ttagttattttaacatgagcaatgttgcacatgttagacaaaccct 36620763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 298 - 342
Target Start/End: Original strand, 38148337 - 38148381
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 342  Q
    |||||||||||||||||||||| |||||||||| |||||||||||    
T  38148337 ttagttgttttaacatgtgcaaagttgcacatggtagacaaaccc 38148381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 159 - 198
Target Start/End: Complemental strand, 23932745 - 23932706
Alignment:
Q  159 gagtttttctatcatgtgcaaatttgcatattttaagaag 198  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  23932745 gagtttttctatcatgtgcaaatttgcatatattaagaag 23932706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 198
Target Start/End: Original strand, 5853458 - 5853500
Alignment:
Q  156 tatgagtttttctatcatgtgcaaatttgcatattttaagaag 198  Q
    ||||||||||||||||||||||||||||||| || ||||||||    
T  5853458 tatgagtttttctatcatgtgcaaatttgcacatgttaagaag 5853500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 198
Target Start/End: Original strand, 16493527 - 16493569
Alignment:
Q  156 tatgagtttttctatcatgtgcaaatttgcatattttaagaag 198  Q
    ||||||||||||||||||||||||||||||| || ||||||||    
T  16493527 tatgagtttttctatcatgtgcaaatttgcacatgttaagaag 16493569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 198
Target Start/End: Complemental strand, 22704720 - 22704678
Alignment:
Q  156 tatgagtttttctatcatgtgcaaatttgcatattttaagaag 198  Q
    ||||||||||||||||||||||||||||||| || ||||||||    
T  22704720 tatgagtttttctatcatgtgcaaatttgcacatcttaagaag 22704678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 302 - 343
Target Start/End: Original strand, 29981364 - 29981405
Alignment:
Q  302 ttgttttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    ||||||||||||||||||| ||||| ||||||||||||||||    
T  29981364 ttgttttaacatgtgcaatattgcatatgttagacaaaccct 29981405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 157 - 198
Target Start/End: Complemental strand, 45062380 - 45062339
Alignment:
Q  157 atgagtttttctatcatgtgcaaatttgcatattttaagaag 198  Q
    |||||||||||||||||||||||||||||| || ||||||||    
T  45062380 atgagtttttctatcatgtgcaaatttgcacatattaagaag 45062339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 343
Target Start/End: Complemental strand, 12016700 - 12016664
Alignment:
Q  307 ttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    |||||||||||||| ||||||||||||||||||||||    
T  12016700 ttaacatgtgcaatattgcacatgttagacaaaccct 12016664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 342
Target Start/End: Original strand, 15411766 - 15411802
Alignment:
Q  306 tttaacatgtgcaatgttgcacatgttagacaaaccc 342  Q
    ||||||||||||||| |||||||||||||||||||||    
T  15411766 tttaacatgtgcaatattgcacatgttagacaaaccc 15411802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 343
Target Start/End: Original strand, 16126703 - 16126739
Alignment:
Q  307 ttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    |||||||||||||| ||||||||||||||||||||||    
T  16126703 ttaacatgtgcaatattgcacatgttagacaaaccct 16126739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 343
Target Start/End: Complemental strand, 19228459 - 19228423
Alignment:
Q  307 ttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    |||||||||||||| ||||||||||||||||||||||    
T  19228459 ttaacatgtgcaatattgcacatgttagacaaaccct 19228423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 342
Target Start/End: Complemental strand, 23932599 - 23932563
Alignment:
Q  306 tttaacatgtgcaatgttgcacatgttagacaaaccc 342  Q
    ||||||||||||||| |||||||||||||||||||||    
T  23932599 tttaacatgtgcaatattgcacatgttagacaaaccc 23932563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 343
Target Start/End: Original strand, 26229997 - 26230033
Alignment:
Q  307 ttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    |||||||||||||| ||||||||||||||||||||||    
T  26229997 ttaacatgtgcaatattgcacatgttagacaaaccct 26230033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 298 - 342
Target Start/End: Original strand, 27665179 - 27665223
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 342  Q
    |||||||  |||||||||||||| |||||||||||||||||||||    
T  27665179 ttagttgccttaacatgtgcaatattgcacatgttagacaaaccc 27665223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 342
Target Start/End: Complemental strand, 35729150 - 35729114
Alignment:
Q  306 tttaacatgtgcaatgttgcacatgttagacaaaccc 342  Q
    ||||||||||||||| |||||||||||||||||||||    
T  35729150 tttaacatgtgcaatattgcacatgttagacaaaccc 35729114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 307 - 342
Target Start/End: Original strand, 5583702 - 5583737
Alignment:
Q  307 ttaacatgtgcaatgttgcacatgttagacaaaccc 342  Q
    |||||||||||||| |||||||||||||||||||||    
T  5583702 ttaacatgtgcaatattgcacatgttagacaaaccc 5583737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 298 - 337
Target Start/End: Complemental strand, 8064881 - 8064842
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagaca 337  Q
    |||| |||||||||| ||||||||||||||||||||||||    
T  8064881 ttagatgttttaacacgtgcaatgttgcacatgttagaca 8064842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 307 - 342
Target Start/End: Complemental strand, 10690816 - 10690781
Alignment:
Q  307 ttaacatgtgcaatgttgcacatgttagacaaaccc 342  Q
    |||||||||||||| |||||||||||||||||||||    
T  10690816 ttaacatgtgcaatattgcacatgttagacaaaccc 10690781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 159 - 198
Target Start/End: Original strand, 11660892 - 11660931
Alignment:
Q  159 gagtttttctatcatgtgcaaatttgcatattttaagaag 198  Q
    |||||||||||||||||||||||||||| || ||||||||    
T  11660892 gagtttttctatcatgtgcaaatttgcacatgttaagaag 11660931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 307 - 342
Target Start/End: Original strand, 16919298 - 16919333
Alignment:
Q  307 ttaacatgtgcaatgttgcacatgttagacaaaccc 342  Q
    |||||||||||||| |||||||||||||||||||||    
T  16919298 ttaacatgtgcaatattgcacatgttagacaaaccc 16919333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 307 - 342
Target Start/End: Complemental strand, 22705488 - 22705453
Alignment:
Q  307 ttaacatgtgcaatgttgcacatgttagacaaaccc 342  Q
    |||||||||||||| |||||||||||||||||||||    
T  22705488 ttaacatgtgcaatattgcacatgttagacaaaccc 22705453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 307 - 342
Target Start/End: Original strand, 39904192 - 39904227
Alignment:
Q  307 ttaacatgtgcaatgttgcacatgttagacaaaccc 342  Q
    |||||||||||||| |||||||||||||||||||||    
T  39904192 ttaacatgtgcaatattgcacatgttagacaaaccc 39904227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 156 - 198
Target Start/End: Complemental strand, 15232014 - 15231972
Alignment:
Q  156 tatgagtttttctatcatgtgcaaatttgcatattttaagaag 198  Q
    ||||||||||||||| ||||||||||||||| || ||||||||    
T  15232014 tatgagtttttctattatgtgcaaatttgcacatgttaagaag 15231972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 198
Target Start/End: Complemental strand, 6109567 - 6109530
Alignment:
Q  161 gtttttctatcatgtgcaaatttgcatattttaagaag 198  Q
    |||||||||||||||||||||||||| || ||||||||    
T  6109567 gtttttctatcatgtgcaaatttgcacatgttaagaag 6109530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 198
Target Start/End: Complemental strand, 8065301 - 8065264
Alignment:
Q  161 gtttttctatcatgtgcaaatttgcatattttaagaag 198  Q
    |||||||||||||||||||||||||| || ||||||||    
T  8065301 gtttttctatcatgtgcaaatttgcacatgttaagaag 8065264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 198
Target Start/End: Complemental strand, 12016844 - 12016807
Alignment:
Q  161 gtttttctatcatgtgcaaatttgcatattttaagaag 198  Q
    |||||||||||||||||||||||||| || ||||||||    
T  12016844 gtttttctatcatgtgcaaatttgcacatattaagaag 12016807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 339
Target Start/End: Original strand, 12919495 - 12919528
Alignment:
Q  306 tttaacatgtgcaatgttgcacatgttagacaaa 339  Q
    ||||||||||||||| ||||||||||||||||||    
T  12919495 tttaacatgtgcaatattgcacatgttagacaaa 12919528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 198
Target Start/End: Original strand, 16126559 - 16126596
Alignment:
Q  161 gtttttctatcatgtgcaaatttgcatattttaagaag 198  Q
    |||||||||||||||||||||||||| || ||||||||    
T  16126559 gtttttctatcatgtgcaaatttgcacatgttaagaag 16126596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 343
Target Start/End: Complemental strand, 29795092 - 29795055
Alignment:
Q  306 tttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    ||||| ||||||||| ||||||||||||||||||||||    
T  29795092 tttaatatgtgcaatattgcacatgttagacaaaccct 29795055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 198
Target Start/End: Original strand, 43388481 - 43388518
Alignment:
Q  161 gtttttctatcatgtgcaaatttgcatattttaagaag 198  Q
    |||||||||||||||||||||||||| || ||||||||    
T  43388481 gtttttctatcatgtgcaaatttgcacatgttaagaag 43388518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 343
Target Start/End: Original strand, 43388902 - 43388947
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    ||||||| ||||| ||||||||| |||||||| |||||||||||||    
T  43388902 ttagttgctttaagatgtgcaatattgcacatattagacaaaccct 43388947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 161 - 197
Target Start/End: Original strand, 4576326 - 4576362
Alignment:
Q  161 gtttttctatcatgtgcaaatttgcatattttaagaa 197  Q
    |||||||||||||||||||||| |||||| |||||||    
T  4576326 gtttttctatcatgtgcaaattcgcatatgttaagaa 4576362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 298 - 342
Target Start/End: Complemental strand, 14377467 - 14377423
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 342  Q
    |||||||  |||||||||||||| |||||| ||||||||||||||    
T  14377467 ttagttgccttaacatgtgcaatattgcacgtgttagacaaaccc 14377423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 306 - 342
Target Start/End: Original strand, 20566161 - 20566197
Alignment:
Q  306 tttaacatgtgcaatgttgcacatgttagacaaaccc 342  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  20566161 tttaacatgtgcaatattgcacatgttagacagaccc 20566197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 161 - 197
Target Start/End: Original strand, 24729577 - 24729613
Alignment:
Q  161 gtttttctatcatgtgcaaatttgcatattttaagaa 197  Q
    |||||||||||||||||||||||||| || |||||||    
T  24729577 gtttttctatcatgtgcaaatttgcacatgttaagaa 24729613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 161 - 197
Target Start/End: Original strand, 29157829 - 29157865
Alignment:
Q  161 gtttttctatcatgtgcaaatttgcatattttaagaa 197  Q
    |||||||||||||||||||||||||| || |||||||    
T  29157829 gtttttctatcatgtgcaaatttgcacatgttaagaa 29157865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 161 - 197
Target Start/End: Original strand, 38248420 - 38248456
Alignment:
Q  161 gtttttctatcatgtgcaaatttgcatattttaagaa 197  Q
    |||||||||||||||||||||||||| || |||||||    
T  38248420 gtttttctatcatgtgcaaatttgcacatgttaagaa 38248456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 298 - 342
Target Start/End: Original strand, 13794 - 13838
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 342  Q
    |||||||||||||||||||||||||||||||||||||| ||||||    
T  13794 ttagttgttttaacatgtgcaatgttgcacatgttagaaaaaccc 13838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 198
Target Start/End: Original strand, 94014 - 94055
Alignment:
Q  157 atgagtttttctatcatgtgcaaatttgcatattttaagaag 198  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  94014 atgagtttttctatcatgtgcaaatttgcatatgttaagaag 94055  T

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Target: scaffold0036; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 298 - 339
Target Start/End: Original strand, 94154 - 94195
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaa 339  Q
    ||||||| ||||||||||||||||||||| ||||||||||||    
T  94154 ttagttgatttaacatgtgcaatgttgcatatgttagacaaa 94195  T

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Target: scaffold0028 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 298 - 343
Target Start/End: Original strand, 31836 - 31881
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||    
T  31836 ttagttgctctaacatgtgcaatgttgcacatgttagacaaaccct 31881  T

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Target: scaffold0111 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 307 - 342
Target Start/End: Original strand, 37259 - 37294
Alignment:
Q  307 ttaacatgtgcaatgttgcacatgttagacaaaccc 342  Q
    ||||||||||||||||||||||||||||||||||||    
T  37259 ttaacatgtgcaatgttgcacatgttagacaaaccc 37294  T

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Target: scaffold0111; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 198
Target Start/End: Original strand, 37114 - 37151
Alignment:
Q  161 gtttttctatcatgtgcaaatttgcatattttaagaag 198  Q
    |||||||||||||||||||||||||| || ||||||||    
T  37114 gtttttctatcatgtgcaaatttgcacatgttaagaag 37151  T

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Target: scaffold0061 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 343
Target Start/End: Original strand, 52923 - 52959
Alignment:
Q  307 ttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    |||||||||||||| ||||||||||||||||||||||    
T  52923 ttaacatgtgcaatattgcacatgttagacaaaccct 52959  T

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Target: scaffold0061; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 198
Target Start/End: Original strand, 52779 - 52816
Alignment:
Q  161 gtttttctatcatgtgcaaatttgcatattttaagaag 198  Q
    |||||||||||||||||||||||||| || ||||||||    
T  52779 gtttttctatcatgtgcaaatttgcacatgttaagaag 52816  T

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Target: scaffold0017 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 343
Target Start/End: Complemental strand, 145711 - 145675
Alignment:
Q  307 ttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    |||||||||||||| ||||||||||||||||||||||    
T  145711 ttaacatgtgcaatattgcacatgttagacaaaccct 145675  T

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Target: scaffold0017; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 198
Target Start/End: Complemental strand, 145855 - 145818
Alignment:
Q  161 gtttttctatcatgtgcaaatttgcatattttaagaag 198  Q
    |||||||||||||||||||||||||| || ||||||||    
T  145855 gtttttctatcatgtgcaaatttgcacatgttaagaag 145818  T

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Target: scaffold0631 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0631
Description:

Target: scaffold0631; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 339
Target Start/End: Complemental strand, 484 - 443
Alignment:
Q  298 ttagttgttttaacatgtgcaatgttgcacatgttagacaaa 339  Q
    ||||||| ||||||||||||||| |||||||||||| |||||    
T  484 ttagttgatttaacatgtgcaatattgcacatgttaaacaaa 443  T

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Target: scaffold0011 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 198
Target Start/End: Complemental strand, 13263 - 13226
Alignment:
Q  161 gtttttctatcatgtgcaaatttgcatattttaagaag 198  Q
    |||||||||||||||||||||||||| || ||||||||    
T  13263 gtttttctatcatgtgcaaatttgcacatgttaagaag 13226  T

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Target: scaffold0011; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 343
Target Start/End: Complemental strand, 13119 - 13083
Alignment:
Q  307 ttaacatgtgcaatgttgcacatgttagacaaaccct 343  Q
    ||||||| |||||| ||||||||||||||||||||||    
T  13119 ttaacatatgcaatattgcacatgttagacaaaccct 13083  T

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Target: scaffold0009 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 307 - 340
Target Start/End: Original strand, 193377 - 193410
Alignment:
Q  307 ttaacatgtgcaatgttgcacatgttagacaaac 340  Q
    |||||||||||||| |||||||||||||||||||    
T  193377 ttaacatgtgcaatattgcacatgttagacaaac 193410  T

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Target: scaffold0007 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 189
Target Start/End: Original strand, 2447 - 2476
Alignment:
Q  160 agtttttctatcatgtgcaaatttgcatat 189  Q
    ||||||||||||||||||||||||||||||    
T  2447 agtttttctatcatgtgcaaatttgcatat 2476  T

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Target: scaffold0727 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0727
Description:

Target: scaffold0727; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 339
Target Start/End: Complemental strand, 5724 - 5692
Alignment:
Q  307 ttaacatgtgcaatgttgcacatgttagacaaa 339  Q
    |||||||||||||| ||||||||||||||||||    
T  5724 ttaacatgtgcaatattgcacatgttagacaaa 5692  T

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Target: scaffold0305 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 312 - 340
Target Start/End: Original strand, 17951 - 17979
Alignment:
Q  312 atgtgcaatgttgcacatgttagacaaac 340  Q
    |||||||||||||||||||||||||||||    
T  17951 atgtgcaatgttgcacatgttagacaaac 17979  T

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