View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1441_low_108 (Length: 247)
Name: NF1441_low_108
Description: NF1441
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1441_low_108 |
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Alignment Details
Target: chr7 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 14 - 230
Target Start/End: Original strand, 33581948 - 33582164
Alignment:
| Q |
14 |
aaatcgtctatacttttcagattcattttgtttctcttcaaagaataggtaaaggagtatgtattccaattcctctcagttctcactgcatgacgacaaa |
113 |
Q |
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| T |
33581948 |
aaatcctctatacttttcagattcattttgtttctcttcaaagaataggtaaaggagtatgtattccaattcctctcagttctcactgcatgacgacaaa |
33582047 |
T |
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| Q |
114 |
caaagttgtactacaagctttaaggccagtctttggaaccatatcccaaacttactggtcaatttcatgaaaataattgagatgtaggatacttcctaga |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33582048 |
caaagttgtactacaagctttaaggccagtctttggaaccgtattccaaacttactggtcaatttcatgaaaataattgagatgtaggatacttcctaga |
33582147 |
T |
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| Q |
214 |
ttcatatgtaggcattt |
230 |
Q |
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||||||||||| ||||| |
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| T |
33582148 |
ttcatatgtagacattt |
33582164 |
T |
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