View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1441_low_135 (Length: 234)
Name: NF1441_low_135
Description: NF1441
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1441_low_135 |
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Alignment Details
Target: chr1 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 14 - 216
Target Start/End: Complemental strand, 6250896 - 6250694
Alignment:
| Q |
14 |
aatattccaaaagttaataagggggagaaaaagtaatggaccttataacacaattcactgtttccatcgaaagaatccaaataacctgaaacacaaatca |
113 |
Q |
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| T |
6250896 |
aatattcccaaagttaataagggggagaaaaagtaatggaccttataacccaagtcactgtttccatcgaaagaatccaaataacctgaaacacaaatca |
6250797 |
T |
|
| Q |
114 |
aatcatttggtttcaagtgttcataagcaatttcagccacattgttccacatcataagaagcaccctgttagcaaaacgcagaacaaaatgtccgttttg |
213 |
Q |
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| T |
6250796 |
aatcatttggtttcaagtgttcataagcaatttcagccacattgttccacatcataagaagcaccctgttaacaaaacgcagaacaaaatgtccgttttg |
6250697 |
T |
|
| Q |
214 |
aat |
216 |
Q |
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||| |
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| T |
6250696 |
aat |
6250694 |
T |
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