View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1441_low_154 (Length: 217)
Name: NF1441_low_154
Description: NF1441
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1441_low_154 |
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Alignment Details
Target: chr8 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 14 - 200
Target Start/End: Original strand, 3413392 - 3413578
Alignment:
| Q |
14 |
aatatatcagctcatcattattcagtcataaatcatgtaagagtattaagttatctcttttttggataaaatccacatgaatgatgtatgctcctacaag |
113 |
Q |
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| T |
3413392 |
aatatatcagctcatcattattcagtcataaatcatgtaagagtattaagttatctcttttttggataaaatccacatgaatgatgtatgctcctacaag |
3413491 |
T |
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| Q |
114 |
agataatcatgatcgagatcaacagaacaacaagttaactccgctctgagagaatatttttagcaaaagatcaaaccaagaacctat |
200 |
Q |
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| T |
3413492 |
agataatcatgatcgagatcaacagaacaacaagttaactccgctctgagagaatatttttagcaaaagatcaaaccaagaacctat |
3413578 |
T |
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