View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14420_low_7 (Length: 298)
Name: NF14420_low_7
Description: NF14420
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14420_low_7 |
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Alignment Details
Target: chr1 (Bit Score: 171; Significance: 7e-92; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 171; E-Value: 7e-92
Query Start/End: Original strand, 24 - 231
Target Start/End: Original strand, 6092228 - 6092445
Alignment:
| Q |
24 |
ggtttatatatttcagggcagtaagtgctatgcaaataaagaattaatgttgttgaagaaatatgagtttgtatttgtgatatgatgatagttgatgatg |
123 |
Q |
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| T |
6092228 |
ggtttatatatttcagggcagtaagtgctatgcaaataaagaattaatgttgttgaagaaatatgagtttgtgtttgtgatatgatgatagttgatgatg |
6092327 |
T |
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| Q |
124 |
atatttatagtggggtgaatggcaagtgtaatgactccg----------tttgatctggtccatgttgaacttgagcagtcaaagggggctgcggaatgg |
213 |
Q |
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| T |
6092328 |
atatttatagtggggtggatggcaagtgtaatgactccgttagatttgatttgatctggtccatgttgaacttgagccgtcaaagggggctgcggaatgg |
6092427 |
T |
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| Q |
214 |
tttaaattgtagaataat |
231 |
Q |
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| T |
6092428 |
tttaaattgtagaataat |
6092445 |
T |
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