View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14422_low_8 (Length: 222)

Name: NF14422_low_8
Description: NF14422
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14422_low_8
NF14422_low_8
[»] chr8 (7 HSPs)
chr8 (1-214)||(42455857-42456069)
chr8 (1-74)||(32927837-32927910)
chr8 (1-67)||(26668497-26668563)
chr8 (1-65)||(11791810-11791874)
chr8 (2-64)||(5997360-5997422)
chr8 (10-79)||(35525366-35525435)
chr8 (1-69)||(37684350-37684418)
[»] chr7 (7 HSPs)
chr7 (1-74)||(5489913-5489986)
chr7 (1-74)||(45004965-45005038)
chr7 (1-52)||(12306922-12306973)
chr7 (1-45)||(17111820-17111864)
chr7 (1-81)||(28725112-28725192)
chr7 (1-74)||(41386882-41386955)
chr7 (1-49)||(12306679-12306727)
[»] chr6 (13 HSPs)
chr6 (2-67)||(35098532-35098597)
chr6 (1-69)||(25195436-25195504)
chr6 (1-64)||(6653754-6653817)
chr6 (1-74)||(5724697-5724770)
chr6 (1-81)||(26280550-26280630)
chr6 (12-74)||(2008569-2008631)
chr6 (7-64)||(2234291-2234348)
chr6 (1-74)||(6654157-6654230)
chr6 (1-81)||(765446-765526)
chr6 (1-81)||(4910853-4910933)
chr6 (1-69)||(1485218-1485287)
chr6 (4-45)||(18690620-18690661)
chr6 (1-69)||(7952781-7952849)
[»] chr5 (8 HSPs)
chr5 (1-74)||(34250418-34250491)
chr5 (2-69)||(5468719-5468786)
chr5 (1-64)||(10898667-10898730)
chr5 (1-64)||(42439695-42439758)
chr5 (39-81)||(9818717-9818759)
chr5 (1-74)||(11648027-11648100)
chr5 (1-77)||(4848205-4848281)
chr5 (37-69)||(13171833-13171865)
[»] chr4 (10 HSPs)
chr4 (1-74)||(35065008-35065081)
chr4 (1-64)||(25318992-25319055)
chr4 (1-59)||(26617709-26617767)
chr4 (2-64)||(33560648-33560710)
chr4 (1-74)||(2635108-2635181)
chr4 (11-81)||(32818430-32818500)
chr4 (1-69)||(46344904-46344971)
chr4 (7-64)||(8330066-8330123)
chr4 (1-57)||(22683808-22683864)
chr4 (41-69)||(39733709-39733737)
[»] chr1 (7 HSPs)
chr1 (1-82)||(47321965-47322046)
chr1 (3-61)||(646127-646185)
chr1 (1-81)||(28083948-28084028)
chr1 (1-69)||(24587854-24587922)
chr1 (12-63)||(31362279-31362330)
chr1 (1-74)||(6021749-6021822)
chr1 (1-61)||(49824834-49824894)
[»] scaffold0168 (1 HSPs)
scaffold0168 (1-74)||(31771-31844)
[»] chr3 (9 HSPs)
chr3 (1-69)||(1441453-1441521)
chr3 (1-61)||(54596763-54596823)
chr3 (3-61)||(7717453-7717511)
chr3 (1-74)||(7717388-7717460)
chr3 (4-81)||(41115422-41115499)
chr3 (37-69)||(25359646-25359678)
chr3 (1-76)||(33548188-33548264)
chr3 (1-69)||(35264483-35264551)
chr3 (1-81)||(40736597-40736677)
[»] chr2 (13 HSPs)
chr2 (6-74)||(680344-680412)
chr2 (13-81)||(31453340-31453408)
chr2 (1-52)||(7630361-7630412)
chr2 (1-74)||(42740922-42740995)
chr2 (1-80)||(33502909-33502989)
chr2 (10-69)||(32777924-32777983)
chr2 (1-64)||(36987189-36987252)
chr2 (1-43)||(15928532-15928574)
chr2 (1-66)||(1976940-1977005)
chr2 (1-74)||(2002762-2002835)
chr2 (1-66)||(37420272-37420337)
chr2 (1-69)||(10644549-10644616)
chr2 (1-45)||(43501088-43501132)


Alignment Details
Target: chr8 (Bit Score: 190; Significance: 1e-103; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 42455857 - 42456069
Alignment:
Q  1 aattgattttgacatgtttggttgcttttgagtaggattgattctgcctccataattgattctacttgatgctataatttgccccatagattttgacata 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  42455857 aattgattttgacatgtttggttgcttttgagtaggattgattctgcctccataattgattctacttgatgctataatttgccccatagattttgacatg 42455956  T
Q  101 tgtcatagcttttctctttttgtgtgaacttcttaataaataaatcatcatgccccacatataaaaattattggatccgtcactgtacacttgtgaacat 200  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  42455957 t-tcatagcttttctctttttgtgtgaacttcttaataaataaatcatcatgcctcgcatataaaaattattggatccgtcactgtacacttgtgaacat 42456055  T
Q  201 atctgtgctgctcc 214  Q
    ||||||||| ||||    
T  42456056 atctgtgctcctcc 42456069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 32927837 - 32927910
Alignment:
Q  1 aattgattttgacatgtttggttgcttttgagtaggattgattctgcctccataattgattctacttgatgcta 74  Q
    |||||| | |||||||||||||||||||  ||||| ||||||| |||||| ||| |||||||||||||| ||||    
T  32927837 aattgactctgacatgtttggttgctttccagtagaattgattttgcctcaatagttgattctacttgaagcta 32927910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 26668497 - 26668563
Alignment:
Q  1 aattgattttgacatgtttggttgcttttgagtaggattgattctgcctccataattgattctactt 67  Q
    |||||||| | ||||||||| ||  | | |||||| |||||||||||||||||||||||||||||||    
T  26668497 aattgattctaacatgtttgattcttgtcgagtagaattgattctgcctccataattgattctactt 26668563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 11791874 - 11791810
Alignment:
Q  1 aattgattttgacatgtttggttgcttttgagtaggattgattctgcctccataattgattctac 65  Q
    ||||||||||| ||||||||||||| ||||| ||  ||||| | ||||||||||| |||||||||    
T  11791874 aattgattttggcatgtttggttgcctttgaatataattgaatttgcctccataactgattctac 11791810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 5997422 - 5997360
Alignment:
Q  2 attgattttgacatgtttggttgcttttgagtaggattgattctgcctccataattgattcta 64  Q
    |||||||||||||||||||| || |||||||||  ||||||| |||||| | || ||||||||    
T  5997422 attgattttgacatgtttggatgtttttgagtaaaattgattttgcctctaaaagtgattcta 5997360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 10 - 79
Target Start/End: Original strand, 35525366 - 35525435
Alignment:
Q  10 tgacatgtttggttgcttttgagtaggattgattctgcctccataattgattctacttgatgctataatt 79  Q
    ||||||||||| ||| | | |||||| ||||||||| || ||| |||||||| ||||||| |||||||||    
T  35525366 tgacatgtttgattgttgtcgagtagaattgattctaccaccagaattgattgtacttgaagctataatt 35525435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 37684350 - 37684418
Alignment:
Q  1 aattgattttgacatgtttggttgcttttgagtaggattgattctgcctccataattgattctacttga 69  Q
    ||||||||  || ||||||||||| | | |||||| ||||||| || ||||| ||||||||||||||||    
T  37684350 aattgattccgaaatgtttggttgttgtggagtagaattgattttgtctccagaattgattctacttga 37684418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 5489986 - 5489913
Alignment:
Q  1 aattgattttgacatgtttggttgcttttgagtaggattgattctgcctccataattgattctacttgatgcta 74  Q
    |||||||| | |||||||||||||||  ||||||| ||| ||| |||||||| |||||||||||||||||||||    
T  5489986 aattgattcttacatgtttggttgctcctgagtagaattaattttgcctccaaaattgattctacttgatgcta 5489913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 45004965 - 45005038
Alignment:
Q  1 aattgattttgacatgtttggttgcttttgagtaggattgattctgcctccataattgattctacttgatgcta 74  Q
    |||||||||||||||||||||||||| | || ||| ||||||| ||||| || |||||||||||||||| ||||    
T  45004965 aattgattttgacatgtttggttgctctcgaatagaattgattttgccttcagaattgattctacttgaagcta 45005038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 12306922 - 12306973
Alignment:
Q  1 aattgattttgacatgtttggttgcttttgagtaggattgattctgcctcca 52  Q
    |||||||||||||||||||||||||| |||||||| ||||||| ||||||||    
T  12306922 aattgattttgacatgtttggttgctcttgagtagaattgattttgcctcca 12306973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 17111820 - 17111864
Alignment:
Q  1 aattgattttgacatgtttggttgcttttgagtaggattgattct 45  Q
    |||||||| ||||||||||||||||||| |||||| |||||||||    
T  17111820 aattgattctgacatgtttggttgctttcgagtagaattgattct 17111864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 28725192 - 28725112
Alignment:
Q  1 aattgattttgacatgtttggttgcttttgagtaggattgattctgcctccataattgattctacttgatgctataatttg 81  Q
    ||||||||| |||||||||||||| ||| |  ||| |||||||| |||||||  ||||||| ||||||| |||| ||||||    
T  28725192 aattgatttagacatgtttggttgttttcgtttagaattgattcagcctccaatattgattatacttgaagctagaatttg 28725112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 41386955 - 41386882
Alignment:
Q  1 aattgattttgacatgtttggttgcttttgagtaggattgattctgcctccataattgattctacttgatgcta 74  Q
    |||||||| ||||||||||| ||||||| |||||  |||||||   ||| || |||||||||||||||| ||||    
T  41386955 aattgattctgacatgtttgattgctttcgagtataattgatttcaccttcagaattgattctacttgaagcta 41386882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 12306679 - 12306727
Alignment:
Q  1 aattgattttgacatgtttggttgcttttgagtaggattgattctgcct 49  Q
    |||||||||||||||||||||||||| |  ||||| ||||||| |||||    
T  12306679 aattgattttgacatgtttggttgctctcaagtagaattgattttgcct 12306727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 35098597 - 35098532
Alignment:
Q  2 attgattttgacatgtttggttgcttttgagtaggattgattctgcctccataattgattctactt 67  Q
    |||||||||||||||||||||| ||||||||||| ||||||| ||| ||||  |||||||||||||    
T  35098597 attgattttgacatgtttggttacttttgagtagaattgattttgcttccaggattgattctactt 35098532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 25195504 - 25195436
Alignment:
Q  1 aattgattttgacatgtttggttgcttttgagtaggattgattctgcctccataattgattctacttga 69  Q
    |||||||| ||||||||||||||||| | |||||  |||||||||||||||  ||||||||||||||||    
T  25195504 aattgattctgacatgtttggttgctatcgagtataattgattctgcctccggaattgattctacttga 25195436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 6653754 - 6653817
Alignment:
Q  1 aattgattttgacatgtttggttgcttttgagtaggattgattctgcctccataattgattcta 64  Q
    ||||||||||||| |||||||||||| |  ||||| |||||||||||||| |||||||||||||    
T  6653754 aattgattttgacttgtttggttgctgtcaagtagaattgattctgcctctataattgattcta 6653817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 5724770 - 5724697
Alignment:
Q  1 aattgattttgacatgtttggttgcttttgagtaggattgattctgcctccataattgattctacttgatgcta 74  Q
    |||||||| |||||||||||| ||||||   |||| ||||||| |||||||| |||||||||||||||| ||||    
T  5724770 aattgattctgacatgtttggatgctttcaggtagaattgattttgcctccaaaattgattctacttgaagcta 5724697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 26280550 - 26280630
Alignment:
Q  1 aattgattttgacatgtttggttgcttttgagtaggattgattctgcctccataattgattctacttgatgctataatttg 81  Q
    |||||||||||||||||||| ||| ||||  |||| ||||||| |||||| | ||||||||| |||||| |||| ||||||    
T  26280550 aattgattttgacatgtttgattgttttttggtagaattgattttgcctcaagaattgattccacttgaagctagaatttg 26280630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 2008631 - 2008569
Alignment:
Q  12 acatgtttggttgcttttgagtaggattgattctgcctccataattgattctacttgatgcta 74  Q
    |||||||||||||||||  ||||| ||||||| |||||||| |||| ||||||| ||||||||    
T  2008631 acatgtttggttgctttctagtagaattgattttgcctccagaattaattctacgtgatgcta 2008569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 2234348 - 2234291
Alignment:
Q  7 ttttgacatgtttggttgcttttgagtaggattgattctgcctccataattgattcta 64  Q
    |||||| ||||||||||||| |||||||| ||||||| |||||||  |||||||||||    
T  2234348 ttttgatatgtttggttgctcttgagtagaattgattttgcctcctgaattgattcta 2234291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 6654230 - 6654157
Alignment:
Q  1 aattgattttgacatgtttggttgcttttgagtaggattgattctgcctccataattgattctacttgatgcta 74  Q
    |||||||| || |||||||||||||| |||||||| ||||||| | ||| || |||| ||||||||||| ||||    
T  6654230 aattgattatgtcatgtttggttgctattgagtagaattgatttttccttcagaattaattctacttgaagcta 6654157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 765526 - 765446
Alignment:
Q  1 aattgattttgacatgtttggttgcttttgagtaggattgattctgcctccataattgattctacttgatgctataatttg 81  Q
    |||||||| |||| ||||||||||||||| ||||| | || || || ||| | |||||||||||||||| ||||| |||||    
T  765526 aattgattctgacgtgtttggttgcttttaagtagaactggttttggctcaagaattgattctacttgaagctatgatttg 765446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 4910853 - 4910933
Alignment:
Q  1 aattgattttgacatgtttggttgcttttgagtaggattgattctgcctccataattgattctacttgatgctataatttg 81  Q
    |||||||| |||||||||||||||   |  | ||| |||||||||||||| | |||||||||||||||| ||||| |||||    
T  4910853 aattgattctgacatgtttggttgtcgtcaattagaattgattctgcctcaaaaattgattctacttgaagctatgatttg 4910933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 1485287 - 1485218
Alignment:
Q  1 aattgatt-ttgacatgtttggttgcttttgagtaggattgattctgcctccataattgattctacttga 69  Q
    |||||||| |||||||||||| ||||| |||||||| ||| ||| |||||  | ||||||||||||||||    
T  1485287 aattgattcttgacatgtttgtttgctcttgagtagaattaattttgcctttagaattgattctacttga 1485218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 18690620 - 18690661
Alignment:
Q  4 tgattttgacatgtttggttgcttttgagtaggattgattct 45  Q
    |||||||||||||||||||||||||  ||||| |||||||||    
T  18690620 tgattttgacatgtttggttgctttcaagtagaattgattct 18690661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 7952849 - 7952781
Alignment:
Q  1 aattgattttgacatgtttggttgcttttgagtaggattgattctgcctccataattgattctacttga 69  Q
    |||||||| ||||||||||| ||| |||||||| |  || ||| |||||||| |||| |||||||||||    
T  7952849 aattgattatgacatgtttgattggttttgagttgatttaattttgcctccaaaatttattctacttga 7952781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 34250491 - 34250418
Alignment:
Q  1 aattgattttgacatgtttggttgcttttgagtaggattgattctgcctccataattgattctacttgatgcta 74  Q
    ||||| ||||||||||||||||| || | |||||| ||||||| |||||| | |||||||||||||||||||||    
T  34250491 aattgtttttgacatgtttggtttctctagagtagaattgattatgcctctagaattgattctacttgatgcta 34250418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 69
Target Start/End: Original strand, 5468719 - 5468786
Alignment:
Q  2 attgattttgacatgtttggttgcttttgagtaggattgattctgcctccataattgattctacttga 69  Q
    ||||||| ||||||||||| ||| | | || ||  |||||||||||||||||| ||||||||||||||    
T  5468719 attgattatgacatgtttgattgttgtcgattataattgattctgcctccatatttgattctacttga 5468786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 10898667 - 10898730
Alignment:
Q  1 aattgattttgacatgtttggttgcttttgagtaggattgattctgcctccataattgattcta 64  Q
    |||| ||||||||||||||||||||| | |||||  ||||||| |||||| | |||||||||||    
T  10898667 aattaattttgacatgtttggttgctctcgagtaaaattgattttgcctctagaattgattcta 10898730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 42439758 - 42439695
Alignment:
Q  1 aattgattttgacatgtttggttgcttttgagtaggattgattctgcctccataattgattcta 64  Q
    ||||||||||||||  ||||||||||| ||| ||| ||||||| | |||||| |||||||||||    
T  42439758 aattgattttgacacatttggttgcttgtgactagaattgatttttcctccagaattgattcta 42439695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 81
Target Start/End: Original strand, 9818717 - 9818759
Alignment:
Q  39 tgattctgcctccataattgattctacttgatgctataatttg 81  Q
    ||||| ||||||||||||||||||||||||| ||||| |||||    
T  9818717 tgattttgcctccataattgattctacttgaagctatgatttg 9818759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 11648027 - 11648100
Alignment:
Q  1 aattgattttgacatgtttggttgcttttgagtaggattgattctgcctccataattgattctacttgatgcta 74  Q
    |||||||||||||||||||| ||||| | |||||| ||| ||| ||| |  | |||||||||||||||| ||||    
T  11648027 aattgattttgacatgtttgattgctgtcgagtagaatttattatgcatttaaaattgattctacttgaagcta 11648100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 4848281 - 4848205
Alignment:
Q  1 aattgattttgacatgtttggttgcttttgagtaggattgattctgcctccataattgattctacttgatgctataa 77  Q
    |||||||| |||||||||||  | || | |||||| ||||||| ||  ||||||||||||||||||| | |||||||    
T  4848281 aattgattctgacatgtttgactactctcgagtagaattgattttggttccataattgattctacttaaagctataa 4848205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 69
Target Start/End: Complemental strand, 13171865 - 13171833
Alignment:
Q  37 attgattctgcctccataattgattctacttga 69  Q
    |||||||||||||||| ||||||||||||||||    
T  13171865 attgattctgcctccaaaattgattctacttga 13171833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 35065008 - 35065081
Alignment:
Q  1 aattgattttgacatgtttggttgcttttgagtaggattgattctgcctccataattgattctacttgatgcta 74  Q
    |||||||| |||||| |||||||||||| |||||| ||||||| |||||| |||||||||| ||||||| ||||    
T  35065008 aattgattatgacatttttggttgctttcgagtagaattgattttgcctcaataattgattttacttgaagcta 35065081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 25318992 - 25319055
Alignment:
Q  1 aattgattttgacatgtttggttgcttttgagtaggattgattctgcctccataattgattcta 64  Q
    |||||||||||||||||||||||||| | |||||| ||||||| || ||||| |||||||||||    
T  25318992 aattgattttgacatgtttggttgctctcgagtagaattgattttgtctccagaattgattcta 25319055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 26617767 - 26617709
Alignment:
Q  1 aattgattttgacatgtttggttgcttttgagtaggattgattctgcctccataattga 59  Q
    ||||||||||||||||||||| ||||||| | ||| ||||||| |||||||||||||||    
T  26617767 aattgattttgacatgtttggatgcttttcaatagaattgattttgcctccataattga 26617709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 33560710 - 33560648
Alignment:
Q  2 attgattttgacatgtttggttgcttttgagtaggattgattctgcctccataattgattcta 64  Q
    ||||||||||||||||||||||||| | |||||| ||||||| |||||| | |||||||||||    
T  33560710 attgattttgacatgtttggttgctctcgagtagaattgattttgcctctagaattgattcta 33560648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 2635108 - 2635181
Alignment:
Q  1 aattgattttgacatgtttggttgcttttgagtaggattgattctgcctccataattgattctacttgatgcta 74  Q
    |||||||||||||||||||| |||||||| ||||| | ||||| |||||||| |||||||| | ||||| ||||    
T  2635108 aattgattttgacatgtttgattgcttttaagtagaactgattttgcctccagaattgattatgcttgaagcta 2635181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 11 - 81
Target Start/End: Complemental strand, 32818500 - 32818430
Alignment:
Q  11 gacatgtttggttgcttttgagtaggattgattctgcctccataattgattctacttgatgctataatttg 81  Q
    ||||| ||||||| |||| |||||| ||||||| |||||||| ||||||||||| |||| |||| ||||||    
T  32818500 gacatatttggtttctttcgagtagaattgattttgcctccagaattgattctatttgaagctagaatttg 32818430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 46344971 - 46344904
Alignment:
Q  1 aattgattttgacatgtttggttgcttttgagtaggattgattctgcctccataattgattctacttga 69  Q
    |||| ||| |||||||||||||||||||  ||||  ||||||| ||||||||||||| |||||||||||    
T  46344971 aattaattctgacatgtttggttgctttcaagtataattgattttgcctccataatt-attctacttga 46344904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 8330066 - 8330123
Alignment:
Q  7 ttttgacatgtttggttgcttttgagtaggattgattctgcctccataattgattcta 64  Q
    |||| ||||||||||||||| |  ||||  |||||||||||||||||||| |||||||    
T  8330066 tttttacatgtttggttgctctcaagtaaaattgattctgcctccataatggattcta 8330123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 22683808 - 22683864
Alignment:
Q  1 aattgattttgacatgtttggttgcttttgagtaggattgattctgcctccataatt 57  Q
    |||||||||||||||||| | ||| |||||||||  ||||||| |||||||| ||||    
T  22683808 aattgattttgacatgttggtttgtttttgagtaaaattgattttgcctccagaatt 22683864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 69
Target Start/End: Complemental strand, 39733737 - 39733709
Alignment:
Q  41 attctgcctccataattgattctacttga 69  Q
    |||||||||||||||||||||||||||||    
T  39733737 attctgcctccataattgattctacttga 39733709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 47322046 - 47321965
Alignment:
Q  1 aattgattttgacatgtttggttgcttttgagtaggattgattctgcctccataattgattctacttgatgctataatttgc 82  Q
    ||||||||||||||||||| |||| | | |||||| ||||||||||| || |||||||||| ||||||| |||| |||||||    
T  47322046 aattgattttgacatgttttgttgttgtcgagtagaattgattctgcttctataattgattatacttgaagctagaatttgc 47321965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 646127 - 646185
Alignment:
Q  3 ttgattttgacatgtttggttgcttttgagtaggattgattctgcctccataattgatt 61  Q
    |||||| ||||||||||||||| |||||||||| ||||||| |||||||| ||||||||    
T  646127 ttgattatgacatgtttggttgtttttgagtagaattgattttgcctccagaattgatt 646185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 28084028 - 28083948
Alignment:
Q  1 aattgattttgacatgtttggttgcttttgagtaggattgattctgcctccataattgattctacttgatgctataatttg 81  Q
    |||||||| |||||| |||||||| ||| |||||| ||||||| || || | ||||||||||||||||| |||| ||||||    
T  28084028 aattgattctgacatatttggttgttttcgagtagaattgattttgtcttcgtaattgattctacttgaagctagaatttg 28083948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 24587854 - 24587922
Alignment:
Q  1 aattgattttgacatgtttggttgcttttgagtaggattgattctgcctccataattgattctacttga 69  Q
    |||||||| ||||||||||||||||| |||||||| ||||| | || | ||| || |||||||||||||    
T  24587854 aattgattgtgacatgtttggttgctcttgagtagaattgactttgacgccagaactgattctacttga 24587922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 63
Target Start/End: Complemental strand, 31362330 - 31362279
Alignment:
Q  12 acatgtttggttgcttttgagtaggattgattctgcctccataattgattct 63  Q
    |||||||||||||||||   |||| ||||||| |||||||||||||||||||    
T  31362330 acatgtttggttgctttcatgtagaattgattttgcctccataattgattct 31362279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 6021749 - 6021822
Alignment:
Q  1 aattgattttgacatgtttggttgcttttgagtaggattgattctgcctccataattgattctacttgatgcta 74  Q
    |||||||||||||| ||||| ||| |||  ||||| ||||||| |||||| | ||| |||||||||||| ||||    
T  6021749 aattgattttgacaagtttgattgatttcaagtagaattgattttgcctctagaatcgattctacttgaagcta 6021822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 49824834 - 49824894
Alignment:
Q  1 aattgattttgacatgtttggttgcttttgagtaggattgattctgcctccataattgatt 61  Q
    ||||||||||||||| |||| ||||||| |||||  ||||||| || ||||| ||||||||    
T  49824834 aattgattttgacatctttgtttgctttcgagtacaattgattttggctccaaaattgatt 49824894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 31771 - 31844
Alignment:
Q  1 aattgattttgacatgtttggttgcttttgagtaggattgattctgcctccataattgattctacttgatgcta 74  Q
    |||||||| ||||||||||||||| | | |||||  |||||||||||||||| |||||||| ||||||| ||||    
T  31771 aattgattctgacatgtttggttgttgtcgagtaaaattgattctgcctccaaaattgattatacttgaagcta 31844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.000000000005; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 1441521 - 1441453
Alignment:
Q  1 aattgattttgacatgtttggttgcttttgagtaggattgattctgcctccataattgattctacttga 69  Q
    |||||| |||||||||||||||| ||||||||||| ||||||| || ||| ||||| || |||||||||    
T  1441521 aattgagtttgacatgtttggtttcttttgagtagaattgattttgtctctataatcgactctacttga 1441453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 54596763 - 54596823
Alignment:
Q  1 aattgattttgacatgtttggttgcttttgagtaggattgattctgcctccataattgatt 61  Q
    |||||||| ||||||||||||||| |||  ||||| |||||||||||||||| || |||||    
T  54596763 aattgattatgacatgtttggttgttttcaagtagaattgattctgcctccaaaaatgatt 54596823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 7717511 - 7717453
Alignment:
Q  3 ttgattttgacatgtttggttgcttttgagtaggattgattctgcctccataattgatt 61  Q
    ||||||||||||||||||||| ||   |||||| ||||||| |||||||| ||||||||    
T  7717511 ttgattttgacatgtttggttcctccagagtagaattgattttgcctccagaattgatt 7717453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 7717460 - 7717388
Alignment:
Q  1 aattgattttgacatgtttggttgcttttgagtaggattgattctgcctccataattgattctacttgatgcta 74  Q
    |||||||||||||||||| |||| |    |||||| ||||||| |||||||| |||||||||||||||| ||||    
T  7717460 aattgattttgacatgtt-ggttccgccagagtagaattgattttgcctccagaattgattctacttgaagcta 7717388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 81
Target Start/End: Complemental strand, 41115499 - 41115422
Alignment:
Q  4 tgattttgacatgtttggttgcttttgagtaggattgattctgcctccataattgattctacttgatgctataatttg 81  Q
    |||||||||||||||||| || |||  ||||| ||||||| ||| |  | |||||||||||||||| |||| ||||||    
T  41115499 tgattttgacatgtttggatgttttaaagtagaattgattttgcttgtagaattgattctacttgaagctagaatttg 41115422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 69
Target Start/End: Complemental strand, 25359678 - 25359646
Alignment:
Q  37 attgattctgcctccataattgattctacttga 69  Q
    |||||||||||||||| ||||||||||||||||    
T  25359678 attgattctgcctccagaattgattctacttga 25359646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 33548188 - 33548264
Alignment:
Q  1 aattgattttgacatgtttggttgcttttgagtaggattgattctgcctccataattgattct-acttgatgctata 76  Q
    ||||||||||||||||||||| |||| || ||||| ||||||| | ||| || ||| |||||| |||||| ||||||    
T  33548188 aattgattttgacatgtttggatgctattaagtagaattgatttttccttcaaaatggattctaacttgaagctata 33548264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 35264551 - 35264483
Alignment:
Q  1 aattgattttgacatgtttggttgcttttgagtaggattgattctgcctccataattgattctacttga 69  Q
    |||||||| | ||||||||||||||| | ||  || |||||||||||||||| |  |||||||||||||    
T  35264551 aattgattctcacatgtttggttgctctcgaagagaattgattctgcctccaaatatgattctacttga 35264483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 40736677 - 40736597
Alignment:
Q  1 aattgattttgacatgtttggttgcttttgagtaggattgattctgcctccataattgattctacttgatgctataatttg 81  Q
    ||||||||||||| |||||| ||| | | |||||  ||||||| ||| |||  ||||||||||||||||  ||||||||||    
T  40736677 aattgattttgacgtgtttgattgttgtcgagtaaaattgattttgcatccgaaattgattctacttgaaactataatttg 40736597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.000000000005; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 74
Target Start/End: Complemental strand, 680412 - 680344
Alignment:
Q  6 attttgacatgtttggttgcttttgagtaggattgattctgcctccataattgattctacttgatgcta 74  Q
    |||||||||||||| |||||||| || ||| | ||||| |||||||| |||||||||||||||| ||||    
T  680412 attttgacatgtttagttgctttcgaatagaactgattttgcctccagaattgattctacttgaagcta 680344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 31453340 - 31453408
Alignment:
Q  13 catgtttggttgcttttgagtaggattgattctgcctccataattgattctacttgatgctataatttg 81  Q
    |||||||||||| | |||||||| ||| ||| |||||| |||||||||||||||||| |||| ||||||    
T  31453340 catgtttggttgatgttgagtagaatttattttgcctctataattgattctacttgaagctaaaatttg 31453408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 7630361 - 7630412
Alignment:
Q  1 aattgattttgacatgtttggttgcttttgagtaggattgattctgcctcca 52  Q
    ||||||||||||||||||||||||||||  ||||| ||||||| ||||||||    
T  7630361 aattgattttgacatgtttggttgctttcaagtagaattgattttgcctcca 7630412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 42740922 - 42740995
Alignment:
Q  1 aattgattttgacatgtttggttgcttttgagtaggattgattctgcctccataattgattctacttgatgcta 74  Q
    ||||||||||||||||||  || ||||| || ||||| ||| | | ||||||||||||||||||||||| ||||    
T  42740922 aattgattttgacatgttccgtagctttcgaataggactgaattttcctccataattgattctacttgaagcta 42740995  T

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Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 33502989 - 33502909
Alignment:
Q  1 aattgattttgacatgtttggttgcttttgagtaggattgattctgcctccataattgattct-acttgatgctataattt 80  Q
    |||||||||||||||||||||||||| | |||||  | ||||| ||| |||| |||||||||| |||||| |||| |||||    
T  33502989 aattgattttgacatgtttggttgctctcgagtaaaactgattttgcatccagaattgattctaacttgaagctagaattt 33502909  T

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Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 69
Target Start/End: Original strand, 32777924 - 32777983
Alignment:
Q  10 tgacatgtttggttgcttttgagtaggattgattctgcctccataattgattctacttga 69  Q
    ||||||||||||||| ||| | |||| ||||||| ||||||||||||| |||| ||||||    
T  32777924 tgacatgtttggttgttttcgtgtagaattgattttgcctccataatttattcaacttga 32777983  T

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Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 36987252 - 36987189
Alignment:
Q  1 aattgattttgacatgtttggttgcttttgagtaggattgattctgcctccataattgattcta 64  Q
    ||||||||||||||||||||| | ||||||||||  ||||||| ||| |||| || ||||||||    
T  36987252 aattgattttgacatgtttggattcttttgagtataattgattttgcttccagaaatgattcta 36987189  T

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Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 15928574 - 15928532
Alignment:
Q  1 aattgattttgacatgtttggttgcttttgagtaggattgatt 43  Q
    |||||||||||||||||||||||| | |||||||| |||||||    
T  15928574 aattgattttgacatgtttggttgttgttgagtagaattgatt 15928532  T

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Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 1977005 - 1976940
Alignment:
Q  1 aattgattttgacatgtttggttgcttttgagtaggattgattctgcctccataattgattctact 66  Q
    |||||||||||||||||||| || |||   ||||| ||||||| || ||||| |||||||||||||    
T  1977005 aattgattttgacatgtttgctttcttaaaagtagaattgattttgtctccaaaattgattctact 1976940  T

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Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 2002835 - 2002762
Alignment:
Q  1 aattgattttgacatgtttggttgcttttgagtaggattgattctgcctccataattgattctacttgatgcta 74  Q
    ||||||| |||||||  |||||||||||  ||||| ||||||| |||||||| |  ||||||||||||| ||||    
T  2002835 aattgatgttgacatacttggttgctttctagtagaattgattttgcctccagacctgattctacttgaagcta 2002762  T

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Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 37420337 - 37420272
Alignment:
Q  1 aattgattttgacatgtttggttgcttttgagtaggattgattctgcctccataattgattctact 66  Q
    ||||||||||||||||||||| | |  | |||||| ||||||| |||||| | |||||||||||||    
T  37420337 aattgattttgacatgtttggcttccctagagtagaattgattttgcctctagaattgattctact 37420272  T

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Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 10644549 - 10644616
Alignment:
Q  1 aattgattttgacatgtttggttgcttttgagtaggattgattctgcctccataattgattctacttga 69  Q
    |||||| | |||||||||||  || ||| |||||| |||||||||||||||| |||| |||||||||||    
T  10644549 aattgactctgacatgtttgtctg-tttcgagtagaattgattctgcctccaaaatttattctacttga 10644616  T

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Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 43501088 - 43501132
Alignment:
Q  1 aattgattttgacatgtttggttgcttttgagtaggattgattct 45  Q
    |||||||| |||||||||||||||||||  ||||| |||||||||    
T  43501088 aattgattctgacatgtttggttgctttcaagtagaattgattct 43501132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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