View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14423_low_10 (Length: 227)
Name: NF14423_low_10
Description: NF14423
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14423_low_10 |
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Alignment Details
Target: chr8 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 2 - 221
Target Start/End: Original strand, 42695923 - 42696142
Alignment:
| Q |
2 |
cttagagggtgatacttatatagtgttattaacctttagactattagctgtcaactgtcatcttttaattaggcagttacaagtctcaactaactttcag |
101 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42695923 |
cttagagggtgatacttatatagtgttattaacctttagactattagctgtcaactgtcatcttttaattaggcagttacaagtctcaactaactttcag |
42696022 |
T |
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| Q |
102 |
tttgtcgagtttactctaatgctatcctctatcggtagtagagaggtcctgctgctttttgtgcaattgactgctgcacaattacttgctgatagtaagc |
201 |
Q |
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||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
42696023 |
tttgttgagtttactctaatgctatcctctatcggtagtagagaggtcctgctgctttttgtgcaattgactgctgcataattacttgctgatagtaagc |
42696122 |
T |
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| Q |
202 |
tatgaaattaaaggagtggg |
221 |
Q |
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|||||||||||||||||||| |
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| T |
42696123 |
tatgaaattaaaggagtggg |
42696142 |
T |
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