View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14423_low_11 (Length: 222)
Name: NF14423_low_11
Description: NF14423
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14423_low_11 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 24779456 - 24779235
Alignment:
| Q |
1 |
gatgttgaagtgtgctggtaatgatgatatcattaccattaaggctgatgatgggagtgatactgttaccttcatgtttgaaagccctagtaagtttcgt |
100 |
Q |
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|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24779456 |
gatgttgaagtgtgctggtaatgatgatatcattactattaaggctgatgatgggagtgatactgttaccttcatgtttgaaagccctagtaagtttcgt |
24779357 |
T |
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| Q |
101 |
tttctttaccaattctgtagttttagtgttaattagggttttaattgggttaattagggttttgggttcattgttgtatgattatttcgtgctacttggg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
24779356 |
tttctttaccaattctgtagttttagtgttaattagggttttaattgggttaattagggttttgggttcattgttgtatgattatttcgtgctaattggg |
24779257 |
T |
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| Q |
201 |
ttttgggttttaattgggttaa |
222 |
Q |
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|||||||||||||||||||||| |
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| T |
24779256 |
ttttgggttttaattgggttaa |
24779235 |
T |
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