View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14424_high_18 (Length: 340)
Name: NF14424_high_18
Description: NF14424
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14424_high_18 |
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Alignment Details
Target: chr6 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 26 - 269
Target Start/End: Original strand, 31420374 - 31420617
Alignment:
| Q |
26 |
aacaagaacatgtgtttccaagaaacttggaagagaattttcatggtcttgtccatcatgtcaataatcaaaatcacaatgcagttcaactttcacttcc |
125 |
Q |
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| T |
31420374 |
aacaagaacatgtgtttccaagaaacttggaagagaattttcatggtcttgtccatcatgtcaataatcaaaatcacaatgcagttcaactttcacttcc |
31420473 |
T |
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| Q |
126 |
aacaatttttcaagaagaaaataaagttcatcatgaaggtaaaaagagaaaaatgatggattttcaagagactagttctggaaattcaactcctgcagtt |
225 |
Q |
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| T |
31420474 |
aacaatttttcaagaagaaaataaagttcatcatgaaggtaaaaagagaaaaatgatggattttcaagagactagttctggaaattcaactcctgcagtt |
31420573 |
T |
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| Q |
226 |
tctgaaagtggaagcaaaaccaaacttgtaaatttcttctactt |
269 |
Q |
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| T |
31420574 |
tctgaaagtggaagcaaaaccaaacttgtaaatttcttctactt |
31420617 |
T |
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