View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14424_low_31 (Length: 204)
Name: NF14424_low_31
Description: NF14424
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14424_low_31 |
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Alignment Details
Target: chr8 (Bit Score: 136; Significance: 4e-71; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 28437452 - 28437632
Alignment:
| Q |
1 |
gtagaaagaaacaaaaactcaaacactcatctacaccatctcaagccattaataagtactctacttcaccttctcttgattttcatcttggttctttac- |
99 |
Q |
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| T |
28437452 |
gtagaaagaaacaaaaactcaaacactcatctacaccatctcaagccattaataagtactctacttcaccttctcttgattttcatcttggttctttacc |
28437551 |
T |
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| Q |
100 |
-----------ccttacctttctcttcaaaaccattttactataaccaattttcttccattggtggagtttcaagttcaaa |
169 |
Q |
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|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
28437552 |
cttacctttatccttacctttctcttcaaaaccattttactataaccaattctcttccattggtggagtttcaagttcaaa |
28437632 |
T |
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