View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14424_low_6 (Length: 547)

Name: NF14424_low_6
Description: NF14424
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14424_low_6
NF14424_low_6
[»] chr1 (28 HSPs)
chr1 (284-547)||(34644254-34644520)
chr1 (7-216)||(34643977-34644188)
chr1 (439-547)||(5453941-5454049)
chr1 (442-547)||(48841235-48841340)
chr1 (440-545)||(47459530-47459634)
chr1 (460-547)||(22346762-22346849)
chr1 (483-547)||(28493484-28493548)
chr1 (460-547)||(30688424-30688511)
chr1 (460-539)||(31737483-31737562)
chr1 (460-541)||(868560-868641)
chr1 (460-545)||(1114023-1114108)
chr1 (460-540)||(19035346-19035426)
chr1 (486-545)||(2764372-2764431)
chr1 (460-547)||(24177664-24177751)
chr1 (486-547)||(2898595-2898656)
chr1 (478-547)||(28041280-28041349)
chr1 (506-547)||(45835339-45835380)
chr1 (474-541)||(21934258-21934325)
chr1 (485-545)||(20259952-20260012)
chr1 (150-216)||(44359755-44359821)
chr1 (478-547)||(4611074-4611143)
chr1 (460-533)||(7213110-7213183)
chr1 (494-547)||(21472904-21472957)
chr1 (156-216)||(14331800-14331860)
chr1 (150-205)||(31366987-31367042)
chr1 (19-77)||(15536316-15536374)
chr1 (494-547)||(7483785-7483838)
chr1 (19-79)||(23930328-23930388)
[»] chr4 (36 HSPs)
chr4 (440-547)||(53619433-53619540)
chr4 (440-545)||(50001081-50001186)
chr4 (440-547)||(23255560-23255667)
chr4 (440-547)||(3329843-3329950)
chr4 (441-547)||(55933613-55933719)
chr4 (460-547)||(39001264-39001351)
chr4 (449-547)||(4419120-4419217)
chr4 (460-547)||(30940885-30940972)
chr4 (452-547)||(31846962-31847057)
chr4 (468-547)||(50464449-50464528)
chr4 (443-547)||(48657068-48657170)
chr4 (460-531)||(40392723-40392794)
chr4 (455-541)||(12053329-12053415)
chr4 (454-544)||(26521350-26521440)
chr4 (440-528)||(12917896-12917984)
chr4 (439-515)||(41372253-41372329)
chr4 (466-547)||(53170386-53170466)
chr4 (460-531)||(23604957-23605028)
chr4 (460-547)||(8738072-8738159)
chr4 (485-544)||(50442635-50442694)
chr4 (478-541)||(50463102-50463165)
chr4 (21-79)||(5472595-5472653)
chr4 (460-545)||(600847-600932)
chr4 (458-547)||(2852300-2852389)
chr4 (506-547)||(16955373-16955414)
chr4 (284-324)||(32884966-32885006)
chr4 (173-216)||(23691005-23691048)
chr4 (466-541)||(47585167-47585242)
chr4 (506-540)||(9601122-9601156)
chr4 (485-547)||(34107849-34107911)
chr4 (170-216)||(46823449-46823495)
chr4 (171-216)||(39158412-39158457)
chr4 (507-547)||(1041339-1041379)
chr4 (164-216)||(13966530-13966582)
chr4 (505-545)||(49354225-49354265)
chr4 (171-215)||(52341579-52341623)
[»] chr3 (28 HSPs)
chr3 (440-547)||(26772605-26772712)
chr3 (440-547)||(38671033-38671140)
chr3 (454-547)||(39583382-39583475)
chr3 (460-547)||(32546662-32546749)
chr3 (460-547)||(53785576-53785663)
chr3 (497-547)||(26276519-26276569)
chr3 (483-547)||(37133152-37133216)
chr3 (460-543)||(44700-44783)
chr3 (499-546)||(5338552-5338599)
chr3 (460-547)||(44198634-44198721)
chr3 (460-547)||(46940926-46941013)
chr3 (460-547)||(49017834-49017921)
chr3 (485-547)||(4669816-4669878)
chr3 (485-547)||(26856915-26856977)
chr3 (498-547)||(13582415-13582464)
chr3 (497-547)||(26393839-26393889)
chr3 (174-216)||(45899630-45899672)
chr3 (486-529)||(8592034-8592077)
chr3 (500-547)||(35484833-35484880)
chr3 (176-214)||(17073153-17073191)
chr3 (486-547)||(3376891-3376952)
chr3 (506-547)||(3443465-3443506)
chr3 (505-538)||(23535180-23535213)
chr3 (506-547)||(32691019-32691060)
chr3 (451-536)||(50657235-50657320)
chr3 (515-547)||(2601751-2601783)
chr3 (287-323)||(51256053-51256089)
chr3 (505-541)||(52412050-52412086)
[»] chr6 (19 HSPs)
chr6 (440-547)||(17249458-17249565)
chr6 (440-547)||(7749328-7749435)
chr6 (444-547)||(33220864-33220967)
chr6 (451-547)||(357869-357965)
chr6 (460-547)||(34168788-34168874)
chr6 (496-547)||(34304399-34304450)
chr6 (505-547)||(3137400-3137442)
chr6 (489-547)||(28625827-28625885)
chr6 (497-547)||(32115622-32115672)
chr6 (500-547)||(34554429-34554476)
chr6 (505-547)||(959493-959535)
chr6 (440-506)||(32531042-32531108)
chr6 (173-216)||(12226417-12226460)
chr6 (173-216)||(26539092-26539135)
chr6 (460-547)||(28009140-28009227)
chr6 (485-547)||(29338232-29338294)
chr6 (149-194)||(29319077-29319122)
chr6 (287-327)||(13000224-13000264)
chr6 (454-538)||(28543258-28543342)
[»] chr7 (36 HSPs)
chr7 (452-547)||(45003050-45003145)
chr7 (460-547)||(21326991-21327078)
chr7 (440-547)||(28517440-28517547)
chr7 (466-547)||(45613995-45614076)
chr7 (440-544)||(5825120-5825224)
chr7 (441-527)||(38766172-38766258)
chr7 (455-547)||(40726633-40726725)
chr7 (441-516)||(38832150-38832225)
chr7 (460-547)||(45974752-45974839)
chr7 (466-547)||(982822-982903)
chr7 (440-516)||(36931887-36931962)
chr7 (486-547)||(24527482-24527543)
chr7 (506-547)||(48539094-48539135)
chr7 (507-547)||(27521385-27521425)
chr7 (19-79)||(37526472-37526532)
chr7 (460-547)||(25187084-25187171)
chr7 (485-547)||(41117923-41117986)
chr7 (21-76)||(45235037-45235092)
chr7 (505-547)||(23037457-23037499)
chr7 (497-547)||(27027783-27027833)
chr7 (506-547)||(5972369-5972410)
chr7 (460-545)||(9281291-9281376)
chr7 (460-545)||(9292262-9292347)
chr7 (494-547)||(32584501-32584554)
chr7 (152-213)||(44296990-44297051)
chr7 (150-214)||(35003563-35003626)
chr7 (460-547)||(2904248-2904334)
chr7 (460-547)||(4501126-4501213)
chr7 (489-527)||(19277187-19277225)
chr7 (505-547)||(22197899-22197941)
chr7 (505-547)||(22239880-22239922)
chr7 (501-547)||(38839234-38839280)
chr7 (501-547)||(41071754-41071800)
chr7 (504-545)||(32336318-32336359)
chr7 (494-546)||(34856766-34856818)
chr7 (507-547)||(43856788-43856828)
[»] chr5 (24 HSPs)
chr5 (442-547)||(430451-430556)
chr5 (442-536)||(2917524-2917619)
chr5 (440-547)||(27336542-27336649)
chr5 (439-547)||(35310294-35310402)
chr5 (485-545)||(2566250-2566310)
chr5 (451-547)||(33692207-33692301)
chr5 (451-547)||(13167063-13167159)
chr5 (442-547)||(25663185-25663290)
chr5 (486-541)||(42921591-42921646)
chr5 (21-79)||(14913591-14913649)
chr5 (485-546)||(15506769-15506830)
chr5 (494-547)||(23023496-23023549)
chr5 (468-537)||(23092694-23092763)
chr5 (507-547)||(15292178-15292218)
chr5 (507-547)||(32269950-32269990)
chr5 (485-540)||(11005770-11005825)
chr5 (497-547)||(37873791-37873841)
chr5 (500-547)||(22188808-22188855)
chr5 (21-79)||(28234659-28234717)
chr5 (484-545)||(8100445-8100505)
chr5 (508-545)||(12033346-12033383)
chr5 (287-327)||(3241928-3241968)
chr5 (497-541)||(14423591-14423635)
chr5 (460-540)||(35455841-35455921)
[»] chr8 (28 HSPs)
chr8 (440-547)||(39434516-39434621)
chr8 (460-543)||(18804480-18804563)
chr8 (440-547)||(42659074-42659181)
chr8 (460-547)||(22589489-22589576)
chr8 (460-547)||(38815161-38815248)
chr8 (460-540)||(18596759-18596839)
chr8 (460-547)||(24320204-24320291)
chr8 (501-547)||(3187878-3187924)
chr8 (485-547)||(8882236-8882298)
chr8 (485-547)||(37514113-37514175)
chr8 (171-216)||(5300201-5300246)
chr8 (19-79)||(38828967-38829027)
chr8 (496-547)||(6592479-6592530)
chr8 (451-522)||(44337198-44337268)
chr8 (505-547)||(500154-500196)
chr8 (485-547)||(4699763-4699825)
chr8 (460-542)||(24350880-24350962)
chr8 (152-213)||(20212478-20212539)
chr8 (462-546)||(25021968-25022052)
chr8 (150-216)||(22575767-22575834)
chr8 (19-77)||(23690246-23690304)
chr8 (486-547)||(6618178-6618239)
chr8 (486-547)||(8227988-8228049)
chr8 (460-545)||(8619689-8619774)
chr8 (284-325)||(35973863-35973904)
chr8 (507-547)||(4073448-4073488)
chr8 (505-545)||(5329757-5329797)
chr8 (507-547)||(9259445-9259485)
[»] chr2 (27 HSPs)
chr2 (447-547)||(27494165-27494265)
chr2 (440-547)||(28224847-28224954)
chr2 (460-547)||(4413219-4413306)
chr2 (460-547)||(17344505-17344592)
chr2 (460-538)||(3208406-3208484)
chr2 (485-547)||(9685568-9685630)
chr2 (489-547)||(18745107-18745165)
chr2 (150-216)||(41890197-41890263)
chr2 (460-545)||(15515302-15515387)
chr2 (460-547)||(13413218-13413305)
chr2 (500-547)||(27502269-27502316)
chr2 (460-547)||(41868061-41868147)
chr2 (460-539)||(42122684-42122763)
chr2 (460-546)||(2626001-2626087)
chr2 (460-534)||(30602356-30602430)
chr2 (466-522)||(20143123-20143179)
chr2 (454-530)||(41702133-41702209)
chr2 (468-547)||(11921357-11921436)
chr2 (21-79)||(19905531-19905589)
chr2 (157-216)||(2136400-2136459)
chr2 (440-507)||(38723985-38724052)
chr2 (21-79)||(31938120-31938178)
chr2 (440-534)||(34250153-34250247)
chr2 (498-547)||(26407847-26407896)
chr2 (172-213)||(34392637-34392678)
chr2 (156-216)||(12695324-12695383)
chr2 (160-216)||(19851639-19851695)
[»] scaffold0009 (1 HSPs)
scaffold0009 (460-547)||(102973-103060)
[»] scaffold0309 (1 HSPs)
scaffold0309 (460-545)||(5191-5276)
[»] scaffold0406 (1 HSPs)
scaffold0406 (460-542)||(6755-6837)
[»] scaffold0148 (1 HSPs)
scaffold0148 (460-539)||(33117-33196)
[»] scaffold0244 (1 HSPs)
scaffold0244 (497-547)||(16807-16857)
[»] scaffold1768 (1 HSPs)
scaffold1768 (460-547)||(337-424)
[»] scaffold0221 (1 HSPs)
scaffold0221 (21-104)||(6663-6746)
[»] scaffold0144 (1 HSPs)
scaffold0144 (173-216)||(39569-39612)
[»] scaffold0031 (1 HSPs)
scaffold0031 (485-547)||(49307-49369)
[»] scaffold0470 (1 HSPs)
scaffold0470 (486-547)||(7496-7557)


Alignment Details
Target: chr1 (Bit Score: 168; Significance: 9e-90; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 168; E-Value: 9e-90
Query Start/End: Original strand, 284 - 547
Target Start/End: Original strand, 34644254 - 34644520
Alignment:
Q  284 tcttcttaatcaatgttctaaggacactctttagcatttctcattttttaatgcaaagagaata---caaataagtttcttagtacttcttttatttatc 380  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||   ||||| |||||||||||||||||||||| ||||    
T  34644254 tcttcttaatcaatgtcctaaggacactctttaacatttctcattttttaatgcaaagagaataatacaaatcagtttcttagtacttcttttatctatc 34644353  T
Q  381 ccttccatgcattcacattcaaaactgacaatataaaattaaatatannnnnnnattgttatttactattaatattacatacacatgaataggaggtaag 480  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||       ||| ||||||||||| ||||||| ||| |||| |||||||||||||    
T  34644354 ccttccatgcattcacattcaaaattgacaatataaaattaaatatatttctttattattatttactatcaatattatatatacataaataggaggtaag 34644453  T
Q  481 cagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    | | |||||| | |||||||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  34644454 cgggcaacaaactgcgccgctagacttttttggatggcaaaatcaatcatcgtaaacacaacattca 34644520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 7 - 216
Target Start/End: Original strand, 34643977 - 34644188
Alignment:
Q  7 ctctccattaataattttctcaagtgaaatttcaactatcaaacacgagagagaaaataagaattaaattatagagaaacatggttgat--gtgttttaa 104  Q
    |||||||||||||||||||||||||||||| |||||||||||||| || |||||||||||||||||||||||| ||||||||| |||||  |||||||||    
T  34643977 ctctccattaataattttctcaagtgaaatctcaactatcaaacatgaaagagaaaataagaattaaattataaagaaacatgattgatatgtgttttaa 34644076  T
Q  105 atctttaatggaagaaattgaaaatggagaaaaattgagaaattttaacaagtgcccttagggcttttgttaaggaaaccaaaactagtaagtttacatt 204  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  34644077 atctttagttgaagaaattgaaaatggagaaaaattgagaaattttaacaattgcccttagggcttttgttaaggaaaccaaaactactaagtttacatt 34644176  T
Q  205 gaattcaacaat 216  Q
    ||||||||||||    
T  34644177 gaattcaacaat 34644188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 439 - 547
Target Start/End: Original strand, 5453941 - 5454049
Alignment:
Q  439 ttatttactattaatattacatacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaaca 538  Q
    ||||||||||| |||||||| ||||||||||||||||| |||| | |||||||| ||||||||||||||||||||||| ||||| ||||||| |||||||    
T  5453941 ttatttactatcaatattacttacacatgaataggaggcaagcgggcaacaagctgcgccgctagacctttttggatgacaaaaccaatccttgtaaaca 5454040  T
Q  539 caacattca 547  Q
    |||||||||    
T  5454041 caacattca 5454049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 442 - 547
Target Start/End: Complemental strand, 48841340 - 48841235
Alignment:
Q  442 tttactattaatattacatacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaa 541  Q
    ||||||||||||||||| |||||||||||| ||||||||| |||||||||  |||| ||||||| ||||||||| |||||||||||||||||||||| ||    
T  48841340 tttactattaatattacttacacatgaatatgaggtaagcggacaacaagttgcgctgctagacttttttggattgcaaaatcaatcctcgtaaacataa 48841241  T
Q  542 cattca 547  Q
     |||||    
T  48841240 tattca 48841235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 440 - 545
Target Start/End: Original strand, 47459530 - 47459634
Alignment:
Q  440 tatttactattaatattacatacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacac 539  Q
    ||||||| || |||||| | ||||||||||||||||  ||||||||||||||| |||| |||||||||||||| ||||| |||||||| |||||||||||    
T  47459530 tatttacgatcaatattccttacacatgaataggagccaagcagacaacaagctgcgc-gctagacctttttgaatggctaaatcaattctcgtaaacac 47459628  T
Q  540 aacatt 545  Q
    ||||||    
T  47459629 aacatt 47459634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 460 - 547
Target Start/End: Original strand, 22346762 - 22346849
Alignment:
Q  460 tacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    ||||| ||||||| ||| |||| |||||||||| |||||||||||||||||||||||||||||  ||||||||| |||||||||||||    
T  22346762 tacacttgaatagaaggcaagcggacaacaagctgcgccgctagacctttttggatggcaaaactaatcctcgtgaacacaacattca 22346849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 483 - 547
Target Start/End: Complemental strand, 28493548 - 28493484
Alignment:
Q  483 gacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  28493548 gacaacaaactgcgccgctagacctttttggatggcaaaatcaatcctcgtgaacataacattca 28493484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 460 - 547
Target Start/End: Original strand, 30688424 - 30688511
Alignment:
Q  460 tacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    |||||||||||||  || |||| | |||||||| |||||||||| |||||||||||  ||||| ||||||||||||||||||||||||    
T  30688424 tacacatgaatagatggcaagcgggcaacaagctgcgccgctaggcctttttggataacaaaaccaatcctcgtaaacacaacattca 30688511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 460 - 539
Target Start/End: Complemental strand, 31737562 - 31737483
Alignment:
Q  460 tacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacac 539  Q
    ||||| ||||||| ||| || |||||||||||| ||||||| |  |||||||||||||||||||||||||||||||||||    
T  31737562 tacacttgaatagaaggcaaacagacaacaagctgcgccgccaagcctttttggatggcaaaatcaatcctcgtaaacac 31737483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 460 - 541
Target Start/End: Complemental strand, 868641 - 868560
Alignment:
Q  460 tacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaa 541  Q
    ||||| ||||||| ||| |||| | |||||||| ||||||||||||||||||||||||||||| ||||||| || |||||||    
T  868641 tacacttgaatagaaggcaagcgggcaacaagctgcgccgctagacctttttggatggcaaaaccaatccttgtgaacacaa 868560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 460 - 545
Target Start/End: Complemental strand, 1114108 - 1114023
Alignment:
Q  460 tacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacatt 545  Q
    ||||| ||||||| ||  |||| | |||||||| | |||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  1114108 tacacttgaatagaagccaagcgggcaacaagctgtgccgttagacctttttggatggcaaaaccaatcctcgtaaacacaacatt 1114023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 460 - 540
Target Start/End: Original strand, 19035346 - 19035426
Alignment:
Q  460 tacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacaca 540  Q
    ||||| ||||||| ||| || | |||||||||| ||||||||||||||||||||||| ||||| |||||||||| ||||||    
T  19035346 tacacttgaatagaaggcaatcggacaacaagctgcgccgctagacctttttggatgacaaaaccaatcctcgtgaacaca 19035426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 486 - 545
Target Start/End: Original strand, 2764372 - 2764431
Alignment:
Q  486 aacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacatt 545  Q
    ||||||| ||||||||| |||||||||||||| |||||||||| ||||||||||||||||    
T  2764372 aacaagctgcgccgctaaacctttttggatggtaaaatcaatcatcgtaaacacaacatt 2764431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 460 - 547
Target Start/End: Complemental strand, 24177751 - 24177664
Alignment:
Q  460 tacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    ||||| ||||||| ||  |||| | |||||||| || ||||||||||||||||| |||||||| |||||||||| |||||||||||||    
T  24177751 tacacttgaatagaagacaagcgggcaacaagctgcaccgctagacctttttggttggcaaaaccaatcctcgtgaacacaacattca 24177664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 486 - 547
Target Start/End: Original strand, 2898595 - 2898656
Alignment:
Q  486 aacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    |||||||  ||||||||  ||||||||||||||||||||||||||| |||||||||||||||    
T  2898595 aacaagctacgccgctaagcctttttggatggcaaaatcaatcctcttaaacacaacattca 2898656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 478 - 547
Target Start/End: Complemental strand, 28041349 - 28041280
Alignment:
Q  478 aagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    |||| ||||||||||  ||||||||||||||||||||||| ||||||||||||| | | |||||||||||    
T  28041349 aagcggacaacaagctccgccgctagacctttttggatggaaaaatcaatcctcatgagcacaacattca 28041280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 506 - 547
Target Start/End: Complemental strand, 45835380 - 45835339
Alignment:
Q  506 ctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  45835380 ctttttggatggcaaaatcaatcctcgtaaacacaacattca 45835339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 474 - 541
Target Start/End: Original strand, 21934258 - 21934325
Alignment:
Q  474 aggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaa 541  Q
    |||||||||| |||||||| |||||||||  |||||||||||||||||| |||||||| |||| ||||    
T  21934258 aggtaagcaggcaacaagctgcgccgctaaccctttttggatggcaaaaccaatcctcttaaatacaa 21934325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 485 - 545
Target Start/End: Complemental strand, 20260012 - 20259952
Alignment:
Q  485 caacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacatt 545  Q
    |||||| | ||||||||||||||||||||||||||||| ||||||   |||||||||||||    
T  20260012 caacaaactgcgccgctagacctttttggatggcaaaaccaatccatataaacacaacatt 20259952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 150 - 216
Target Start/End: Complemental strand, 44359821 - 44359755
Alignment:
Q  150 taacaagtgcccttagggcttttgttaaggaaaccaaaactagtaagtttacattgaattcaacaat 216  Q
    |||| |||||||| |||||  | |||||||||||||||| |||||  ||||||||||||||||||||    
T  44359821 taactagtgccctcagggcaatggttaaggaaaccaaaaatagtatatttacattgaattcaacaat 44359755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 478 - 547
Target Start/End: Original strand, 4611074 - 4611143
Alignment:
Q  478 aagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    |||| |||||||||| | || | |||||||||||||||| ||||||||||| |||| ||||||| |||||    
T  4611074 aagcggacaacaagctgtgctgttagacctttttggatgacaaaatcaatcatcgtgaacacaatattca 4611143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 460 - 533
Target Start/End: Original strand, 7213110 - 7213183
Alignment:
Q  460 tacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgt 533  Q
    ||||| ||||||| ||| |||| | |||||||  |||||||||||||||||||||||| |||| ||||| ||||    
T  7213110 tacacttgaatagaaggcaagcgggcaacaagttgcgccgctagacctttttggatggtaaaaccaatcatcgt 7213183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 494 - 547
Target Start/End: Original strand, 21472904 - 21472957
Alignment:
Q  494 gcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    ||||||||||||||||||||||||||||| || ||||| | ||| |||||||||    
T  21472904 gcgccgctagacctttttggatggcaaaaccagtcctcctgaacgcaacattca 21472957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 156 - 216
Target Start/End: Original strand, 14331800 - 14331860
Alignment:
Q  156 gtgcccttagggcttttgttaaggaaaccaaaactagtaagtttacattgaattcaacaat 216  Q
    ||||||| |||||  | |||||||||||||||| |||||  ||||||||||||||||||||    
T  14331800 gtgccctcagggcaatggttaaggaaaccaaaaatagtatatttacattgaattcaacaat 14331860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 150 - 205
Target Start/End: Complemental strand, 31367042 - 31366987
Alignment:
Q  150 taacaagtgcccttagggcttttgttaaggaaaccaaaactagtaagtttacattg 205  Q
    ||||||||||||||| | | |||||||||||||| |||| |||||| |||||||||    
T  31367042 taacaagtgcccttaagacatttgttaaggaaacaaaaaatagtaactttacattg 31366987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 15536374 - 15536316
Alignment:
Q  19 aattttctcaagtgaaatttcaactatcaaacacgagagagaaaataagaattaaatta 77  Q
    |||||||||||||| ||| ||||| || ||||| |||||||||| | ||||||||||||    
T  15536374 aattttctcaagtggaatctcaacaattaaacatgagagagaaattgagaattaaatta 15536316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 494 - 547
Target Start/End: Original strand, 7483785 - 7483838
Alignment:
Q  494 gcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    |||||||||  ||||||| ||||||||||  |||| ||||||||||||||||||    
T  7483785 gcgccgctaagcctttttagatggcaaaactaatcttcgtaaacacaacattca 7483838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 23930328 - 23930388
Alignment:
Q  19 aattttctcaagtgaaatttcaactatcaaacacgagagagaaaataagaattaaattata 79  Q
    |||||||| ||||  ||| ||||| |||||| | |||||||||||| ||||||||||||||    
T  23930328 aattttcttaagtagaatctcaaccatcaaatatgagagagaaaatgagaattaaattata 23930388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 80; Significance: 3e-37; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 440 - 547
Target Start/End: Original strand, 53619433 - 53619540
Alignment:
Q  440 tatttactattaatattacatacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacac 539  Q
    |||||||||| |||||||| ||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||| |||| |||||||||||    
T  53619433 tatttactatcaatattacttacacatgaataggaggtaagtaggcaacaagctgcgccgctagacctttttggatggcaaaaccaattctcgtaaacac 53619532  T
Q  540 aacattca 547  Q
    ||||||||    
T  53619533 aacattca 53619540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 440 - 545
Target Start/End: Complemental strand, 50001186 - 50001081
Alignment:
Q  440 tatttactattaatattacatacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacac 539  Q
    ||||||||||||||||||| ||||||||||||||||| |||| | |||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||    
T  50001186 tatttactattaatattacttacacatgaataggaggcaagcgggcaacaagctgcgccgctagatctttttggatggcaaaatcaatcttcgtaaacac 50001087  T
Q  540 aacatt 545  Q
    ||||||    
T  50001086 aacatt 50001081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 440 - 547
Target Start/End: Original strand, 23255560 - 23255667
Alignment:
Q  440 tatttactattaatattacatacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacac 539  Q
    |||||||||| ||||||||  ||| ||||||||||||||||| |||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||    
T  23255560 tatttactatcaatattactcacatatgaataggaggtaagcggacaacaagctgcgccgctagacttttctggatggcaaaatcaatcctcgtaaacac 23255659  T
Q  540 aacattca 547  Q
    || |||||    
T  23255660 aatattca 23255667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 440 - 547
Target Start/End: Original strand, 3329843 - 3329950
Alignment:
Q  440 tatttactattaatattacatacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacac 539  Q
    |||||||||| |||||||| ||||| ||||||||||| |||| | |||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||    
T  3329843 tatttactatcaatattacttacacgtgaataggaggcaagcgggcaacaagctgcgccgctagacctttttggatggcaaaaccaatcatcgtaaacac 3329942  T
Q  540 aacattca 547  Q
    | ||||||    
T  3329943 agcattca 3329950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 441 - 547
Target Start/End: Complemental strand, 55933719 - 55933613
Alignment:
Q  441 atttactattaatattacatacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacaca 540  Q
    ||||| ||| |||||||| | ||||||||||||||| |||| |||||||| | ||| |||||||| |||||||||||||||||||||| |||||||||||    
T  55933719 atttaatatcaatattacttgcacatgaataggaggcaagcggacaacaaactgcgtcgctagacttttttggatggcaaaatcaatcatcgtaaacaca 55933620  T
Q  541 acattca 547  Q
    |||||||    
T  55933619 acattca 55933613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 460 - 547
Target Start/End: Original strand, 39001264 - 39001351
Alignment:
Q  460 tacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    ||||||||||||||||| |||| | |||||| | ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  39001264 tacacatgaataggaggcaagcgggcaacaaactgcgccgctagacctttttggatgacaaaaccaatcctcgtaaacacaacattca 39001351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 449 - 547
Target Start/End: Original strand, 4419120 - 4419217
Alignment:
Q  449 ttaatattacatacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    |||||||||| | ||||||||||||||| |||| | |||||||| |||||||||||  |||||||||||||||| ||||| ||||||||||||||||||    
T  4419120 ttaatattacttgcacatgaataggaggcaagcgggcaacaagctgcgccgctagat-tttttggatggcaaaaccaatcatcgtaaacacaacattca 4419217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 460 - 547
Target Start/End: Complemental strand, 30940972 - 30940885
Alignment:
Q  460 tacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    ||||| ||||||| ||| |||| | |||||||| ||| |||||||||||||||||||||||||||||||||| | |||||||||||||    
T  30940972 tacacttgaatagaaggcaagcgggcaacaagctgcgtcgctagacctttttggatggcaaaatcaatcctcatgaacacaacattca 30940885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 452 - 547
Target Start/End: Original strand, 31846962 - 31847057
Alignment:
Q  452 atattacatacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    ||||||| ||||||||||||||||| |||| | |||||| | |||||||||||||||||||||||||| ||  ||||||||  |||||||||||||    
T  31846962 atattacttacacatgaataggaggcaagcgggcaacaacctgcgccgctagacctttttggatggcataacgaatcctcgctaacacaacattca 31847057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 468 - 547
Target Start/End: Complemental strand, 50464528 - 50464449
Alignment:
Q  468 aataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    ||||| ||| |||| |||||||||| ||||||||||  |||||||||||||||||| |||||||||||||||||||||||    
T  50464528 aatagaaggcaagcggacaacaagctgcgccgctaggtctttttggatggcaaaataaatcctcgtaaacacaacattca 50464449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 443 - 547
Target Start/End: Complemental strand, 48657170 - 48657068
Alignment:
Q  443 ttactattaatattacatacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaac 542  Q
    ||||||| |||||||| || |||||||||||||  |||||| ||||||||| |  | ||||| ||||||||| ||||||||||||| |||||||||||||    
T  48657170 ttactatcaatattacttatacatgaataggagccaagcaggcaacaagccac--cactagatctttttggacggcaaaatcaatcatcgtaaacacaac 48657073  T
Q  543 attca 547  Q
    |||||    
T  48657072 attca 48657068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 460 - 531
Target Start/End: Complemental strand, 40392794 - 40392723
Alignment:
Q  460 tacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctc 531  Q
    ||||| ||||||| ||| |||| |||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  40392794 tacacttgaatagaaggcaagcggacaacaagctgcgccgctagacctttttggatggcaaaaccaatcctc 40392723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 455 - 541
Target Start/End: Original strand, 12053329 - 12053415
Alignment:
Q  455 ttacatacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaa 541  Q
    |||| ||||||||||||| ||| ||||||||||||||| ||| |||| | ||||||| |||||||||| |||| |||||||||||||    
T  12053329 ttacttacacatgaatagaaggcaagcagacaacaagctgcgtcgctcggcctttttcgatggcaaaaccaattctcgtaaacacaa 12053415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 454 - 544
Target Start/End: Original strand, 26521350 - 26521440
Alignment:
Q  454 attacatacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacat 544  Q
    ||||| |||||||| |||| ||| |||| ||||| |||| | ||||||| ||||||||||||| ||||| |||||||||||||||||||||    
T  26521350 attacttacacatggatagaaggcaagcggacaaaaagctgtgccgctaaacctttttggatgacaaaaccaatcctcgtaaacacaacat 26521440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 440 - 528
Target Start/End: Original strand, 12917896 - 12917984
Alignment:
Q  440 tatttactattaatattacatacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatc 528  Q
    |||||||||| |||||||| ||| |||||||| |||| |||||||||| |||  | |||| |||||||||||||||| |||||||||||    
T  12917896 tatttactatcaatattacttactcatgaataagaggcaagcagacaataagttgtgccgttagacctttttggatgacaaaatcaatc 12917984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 439 - 515
Target Start/End: Complemental strand, 41372329 - 41372253
Alignment:
Q  439 ttatttactattaatattacatacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggat 515  Q
    |||||| |||| |||||||| ||||||||||||||||| ||||||||||||||  |||| ||||||||||| |||||    
T  41372329 ttattttctatcaatattacttacacatgaataggaggcaagcagacaacaagttgcgctgctagacctttgtggat 41372253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 466 - 547
Target Start/End: Original strand, 53170386 - 53170466
Alignment:
Q  466 tgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    ||||||| ||| |||||||||||| || || | ||||||||||||| ||| ||||||||||||||||| |||||||||||||    
T  53170386 tgaatagaaggcaagcagacaaca-gctgcactgctagacctttttagatagcaaaatcaatcctcgtgaacacaacattca 53170466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 460 - 531
Target Start/End: Original strand, 23604957 - 23605028
Alignment:
Q  460 tacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctc 531  Q
    ||||||||||||| ||  || | |||||||||  ||||||||||||||||||||||| ||||||||||||||    
T  23604957 tacacatgaatagaagacaaccggacaacaagttgcgccgctagacctttttggatgacaaaatcaatcctc 23605028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 460 - 547
Target Start/End: Original strand, 8738072 - 8738159
Alignment:
Q  460 tacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    |||||||||||   |||||||| || ||||| | ||||||||| || |||||||||| ||||||||||| | ||| ||||||||||||    
T  8738072 tacacatgaatgaaaggtaagcggataacaaactgcgccgctaaacttttttggatgacaaaatcaatctttgtatacacaacattca 8738159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 485 - 544
Target Start/End: Complemental strand, 50442694 - 50442635
Alignment:
Q  485 caacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacat 544  Q
    |||||||| ||||| |||  |||||||||||||||||| |||||||| ||||||||||||    
T  50442694 caacaagctgcgccactaaccctttttggatggcaaaaccaatcctcttaaacacaacat 50442635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 478 - 541
Target Start/End: Complemental strand, 50463165 - 50463102
Alignment:
Q  478 aagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaa 541  Q
    |||| |||| ||||| ||||||||||  |||||||||||||||||  |||||||||||||||||    
T  50463165 aagcggacagcaagctgcgccgctaggtctttttggatggcaaaacaaatcctcgtaaacacaa 50463102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 5472595 - 5472653
Alignment:
Q  21 ttttctcaagtgaaatttcaactatcaaacacgagagagaaaataagaattaaattata 79  Q
    |||||||||||||||| ||||  |||||||| |||||||||| | ||||||||||||||    
T  5472595 ttttctcaagtgaaatctcaatcatcaaacatgagagagaaagtgagaattaaattata 5472653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 460 - 545
Target Start/End: Complemental strand, 600932 - 600847
Alignment:
Q  460 tacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacatt 545  Q
    ||||| ||||||| ||| |||| ||||||||||  || ||||| || ||||||||||||||||  |||| ||||||||||| ||||    
T  600932 tacacttgaatagaaggcaagcggacaacaagctacgtcgctatacatttttggatggcaaaactaatcatcgtaaacacagcatt 600847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 458 - 547
Target Start/End: Original strand, 2852300 - 2852389
Alignment:
Q  458 catacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    |||| |||||||| | |||||| ||| |||||||| |||||||||  |||||||| |||  |||| ||||||| || |||||||||||||    
T  2852300 catatacatgaatggaaggtaatcaggcaacaagctgcgccgctaagcctttttgaatgaaaaaaccaatccttgtgaacacaacattca 2852389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 506 - 547
Target Start/End: Original strand, 16955373 - 16955414
Alignment:
Q  506 ctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    |||||| |||||| ||||||||||||||||||||||||||||    
T  16955373 cttttttgatggccaaatcaatcctcgtaaacacaacattca 16955414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 284 - 324
Target Start/End: Complemental strand, 32885006 - 32884966
Alignment:
Q  284 tcttcttaatcaatgttctaaggacactctttagcatttct 324  Q
    |||||||||||||||| |||||||||||||||| |||||||    
T  32885006 tcttcttaatcaatgtcctaaggacactctttaacatttct 32884966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 216
Target Start/End: Complemental strand, 23691048 - 23691005
Alignment:
Q  173 gttaaggaaaccaaaactagtaagtttacattgaattcaacaat 216  Q
    |||||||||||||||| |||||  ||||||||||||||||||||    
T  23691048 gttaaggaaaccaaaaatagtatatttacattgaattcaacaat 23691005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 466 - 541
Target Start/End: Complemental strand, 47585242 - 47585167
Alignment:
Q  466 tgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaa 541  Q
    ||||||| ||| || |||||||||| |  |||||||| |||||||| |||| ||||| ||||| ||||||||||||    
T  47585242 tgaatagaaggcaaacagacaacaaactacgccgctaaacctttttagatgacaaaaccaatcttcgtaaacacaa 47585167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 506 - 540
Target Start/End: Original strand, 9601122 - 9601156
Alignment:
Q  506 ctttttggatggcaaaatcaatcctcgtaaacaca 540  Q
    ||||||||||| |||||||||||||||||||||||    
T  9601122 ctttttggatgacaaaatcaatcctcgtaaacaca 9601156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 485 - 547
Target Start/End: Complemental strand, 34107911 - 34107849
Alignment:
Q  485 caacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    |||||||| | |||| || || |||||||||| ||||| |||||||||| |||||||||||||    
T  34107911 caacaagctgtgccgttaaacttttttggatgacaaaaccaatcctcgtgaacacaacattca 34107849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 170 - 216
Target Start/End: Original strand, 46823449 - 46823495
Alignment:
Q  170 tttgttaaggaaaccaaaactagtaagtttacattgaattcaacaat 216  Q
    ||||||||||||||||||| ||||| ||| |||||||| ||||||||    
T  46823449 tttgttaaggaaaccaaaaatagtaggttgacattgaaatcaacaat 46823495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 171 - 216
Target Start/End: Complemental strand, 39158457 - 39158412
Alignment:
Q  171 ttgttaaggaaaccaaaactagtaagtttacattgaattcaacaat 216  Q
    |||||||||||| ||||| ||||| |||||||||||||| ||||||    
T  39158457 ttgttaaggaaatcaaaagtagtatgtttacattgaattgaacaat 39158412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 507 - 547
Target Start/End: Original strand, 1041339 - 1041379
Alignment:
Q  507 tttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    ||||||||||| |||||||||| ||| ||||||||||||||    
T  1041339 tttttggatggtaaaatcaatcatcgaaaacacaacattca 1041379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 164 - 216
Target Start/End: Original strand, 13966530 - 13966582
Alignment:
Q  164 agggcttttgttaaggaaaccaaaactagtaagtttacattgaattcaacaat 216  Q
    ||||| ||||||||||||||||||| |||||   |||||||| ||||||||||    
T  13966530 agggcatttgttaaggaaaccaaaaatagtagagttacattggattcaacaat 13966582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 505 - 545
Target Start/End: Complemental strand, 49354265 - 49354225
Alignment:
Q  505 cctttttggatggcaaaatcaatcctcgtaaacacaacatt 545  Q
    |||||||||| | ||||||||||| ||||||||||||||||    
T  49354265 cctttttggacgacaaaatcaatcatcgtaaacacaacatt 49354225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 171 - 215
Target Start/End: Original strand, 52341579 - 52341623
Alignment:
Q  171 ttgttaaggaaaccaaaactagtaagtttacattgaattcaacaa 215  Q
    |||||||||||||||||| ||||| |||| ||||| |||||||||    
T  52341579 ttgttaaggaaaccaaaattagtatgtttgcattggattcaacaa 52341623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 80; Significance: 3e-37; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 440 - 547
Target Start/End: Original strand, 26772605 - 26772712
Alignment:
Q  440 tatttactattaatattacatacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacac 539  Q
    |||||| ||| |||||||| ||||||||||||||||| |||| | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  26772605 tatttattatcaatattacttacacatgaataggaggcaagcgggcaacaagctgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacac 26772704  T
Q  540 aacattca 547  Q
    ||||||||    
T  26772705 aacattca 26772712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 440 - 547
Target Start/End: Complemental strand, 38671140 - 38671033
Alignment:
Q  440 tatttactattaatattacatacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacac 539  Q
    |||||||||| |||||||  ||||||| |||||||||||||| |||||||||| |||||||||||| ||||| |||||||||| ||||||||||| ||||    
T  38671140 tatttactatcaatattatttacacataaataggaggtaagcggacaacaagctgcgccgctagacttttttagatggcaaaaccaatcctcgtacacac 38671041  T
Q  540 aacattca 547  Q
    ||||||||    
T  38671040 aacattca 38671033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 454 - 547
Target Start/End: Complemental strand, 39583475 - 39583382
Alignment:
Q  454 attacatacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    ||||| ||||||||||||| | | ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  39583475 attacttacacatgaatagaaagcaagcagacaacaagttgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacgacattca 39583382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 460 - 547
Target Start/End: Original strand, 32546662 - 32546749
Alignment:
Q  460 tacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    ||||| ||||||| ||| |||| | |||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  32546662 tacacttgaatagaaggcaagcgggcaacaagctgcgccgctagacctttttggatggcaaaaccaatcctcgtgaacacaacattca 32546749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 460 - 547
Target Start/End: Original strand, 53785576 - 53785663
Alignment:
Q  460 tacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    ||||| ||||||| ||| |||| | ||||||||  ||||||| |||||| ||||||||||||| ||||||||||||||| ||||||||    
T  53785576 tacacttgaatagaaggcaagcgggcaacaagctacgccgctggaccttgttggatggcaaaaccaatcctcgtaaacataacattca 53785663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 497 - 547
Target Start/End: Original strand, 26276519 - 26276569
Alignment:
Q  497 ccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  26276519 ccgctagatctttttggatggcaaaatcaatcctcataaacacaacattca 26276569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 483 - 547
Target Start/End: Complemental strand, 37133216 - 37133152
Alignment:
Q  483 gacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    |||||||| | |||||||||||||||||||||| |||||| |||||||  |||||||||||||||    
T  37133216 gacaacaaactgcgccgctagacctttttggatcgcaaaaccaatccttataaacacaacattca 37133152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 460 - 543
Target Start/End: Original strand, 44700 - 44783
Alignment:
Q  460 tacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaaca 543  Q
    ||||| ||||||| ||| |||| | |||||| | |||||||||||||||||||||||||||||  |||||| || |||||||||    
T  44700 tacacttgaatagaaggcaagcgggcaacaaactgcgccgctagacctttttggatggcaaaacaaatccttgtgaacacaaca 44783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 499 - 546
Target Start/End: Original strand, 5338552 - 5338599
Alignment:
Q  499 gctagacctttttggatggcaaaatcaatcctcgtaaacacaacattc 546  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||    
T  5338552 gctagaccattttggatggcaaaaccaatcctcgtaaacacaacattc 5338599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 460 - 547
Target Start/End: Original strand, 44198634 - 44198721
Alignment:
Q  460 tacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    ||||| ||||||| ||| |||| |||||||||| | | ||||  ||||||||||||||||||||||||  ||| ||||||||||||||    
T  44198634 tacacttgaatagaaggcaagcggacaacaagctgtgtcgctcaacctttttggatggcaaaatcaattatcgcaaacacaacattca 44198721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 460 - 547
Target Start/End: Complemental strand, 46941013 - 46940926
Alignment:
Q  460 tacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    ||||||||||||| |||||| ||| |||||||  || |||||||  ||||||||||  ||||||||||  ||||||||||||||||||    
T  46941013 tacacatgaatagaaggtaaacaggcaacaagttgcaccgctaggtctttttggataacaaaatcaattttcgtaaacacaacattca 46940926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 460 - 547
Target Start/End: Original strand, 49017834 - 49017921
Alignment:
Q  460 tacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    ||||| ||||||| ||| |||| |||||||||| || ||||     |||||||||||||||||||||||||| |||||||||||||||    
T  49017834 tacacttgaatagaaggcaagcggacaacaagctgcaccgccgatactttttggatggcaaaatcaatcctcataaacacaacattca 49017921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 485 - 547
Target Start/End: Complemental strand, 4669878 - 4669816
Alignment:
Q  485 caacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    |||||||| ||||||| | ||||||||||||  ||||||||||| ||||||||||||||||||    
T  4669878 caacaagctgcgccgccaaacctttttggataacaaaatcaatcatcgtaaacacaacattca 4669816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 485 - 547
Target Start/End: Complemental strand, 26856977 - 26856915
Alignment:
Q  485 caacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    |||||||| |||||||||| ||||||||||||| |||| ||||||||| || |||||||||||    
T  26856977 caacaagctgcgccgctaggcctttttggatggtaaaaccaatcctcgcaagcacaacattca 26856915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 498 - 547
Target Start/End: Original strand, 13582415 - 13582464
Alignment:
Q  498 cgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    |||||| |||||||||||||| ||||||||| ||||||||||||||||||    
T  13582415 cgctaggcctttttggatggctaaatcaatcttcgtaaacacaacattca 13582464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 497 - 547
Target Start/End: Complemental strand, 26393889 - 26393839
Alignment:
Q  497 ccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    |||||| ||||| |||||||| || ||||||||||||||||||||||||||    
T  26393889 ccgctaaaccttgttggatggaaatatcaatcctcgtaaacacaacattca 26393839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 216
Target Start/End: Complemental strand, 45899672 - 45899630
Alignment:
Q  174 ttaaggaaaccaaaactagtaagtttacattgaattcaacaat 216  Q
    ||||||||||||||| ||||| |||||||||||||||||||||    
T  45899672 ttaaggaaaccaaaagtagtatgtttacattgaattcaacaat 45899630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 486 - 529
Target Start/End: Original strand, 8592034 - 8592077
Alignment:
Q  486 aacaagccgcgccgctagacctttttggatggcaaaatcaatcc 529  Q
    ||||||| |||||||| | |||||||||||||||||||||||||    
T  8592034 aacaagctgcgccgctgggcctttttggatggcaaaatcaatcc 8592077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 500 - 547
Target Start/End: Complemental strand, 35484880 - 35484833
Alignment:
Q  500 ctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    |||||||||||||||||||||||| | |||| ||| ||||||||||||    
T  35484880 ctagacctttttggatggcaaaattattccttgtagacacaacattca 35484833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 176 - 214
Target Start/End: Complemental strand, 17073191 - 17073153
Alignment:
Q  176 aaggaaaccaaaactagtaagtttacattgaattcaaca 214  Q
    ||||||||||||| |||||||||| ||||||||||||||    
T  17073191 aaggaaaccaaaaatagtaagtttgcattgaattcaaca 17073153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 547
Target Start/End: Complemental strand, 3376952 - 3376891
Alignment:
Q  486 aacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    ||||||| || ||| |||| |||||| |||| ||||||||||| || |||||||||||||||    
T  3376952 aacaagctgcaccgttagatctttttagatgacaaaatcaatcatcataaacacaacattca 3376891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 506 - 547
Target Start/End: Complemental strand, 3443506 - 3443465
Alignment:
Q  506 ctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    |||| |||||||||||| ||||| ||||||||||||||||||    
T  3443506 ctttgtggatggcaaaaccaatcatcgtaaacacaacattca 3443465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Original strand, 23535180 - 23535213
Alignment:
Q  505 cctttttggatggcaaaatcaatcctcgtaaaca 538  Q
    ||||| ||||||||||||||||||||||||||||    
T  23535180 cctttctggatggcaaaatcaatcctcgtaaaca 23535213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 506 - 547
Target Start/End: Complemental strand, 32691060 - 32691019
Alignment:
Q  506 ctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    |||||||||||  ||||||||||||| |||||||||||||||    
T  32691060 ctttttggatgataaaatcaatcctcttaaacacaacattca 32691019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 451 - 536
Target Start/End: Original strand, 50657235 - 50657320
Alignment:
Q  451 aatattacatacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaa 536  Q
    |||||||| |||||||||||| |||  |||| |||||||| |  || ||||||| ||||||| || |||||| ||||| |||||||    
T  50657235 aatattacttacacatgaatatgagacaagctgacaacaaactacgtcgctagatctttttgaatagcaaaaccaatcttcgtaaa 50657320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 515 - 547
Target Start/End: Original strand, 2601751 - 2601783
Alignment:
Q  515 tggcaaaatcaatcctcgtaaacacaacattca 547  Q
    |||||||||||||||||||||||||||| ||||    
T  2601751 tggcaaaatcaatcctcgtaaacacaacgttca 2601783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 287 - 323
Target Start/End: Complemental strand, 51256089 - 51256053
Alignment:
Q  287 tcttaatcaatgttctaaggacactctttagcatttc 323  Q
    |||||||||||| ||||||| ||||||||||||||||    
T  51256089 tcttaatcaatgctctaagggcactctttagcatttc 51256053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 505 - 541
Target Start/End: Complemental strand, 52412086 - 52412050
Alignment:
Q  505 cctttttggatggcaaaatcaatcctcgtaaacacaa 541  Q
    |||||||||||||||||||||||| | ||||||||||    
T  52412086 cctttttggatggcaaaatcaatcattgtaaacacaa 52412050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 76; Significance: 7e-35; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 440 - 547
Target Start/End: Complemental strand, 17249565 - 17249458
Alignment:
Q  440 tatttactattaatattacatacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacac 539  Q
    |||||||||| |||||||| || |||||||||||||| |||| | |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  17249565 tatttactatcaatattacttatacatgaataggaggcaagcgggcaacaagctgcgccgctagacctttttggatggcaaaaccaatcctcgtaaacac 17249466  T
Q  540 aacattca 547  Q
    ||||||||    
T  17249465 aacattca 17249458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 440 - 547
Target Start/End: Original strand, 7749328 - 7749435
Alignment:
Q  440 tatttactattaatattacatacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacac 539  Q
    |||||||||| |||||||  ||||||||||||||||| |||| | |||||||| || |||||||||||||| ||||||||||| ||||||||||||||||    
T  7749328 tatttactatcaatattagttacacatgaataggaggcaagcgggcaacaagctgcaccgctagaccttttaggatggcaaaaccaatcctcgtaaacac 7749427  T
Q  540 aacattca 547  Q
    ||||||||    
T  7749428 aacattca 7749435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 444 - 547
Target Start/End: Complemental strand, 33220967 - 33220864
Alignment:
Q  444 tactattaatattacatacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaaca 543  Q
    |||||| |||||||| ||||||||||||||||| |||| | |||||||| ||||||||||||||||| ||||||||||| ||||  |||||||| |||||    
T  33220967 tactatcaatattacttacacatgaataggaggcaagcggccaacaagctgcgccgctagaccttttaggatggcaaaaccaattatcgtaaacgcaaca 33220868  T
Q  544 ttca 547  Q
    ||||    
T  33220867 ttca 33220864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 451 - 547
Target Start/End: Complemental strand, 357965 - 357869
Alignment:
Q  451 aatattacatacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    |||||||| |||| |||||||||||  || | ||||||||||   ||||||| || ||||| ||||||||||| |||| ||||||||||||||||||    
T  357965 aatattacttacatatgaataggagacaaaccgacaacaagctatgccgctatacatttttagatggcaaaattaatcttcgtaaacacaacattca 357869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 460 - 547
Target Start/End: Original strand, 34168788 - 34168874
Alignment:
Q  460 tacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    ||||||||||||| ||| |||| | | |||||  |||||||||| ||||||||||| |||||| |||||||||| |||||||||||||    
T  34168788 tacacatgaatagaaggcaagcgggcgacaagttgcgccgctaggcctttttggatagcaaaaccaatcctcgt-aacacaacattca 34168874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 496 - 547
Target Start/End: Original strand, 34304399 - 34304450
Alignment:
Q  496 gccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    ||||||| |||||||||||| |||||||||||||||||||| ||||||||||    
T  34304399 gccgctatacctttttggattgcaaaatcaatcctcgtaaatacaacattca 34304450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 505 - 547
Target Start/End: Complemental strand, 3137442 - 3137400
Alignment:
Q  505 cctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  3137442 cctttttggatggcaaaaccaatcctcgtaaacacaacattca 3137400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 489 - 547
Target Start/End: Original strand, 28625827 - 28625885
Alignment:
Q  489 aagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    |||| ||||||||||| ||||||| |||||||||||||||  |||||||||||||||||    
T  28625827 aagctgcgccgctagatctttttgaatggcaaaatcaatctccgtaaacacaacattca 28625885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 497 - 547
Target Start/End: Original strand, 32115622 - 32115672
Alignment:
Q  497 ccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    ||||||||||||||| ||| |||||||||||| ||||||||||||||||||    
T  32115622 ccgctagacctttttagatagcaaaatcaatcatcgtaaacacaacattca 32115672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 500 - 547
Target Start/End: Complemental strand, 34554476 - 34554429
Alignment:
Q  500 ctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    |||| |||||||||||| |||||||||||||||||||||||| |||||    
T  34554476 ctaggcctttttggatgacaaaatcaatcctcgtaaacacaaaattca 34554429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 505 - 547
Target Start/End: Original strand, 959493 - 959535
Alignment:
Q  505 cctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    ||||||| |||| ||||||||||||||||||||||||||||||    
T  959493 cctttttagatgacaaaatcaatcctcgtaaacacaacattca 959535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 440 - 506
Target Start/End: Complemental strand, 32531108 - 32531042
Alignment:
Q  440 tatttactattaatattacatacacatgaataggaggtaagcagacaacaagccgcgccgctagacc 506  Q
    |||||||||| |||||||| |||||||||||| |||  | ||||||||||||| || ||||||||||    
T  32531108 tatttactatcaatattacttacacatgaatatgagacacgcagacaacaagctgcaccgctagacc 32531042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 216
Target Start/End: Complemental strand, 12226460 - 12226417
Alignment:
Q  173 gttaaggaaaccaaaactagtaagtttacattgaattcaacaat 216  Q
    |||||||||||||||| |||||  ||||||||||||||||||||    
T  12226460 gttaaggaaaccaaaaatagtatatttacattgaattcaacaat 12226417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 216
Target Start/End: Original strand, 26539092 - 26539135
Alignment:
Q  173 gttaaggaaaccaaaactagtaagtttacattgaattcaacaat 216  Q
    ||||||||||| |||| |||||||||| ||||||||||||||||    
T  26539092 gttaaggaaactaaaaatagtaagtttgcattgaattcaacaat 26539135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 460 - 547
Target Start/End: Complemental strand, 28009227 - 28009140
Alignment:
Q  460 tacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    ||||||||||||| ||| || | ||||| |||| ||| || ||| ||||||||||| ||||||||||| || ||||| ||||| ||||    
T  28009227 tacacatgaatagaaggcaaacggacaataagctgcgtcgttaggcctttttggattgcaaaatcaattctggtaaagacaacgttca 28009140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 485 - 547
Target Start/End: Complemental strand, 29338294 - 29338232
Alignment:
Q  485 caacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    |||||||| || | ||||| || |||||||| | |||||||||||| ||||||||||||||||    
T  29338294 caacaagctgcactgctaggccattttggatagaaaaatcaatccttgtaaacacaacattca 29338232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 194
Target Start/End: Original strand, 29319077 - 29319122
Alignment:
Q  149 ttaacaagtgcccttagggcttttgttaaggaaaccaaaactagta 194  Q
    ||||||||||||||| |||| |||||||||||||| |||| |||||    
T  29319077 ttaacaagtgcccttggggcatttgttaaggaaactaaaagtagta 29319122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 287 - 327
Target Start/End: Original strand, 13000224 - 13000264
Alignment:
Q  287 tcttaatcaatgttctaaggacactctttagcatttctcat 327  Q
    ||||||||||||||||||| || ||||||| ||||||||||    
T  13000224 tcttaatcaatgttctaagaacgctctttaacatttctcat 13000264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 454 - 538
Target Start/End: Original strand, 28543258 - 28543342
Alignment:
Q  454 attacatacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaaca 538  Q
    ||||| ||| ||||||||| ||| |||| |||||  ||  ||||||||||| |||||  |||||||||| |||||||| ||||||    
T  28543258 attacttacgcatgaatagaaggcaagcggacaattagttgcgccgctagatcttttcagatggcaaaaccaatcctcttaaaca 28543342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 72; Significance: 2e-32; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 452 - 547
Target Start/End: Complemental strand, 45003145 - 45003050
Alignment:
Q  452 atattacatacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    ||||||| ||||||||||||||||| |||| ||||| |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  45003145 atattacttacacatgaataggaggcaagcggacaataagctgcgccgctagacctttttggatggcaaaatcaatcttcgtaaacacaacattca 45003050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 460 - 547
Target Start/End: Complemental strand, 21327078 - 21326991
Alignment:
Q  460 tacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    ||||| ||||||| ||| ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  21327078 tacacttgaatagaaggcaagcagacaacaagctgcgccgttagacctttttggatggcaaaatcaatcctcgtgaacacaacattca 21326991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 440 - 547
Target Start/End: Complemental strand, 28517547 - 28517440
Alignment:
Q  440 tatttactattaatattacatacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacac 539  Q
    |||||||||| |||||||| ||||||||||||||||| |  | | |||||||| | | |||||||| |||||||||||||||| ||||||||||||||||    
T  28517547 tatttactatcaatattacttacacatgaataggaggcagacgggcaacaagctgtgtcgctagacttttttggatggcaaaaccaatcctcgtaaacac 28517448  T
Q  540 aacattca 547  Q
    ||||||||    
T  28517447 aacattca 28517440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 466 - 547
Target Start/End: Complemental strand, 45614076 - 45613995
Alignment:
Q  466 tgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    ||||||| ||| |||| |||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  45614076 tgaatagaaggcaagcggacaacaagctgcgccgctagaccttttcggatggcaaaaccaatcctcgtaaacacaacattca 45613995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 440 - 544
Target Start/End: Original strand, 5825120 - 5825224
Alignment:
Q  440 tatttactattaatattacatacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacac 539  Q
    |||| ||||| |||||| | ||||||||||||||||| ||||||  ||||||| ||||||  |||||||||| |||||||||| ||||||||||||||||    
T  5825120 tattaactatcaatatttcttacacatgaataggaggcaagcaggtaacaagctgcgccgtaagacctttttcgatggcaaaaccaatcctcgtaaacac 5825219  T
Q  540 aacat 544  Q
    |||||    
T  5825220 aacat 5825224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 441 - 527
Target Start/End: Original strand, 38766172 - 38766258
Alignment:
Q  441 atttactattaatattacatacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaat 527  Q
    ||||||||| |||||||| ||||||||||||||||| |||| | |||||||| |||| |||||||||||||||||||||||| ||||    
T  38766172 atttactatcaatattacttacacatgaataggaggcaagcgggcaacaagctgcgcagctagacctttttggatggcaaaaccaat 38766258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 455 - 547
Target Start/End: Complemental strand, 40726725 - 40726633
Alignment:
Q  455 ttacatacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    |||| ||||||||||||||||| |||| | |||||||| |||  | ||||| ||||||||||||||||||||||||| |||||||||||||||    
T  40726725 ttacttacacatgaataggaggcaagcgggcaacaagctgcgatgttagacatttttggatggcaaaatcaatcctcataaacacaacattca 40726633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 441 - 516
Target Start/End: Original strand, 38832150 - 38832225
Alignment:
Q  441 atttactattaatattacatacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatg 516  Q
    ||||||||| |||||||| |||| |||||||||||| |||| | |||||||| |||||||||||||||||||||||    
T  38832150 atttactatcaatattacttacatatgaataggaggcaagcgggcaacaagctgcgccgctagacctttttggatg 38832225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 460 - 547
Target Start/End: Complemental strand, 45974839 - 45974752
Alignment:
Q  460 tacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    ||||| ||||||| ||  |||| |||||||||| ||||| ||||||||||||||||| ||||||  ||||| ||||||||||||||||    
T  45974839 tacacttgaatagaagacaagcggacaacaagctgcgccactagacctttttggatgacaaaatttatccttgtaaacacaacattca 45974752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 466 - 547
Target Start/End: Original strand, 982822 - 982903
Alignment:
Q  466 tgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    ||||||| ||| || ||| |||||||| | | ||||||||||||||||||||||| | |||||||||| |||||||||||||    
T  982822 tgaatagaaggcaaacaggcaacaagctgtgtcgctagacctttttggatggcaataccaatcctcgtgaacacaacattca 982903  T

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Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 440 - 516
Target Start/End: Complemental strand, 36931962 - 36931887
Alignment:
Q  440 tatttactattaatattacatacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatg 516  Q
    |||||||||| |||||||| |||| |||||||||||| |||| || ||||||| ||||||||||| |||||||||||    
T  36931962 tatttactatcaatattacttacatatgaataggaggcaagcggataacaagctgcgccgctaga-ctttttggatg 36931887  T

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Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 486 - 547
Target Start/End: Original strand, 24527482 - 24527543
Alignment:
Q  486 aacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    ||||||| ||||||||||| ||||||||||| ||||| |||||||||| || ||||||||||    
T  24527482 aacaagctgcgccgctagatctttttggatgacaaaaccaatcctcgtgaatacaacattca 24527543  T

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Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 506 - 547
Target Start/End: Original strand, 48539094 - 48539135
Alignment:
Q  506 ctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  48539094 ctttttggatggcaaaaccaatcctcgtaaacacaacattca 48539135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 507 - 547
Target Start/End: Original strand, 27521385 - 27521425
Alignment:
Q  507 tttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  27521385 tttttcgatggcaaaatcaatcctcgtaaacacaacattca 27521425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 37526532 - 37526472
Alignment:
Q  19 aattttctcaagtgaaatttcaactatcaaacacgagagagaaaataagaattaaattata 79  Q
    |||||||||||||| ||| ||||| ||||||||  ||||||||||| ||||||||||||||    
T  37526532 aattttctcaagtggaatctcaaccatcaaacataagagagaaaatgagaattaaattata 37526472  T

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Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 460 - 547
Target Start/End: Complemental strand, 25187171 - 25187084
Alignment:
Q  460 tacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    ||||| ||||||| ||| |||| | |||||||| ||||||||||| |||||| ||||| |||||||||| | |  |||||||||||||    
T  25187171 tacacttgaatagaaggcaagcgggcaacaagctgcgccgctagatctttttagatggtaaaatcaatcattgggaacacaacattca 25187084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 485 - 547
Target Start/End: Complemental strand, 41117986 - 41117923
Alignment:
Q  485 caacaagcc-gcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    ||||||||| |||||||| ||| ||||||||| |||||||||||| |||| |||||||||||||    
T  41117986 caacaagcctgcgccgctggacttttttggatagcaaaatcaatcatcgtgaacacaacattca 41117923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 21 - 76
Target Start/End: Original strand, 45235037 - 45235092
Alignment:
Q  21 ttttctcaagtgaaatttcaactatcaaacacgagagagaaaataagaattaaatt 76  Q
    |||||||||||||||| ||||| ||||||||  ||||||||||| |||||||||||    
T  45235037 ttttctcaagtgaaatctcaaccatcaaacataagagagaaaatgagaattaaatt 45235092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 505 - 547
Target Start/End: Original strand, 23037457 - 23037499
Alignment:
Q  505 cctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    ||||||| ||||||||||||||||||||||||||||| |||||    
T  23037457 cctttttagatggcaaaatcaatcctcgtaaacacaaaattca 23037499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 497 - 547
Target Start/End: Complemental strand, 27027833 - 27027783
Alignment:
Q  497 ccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    |||||||| |||||||||| |||||| |||||||||| |||||||||||||    
T  27027833 ccgctagatctttttggatagcaaaaccaatcctcgtgaacacaacattca 27027783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 506 - 547
Target Start/End: Complemental strand, 5972410 - 5972369
Alignment:
Q  506 ctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    |||||||||||||||||  |||||||||||||||||||||||    
T  5972410 ctttttggatggcaaaactaatcctcgtaaacacaacattca 5972369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 460 - 545
Target Start/End: Complemental strand, 9281376 - 9281291
Alignment:
Q  460 tacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacatt 545  Q
    |||| |||||||  ||||||||||||||||| | || ||| ||  ||||||||||| |||||| |||| ||| |||||||||||||    
T  9281376 tacatatgaatataaggtaagcagacaacaaactgcaccgttaagcctttttggattgcaaaaccaattctcctaaacacaacatt 9281291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 460 - 545
Target Start/End: Complemental strand, 9292347 - 9292262
Alignment:
Q  460 tacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacatt 545  Q
    |||| |||||||  ||||||||||||||||| | || ||| ||  ||||||||||| |||||| |||| ||| |||||||||||||    
T  9292347 tacatatgaatataaggtaagcagacaacaaactgcaccgttaagcctttttggattgcaaaaccaattctcctaaacacaacatt 9292262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 494 - 547
Target Start/End: Original strand, 32584501 - 32584554
Alignment:
Q  494 gcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    |||| ||||| ||||||||||||| |||||||||| | ||||||||||||||||    
T  32584501 gcgctgctaggcctttttggatggtaaaatcaatctttgtaaacacaacattca 32584554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 152 - 213
Target Start/End: Complemental strand, 44297051 - 44296990
Alignment:
Q  152 acaagtgcccttagggcttttgttaaggaaaccaaaactagtaagtttacattgaattcaac 213  Q
    ||||||||||||| |||  |||||||||||||||||| ||| | |||||||||| |||||||    
T  44297051 acaagtgcccttaaggcacttgttaaggaaaccaaaagtagcaggtttacattggattcaac 44296990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 150 - 214
Target Start/End: Original strand, 35003563 - 35003626
Alignment:
Q  150 taacaagtgcccttagggcttttgttaaggaaaccaaaactagtaagtttacattgaattcaaca 214  Q
    |||| |||||||||||| |  ||||||| |||||||||| |||||||||||| ||||||||||||    
T  35003563 taacgagtgcccttaggacacttgttaatgaaaccaaaa-tagtaagtttactttgaattcaaca 35003626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 460 - 547
Target Start/End: Original strand, 2904248 - 2904334
Alignment:
Q  460 tacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    ||||||||||||| ||  |  ||||||||||||  |||| ||| |||||||||||| |||||| ||||  ||||||||||||||||||    
T  2904248 tacacatgaatagaagacatacagacaacaagctacgccacta-acctttttggatagcaaaaccaattatcgtaaacacaacattca 2904334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 460 - 547
Target Start/End: Original strand, 4501126 - 4501213
Alignment:
Q  460 tacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    ||||| ||||||  ||| |||| ||||| |||  |||| ||||||||||||| |||| ||||   |||||||||||||||||||||||    
T  4501126 tacacttgaatataaggcaagcggacaataagatgcgctgctagacctttttagatgacaaagctaatcctcgtaaacacaacattca 4501213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 527
Target Start/End: Original strand, 19277187 - 19277225
Alignment:
Q  489 aagccgcgccgctagacctttttggatggcaaaatcaat 527  Q
    |||| ||||||||||||||||||||||||||||| ||||    
T  19277187 aagctgcgccgctagacctttttggatggcaaaaccaat 19277225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 505 - 547
Target Start/End: Original strand, 22197899 - 22197941
Alignment:
Q  505 cctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    |||||||||||| ||||||||||  ||||||||||||||||||    
T  22197899 cctttttggatgacaaaatcaattatcgtaaacacaacattca 22197941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 505 - 547
Target Start/End: Complemental strand, 22239922 - 22239880
Alignment:
Q  505 cctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    |||||||||||| ||||||||||  ||||||||||||||||||    
T  22239922 cctttttggatgacaaaatcaattatcgtaaacacaacattca 22239880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 501 - 547
Target Start/End: Original strand, 38839234 - 38839280
Alignment:
Q  501 tagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    ||||| ||||||||||| |||| ||||| ||||||||||||||||||    
T  38839234 tagacatttttggatggtaaaaccaatcttcgtaaacacaacattca 38839280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 501 - 547
Target Start/End: Complemental strand, 41071800 - 41071754
Alignment:
Q  501 tagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    |||| ||||||||||| ||||||||||| ||||||||| ||||||||    
T  41071800 tagatctttttggatgacaaaatcaatcttcgtaaacataacattca 41071754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 504 - 545
Target Start/End: Original strand, 32336318 - 32336359
Alignment:
Q  504 acctttttggatggcaaaatcaatcctcgtaaacacaacatt 545  Q
    ||||||||||||||||||||||||| | || |||||||||||    
T  32336318 acctttttggatggcaaaatcaatctttgtgaacacaacatt 32336359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 494 - 546
Target Start/End: Original strand, 34856766 - 34856818
Alignment:
Q  494 gcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattc 546  Q
    |||||||||||||||||| |||| |||||||||||   |||||||||| ||||    
T  34856766 gcgccgctagacctttttagatgacaaaatcaatctcagtaaacacaatattc 34856818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 507 - 547
Target Start/End: Original strand, 43856788 - 43856828
Alignment:
Q  507 tttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    ||||||||| ||||||||||| |||||||||| ||||||||    
T  43856788 tttttggatagcaaaatcaattctcgtaaacataacattca 43856828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 71; Significance: 7e-32; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 442 - 547
Target Start/End: Original strand, 430451 - 430556
Alignment:
Q  442 tttactattaatattacatacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaa 541  Q
    |||||||| |||||||| | ||||||||||||||| |||||||| |||||| || ||| ||||||||||||||||||| |||||||||||||||||||||    
T  430451 tttactatcaatattacttgcacatgaataggaggcaagcagacnacaagctgcaccgatagacctttttggatggcataatcaatcctcgtaaacacaa 430550  T
Q  542 cattca 547  Q
    ||||||    
T  430551 cattca 430556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 442 - 536
Target Start/End: Complemental strand, 2917619 - 2917524
Alignment:
Q  442 tttactattaatattacatacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggc-aaaatcaatcctcgtaaa 536  Q
    |||||||| |||||||| ||||||||||||||||| |||||| |||||| | ||||||||||||||||||||||||| |||| |||||||||||||    
T  2917619 tttactatcaatattacctacacatgaataggaggcaagcaggcaacaaactgcgccgctagacctttttggatggcaaaaaccaatcctcgtaaa 2917524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 440 - 547
Target Start/End: Original strand, 27336542 - 27336649
Alignment:
Q  440 tatttactattaatattacatacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacac 539  Q
    |||||||||| |||||||| ||||||||||||||||  |||| ||||| || | || ||||||||||||||| |||||||||||||||||| ||||| ||    
T  27336542 tatttactatcaatattacttacacatgaataggagacaagcggacaataaactgcaccgctagaccttttttgatggcaaaatcaatccttgtaaaaac 27336641  T
Q  540 aacattca 547  Q
    ||||||||    
T  27336642 aacattca 27336649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 439 - 547
Target Start/End: Original strand, 35310294 - 35310402
Alignment:
Q  439 ttatttactattaatattacatacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaaca 538  Q
    ||||| ||||| |||||||| ||||||||||||||||| |||| | |||||||| ||| || || |||| |||||||||||||| |||| ||||||||||    
T  35310294 ttattaactatcaatattacttacacatgaataggaggcaagcgggcaacaagctgcgtcgttaaacctctttggatggcaaaaccaattctcgtaaaca 35310393  T
Q  539 caacattca 547  Q
    |||||||||    
T  35310394 caacattca 35310402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 485 - 545
Target Start/End: Complemental strand, 2566310 - 2566250
Alignment:
Q  485 caacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacatt 545  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2566310 caacaagttgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacatt 2566250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 451 - 547
Target Start/End: Complemental strand, 33692301 - 33692207
Alignment:
Q  451 aatattacatacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    |||||||| ||||||||||||||||| |||||| |||||||| ||||||||||| |||||||||||| |||| |||   ||||||||| ||||||||    
T  33692301 aatattacttacacatgaataggaggcaagcaggcaacaagctgcgccgctagatctttttggatggaaaaaccaa--atcgtaaacagaacattca 33692207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 451 - 547
Target Start/End: Complemental strand, 13167159 - 13167063
Alignment:
Q  451 aatattacatacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    |||||||  ||||||||||||||||| |||  | |||||||| ||||||||||| ||||||||||  || |||||||| |||||||| |||||||||    
T  13167159 aatattaattacacatgaataggaggcaagtgggcaacaagctgcgccgctagatctttttggataacagaatcaatcatcgtaaacccaacattca 13167063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 442 - 547
Target Start/End: Complemental strand, 25663290 - 25663185
Alignment:
Q  442 tttactattaatattacatacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaa 541  Q
    |||||||| |||||||| ||||||| || |||||| || |   |||||||| ||| || |||||||||||||||| ||||  |||||||||||||| |||    
T  25663290 tttactatcaatattacttacacataaaaaggaggcaaacgagcaacaagctgcgtcgttagacctttttggatgacaaagccaatcctcgtaaactcaa 25663191  T
Q  542 cattca 547  Q
    ||||||    
T  25663190 cattca 25663185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 486 - 541
Target Start/End: Original strand, 42921591 - 42921646
Alignment:
Q  486 aacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaa 541  Q
    ||||||| ||||||||||| ||||||||||||||||| ||||||| ||||||||||    
T  42921591 aacaagctgcgccgctagatctttttggatggcaaaaccaatccttgtaaacacaa 42921646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 14913591 - 14913649
Alignment:
Q  21 ttttctcaagtgaaatttcaactatcaaacacgagagagaaaataagaattaaattata 79  Q
    |||||||||||||||| ||||| |||||||| |||||||||| | ||||||||||||||    
T  14913591 ttttctcaagtgaaatctcaaccatcaaacatgagagagaaagtgagaattaaattata 14913649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 485 - 546
Target Start/End: Complemental strand, 15506830 - 15506769
Alignment:
Q  485 caacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattc 546  Q
    |||||||  |||||| ||| ||||||| ||||| ||||||||||||||||||||||||||||    
T  15506830 caacaagttgcgccgttaggccttttttgatggtaaaatcaatcctcgtaaacacaacattc 15506769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 494 - 547
Target Start/End: Original strand, 23023496 - 23023549
Alignment:
Q  494 gcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    ||||| |||| |||||||||||| ||||||||||| ||||||||||||||||||    
T  23023496 gcgcccctaggcctttttggatgacaaaatcaatcttcgtaaacacaacattca 23023549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 468 - 537
Target Start/End: Original strand, 23092694 - 23092763
Alignment:
Q  468 aataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaac 537  Q
    ||||| ||| ||||||||||||| | |||  |||||||||| ||||||| ||||||||||||||||||||    
T  23092694 aatagaaggcaagcagacaacaaactgcgttgctagaccttgttggatgacaaaatcaatcctcgtaaac 23092763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 507 - 547
Target Start/End: Complemental strand, 15292218 - 15292178
Alignment:
Q  507 tttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  15292218 tttttggatggcaaaatcaatcctcataaacacaacattca 15292178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 507 - 547
Target Start/End: Complemental strand, 32269990 - 32269950
Alignment:
Q  507 tttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  32269990 tttttggatggcgaaatcaatcctcgtaaacacaacattca 32269950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 485 - 540
Target Start/End: Original strand, 11005770 - 11005825
Alignment:
Q  485 caacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacaca 540  Q
    |||||||| |||||||||  |||||||||||||||||| ||||||| |||||||||    
T  11005770 caacaagctgcgccgctaagcctttttggatggcaaaaccaatcctagtaaacaca 11005825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 497 - 547
Target Start/End: Complemental strand, 37873841 - 37873791
Alignment:
Q  497 ccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    ||||||| ||||||| ||| ||||||||||||||| |||||||||||||||    
T  37873841 ccgctaggccttttttgatagcaaaatcaatcctcttaaacacaacattca 37873791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 500 - 547
Target Start/End: Complemental strand, 22188855 - 22188808
Alignment:
Q  500 ctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    |||||| |||||||||| ||||| |||| |||||||||||||||||||    
T  22188855 ctagacttttttggatgacaaaaccaattctcgtaaacacaacattca 22188808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 28234659 - 28234717
Alignment:
Q  21 ttttctcaagtgaaatttcaactatcaaacacgagagagaaaataagaattaaattata 79  Q
    |||||||| ||| ||| ||||| ||||| || |||||||||||| ||||||||||||||    
T  28234659 ttttctcatgtggaatctcaaccatcaatcatgagagagaaaatgagaattaaattata 28234717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 484 - 545
Target Start/End: Original strand, 8100445 - 8100505
Alignment:
Q  484 acaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacatt 545  Q
    ||||||||| ||||| |||| | |||||||||||||||||||||| ||| ||| ||||||||    
T  8100445 acaacaagctgcgccactaggcttttttggatggcaaaatcaatcatcgcaaa-acaacatt 8100505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 508 - 545
Target Start/End: Original strand, 12033346 - 12033383
Alignment:
Q  508 ttttggatggcaaaatcaatcctcgtaaacacaacatt 545  Q
    ||||||||||||||| ||||| ||||||||||||||||    
T  12033346 ttttggatggcaaaaccaatcatcgtaaacacaacatt 12033383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 287 - 327
Target Start/End: Complemental strand, 3241968 - 3241928
Alignment:
Q  287 tcttaatcaatgttctaaggacactctttagcatttctcat 327  Q
    ||||||||||||| |||| |||| |||||||||||||||||    
T  3241968 tcttaatcaatgtcctaaagacattctttagcatttctcat 3241928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 497 - 541
Target Start/End: Original strand, 14423591 - 14423635
Alignment:
Q  497 ccgctagacctttttggatggcaaaatcaatcctcgtaaacacaa 541  Q
    |||||||| ||||||||||||||||| ||||||| || |||||||    
T  14423591 ccgctagatctttttggatggcaaaaccaatccttgtgaacacaa 14423635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 460 - 540
Target Start/End: Original strand, 35455841 - 35455921
Alignment:
Q  460 tacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacaca 540  Q
    ||||||||||||| || ||| ||  ||||||||  ||| ||||||| |||||||| ||||||| |||| |||||| |||||    
T  35455841 tacacatgaatagaagataaacatgcaacaagctccgctgctagacatttttggacggcaaaaccaattctcgtagacaca 35455921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 69; Significance: 1e-30; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 440 - 547
Target Start/End: Original strand, 39434516 - 39434621
Alignment:
Q  440 tatttactattaatattacatacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacac 539  Q
    |||||||||| |||||||| |||||||||||||||||   ||   |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  39434516 tatttactatcaatattacttacacatgaataggaggc--gctagcaacaagctgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacac 39434613  T
Q  540 aacattca 547  Q
    ||||||||    
T  39434614 aacattca 39434621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 460 - 543
Target Start/End: Original strand, 18804480 - 18804563
Alignment:
Q  460 tacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaaca 543  Q
    ||||| ||||||| ||| |||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  18804480 tacacttgaatagaaggcaagcaggcaacaagctgcgccgctagacctttttggatggcaaaaccaatcctcgtaaacaaaaca 18804563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 440 - 547
Target Start/End: Original strand, 42659074 - 42659181
Alignment:
Q  440 tatttactattaatattacatacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacac 539  Q
    |||||||||| |||||||| |||||| |||||||||| |||| |||||||||     ||| |||||||||||||||| |||||| |||||||||||||||    
T  42659074 tatttactatcaatattacttacacaagaataggaggcaagcggacaacaagttataccgttagacctttttggatgacaaaattaatcctcgtaaacac 42659173  T
Q  540 aacattca 547  Q
    ||||||||    
T  42659174 aacattca 42659181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 460 - 547
Target Start/End: Complemental strand, 22589576 - 22589489
Alignment:
Q  460 tacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    ||||| ||||||  ||| |||| | |||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  22589576 tacacttgaataaaaggcaagcgggcaacaagctgcgccgctagacctttttggatggcaaaaccaatcctcgtgaacacaacattca 22589489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 460 - 547
Target Start/End: Original strand, 38815161 - 38815248
Alignment:
Q  460 tacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    ||||||||||||| ||| |||| | |||||||| |||||||||  ||||||||||||| |||| ||||||||||||||||||||||||    
T  38815161 tacacatgaatagaaggcaagcgggcaacaagctgcgccgctaagcctttttggatggaaaaaccaatcctcgtaaacacaacattca 38815248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 460 - 540
Target Start/End: Complemental strand, 18596839 - 18596759
Alignment:
Q  460 tacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacaca 540  Q
    ||||| ||||||| ||| |||| |||||||||| ||||||||||||||||| ||||||||||| |||||||||| ||||||    
T  18596839 tacacttgaatagaaggcaagctgacaacaagctgcgccgctagaccttttcggatggcaaaaccaatcctcgtgaacaca 18596759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 460 - 547
Target Start/End: Original strand, 24320204 - 24320291
Alignment:
Q  460 tacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    |||||| |||||| ||  || ||| |||||||| || | |||||||||||||||||  ||||||||||||||||||||||||||||||    
T  24320204 tacacacgaatagaagacaaacaggcaacaagctgcactgctagacctttttggatatcaaaatcaatcctcgtaaacacaacattca 24320291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 501 - 547
Target Start/End: Original strand, 3187878 - 3187924
Alignment:
Q  501 tagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||    
T  3187878 tagacctttttggatggcaaaaccaattctcgtaaacacaacattca 3187924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 485 - 547
Target Start/End: Original strand, 8882236 - 8882298
Alignment:
Q  485 caacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    |||||||| |||||| || || ||||| ||||||||||| |||||||||||||||||||||||    
T  8882236 caacaagctgcgccgttaaacattttttgatggcaaaattaatcctcgtaaacacaacattca 8882298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 485 - 547
Target Start/End: Original strand, 37514113 - 37514175
Alignment:
Q  485 caacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    |||||||| |||||| ||||||||||||| |||||| |||||||||||| || ||||||||||    
T  37514113 caacaagctgcgccgttagacctttttgggtggcaagatcaatcctcgtgaatacaacattca 37514175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 5300201 - 5300246
Alignment:
Q  171 ttgttaaggaaaccaaaactagtaagtttacattgaattcaacaat 216  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||    
T  5300201 ttgttaaggaaaccaaaagtagtaagtttgcattgaattcaacaat 5300246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 38829027 - 38828967
Alignment:
Q  19 aattttctcaagtgaaatttcaactatcaaacacgagagagaaaataagaattaaattata 79  Q
    |||||||||||||| ||| ||||| || ||| | |||||||||||||||||||||||||||    
T  38829027 aattttctcaagtggaatctcaaccattaaatatgagagagaaaataagaattaaattata 38828967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 496 - 547
Target Start/End: Original strand, 6592479 - 6592530
Alignment:
Q  496 gccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    |||||||||||||| |||||| ||||| |||| |||||||||||||||||||    
T  6592479 gccgctagacctttctggatgacaaaaccaatactcgtaaacacaacattca 6592530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 451 - 522
Target Start/End: Original strand, 44337198 - 44337268
Alignment:
Q  451 aatattacatacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaa 522  Q
    |||||||| ||||||||||||||||| ||||   |||||||| | |||||| ||||||||||||||||||||    
T  44337198 aatattacttacacatgaataggaggcaagcgagcaacaagctg-gccgctggacctttttggatggcaaaa 44337268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 505 - 547
Target Start/End: Original strand, 500154 - 500196
Alignment:
Q  505 cctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    |||||||| |||| |||||||||||||||||||||||||||||    
T  500154 cctttttgaatggtaaaatcaatcctcgtaaacacaacattca 500196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 485 - 547
Target Start/End: Original strand, 4699763 - 4699825
Alignment:
Q  485 caacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    |||||||| ||||| |||  ||||||||||||||||||  |||||| ||||||||||||||||    
T  4699763 caacaagctgcgccactaagcctttttggatggcaaaactaatccttgtaaacacaacattca 4699825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 460 - 542
Target Start/End: Complemental strand, 24350962 - 24350880
Alignment:
Q  460 tacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaac 542  Q
    ||||||||||||| || ||||| | ||||| || | ||| |||| | |||||||| ||||||| |||||||||||||||||||    
T  24350962 tacacatgaatagaagataagcgggcaacaggctgggccactaggcttttttggagggcaaaaccaatcctcgtaaacacaac 24350880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 152 - 213
Target Start/End: Complemental strand, 20212539 - 20212478
Alignment:
Q  152 acaagtgcccttagggcttttgttaaggaaaccaaaactagtaagtttacattgaattcaac 213  Q
    ||||||||||||| |||  |||||||||||||||||| ||| | |||||||||| |||||||    
T  20212539 acaagtgcccttaaggcacttgttaaggaaaccaaaagtagcaggtttacattggattcaac 20212478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 462 - 546
Target Start/End: Complemental strand, 25022052 - 25021968
Alignment:
Q  462 cacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattc 546  Q
    ||||||||||| ||| || || |||||||||  || |||||||  ||||||||||  |||||||||| | |||||||||||||||    
T  25022052 cacatgaatagaaggcaaacaaacaacaagctacgtcgctagaattttttggatgataaaatcaatcattgtaaacacaacattc 25021968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 150 - 216
Target Start/End: Complemental strand, 22575834 - 22575767
Alignment:
Q  150 taacaagtgcccttagggcttttgttaaggaaaccaaaactagt-aagtttacattgaattcaacaat 216  Q
    |||| ||||||||||||||  ||||||||||||| | || |||| |||||| ||||||||||||||||    
T  22575834 taaccagtgcccttagggcacttgttaaggaaactagaaatagtaaagtttgcattgaattcaacaat 22575767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 23690304 - 23690246
Alignment:
Q  19 aattttctcaagtgaaatttcaactatcaaacacgagagagaaaataagaattaaatta 77  Q
    |||||||||||||| ||| ||||| || ||||| |||||||||| | ||||||||||||    
T  23690304 aattttctcaagtggaatctcaacaattaaacatgagagagaaattcagaattaaatta 23690246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 547
Target Start/End: Original strand, 6618178 - 6618239
Alignment:
Q  486 aacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    ||||||| | |||| |||| ||||||||||| ||||| |||| |||||||||| ||||||||    
T  6618178 aacaagctgtgccgttagatctttttggatgacaaaaccaatactcgtaaacataacattca 6618239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 547
Target Start/End: Complemental strand, 8228049 - 8227988
Alignment:
Q  486 aacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    ||||||| |||||| || |  ||||||||| |||||| || |||||||||||||||||||||    
T  8228049 aacaagctgcgccgttaaatttttttggatagcaaaaccattcctcgtaaacacaacattca 8227988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 460 - 545
Target Start/End: Original strand, 8619689 - 8619774
Alignment:
Q  460 tacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacatt 545  Q
    ||||||||||||  || ||||| ||||| |||| ||   | ||| |||||||| | ||||||||||||| ||||||||||||||||    
T  8619689 tacacatgaataaaagttaagcggacaataagctgcattgttaggcctttttgaaaggcaaaatcaatcgtcgtaaacacaacatt 8619774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 325
Target Start/End: Complemental strand, 35973904 - 35973863
Alignment:
Q  284 tcttcttaatcaatgttctaaggacactctttagcatttctc 325  Q
    ||||||||||||||||||| | | ||||||||||||||||||    
T  35973904 tcttcttaatcaatgttcttaaggcactctttagcatttctc 35973863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 507 - 547
Target Start/End: Original strand, 4073448 - 4073488
Alignment:
Q  507 tttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    ||||||||||  ||||||||| |||||||||||||||||||    
T  4073448 tttttggatgataaaatcaattctcgtaaacacaacattca 4073488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 505 - 545
Target Start/End: Complemental strand, 5329797 - 5329757
Alignment:
Q  505 cctttttggatggcaaaatcaatcctcgtaaacacaacatt 545  Q
    |||||||||||| |||||| ||||||| |||||||||||||    
T  5329797 cctttttggatgtcaaaattaatcctcataaacacaacatt 5329757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 507 - 547
Target Start/End: Complemental strand, 9259485 - 9259445
Alignment:
Q  507 tttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    |||||||||| ||||||||||| ||||||| ||||||||||    
T  9259485 tttttggatgacaaaatcaatcttcgtaaatacaacattca 9259445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 6e-26; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 447 - 547
Target Start/End: Original strand, 27494165 - 27494265
Alignment:
Q  447 tattaatattacatacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattc 546  Q
    |||||||||||| |||| |||||||||||| |||||| |||||||| |||||| |||||||||||||||||||||| ||||  |||||||||||| ||||    
T  27494165 tattaatattacttacatatgaataggaggcaagcaggcaacaagctgcgccgttagacctttttggatggcaaaaccaatattcgtaaacacaatattc 27494264  T
Q  547 a 547  Q
    |    
T  27494265 a 27494265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 440 - 547
Target Start/End: Original strand, 28224847 - 28224954
Alignment:
Q  440 tatttactattaatattacatacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacac 539  Q
    |||||||||| |||||||| |||| |||||||||||  |||| | ||| |||| |||||||||||||||||||||||||||||  |||| || |||||||    
T  28224847 tatttactatcaatattacttacaaatgaataggagacaagcgggcaataagctgcgccgctagacctttttggatggcaaaacaaatcttcataaacac 28224946  T
Q  540 aacattca 547  Q
    ||||||||    
T  28224947 aacattca 28224954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 460 - 547
Target Start/End: Complemental strand, 4413306 - 4413219
Alignment:
Q  460 tacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    ||||| ||||||| ||| |||  | |||||||| |||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  4413306 tacacttgaatagaaggcaagtgggcaacaagctgcgccgctagacctttttggatggcaaaatcaatcctcatgaacacaacattca 4413219  T

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Target: chr2; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 460 - 547
Target Start/End: Original strand, 17344505 - 17344592
Alignment:
Q  460 tacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    ||||| ||||||| ||| |||| | |||||||| |||||| ||||||||||||||| | |||||||||||||||||||||||||||||    
T  17344505 tacacttgaatagaaggcaagccggcaacaagctgcgccgatagacctttttggatcgaaaaatcaatcctcgtaaacacaacattca 17344592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 460 - 538
Target Start/End: Complemental strand, 3208484 - 3208406
Alignment:
Q  460 tacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaaca 538  Q
    ||||| ||||||| ||| |||| | |||||||| ||||||||| ||||||||||||||||||| |||||||||||||||    
T  3208484 tacacttgaatagaaggcaagcgggcaacaagctgcgccgctaaacctttttggatggcaaaaccaatcctcgtaaaca 3208406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 485 - 547
Target Start/End: Complemental strand, 9685630 - 9685568
Alignment:
Q  485 caacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    |||||||| ||||||||||||||||||||||||||||| ||||| | || |||||||||||||    
T  9685630 caacaagctgcgccgctagacctttttggatggcaaaaacaatctttgtgaacacaacattca 9685568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 489 - 547
Target Start/End: Complemental strand, 18745165 - 18745107
Alignment:
Q  489 aagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    |||| ||||||||||||||||||||||||||||| |||||||  |||||||||||||||    
T  18745165 aagctgcgccgctagacctttttggatggcaaaaccaatccttataaacacaacattca 18745107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 150 - 216
Target Start/End: Complemental strand, 41890263 - 41890197
Alignment:
Q  150 taacaagtgcccttagggcttttgttaaggaaaccaaaactagtaagtttacattgaattcaacaat 216  Q
    ||||||||||||| ||||| ||||||||||||||||||| ||||| |||| ||||| ||||||||||    
T  41890263 taacaagtgccctaagggcatttgttaaggaaaccaaaagtagtaggtttgcattggattcaacaat 41890197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 460 - 545
Target Start/End: Complemental strand, 15515387 - 15515302
Alignment:
Q  460 tacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacatt 545  Q
    ||||| ||| ||| ||| || ||| |||||| | |||||||||||| |||||||||||||||| |||||||||| |||||||||||    
T  15515387 tacacttgagtagaaggcaaacaggcaacaaactgcgccgctagacttttttggatggcaaaaccaatcctcgtgaacacaacatt 15515302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 460 - 547
Target Start/End: Original strand, 13413218 - 13413305
Alignment:
Q  460 tacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    ||||| ||||||| ||  |||| |||||||||| | |||| ||| |||||||||||||||||| |||| ||| |||||||||||||||    
T  13413218 tacacttgaatagaagacaagcggacaacaagctgagccgttaggcctttttggatggcaaaaccaattctcataaacacaacattca 13413305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 500 - 547
Target Start/End: Original strand, 27502269 - 27502316
Alignment:
Q  500 ctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||    
T  27502269 ctagacctttttggattgcaaaatcaatcttcgtaaacacaacattca 27502316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 460 - 547
Target Start/End: Complemental strand, 41868147 - 41868061
Alignment:
Q  460 tacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    ||||| ||||||| | | |||| | |||||||  ||||||||||| |||||||| |||||||| ||||||||||||||||||||||||    
T  41868147 tacacttgaatagaaagcaagcgggcaacaagttgcgccgctagatctttttgg-tggcaaaaccaatcctcgtaaacacaacattca 41868061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 460 - 539
Target Start/End: Original strand, 42122684 - 42122763
Alignment:
Q  460 tacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacac 539  Q
    ||||| ||||||| ||| ||||  |||| |||| |||||||||||| |||||||||||||||| || |||||||||||||    
T  42122684 tacacttgaatagaaggcaagcgaacaataagctgcgccgctagacttttttggatggcaaaaccagtcctcgtaaacac 42122763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 460 - 546
Target Start/End: Complemental strand, 2626087 - 2626001
Alignment:
Q  460 tacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattc 546  Q
    ||||||||||||| ||| |||| |||||||||| |||||| ||||||||| | ||| |  |||| |||| |||||||||||||||||    
T  2626087 tacacatgaatagaaggcaagcggacaacaagctgcgccgttagacctttgtagatagttaaattaatcttcgtaaacacaacattc 2626001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 460 - 534
Target Start/End: Original strand, 30602356 - 30602430
Alignment:
Q  460 tacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgta 534  Q
    ||||||||||||| ||| | || | |||||||| |||| ||||| |||||||||||||||||| |||||||||||    
T  30602356 tacacatgaatagaaggcatgcgggcaacaagctgcgctgctaggcctttttggatggcaaaaccaatcctcgta 30602430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 466 - 522
Target Start/End: Complemental strand, 20143179 - 20143123
Alignment:
Q  466 tgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaa 522  Q
    ||||||| ||| || |||||||||||  |||||||||||||||||||||||||||||    
T  20143179 tgaatagaaggcaaacagacaacaagttgcgccgctagacctttttggatggcaaaa 20143123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 454 - 530
Target Start/End: Original strand, 41702133 - 41702209
Alignment:
Q  454 attacatacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcct 530  Q
    ||||| ||||||||||||| ||| |||  | |||||||| ||||| |||| |||||||||||||||||| |||||||    
T  41702133 attacttacacatgaatagaaggcaagtgggcaacaagctgcgccactaggcctttttggatggcaaaaccaatcct 41702209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 468 - 547
Target Start/End: Complemental strand, 11921436 - 11921357
Alignment:
Q  468 aataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    ||||||||| |||| |  ||||||| ||| ||||||| ||||||||||||| |||  |||||| ||||||||||||||||    
T  11921436 aataggagggaagcgggtaacaagctgcgacgctagatctttttggatggcgaaactaatcctagtaaacacaacattca 11921357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 19905531 - 19905589
Alignment:
Q  21 ttttctcaagtgaaatttcaactatcaaacacgagagagaaaataagaattaaattata 79  Q
    |||| ||||||||||| ||||| |||||| | |||||||||||| ||||||||||||||    
T  19905531 ttttttcaagtgaaatctcaaccatcaaatatgagagagaaaatgagaattaaattata 19905589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 157 - 216
Target Start/End: Original strand, 2136400 - 2136459
Alignment:
Q  157 tgcccttagggcttttgttaaggaaaccaaaactagtaagtttacattgaattcaacaat 216  Q
    ||||||||||||  |||||||||||||||||| ||||| ||||  |||| ||||||||||    
T  2136400 tgcccttagggcacttgttaaggaaaccaaaattagtaggtttgtattgtattcaacaat 2136459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 440 - 507
Target Start/End: Complemental strand, 38724052 - 38723985
Alignment:
Q  440 tatttactattaatattacatacacatgaataggaggtaagcagacaacaagccgcgccgctagacct 507  Q
    |||||||||| |||||||| ||||||| ||||||||| ||||   |||||||| || |||||||||||    
T  38724052 tatttactatcaatattacttacacataaataggaggcaagcgagcaacaagctgcaccgctagacct 38723985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 31938178 - 31938120
Alignment:
Q  21 ttttctcaagtgaaatttcaactatcaaacacgagagagaaaataagaattaaattata 79  Q
    |||||||| ||||||| ||||| ||||| || |||||||||| | ||||||||||||||    
T  31938178 ttttctcatgtgaaatctcaaccatcaatcatgagagagaaagtgagaattaaattata 31938120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 440 - 534
Target Start/End: Complemental strand, 34250247 - 34250153
Alignment:
Q  440 tatttactattaatattacatacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgta 534  Q
    |||||| ||| |||||||| |||||||||||| |||| || | ||||||||   ||||   |||| ||||||||||| |||||| ||||||||||    
T  34250247 tatttaatatcaatattacttacacatgaatatgaggcaaaccgacaacaaattgcgctattagatctttttggatgacaaaattaatcctcgta 34250153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 498 - 547
Target Start/End: Complemental strand, 26407896 - 26407847
Alignment:
Q  498 cgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    ||||| || |||| |||| |||||||||||| ||||||||||||||||||    
T  26407896 cgctaaacattttaggatagcaaaatcaatcatcgtaaacacaacattca 26407847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 172 - 213
Target Start/End: Complemental strand, 34392678 - 34392637
Alignment:
Q  172 tgttaaggaaaccaaaactagtaagtttacattgaattcaac 213  Q
    ||||||||||||||||| |||||  |||||||||||||||||    
T  34392678 tgttaaggaaaccaaaagtagtatatttacattgaattcaac 34392637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 156 - 216
Target Start/End: Complemental strand, 12695383 - 12695324
Alignment:
Q  156 gtgcccttagggcttttgttaaggaaaccaaaactagtaagtttacattgaattcaacaat 216  Q
    |||||||||||||  | ||||||||||| |||| |||||  ||||||||||||||||||||    
T  12695383 gtgcccttagggcaatggttaaggaaacaaaaa-tagtatatttacattgaattcaacaat 12695324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 19851639 - 19851695
Alignment:
Q  160 ccttagggcttttgttaaggaaaccaaaactagtaagtttacattgaattcaacaat 216  Q
    |||||||||  | ||||||||||||||||| || ||||||  |||||||||||||||    
T  19851639 ccttagggcaatggttaaggaaaccaaaacaagaaagtttgtattgaattcaacaat 19851695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 460 - 547
Target Start/End: Original strand, 102973 - 103060
Alignment:
Q  460 tacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    ||||| ||||||| ||| |||| | |||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  102973 tacacttgaatagaaggcaagcgggcaacaagttgcgccgctagacctttttggatggcaaaaccaatcctcgtaaacacaacattca 103060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 460 - 545
Target Start/End: Original strand, 5191 - 5276
Alignment:
Q  460 tacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacatt 545  Q
    ||||| ||||||| | | |||| | |||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  5191 tacacttgaatagaatgcaagcgggcaacaagctgcgccgctagacctttttggatggcaaagtcaatcctcgtgaacacaacatt 5276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0406 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0406
Description:

Target: scaffold0406; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 460 - 542
Target Start/End: Original strand, 6755 - 6837
Alignment:
Q  460 tacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaac 542  Q
    ||||| ||||||| ||| |||| | |||||||| ||| ||||||||||||||||||||||||| |||| ||||||||||||||    
T  6755 tacacttgaatagaaggcaagcgggcaacaagctgcggcgctagacctttttggatggcaaaaccaattctcgtaaacacaac 6837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 460 - 539
Target Start/End: Original strand, 33117 - 33196
Alignment:
Q  460 tacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacac 539  Q
    ||||| ||||||| ||| |||||| |||||||| || |||| |  |||||||||||| ||||||||||||||||||||||    
T  33117 tacacttgaatagaaggcaagcaggcaacaagctgcaccgccaagcctttttggatgacaaaatcaatcctcgtaaacac 33196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 497 - 547
Target Start/End: Complemental strand, 16857 - 16807
Alignment:
Q  497 ccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    ||||||||||||||||||||||||||||||| ||||| || ||||||||||    
T  16857 ccgctagacctttttggatggcaaaatcaattctcgtgaatacaacattca 16807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1768 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold1768
Description:

Target: scaffold1768; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 460 - 547
Target Start/End: Complemental strand, 424 - 337
Alignment:
Q  460 tacacatgaataggaggtaagcagacaacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    ||||| ||||||| ||| |||| | |||||||  ||||| | |  ||||||||||||||||||  |||||||||||||||||| ||||    
T  424 tacacttgaatagaaggaaagccggcaacaagatgcgccacaaagcctttttggatggcaaaactaatcctcgtaaacacaacgttca 337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 104
Target Start/End: Complemental strand, 6746 - 6663
Alignment:
Q  21 ttttctcaagtgaaatttcaactatcaaacacgagagagaaaataagaattaaattatagagaaacatggttgatgtgttttaa 104  Q
    |||||||||||| |||  |||| ||||||||  ||||||||||| |||||||||||||  | | ||||||||| ||| ||||||    
T  6746 ttttctcaagtggaatcccaaccatcaaacataagagagaaaatgagaattaaattattaaaatacatggttgttgtattttaa 6663  T

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Target: scaffold0144 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 216
Target Start/End: Original strand, 39569 - 39612
Alignment:
Q  173 gttaaggaaaccaaaactagtaagtttacattgaattcaacaat 216  Q
    |||||||||||||||| |||||  ||||||||||||||||||||    
T  39569 gttaaggaaaccaaaagtagtatatttacattgaattcaacaat 39612  T

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Target: scaffold0031 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 485 - 547
Target Start/End: Original strand, 49307 - 49369
Alignment:
Q  485 caacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    |||||||  ||||||||||||| |||| ||||| ||||||||| |||||||| || |||||||    
T  49307 caacaagttgcgccgctagaccgttttagatggaaaaatcaattctcgtaaatactacattca 49369  T

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Target: scaffold0470 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0470
Description:

Target: scaffold0470; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 547
Target Start/End: Original strand, 7496 - 7557
Alignment:
Q  486 aacaagccgcgccgctagacctttttggatggcaaaatcaatcctcgtaaacacaacattca 547  Q
    ||||||| | |||| |||| ||||||||||| ||||| |||| |||||||||| ||||||||    
T  7496 aacaagctgtgccgttagatctttttggatgacaaaaccaatactcgtaaacataacattca 7557  T

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