View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14427_high_8 (Length: 369)
Name: NF14427_high_8
Description: NF14427
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14427_high_8 |
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Alignment Details
Target: chr7 (Bit Score: 326; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 326; E-Value: 0
Query Start/End: Original strand, 15 - 348
Target Start/End: Original strand, 34187190 - 34187523
Alignment:
| Q |
15 |
atatgacaggtagaaaggactggttttcttcacttgatgcttctttttgtgatgaggtaaaattaggaaataattatgctcttaaggtcaatgggaaggg |
114 |
Q |
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| T |
34187190 |
atatgacaggtagaaaggactggttttcttcacttgatgcttctttttgtgatgaggtaaaattaggaaataattatgctcttaaggtcaatgggaaggg |
34187289 |
T |
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| Q |
115 |
tgttgtcaaacttttgattaatggagttatgcatttggtgaatgatgtattttatgtgcctgagttaaaaaataatttatttagtgtggggcaatttttg |
214 |
Q |
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| T |
34187290 |
tgttgtcaaacttttgattaatggagttatgcattttgtgaatgatgtattttatgtgcctgagttaaaaaataatttatttagtgtggggcaatttttg |
34187389 |
T |
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| Q |
215 |
gaaagaggattgaatgttgaaatgaagcaaaacaagtgtagtgtgtttaatgaaaagggccttattttcgaaacatacatgactactaaccgtatgtttg |
314 |
Q |
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| T |
34187390 |
gaaagaggattgaatgttgaaatgaagcaaaacaagtgtagtgtgtttaatgaaaagggtcttattttcgaaacatacatgactactaaccgtatgtttg |
34187489 |
T |
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| Q |
315 |
ctatgagcgtaaaatctggagtttctcaaccttg |
348 |
Q |
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| T |
34187490 |
ctatgagcgtaaaatctggagtttctcaaccttg |
34187523 |
T |
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