View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14428_high_1 (Length: 733)

Name: NF14428_high_1
Description: NF14428
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14428_high_1
NF14428_high_1
[»] chr7 (37 HSPs)
chr7 (519-721)||(38167541-38167744)
chr7 (48-125)||(22629539-22629616)
chr7 (48-127)||(18372428-18372507)
chr7 (47-127)||(14999125-14999205)
chr7 (48-124)||(7500508-7500584)
chr7 (51-110)||(14998048-14998107)
chr7 (48-123)||(18371479-18371554)
chr7 (48-127)||(31659674-31659753)
chr7 (21-127)||(3227538-3227644)
chr7 (21-127)||(31949373-31949479)
chr7 (47-127)||(42886256-42886336)
chr7 (48-127)||(7501823-7501902)
chr7 (48-127)||(22630423-22630502)
chr7 (21-95)||(31949746-31949820)
chr7 (50-119)||(21505473-21505542)
chr7 (22-114)||(30439303-30439395)
chr7 (48-123)||(47369836-47369911)
chr7 (21-127)||(3227158-3227264)
chr7 (21-95)||(17781744-17781818)
chr7 (20-123)||(597229-597330)
chr7 (47-107)||(770731-770791)
chr7 (519-563)||(47019902-47019946)
chr7 (21-128)||(127386-127492)
chr7 (488-563)||(44509497-44509572)
chr7 (33-95)||(47525323-47525385)
chr7 (51-108)||(21508407-21508464)
chr7 (47-95)||(32253397-32253445)
chr7 (519-563)||(38742521-38742565)
chr7 (519-563)||(41118033-41118077)
chr7 (519-563)||(47455754-47455798)
chr7 (520-563)||(25105888-25105931)
chr7 (48-127)||(46482648-46482727)
chr7 (21-127)||(128545-128651)
chr7 (34-72)||(327349-327387)
chr7 (86-128)||(34352795-34352837)
chr7 (519-560)||(5543616-5543657)
chr7 (519-560)||(31622660-31622701)
[»] chr5 (34 HSPs)
chr5 (18-127)||(42195183-42195292)
chr5 (37-128)||(16650042-16650133)
chr5 (18-128)||(25055462-25055572)
chr5 (21-120)||(42196144-42196243)
chr5 (48-127)||(18486873-18486952)
chr5 (48-127)||(19752962-19753041)
chr5 (37-120)||(24332971-24333053)
chr5 (47-127)||(36486458-36486538)
chr5 (40-127)||(16650818-16650905)
chr5 (49-127)||(25523120-25523198)
chr5 (48-125)||(25524069-25524146)
chr5 (47-124)||(28539790-28539867)
chr5 (40-120)||(2186828-2186908)
chr5 (47-123)||(28538731-28538807)
chr5 (48-123)||(2686372-2686447)
chr5 (48-127)||(19754101-19754180)
chr5 (40-127)||(22940586-22940672)
chr5 (476-570)||(11255325-11255418)
chr5 (478-570)||(8781495-8781587)
chr5 (21-127)||(5730806-5730912)
chr5 (33-127)||(5778792-5778886)
chr5 (506-563)||(10691346-10691403)
chr5 (506-563)||(15471987-15472044)
chr5 (48-105)||(18485218-18485275)
chr5 (47-123)||(36485355-36485431)
chr5 (69-114)||(1797289-1797334)
chr5 (62-127)||(21835091-21835156)
chr5 (495-560)||(25032046-25032111)
chr5 (519-563)||(8835875-8835919)
chr5 (519-563)||(31377571-31377615)
chr5 (522-570)||(33569351-33569399)
chr5 (505-563)||(18618137-18618195)
chr5 (62-127)||(5777950-5778015)
chr5 (519-560)||(6230986-6231027)
[»] scaffold0019 (2 HSPs)
scaffold0019 (21-127)||(61403-61509)
scaffold0019 (20-127)||(60141-60248)
[»] chr2 (37 HSPs)
chr2 (20-125)||(18299426-18299531)
chr2 (20-127)||(24475275-24475382)
chr2 (21-127)||(18300669-18300774)
chr2 (18-127)||(11996758-11996867)
chr2 (40-127)||(11258774-11258861)
chr2 (37-119)||(22587559-22587640)
chr2 (46-127)||(22587923-22588004)
chr2 (48-128)||(22848241-22848321)
chr2 (49-120)||(802563-802634)
chr2 (20-123)||(18904422-18904524)
chr2 (40-125)||(26544201-26544286)
chr2 (49-120)||(810753-810824)
chr2 (48-127)||(13030340-13030419)
chr2 (40-107)||(26545484-26545551)
chr2 (18-114)||(18797311-18797407)
chr2 (48-127)||(18905959-18906037)
chr2 (53-127)||(23869511-23869585)
chr2 (37-127)||(28617973-28618062)
chr2 (506-563)||(1221748-1221805)
chr2 (36-125)||(7898744-7898832)
chr2 (47-128)||(7899852-7899933)
chr2 (48-124)||(18869133-18869210)
chr2 (20-84)||(24476802-24476866)
chr2 (495-563)||(31546610-31546678)
chr2 (47-127)||(38839293-38839373)
chr2 (47-127)||(38840463-38840543)
chr2 (47-127)||(41878145-41878225)
chr2 (488-563)||(26479096-26479171)
chr2 (48-126)||(11257673-11257751)
chr2 (519-563)||(2358076-2358120)
chr2 (48-128)||(36450892-36450972)
chr2 (48-123)||(8535627-8535702)
chr2 (488-563)||(21866523-21866598)
chr2 (48-90)||(21837127-21837169)
chr2 (519-560)||(2371436-2371477)
chr2 (519-560)||(30786643-30786684)
chr2 (519-564)||(39429270-39429315)
[»] chr1 (62 HSPs)
chr1 (18-109)||(35595133-35595223)
chr1 (32-127)||(51684417-51684512)
chr1 (37-120)||(39153077-39153159)
chr1 (48-127)||(43058836-43058915)
chr1 (37-127)||(45157170-45157259)
chr1 (37-127)||(39151982-39152071)
chr1 (40-128)||(11437162-11437250)
chr1 (47-127)||(39699737-39699817)
chr1 (40-120)||(51685728-51685808)
chr1 (40-123)||(11436097-11436180)
chr1 (48-127)||(24422851-24422930)
chr1 (40-127)||(24426038-24426125)
chr1 (48-127)||(50680382-50680461)
chr1 (47-125)||(40384778-40384856)
chr1 (40-128)||(43378676-43378764)
chr1 (47-127)||(44404493-44404573)
chr1 (47-127)||(45148632-45148711)
chr1 (48-127)||(36613875-36613954)
chr1 (48-123)||(43059977-43060052)
chr1 (48-127)||(52275019-52275098)
chr1 (21-126)||(52828014-52828119)
chr1 (66-126)||(23980455-23980515)
chr1 (51-123)||(36612907-36612979)
chr1 (48-127)||(39222444-39222523)
chr1 (40-127)||(52276126-52276213)
chr1 (48-114)||(37526849-37526914)
chr1 (48-90)||(39221402-39221444)
chr1 (21-95)||(41364911-41364985)
chr1 (46-120)||(45156107-45156181)
chr1 (488-570)||(49740601-49740683)
chr1 (21-95)||(52827430-52827504)
chr1 (18-127)||(35594267-35594375)
chr1 (47-128)||(44411936-44412017)
chr1 (47-123)||(45149940-45150017)
chr1 (478-570)||(17924993-17925085)
chr1 (48-128)||(25652764-25652844)
chr1 (47-127)||(39698614-39698693)
chr1 (476-579)||(18605927-18606030)
chr1 (488-563)||(28225563-28225638)
chr1 (488-563)||(49457526-49457601)
chr1 (505-563)||(8896248-8896306)
chr1 (62-120)||(31194111-31194169)
chr1 (505-563)||(37093235-37093293)
chr1 (18-104)||(46525742-46525827)
chr1 (519-560)||(11335087-11335128)
chr1 (519-560)||(11493107-11493148)
chr1 (62-123)||(33088602-33088663)
chr1 (519-564)||(48541945-48541990)
chr1 (495-563)||(3771243-3771311)
chr1 (519-563)||(15475323-15475367)
chr1 (519-563)||(15910411-15910455)
chr1 (48-127)||(35066973-35067052)
chr1 (32-95)||(41366086-41366149)
chr1 (505-563)||(3047541-3047599)
chr1 (34-72)||(13574922-13574960)
chr1 (47-127)||(14999335-14999412)
chr1 (18-104)||(46524613-46524698)
chr1 (40-109)||(2940334-2940403)
chr1 (68-125)||(7675450-7675507)
chr1 (519-560)||(29033165-29033206)
chr1 (35-120)||(46066581-46066665)
chr1 (519-560)||(50501424-50501465)
[»] chr8 (53 HSPs)
chr8 (18-127)||(22220439-22220548)
chr8 (37-125)||(30336461-30336549)
chr8 (48-128)||(1824049-1824129)
chr8 (48-128)||(1858494-1858574)
chr8 (48-127)||(10007734-10007813)
chr8 (22-114)||(2379869-2379961)
chr8 (47-127)||(24122933-24123013)
chr8 (40-124)||(30335693-30335777)
chr8 (40-120)||(43661323-43661403)
chr8 (48-127)||(5514032-5514111)
chr8 (48-127)||(10006395-10006474)
chr8 (481-579)||(1103858-1103956)
chr8 (32-120)||(8389644-8389732)
chr8 (46-120)||(30568944-30569018)
chr8 (54-126)||(32207302-32207374)
chr8 (47-95)||(24123868-24123916)
chr8 (40-120)||(43661786-43661866)
chr8 (37-128)||(18488223-18488313)
chr8 (46-120)||(30570225-30570299)
chr8 (489-563)||(36782268-36782342)
chr8 (62-127)||(18978070-18978135)
chr8 (46-127)||(29043449-29043530)
chr8 (49-124)||(1823606-1823682)
chr8 (49-124)||(1858051-1858127)
chr8 (47-127)||(8388513-8388593)
chr8 (48-108)||(11456679-11456739)
chr8 (47-127)||(29968307-29968387)
chr8 (488-563)||(29998381-29998456)
chr8 (481-571)||(13175803-13175891)
chr8 (37-119)||(40471107-40471189)
chr8 (18-94)||(2378944-2379020)
chr8 (47-127)||(18970961-18971041)
chr8 (488-560)||(30699333-30699405)
chr8 (519-563)||(31097975-31098019)
chr8 (48-127)||(22221335-22221414)
chr8 (48-127)||(22227677-22227756)
chr8 (40-119)||(24359866-24359945)
chr8 (19-109)||(11283152-11283241)
chr8 (505-563)||(32834887-32834945)
chr8 (47-127)||(12353331-12353410)
chr8 (49-125)||(17844328-17844403)
chr8 (488-560)||(35392843-35392915)
chr8 (614-665)||(13175712-13175763)
chr8 (43-94)||(40469424-40469475)
chr8 (66-124)||(5514260-5514317)
chr8 (34-84)||(11289045-11289095)
chr8 (505-563)||(12987471-12987529)
chr8 (505-563)||(24757287-24757345)
chr8 (48-114)||(32973907-32973973)
chr8 (33-62)||(6041368-6041397)
chr8 (33-62)||(6045005-6045034)
chr8 (32-109)||(11282077-11282154)
chr8 (75-124)||(45112923-45112972)
[»] chr3 (51 HSPs)
chr3 (32-127)||(46721175-46721270)
chr3 (21-127)||(46719992-46720097)
chr3 (40-127)||(7758453-7758540)
chr3 (37-127)||(19984900-19984989)
chr3 (476-579)||(41457487-41457590)
chr3 (37-114)||(19986031-19986107)
chr3 (40-120)||(23770370-23770450)
chr3 (48-108)||(47615548-47615608)
chr3 (47-123)||(54540760-54540836)
chr3 (48-127)||(12700224-12700303)
chr3 (49-127)||(34019117-34019195)
chr3 (21-125)||(534552-534656)
chr3 (47-127)||(7267694-7267774)
chr3 (21-128)||(51470399-51470506)
chr3 (40-114)||(23769921-23769994)
chr3 (21-95)||(51470055-51470129)
chr3 (66-127)||(12703489-12703550)
chr3 (40-128)||(8456527-8456615)
chr3 (48-120)||(8875964-8876036)
chr3 (488-563)||(10660298-10660373)
chr3 (40-119)||(40426741-40426820)
chr3 (48-127)||(47614236-47614315)
chr3 (65-127)||(22776800-22776862)
chr3 (33-127)||(47610536-47610630)
chr3 (47-128)||(54986977-54987058)
chr3 (47-127)||(31645024-31645104)
chr3 (48-127)||(29931277-29931356)
chr3 (48-127)||(29980431-29980510)
chr3 (40-95)||(47609780-47609835)
chr3 (488-563)||(51166528-51166603)
chr3 (48-127)||(54539806-54539885)
chr3 (505-563)||(3020010-3020068)
chr3 (476-542)||(35512548-35512614)
chr3 (519-564)||(8067892-8067937)
chr3 (519-563)||(2446641-2446685)
chr3 (48-128)||(11670434-11670514)
chr3 (488-560)||(33584041-33584113)
chr3 (48-127)||(6171214-6171292)
chr3 (505-560)||(27450112-27450167)
chr3 (40-127)||(29932662-29932749)
chr3 (40-127)||(29981816-29981903)
chr3 (488-563)||(51755090-51755165)
chr3 (488-563)||(55273600-55273674)
chr3 (34-84)||(8240633-8240683)
chr3 (506-560)||(24349937-24349991)
chr3 (519-560)||(5272878-5272919)
chr3 (519-560)||(20607046-20607087)
chr3 (519-560)||(26974902-26974943)
chr3 (519-564)||(37821763-37821808)
chr3 (519-560)||(46529228-46529269)
chr3 (18-127)||(51038731-51038840)
[»] scaffold1303 (1 HSPs)
scaffold1303 (21-127)||(1490-1596)
[»] chr4 (48 HSPs)
chr4 (18-127)||(1834170-1834280)
chr4 (37-127)||(10448221-10448310)
chr4 (29-127)||(49307980-49308077)
chr4 (40-124)||(1290161-1290245)
chr4 (20-125)||(33296276-33296381)
chr4 (47-127)||(31599840-31599920)
chr4 (40-114)||(13509322-13509396)
chr4 (21-124)||(25684988-25685091)
chr4 (21-127)||(5525410-5525516)
chr4 (478-579)||(11379892-11379991)
chr4 (18-127)||(1835043-1835152)
chr4 (40-125)||(37728528-37728613)
chr4 (48-128)||(8155787-8155867)
chr4 (478-570)||(11309974-11310066)
chr4 (47-127)||(35935503-35935583)
chr4 (476-564)||(44878983-44879071)
chr4 (40-127)||(19750538-19750625)
chr4 (40-127)||(19789181-19789268)
chr4 (20-123)||(49306829-49306931)
chr4 (33-95)||(10470629-10470691)
chr4 (40-124)||(1289151-1289235)
chr4 (488-564)||(7553489-7553565)
chr4 (47-127)||(31600955-31601035)
chr4 (47-114)||(50909642-50909710)
chr4 (48-127)||(8757725-8757804)
chr4 (48-123)||(12129678-12129753)
chr4 (488-563)||(39677084-39677159)
chr4 (488-563)||(45885711-45885786)
chr4 (37-127)||(10447058-10447147)
chr4 (33-127)||(10471344-10471438)
chr4 (21-95)||(13386476-13386550)
chr4 (33-127)||(25685778-25685872)
chr4 (48-128)||(17388182-17388262)
chr4 (32-128)||(46638680-46638776)
chr4 (48-124)||(52491578-52491654)
chr4 (48-114)||(3927730-3927796)
chr4 (509-563)||(7326933-7326987)
chr4 (49-127)||(8758809-8758887)
chr4 (33-95)||(13386099-13386161)
chr4 (519-560)||(3874932-3874973)
chr4 (48-128)||(17383042-17383122)
chr4 (37-128)||(35934392-35934482)
chr4 (505-560)||(36224470-36224525)
chr4 (33-95)||(5526082-5526144)
chr4 (476-513)||(23114498-23114535)
chr4 (62-127)||(48780299-48780364)
chr4 (519-560)||(50622393-50622434)
chr4 (494-563)||(55281644-55281713)
[»] scaffold0045 (1 HSPs)
scaffold0045 (18-127)||(48358-48466)
[»] chr6 (29 HSPs)
chr6 (47-127)||(1829573-1829653)
chr6 (22-114)||(27437892-27437984)
chr6 (45-126)||(5658808-5658889)
chr6 (48-127)||(7314930-7315009)
chr6 (236-287)||(28899113-28899164)
chr6 (48-114)||(7316265-7316331)
chr6 (49-127)||(16704469-16704547)
chr6 (33-127)||(8659316-8659410)
chr6 (37-127)||(26949146-26949235)
chr6 (21-95)||(34834523-34834597)
chr6 (21-90)||(3722467-3722536)
chr6 (62-127)||(10784644-10784709)
chr6 (48-124)||(17496851-17496928)
chr6 (47-123)||(26575024-26575100)
chr6 (32-127)||(6842238-6842333)
chr6 (32-127)||(8660159-8660254)
chr6 (488-563)||(18676041-18676116)
chr6 (36-94)||(26717072-26717130)
chr6 (62-127)||(3333011-3333076)
chr6 (33-94)||(3721696-3721757)
chr6 (62-127)||(10785898-10785963)
chr6 (47-124)||(26574673-26574749)
chr6 (519-560)||(28913542-28913583)
chr6 (38-114)||(3333486-3333562)
chr6 (519-563)||(33490375-33490419)
chr6 (36-127)||(34830953-34831044)
chr6 (506-563)||(742223-742280)
chr6 (62-119)||(6840251-6840308)
chr6 (18-127)||(12382652-12382761)
[»] scaffold0003 (1 HSPs)
scaffold0003 (22-114)||(49378-49470)
[»] scaffold0320 (1 HSPs)
scaffold0320 (48-127)||(19539-19618)
[»] scaffold0548 (1 HSPs)
scaffold0548 (478-570)||(8336-8428)
[»] scaffold2034 (2 HSPs)
scaffold2034 (62-128)||(283-349)
scaffold2034 (62-120)||(963-1021)
[»] scaffold0632 (1 HSPs)
scaffold0632 (62-120)||(3293-3351)
[»] scaffold0586 (2 HSPs)
scaffold0586 (62-127)||(6394-6459)
scaffold0586 (48-125)||(8998-9074)
[»] scaffold0081 (1 HSPs)
scaffold0081 (476-565)||(12198-12286)
[»] scaffold0049 (2 HSPs)
scaffold0049 (62-127)||(7400-7465)
scaffold0049 (38-91)||(7880-7933)
[»] scaffold0294 (1 HSPs)
scaffold0294 (40-123)||(5401-5484)
[»] scaffold0562 (1 HSPs)
scaffold0562 (519-560)||(5751-5792)
[»] scaffold0041 (1 HSPs)
scaffold0041 (519-563)||(104919-104963)
[»] scaffold0112 (1 HSPs)
scaffold0112 (40-127)||(37198-37285)
[»] scaffold0017 (1 HSPs)
scaffold0017 (34-84)||(27850-27900)
[»] scaffold0302 (1 HSPs)
scaffold0302 (47-128)||(18746-18827)
[»] scaffold0057 (1 HSPs)
scaffold0057 (519-560)||(42060-42101)


Alignment Details
Target: chr7 (Bit Score: 100; Significance: 4e-49; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 519 - 721
Target Start/End: Original strand, 38167541 - 38167744
Alignment:
Q  519 gaatgaccaatatatcctttaactgaaataaaaatttcaaattaatcaaaaactttttcattacatcgct-aattactcaaacactagaaacttaattca 617  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| |||||| ||||||  ||||||| ||| |||||||| || |||||||||||||    
T  38167541 gaatgaccaatatatgctttaactgaaataaaaatttcaaattaatccaaaactctttcatcgcatcgcttaatcactcaaaccctggaaacttaattca 38167640  T
Q  618 cgtattcatcattcaaaccccataaacttagttcacatattcatcatctgaaacactcacattgtcgtttttaaaagtcaccgatgttttcacctattca 717  Q
    |||||||||| |||||||| || ||||||||||||  |||||||||||| |||||||||||   |||||||| |||| || |  ||||||||| | ||||    
T  38167641 cgtattcatcgttcaaacctcaaaaacttagttcatgtattcatcatctcaaacactcacaccatcgttttttaaagccatcattgttttcacatgttca 38167740  T
Q  718 tctc 721  Q
    ||||    
T  38167741 tctc 38167744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 48 - 125
Target Start/End: Complemental strand, 22629616 - 22629539
Alignment:
Q  48 gtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagg 125  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||||||| ||||||||||    
T  22629616 gtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaatcttagggggccaaaattgtagtttttgtacttagg 22629539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 48 - 127
Target Start/End: Original strand, 18372428 - 18372507
Alignment:
Q  48 gtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||| || ||||||||||||||| ||||||||||||    
T  18372428 gtcaaaattgaccaaaaggaccaaagatacaaaggggctaaatcttagggggccaaaattgtagtttttgtacttagggg 18372507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 47 - 127
Target Start/End: Original strand, 14999125 - 14999205
Alignment:
Q  47 ggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| |  ||||||||||||||| |||| |||||||    
T  14999125 ggtcaaaattgacctaaaggaacaaagatgcaaaggggctaaatcttagggcgccaaaattgtagtttttgtatttagggg 14999205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 48 - 124
Target Start/End: Complemental strand, 7500584 - 7500508
Alignment:
Q  48 gtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttag 124  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||| || |||||||||| |||| | |||||||    
T  7500584 gtcaaaattgaccaaaaggatcaaagatgcaaaggggctaaatcttagggggccaaaattgtggtttctatacttag 7500508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 51 - 110
Target Start/End: Complemental strand, 14998107 - 14998048
Alignment:
Q  51 aaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgta 110  Q
    |||||||||| |||||||||||||||||||||||||||||||||| || |||||||||||    
T  14998107 aaaattgaccaaaaggaccaaagatgcaaaggggctaaatcttagggggccaaaattgta 14998048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 48 - 123
Target Start/End: Complemental strand, 18371554 - 18371479
Alignment:
Q  48 gtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtactta 123  Q
    ||||||||||||| |||||| |||||||||||| | |||||||||||| || ||||||||||||||| ||||||||    
T  18371554 gtcaaaattgaccaaaaggatcaaagatgcaaatgtgctaaatcttagggggccaaaattgtagtttttgtactta 18371479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 48 - 127
Target Start/End: Complemental strand, 31659753 - 31659674
Alignment:
Q  48 gtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    ||||||||||||| |||||| ||||  ||||| ||||||||||||||| || ||||||||||||||| ||||||||||||    
T  31659753 gtcaaaattgaccaaaaggatcaaatttgcaatggggctaaatcttagggggccaaaattgtagtttttgtacttagggg 31659674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 21 - 127
Target Start/End: Original strand, 3227538 - 3227644
Alignment:
Q  21 gtggcatgtccaatcagcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtac 120  Q
    |||||||| | ||||||| |||||| |||||||||||| | |||||||||||| ||||| ||||||||||||||| ||  | ||||||| ||||  ||||    
T  3227538 gtggcatgccaaatcagcgttgactaggtcaaaattgatcaaaaggaccaaagttgcaatggggctaaatcttaggggtgctaaattgtggttttggtac 3227637  T
Q  121 ttagggg 127  Q
    |||||||    
T  3227638 ttagggg 3227644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 21 - 127
Target Start/End: Complemental strand, 31949479 - 31949373
Alignment:
Q  21 gtggcatgtccaatcagcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtac 120  Q
    |||||||| | ||||||| |||||| |||||||||||| | |||||||||||| ||||| ||||||||||||||| ||  | ||||||| ||||  ||||    
T  31949479 gtggcatgccaaatcagcgttgactaggtcaaaattgatcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtac 31949380  T
Q  121 ttagggg 127  Q
    |||||||    
T  31949379 ttagggg 31949373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 47 - 127
Target Start/End: Original strand, 42886256 - 42886336
Alignment:
Q  47 ggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    |||||||||||||| ||| || |||||||||||| |||||||||||||| || | ||||||||||||| |||| |||||||    
T  42886256 ggtcaaaattgaccaaaatgatcaaagatgcaaatgggctaaatcttagggggctaaaattgtagtttttgtatttagggg 42886336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 48 - 127
Target Start/End: Original strand, 7501823 - 7501902
Alignment:
Q  48 gtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||  || |||||||||| ||||   ||||||||||    
T  7501823 gtcaaaattgaccaaaaggaccaaagatgcaaaggggctacatcttaaggggccaaaattgttgttttgatacttagggg 7501902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 48 - 127
Target Start/End: Original strand, 22630423 - 22630502
Alignment:
Q  48 gtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    ||||||||||||| |||||||||||||| ||||| |||| |||||||| || | ||||||||||||| |||| |||||||    
T  22630423 gtcaaaattgaccaaaaggaccaaagatacaaagaggctgaatcttagggggctaaaattgtagtttttgtaattagggg 22630502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 21 - 95
Target Start/End: Original strand, 31949746 - 31949820
Alignment:
Q  21 gtggcatgtccaatcagcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttag 95  Q
    |||||||| | ||||||| |||||| |||||||||||| | |||||||||||| ||||| |||||||||||||||    
T  31949746 gtggcatgccaaatcagcgttgactaggtcaaaattgatcaaaaggaccaaagttgcaatggggctaaatcttag 31949820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 50 - 119
Target Start/End: Complemental strand, 21505542 - 21505473
Alignment:
Q  50 caaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgta 119  Q
    |||||||| || |||||||||||||||||||||||||||||||||  ||  |||||||||||||| ||||    
T  21505542 caaaattgtccaaaaggaccaaagatgcaaaggggctaaatcttatggggtcaaaattgtagtttttgta 21505473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 22 - 114
Target Start/End: Original strand, 30439303 - 30439395
Alignment:
Q  22 tggcatgtccaatcagcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagttt 114  Q
    ||||||||| | ||||  ||||||  ||||||||||| | ||| |||| ||| ||||||||||||||||||||| |||| |||||||||||||    
T  30439303 tggcatgtcaagtcagtgttgactaagtcaaaattgagcaaaatgaccgaaggtgcaaaggggctaaatcttaggggactaaaattgtagttt 30439395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 48 - 123
Target Start/End: Complemental strand, 47369911 - 47369836
Alignment:
Q  48 gtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtactta 123  Q
    ||||||||||||| |||  || |||||||||||||||||||||||||  || |||||||| |||||| ||||||||    
T  47369911 gtcaaaattgaccaaaataactaaagatgcaaaggggctaaatcttaaggggccaaaattatagtttttgtactta 47369836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 127
Target Start/End: Complemental strand, 3227264 - 3227158
Alignment:
Q  21 gtggcatgtccaatcagcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtac 120  Q
    |||||||| | ||||||| |||||| |||||||||||  | |||||||||||| ||||| ||||||||||||||  ||  | ||||||| ||||  ||||    
T  3227264 gtggcatgccaaatcagcgttgactaggtcaaaattgttcaaaaggaccaaagttgcaatggggctaaatcttaagggggctaaattgtggttttggtac 3227165  T
Q  121 ttagggg 127  Q
    |||||||    
T  3227164 ttagggg 3227158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 95
Target Start/End: Complemental strand, 17781818 - 17781744
Alignment:
Q  21 gtggcatgtccaatcagcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttag 95  Q
    |||||||| | |||| || ||||||||||||||||||  | |||||||||||| ||||| |||||||||||||||    
T  17781818 gtggcatgccaaatcggcgttgacttggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttag 17781744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 123
Target Start/End: Original strand, 597229 - 597330
Alignment:
Q  20 cgtggcatgtccaatcagcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgta 119  Q
    |||| ||||||||||||| ||||||| ||| |||||||| | ||| |||||| |||||||| || |||||  ||| |||  |||||||||||||| ||||    
T  597229 cgtgtcatgtccaatcagaattgactcggttaaaattgatcaaaatgaccaaggatgcaaatggactaaa--ttatagggtcaaaattgtagtttttgta 597326  T
Q  120 ctta 123  Q
    ||||    
T  597327 ctta 597330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 107
Target Start/End: Original strand, 770731 - 770791
Alignment:
Q  47 ggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaatt 107  Q
    |||||||||||||| ||| || |||||||||||||||||||||| |||| || ||||||||    
T  770731 ggtcaaaattgaccaaaatgatcaaagatgcaaaggggctaaattttagggggccaaaatt 770791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 519 - 563
Target Start/End: Original strand, 47019902 - 47019946
Alignment:
Q  519 gaatgaccaatatatcctttaactgaaataaaaatttcaaattaa 563  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||    
T  47019902 gaatgactaatatatcctttaactaaaataaaaatttcaaattaa 47019946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 21 - 128
Target Start/End: Complemental strand, 127492 - 127386
Alignment:
Q  21 gtggcatgtccaatcagcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtac 120  Q
    |||||||| | ||||||| |||||| |||||||||||  | |||||||||||| |||||  |||||||||||||| ||  | ||||||| ||||  ||||    
T  127492 gtggcatgccaaatcagcgttgactaggtcaaaattggtcaaaaggaccaaagttgcaattgggctaaatcttag-ggggctaaattgtggttttggtac 127394  T
Q  121 ttagggga 128  Q
    ||||||||    
T  127393 ttagggga 127386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 488 - 563
Target Start/End: Complemental strand, 44509572 - 44509497
Alignment:
Q  488 tcacactccaaaaaactcaagttacatcttggaatgaccaatatatcctttaactgaaataaaaatttcaaattaa 563  Q
    |||||| |||||||   ||||||||| ||  ||||||| |||||| ||||||||| ||||||||||||||||||||    
T  44509572 tcacaccccaaaaacaacaagttacacctcagaatgactaatataccctttaactaaaataaaaatttcaaattaa 44509497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 95
Target Start/End: Original strand, 47525323 - 47525385
Alignment:
Q  33 atcagcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttag 95  Q
    |||||| |||||| |||||||||||  | |||||||||||| ||||| |||||||||||||||    
T  47525323 atcagcgttgactaggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttag 47525385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 108
Target Start/End: Original strand, 21508407 - 21508464
Alignment:
Q  51 aaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattg 108  Q
    |||||||||| ||| || ||||||||||||  |||||||||||||||| |||||||||    
T  21508407 aaaattgaccaaaaagatcaaagatgcaaattggctaaatcttagagggccaaaattg 21508464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 32253397 - 32253445
Alignment:
Q  47 ggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttag 95  Q
    ||||||||||  || |||||||||||||||||||||| |||||||||||    
T  32253397 ggtcaaaatttgccaaaaggaccaaagatgcaaagggactaaatcttag 32253445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 519 - 563
Target Start/End: Original strand, 38742521 - 38742565
Alignment:
Q  519 gaatgaccaatatatcctttaactgaaataaaaatttcaaattaa 563  Q
    ||||||| |||||| ||||||||| ||||||||||||||||||||    
T  38742521 gaatgactaatataccctttaactaaaataaaaatttcaaattaa 38742565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 519 - 563
Target Start/End: Original strand, 41118033 - 41118077
Alignment:
Q  519 gaatgaccaatatatcctttaactgaaataaaaatttcaaattaa 563  Q
    ||||||| |||||| ||||||||| ||||||||||||||||||||    
T  41118033 gaatgactaatataccctttaactaaaataaaaatttcaaattaa 41118077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 519 - 563
Target Start/End: Complemental strand, 47455798 - 47455754
Alignment:
Q  519 gaatgaccaatatatcctttaactgaaataaaaatttcaaattaa 563  Q
    ||||||| |||||| ||||||||| ||||||||||||||||||||    
T  47455798 gaatgactaatataccctttaactaaaataaaaatttcaaattaa 47455754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 520 - 563
Target Start/End: Complemental strand, 25105931 - 25105888
Alignment:
Q  520 aatgaccaatatatcctttaactgaaataaaaatttcaaattaa 563  Q
    |||||| |||||| ||||||||| ||||||||||||||||||||    
T  25105931 aatgactaatataccctttaactaaaataaaaatttcaaattaa 25105888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 127
Target Start/End: Complemental strand, 46482727 - 46482648
Alignment:
Q  48 gtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    ||||||||||||| ||||||  ||| ||||||||| | |||||||||| |||  |||||| |||||| ||||| ||||||    
T  46482727 gtcaaaattgaccaaaaggataaaaaatgcaaaggagataaatcttaggggattaaaattatagtttttgtacatagggg 46482648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 127
Target Start/End: Original strand, 128545 - 128651
Alignment:
Q  21 gtggcatgtccaatcagcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtac 120  Q
    |||||||| | |||||||||||||| |||||||||||    |||||  ||||| ||||| |||||| |||||||| ||  | ||||||| ||||  ||||    
T  128545 gtggcatgccaaatcagcattgactaggtcaaaattggttaaaagggtcaaagttgcaatggggctgaatcttaggggggctaaattgtggttttggtac 128644  T
Q  121 ttagggg 127  Q
    |||||||    
T  128645 ttagggg 128651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 34 - 72
Target Start/End: Original strand, 327349 - 327387
Alignment:
Q  34 tcagcattgacttggtcaaaattgacctaaaggaccaaa 72  Q
    |||||||||||||||||||||||||||||| || |||||    
T  327349 tcagcattgacttggtcaaaattgacctaaggggccaaa 327387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 86 - 128
Target Start/End: Original strand, 34352795 - 34352837
Alignment:
Q  86 taaatcttagaggaccaaaattgtagtttatgtacttagggga 128  Q
    ||||||||||||| |||||||| ||||||||||||||| ||||    
T  34352795 taaatcttagagggccaaaattatagtttatgtacttaaggga 34352837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 519 - 560
Target Start/End: Original strand, 5543616 - 5543657
Alignment:
Q  519 gaatgaccaatatatcctttaactgaaataaaaatttcaaat 560  Q
    ||||||| |||||| ||||||||| |||||||||||||||||    
T  5543616 gaatgactaatataccctttaactaaaataaaaatttcaaat 5543657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 519 - 560
Target Start/End: Complemental strand, 31622701 - 31622660
Alignment:
Q  519 gaatgaccaatatatcctttaactgaaataaaaatttcaaat 560  Q
    ||||||| |||||| ||||||||| |||||||||||||||||    
T  31622701 gaatgactaatataccctttaactaaaataaaaatttcaaat 31622660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 78; Significance: 6e-36; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 42195292 - 42195183
Alignment:
Q  18 cacgtggcatgtccaatcagcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatg 117  Q
    ||||||||||| | ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| || ||    
T  42195292 cacgtggcatgccaaatcagcgttgacttggtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaatcttaggggaccaaaattgtagattttg 42195193  T
Q  118 tacttagggg 127  Q
    ||| ||||||    
T  42195192 tacatagggg 42195183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 37 - 128
Target Start/End: Complemental strand, 16650133 - 16650042
Alignment:
Q  37 gcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggga 128  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||  |||||||||||||| |||||||||||||    
T  16650133 gcattgacttggtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttagagggtcaaaattgtagtttttgtacttagggga 16650042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 25055572 - 25055462
Alignment:
Q  18 cacgtggcatgtccaatcagcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatg 117  Q
    ||||||||||| | |||||||||||||||| |||||||||| | ||||||||||||||||||| |||||||||||||| || ||||||||||||||| |     
T  25055572 cacgtggcatgccaaatcagcattgacttgctcaaaattgatcaaaaggaccaaagatgcaaatgggctaaatcttagggggccaaaattgtagttttta 25055473  T
Q  118 tacttagggga 128  Q
    ||| |||||||    
T  25055472 tacatagggga 25055462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 21 - 120
Target Start/End: Original strand, 42196144 - 42196243
Alignment:
Q  21 gtggcatgtccaatcagcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtac 120  Q
    |||||||| | ||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| |||| |||| |||||||| |||||    
T  42196144 gtggcatgccaaatcagcgttgacttggtcaaaattgaccaaaaggaccaaagatgcaaatgggctaaatcttaggggactaaaaatgtagtttttgtac 42196243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 48 - 127
Target Start/End: Original strand, 18486873 - 18486952
Alignment:
Q  48 gtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| || |||||||||| |||| | ||||||||||    
T  18486873 gtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaatcttagggggccaaaattgtggtttctatacttagggg 18486952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 48 - 127
Target Start/End: Complemental strand, 19753041 - 19752962
Alignment:
Q  48 gtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    ||||||||||||| |||||||||||||||||| ||||||||||| ||| || ||||||||||||||| ||||||||||||    
T  19753041 gtcaaaattgaccaaaaggaccaaagatgcaatggggctaaatcatagggggccaaaattgtagtttttgtacttagggg 19752962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 24333053 - 24332971
Alignment:
Q  37 gcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtac 120  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||  |||||||||||||| |||||    
T  24333053 gcattgact-ggtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttagagggtcaaaattgtagtttttgtac 24332971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 47 - 127
Target Start/End: Original strand, 36486458 - 36486538
Alignment:
Q  47 ggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    |||||||||||||  |||||| ||||| ||||||||| ||||||||||| |||||||||||||||||| ||||||||||||    
T  36486458 ggtcaaaattgacaaaaaggatcaaagttgcaaagggactaaatcttaggggaccaaaattgtagtttttgtacttagggg 36486538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 40 - 127
Target Start/End: Original strand, 16650818 - 16650905
Alignment:
Q  40 ttgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    |||||||| |||||||||||| ||||||||||||||||||| |||||||| ||||| || | ||||||||||||| | ||||||||||    
T  16650818 ttgacttgatcaaaattgaccaaaaggaccaaagatgcaaatgggctaaaccttagggggctaaaattgtagtttttatacttagggg 16650905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 49 - 127
Target Start/End: Complemental strand, 25523198 - 25523120
Alignment:
Q  49 tcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    |||||||||| | |||||| ||||||||||||||||||||||||||| ||  |||||||||||||| ||||||||||||    
T  25523198 tcaaaattgatcaaaaggatcaaagatgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggg 25523120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 48 - 125
Target Start/End: Original strand, 25524069 - 25524146
Alignment:
Q  48 gtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagg 125  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||| ||  ||||||| |||||| ||||||||||    
T  25524069 gtcaaaattgaccaaaaggactaaagatgcaaaggggctaaatcttagggggtcaaaattatagtttttgtacttagg 25524146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 47 - 124
Target Start/End: Original strand, 28539790 - 28539867
Alignment:
Q  47 ggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttag 124  Q
    ||||||||||| |  |||||| ||||| ||||||||| ||||||||||| |||||||||||||||||| |||||||||    
T  28539790 ggtcaaaattggcaaaaaggatcaaagttgcaaagggactaaatcttaggggaccaaaattgtagtttttgtacttag 28539867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 40 - 120
Target Start/End: Complemental strand, 2186908 - 2186828
Alignment:
Q  40 ttgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtac 120  Q
    ||||| ||||||||||||||| ||||||||||||||| |||  ||||||||||||| |||  ||||||||||||| |||||    
T  2186908 ttgacctggtcaaaattgaccaaaaggaccaaagatgtaaaatggctaaatcttaggggattaaaattgtagtttttgtac 2186828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 47 - 123
Target Start/End: Complemental strand, 28538807 - 28538731
Alignment:
Q  47 ggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtactta 123  Q
    |||||||||||||  |||||| ||||| ||||||||||||||||||||| || | ||||||||||||| ||||||||    
T  28538807 ggtcaaaattgacaaaaaggatcaaagttgcaaaggggctaaatcttagggggctaaaattgtagtttttgtactta 28538731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 48 - 123
Target Start/End: Original strand, 2686372 - 2686447
Alignment:
Q  48 gtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtactta 123  Q
    ||||||||||| | |||||||||||||||||| | ||||||||| ||| ||||||||||| |||||| ||||||||    
T  2686372 gtcaaaattgatcaaaaggaccaaagatgcaatgaggctaaatcataggggaccaaaattatagtttttgtactta 2686447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 48 - 127
Target Start/End: Original strand, 19754101 - 19754180
Alignment:
Q  48 gtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    ||||||||||  | |||||||||||||||||| ||||||||||| ||| || ||||||||||||||| |||| |||||||    
T  19754101 gtcaaaattgttcaaaaggaccaaagatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttagggg 19754180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 40 - 127
Target Start/End: Original strand, 22940586 - 22940672
Alignment:
Q  40 ttgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    ||||||||||||||||||||| ||||||  ||||||| ||||||||||||| |||| ||  |||||||||| ||| ||||||||||||    
T  22940586 ttgacttggtcaaaattgaccaaaaggataaaagatgaaaaggggctaaattttag-gggtcaaaattgtaatttttgtacttagggg 22940672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 476 - 570
Target Start/End: Complemental strand, 11255418 - 11255325
Alignment:
Q  476 gacagatactactcacactccaaaaaactcaagttacatcttggaatgaccaatatatcctttaactgaaataaaaatttcaaattaatcaaaaa 570  Q
    |||||||||| ||||||| ||||||||| ||||||||||    ||||||| |||||| | ||||||| |||||||||||||||||||||| ||||    
T  11255418 gacagatact-ctcacaccccaaaaaacacaagttacattccagaatgactaatataccttttaactaaaataaaaatttcaaattaatctaaaa 11255325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 478 - 570
Target Start/End: Original strand, 8781495 - 8781587
Alignment:
Q  478 cagatactactcacactccaaaaaactcaagttacatcttggaatgaccaatatatcctttaactgaaataaaaatttcaaattaatcaaaaa 570  Q
    ||||| |||||| ||||||||||||  ||||||||| | | || | || |||||| ||||||||| |||||||||||||||||||||| ||||    
T  8781495 cagatgctactcgcactccaaaaaatacaagttacaccctagattaactaatataccctttaactaaaataaaaatttcaaattaatctaaaa 8781587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 127
Target Start/End: Original strand, 5730806 - 5730912
Alignment:
Q  21 gtggcatgtccaatcagcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtac 120  Q
    |||||||| | ||||||| |||||| |||||||||||| | |||| ||||||| ||||| |||| |||||||||| ||  | ||||||| ||||  ||||    
T  5730806 gtggcatgccaaatcagcgttgactaggtcaaaattgatcaaaagaaccaaagttgcaatggggttaaatcttagggggactaaattgtggttttggtac 5730905  T
Q  121 ttagggg 127  Q
    |||||||    
T  5730906 ttagggg 5730912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 127
Target Start/End: Original strand, 5778792 - 5778886
Alignment:
Q  33 atcagcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    |||||| |||||| |||||||||||  | |||||||||||| ||||| ||||||||||||||| ||  | ||||||| ||||  |||||||||||    
T  5778792 atcagcgttgactaggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggg 5778886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 506 - 563
Target Start/End: Original strand, 10691346 - 10691403
Alignment:
Q  506 aagttacatcttggaatgaccaatatatcctttaactgaaataaaaatttcaaattaa 563  Q
    |||||||||||  ||||||| |||||| ||||||||| ||||||||||||||||||||    
T  10691346 aagttacatctcagaatgactaatataccctttaactaaaataaaaatttcaaattaa 10691403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 506 - 563
Target Start/End: Original strand, 15471987 - 15472044
Alignment:
Q  506 aagttacatcttggaatgaccaatatatcctttaactgaaataaaaatttcaaattaa 563  Q
    |||||||||| | ||||||  |||||||||||||||| ||||||||||||||||||||    
T  15471987 aagttacatcctagaatgattaatatatcctttaactaaaataaaaatttcaaattaa 15472044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 48 - 105
Target Start/End: Complemental strand, 18485275 - 18485218
Alignment:
Q  48 gtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaa 105  Q
    ||||||||| ||| |||||| ||||||||||||||||||||||||||| || ||||||    
T  18485275 gtcaaaattaaccaaaaggatcaaagatgcaaaggggctaaatcttagggggccaaaa 18485218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 123
Target Start/End: Complemental strand, 36485431 - 36485355
Alignment:
Q  47 ggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtactta 123  Q
    |||||||||||||  ||| || ||||| |||||||||| |||||||||| || |||||||| |||||| ||||||||    
T  36485431 ggtcaaaattgacaaaaatgatcaaagttgcaaaggggttaaatcttagggggccaaaattatagtttttgtactta 36485355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 114
Target Start/End: Original strand, 1797289 - 1797334
Alignment:
Q  69 caaagatgcaaaggggctaaatcttagaggaccaaaattgtagttt 114  Q
    ||||| ||||||||||||||||||||  ||||||||||||||||||    
T  1797289 caaagttgcaaaggggctaaatcttaagggaccaaaattgtagttt 1797334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 127
Target Start/End: Complemental strand, 21835156 - 21835091
Alignment:
Q  62 aaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    |||||| ||||| |||||||||| |||||||||| ||  |||||||||||||| ||||| ||||||    
T  21835156 aaaggatcaaagttgcaaaggggttaaatcttagggggtcaaaattgtagtttttgtacatagggg 21835091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 495 - 560
Target Start/End: Complemental strand, 25032111 - 25032046
Alignment:
Q  495 ccaaaaaactcaagttacatcttggaatgaccaatatatcctttaactgaaataaaaatttcaaat 560  Q
    ||||||||  ||||||||| ||  ||||||| |||||| ||||||||| |||||||||||||||||    
T  25032111 ccaaaaaaaacaagttacacctcagaatgactaatataccctttaactaaaataaaaatttcaaat 25032046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 519 - 563
Target Start/End: Original strand, 8835875 - 8835919
Alignment:
Q  519 gaatgaccaatatatcctttaactgaaataaaaatttcaaattaa 563  Q
    ||||||| |||||| ||||||||| ||||||||||||||||||||    
T  8835875 gaatgactaatataccctttaactaaaataaaaatttcaaattaa 8835919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 519 - 563
Target Start/End: Original strand, 31377571 - 31377615
Alignment:
Q  519 gaatgaccaatatatcctttaactgaaataaaaatttcaaattaa 563  Q
    ||||||| |||||| ||||||||| ||||||||||||||||||||    
T  31377571 gaatgactaatataccctttaactaaaataaaaatttcaaattaa 31377615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 522 - 570
Target Start/End: Original strand, 33569351 - 33569399
Alignment:
Q  522 tgaccaatatatcctttaactgaaataaaaatttcaaattaatcaaaaa 570  Q
    |||| |||||| ||||||||| |||||||||||||||||||||| ||||    
T  33569351 tgactaatataccctttaactaaaataaaaatttcaaattaatctaaaa 33569399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 505 - 563
Target Start/End: Complemental strand, 18618195 - 18618137
Alignment:
Q  505 caagttacatcttggaatgaccaatatatcctttaactgaaataaaaatttcaaattaa 563  Q
    ||||||||| | | ||||||| |||||| || |||||| ||||||||||||||||||||    
T  18618195 caagttacaccctagaatgactaatataccccttaactaaaataaaaatttcaaattaa 18618137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 127
Target Start/End: Complemental strand, 5778015 - 5777950
Alignment:
Q  62 aaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    |||||||||||| ||||| ||||||||||||||| ||  | ||||||| ||||  |||||||||||    
T  5778015 aaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggg 5777950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 519 - 560
Target Start/End: Complemental strand, 6231027 - 6230986
Alignment:
Q  519 gaatgaccaatatatcctttaactgaaataaaaatttcaaat 560  Q
    ||||||| |||||| ||||||||| |||||||||||||||||    
T  6231027 gaatgactaatataccctttaactaaaataaaaatttcaaat 6230986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 75; Significance: 4e-34; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 21 - 127
Target Start/End: Original strand, 61403 - 61509
Alignment:
Q  21 gtggcatgtccaatcagcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtac 120  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||| || |||||||| |||||| |||||    
T  61403 gtggcatgtccagtcagcattgacttggtcaaaattgaccaaaaggaccaaagatgcaaaagggctaaatcatagggggccaaaattatagtttttgtac 61502  T
Q  121 ttagggg 127  Q
    |||||||    
T  61503 ttagggg 61509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 20 - 127
Target Start/End: Complemental strand, 60248 - 60141
Alignment:
Q  20 cgtggcatgtccaatcagcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgta 119  Q
    |||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| ||| ||  |||||||||||||| | ||    
T  60248 cgtggcatgttcaatcagcattgacttggtcaaaattgaccaaaaagaccaaagatgcaaaggggctaaatcatagggggtcaaaattgtagtttttata 60149  T
Q  120 cttagggg 127  Q
    | ||||||    
T  60148 catagggg 60141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 4e-31; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 18299531 - 18299426
Alignment:
Q  20 cgtggcatgtccaatcagcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgta 119  Q
    |||| |||||||||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||| ||| || ||||||||||||||| | ||    
T  18299531 cgtgacatgtccaatcagcattgacttggtcaaaattgaccaaaaggatcaaagatgcaaaagggctaaatcatagggggccaaaattgtagtttttata 18299432  T
Q  120 cttagg 125  Q
    ||||||    
T  18299431 cttagg 18299426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 20 - 127
Target Start/End: Complemental strand, 24475382 - 24475275
Alignment:
Q  20 cgtggcatgtccaatcagcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgta 119  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||||||  ||| || ||||||||||||||| | ||    
T  24475382 cgtggaatgtccaatcagcattgacttggtcaaaattgaccaaaaggaccaaagatgcaaatgagctaaattatagggggccaaaattgtagtttttata 24475283  T
Q  120 cttagggg 127  Q
    ||||||||    
T  24475282 cttagggg 24475275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 21 - 127
Target Start/End: Original strand, 18300669 - 18300774
Alignment:
Q  21 gtggcatgtccaatcagcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtac 120  Q
    ||||||||||||||||||||||||||| ||||||||| || |||||||||||||||||||||||||||||  ||| ||  |||||||||||||| |||||    
T  18300669 gtggcatgtccaatcagcattgacttgatcaaaattgtccaaaaggaccaaagatgcaaaggggctaaattatag-gggtcaaaattgtagtttttgtac 18300767  T
Q  121 ttagggg 127  Q
    |||||||    
T  18300768 ttagggg 18300774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 11996867 - 11996758
Alignment:
Q  18 cacgtggcatgtccaatcagcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatg 117  Q
    |||||||| || | ||||||| ||||||||||||||||||||| ||||||||||||||| ||||||| |||||||||||| || ||||||||||||| ||    
T  11996867 cacgtggcttgccaaatcagcgttgacttggtcaaaattgaccaaaaggaccaaagatgtaaaggggttaaatcttagagaactaaaattgtagtttttg 11996768  T
Q  118 tacttagggg 127  Q
    ||| ||||||    
T  11996767 tacatagggg 11996758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 40 - 127
Target Start/End: Original strand, 11258774 - 11258861
Alignment:
Q  40 ttgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    |||||| |||||||||||||| |||||| ||||  ||||| ||||||||||||||| |||| ||||||||||||| ||||||||||||    
T  11258774 ttgactaggtcaaaattgaccaaaaggatcaaatctgcaatggggctaaatcttaggggactaaaattgtagtttttgtacttagggg 11258861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 37 - 119
Target Start/End: Complemental strand, 22587640 - 22587559
Alignment:
Q  37 gcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgta 119  Q
    ||||||||| ||||||||||| || |||||||||||||||||||| ||||||||||||| || ||||||||||||||| ||||    
T  22587640 gcattgact-ggtcaaaattggccaaaaggaccaaagatgcaaagaggctaaatcttagggggccaaaattgtagtttttgta 22587559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 46 - 127
Target Start/End: Original strand, 22587923 - 22588004
Alignment:
Q  46 tggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    ||||| |||||| || |||||||||||||||||||||||||||||||||  || ||||||||||||||| ||||| ||||||    
T  22587923 tggtcgaaattggccaaaaggaccaaagatgcaaaggggctaaatcttaaggggccaaaattgtagtttttgtacatagggg 22588004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 48 - 128
Target Start/End: Complemental strand, 22848321 - 22848241
Alignment:
Q  48 gtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggga 128  Q
    ||||||||||| | |||||||||||| ||||||||||||||||||||| |  ||||||||||||||| |||| ||||||||    
T  22848321 gtcaaaattgatcaaaaggaccaaagctgcaaaggggctaaatcttagggagccaaaattgtagtttttgtatttagggga 22848241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 802563 - 802634
Alignment:
Q  49 tcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtac 120  Q
    |||||||||||||||||||||||| |||||||||||  ||||||||||||  |||||||||||||| |||||    
T  802563 tcaaaattgacctaaaggaccaaatatgcaaaggggtaaaatcttagagggtcaaaattgtagtttttgtac 802634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 20 - 123
Target Start/End: Complemental strand, 18904524 - 18904422
Alignment:
Q  20 cgtggcatgtccaatcagcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgta 119  Q
    ||||||||| ||| ||||| ||||||  || ||||||| || ||||||||||||||| ||||||||||| |||||| | |||||||||||||||| ||||    
T  18904524 cgtggcatg-ccactcagctttgactaagttaaaattggccaaaaggaccaaagatgtaaaggggctaattcttagggaaccaaaattgtagtttttgta 18904426  T
Q  120 ctta 123  Q
    ||||    
T  18904425 ctta 18904422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 40 - 125
Target Start/End: Complemental strand, 26544286 - 26544201
Alignment:
Q  40 ttgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagg 125  Q
    ||||||||||||||||||| | ||||||||||| ||||||||| ||||||||||||  | | |||| |||||||| ||||||||||    
T  26544286 ttgacttggtcaaaattgatcaaaaggaccaaatatgcaaaggtgctaaatcttaggaggctaaaactgtagtttttgtacttagg 26544201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 810753 - 810824
Alignment:
Q  49 tcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtac 120  Q
    |||||||||| ||||||||||||| |||||||||||  ||||||||||||  |||||||||||||| |||||    
T  810753 tcaaaattgatctaaaggaccaaatatgcaaaggggtaaaatcttagagggtcaaaattgtagtttttgtac 810824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 48 - 127
Target Start/End: Complemental strand, 13030419 - 13030340
Alignment:
Q  48 gtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    ||||||||||||| ||| ||||||||||||||| | |||||||||||| || | ||||||||| ||| ||||||||||||    
T  13030419 gtcaaaattgaccaaaatgaccaaagatgcaaaagagctaaatcttagggggcaaaaattgtaatttttgtacttagggg 13030340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 40 - 107
Target Start/End: Original strand, 26545484 - 26545551
Alignment:
Q  40 ttgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaatt 107  Q
    |||| |||||||||||||| | ||| |||||||||||||||||||||||||||||||||  |||||||    
T  26545484 ttgatttggtcaaaattgatcaaaatgaccaaagatgcaaaggggctaaatcttagagggtcaaaatt 26545551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 18 - 114
Target Start/End: Complemental strand, 18797407 - 18797311
Alignment:
Q  18 cacgtggcatgtccaatcagcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagttt 114  Q
    ||||||||||| | ||| ||| |||||   |||||||||| |  ||||||||||||||||||||||||||||| |||| ||  ||||||||||||||    
T  18797407 cacgtggcatgccaaataagcgttgaccaagtcaaaattggctaaaaggaccaaagatgcaaaggggctaaattttagggggtcaaaattgtagttt 18797311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 48 - 127
Target Start/End: Original strand, 18905959 - 18906037
Alignment:
Q  48 gtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    ||||||||||| | ||| ||||||||||||||| | |||||||||||| || | ||||||||||||| ||||||||||||    
T  18905959 gtcaaaattgatcaaaaagaccaaagatgcaaatgagctaaatcttag-gggctaaaattgtagtttttgtacttagggg 18906037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 127
Target Start/End: Original strand, 23869511 - 23869585
Alignment:
Q  53 aattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    |||||| | |||||| ||||||||||||||||||||||||||| |  | ||||||||||||| |||| |||||||    
T  23869511 aattgaacaaaaggatcaaagatgcaaaggggctaaatcttagggagctaaaattgtagtttttgtatttagggg 23869585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 127
Target Start/End: Complemental strand, 28618062 - 28617973
Alignment:
Q  37 gcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    ||||||| || |||||||| |||| |||  ||||||||||||||||||||||||||||| ||  |||||||| ||||| ||||||| ||||    
T  28618062 gcattgaattagtcaaaatagaccaaaataaccaaagatgcaaaggggctaaatcttag-ggggcaaaattgaagtttttgtacttggggg 28617973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 506 - 563
Target Start/End: Original strand, 1221748 - 1221805
Alignment:
Q  506 aagttacatcttggaatgaccaatatatcctttaactgaaataaaaatttcaaattaa 563  Q
    |||||||| ||| ||||||| |||||| ||||||||| ||||||||||||||||||||    
T  1221748 aagttacaccttagaatgactaatataccctttaactaaaataaaaatttcaaattaa 1221805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 36 - 125
Target Start/End: Complemental strand, 7898832 - 7898744
Alignment:
Q  36 agcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagg 125  Q
    |||||||||| |||||||||||| | ||||||  |||  ||||| ||||||||||||||| || ||||||||||||||| | ||||||||    
T  7898832 agcattgact-ggtcaaaattgatcaaaaggattaaaattgcaatggggctaaatcttagggggccaaaattgtagtttctatacttagg 7898744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 7899852 - 7899933
Alignment:
Q  47 ggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggga 128  Q
    |||||||||||||| ||| ||  |||| | ||| ||||||||||||||| || | ||||||||||||| |||||||||||||    
T  7899852 ggtcaaaattgaccaaaaagattaaagttacaatggggctaaatcttagggggctaaaattgtagtttctgtacttagggga 7899933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 48 - 124
Target Start/End: Original strand, 18869133 - 18869210
Alignment:
Q  48 gtcaaaattgacctaaaggaccaaagatgcaaag-gggctaaatcttagaggaccaaaattgtagtttatgtacttag 124  Q
    ||||||||||| | ||| |||||||||||||||  |||||||||||||| |||  ||||||||||||| |||||||||    
T  18869133 gtcaaaattgatcaaaaagaccaaagatgcaaaatgggctaaatcttaggggataaaaattgtagtttttgtacttag 18869210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 24476802 - 24476866
Alignment:
Q  20 cgtggcatgtccaatcagcattgacttggtcaaaattgacctaaaggaccaaagatgcaaagggg 84  Q
    ||||||||||| ||||||||||||||||||||||||||| | |||| | |||| || ||||||||    
T  24476802 cgtggcatgtctaatcagcattgacttggtcaaaattgatcaaaagaatcaaaaatacaaagggg 24476866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 495 - 563
Target Start/End: Original strand, 31546610 - 31546678
Alignment:
Q  495 ccaaaaaactcaagttacatcttggaatgaccaatatatcctttaactgaaataaaaatttcaaattaa 563  Q
    ||||||||  |||||||||||   ||||||| |||||| ||||||||| ||||||||||||||||||||    
T  31546610 ccaaaaaaaacaagttacatcccagaatgactaatataccctttaactaaaataaaaatttcaaattaa 31546678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 127
Target Start/End: Complemental strand, 38839373 - 38839293
Alignment:
Q  47 ggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    |||||||||||||| ||| ||  |||  ||||| ||||||||||||||| || ||||||||||||||| |||| |||||||    
T  38839373 ggtcaaaattgaccaaaatgattaaaattgcaatggggctaaatcttagggggccaaaattgtagtttttgtagttagggg 38839293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 127
Target Start/End: Original strand, 38840463 - 38840543
Alignment:
Q  47 ggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    |||||||||||| | ||||||  |||  ||||| ||||||||||||||| || | ||||||||||||| ||||||||||||    
T  38840463 ggtcaaaattgatcaaaaggattaaaattgcaatggggctaaatcttagggggctaaaattgtagtttttgtacttagggg 38840543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 127
Target Start/End: Complemental strand, 41878225 - 41878145
Alignment:
Q  47 ggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    |||||||||||||| ||| ||  |||  ||||| ||||||||||||||  || ||||||||||||||| ||||||||||||    
T  41878225 ggtcaaaattgaccaaaaagattaaaattgcaatggggctaaatcttaaggggccaaaattgtagtttctgtacttagggg 41878145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 488 - 563
Target Start/End: Original strand, 26479096 - 26479171
Alignment:
Q  488 tcacactccaaaaaactcaagttacatcttggaatgaccaatatatcctttaactgaaataaaaatttcaaattaa 563  Q
    |||||| ||||||||  ||||||||| |   ||||||| |||||| ||||||||| ||||||||||||||||||||    
T  26479096 tcacaccccaaaaaaaacaagttacaccccagaatgactaatataccctttaactaaaataaaaatttcaaattaa 26479171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 126
Target Start/End: Complemental strand, 11257751 - 11257673
Alignment:
Q  48 gtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttaggg 126  Q
    ||||||||||| | |||||| ||||  ||||| |||||||||||||||  | ||||||||||||||| | |||||||||    
T  11257751 gtcaaaattgatcaaaaggatcaaatttgcaatggggctaaatcttaggaggccaaaattgtagtttttatacttaggg 11257673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 519 - 563
Target Start/End: Complemental strand, 2358120 - 2358076
Alignment:
Q  519 gaatgaccaatatatcctttaactgaaataaaaatttcaaattaa 563  Q
    ||||||| |||||| ||||||||| ||||||||||||||||||||    
T  2358120 gaatgactaatataccctttaactaaaataaaaatttcaaattaa 2358076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 48 - 128
Target Start/End: Original strand, 36450892 - 36450972
Alignment:
Q  48 gtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggga 128  Q
    |||||||||| || |||||| ||||  |||||||| ||||| |||| | || || |||||||||||| |||||||||||||    
T  36450892 gtcaaaattggccaaaaggatcaaaattgcaaaggagctaattcttggggggccgaaattgtagtttctgtacttagggga 36450972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 123
Target Start/End: Original strand, 8535627 - 8535702
Alignment:
Q  48 gtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtactta 123  Q
    ||||||||||||||||||||| |    |||||||||||||| |||||| ||  |||||||||||||| | ||||||    
T  8535627 gtcaaaattgacctaaaggactactattgcaaaggggctaattcttagggggtcaaaattgtagtttctctactta 8535702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 488 - 563
Target Start/End: Original strand, 21866523 - 21866598
Alignment:
Q  488 tcacactccaaaaaactcaagttacatcttggaatgaccaatatatcctttaactgaaataaaaatttcaaattaa 563  Q
    |||||| ||||||||  |||||||||  |  ||||||| |||||| ||||||||| |||||||||||| |||||||    
T  21866523 tcacaccccaaaaaaaacaagttacacttcagaatgactaatataccctttaactaaaataaaaattttaaattaa 21866598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 48 - 90
Target Start/End: Complemental strand, 21837169 - 21837127
Alignment:
Q  48 gtcaaaattgacctaaaggaccaaagatgcaaaggggctaaat 90  Q
    ||||||||||| | ||| |||||||||||||||||||||||||    
T  21837169 gtcaaaattgatcaaaatgaccaaagatgcaaaggggctaaat 21837127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 519 - 560
Target Start/End: Original strand, 2371436 - 2371477
Alignment:
Q  519 gaatgaccaatatatcctttaactgaaataaaaatttcaaat 560  Q
    ||||||| |||||| ||||||||| |||||||||||||||||    
T  2371436 gaatgactaatataccctttaactaaaataaaaatttcaaat 2371477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 519 - 560
Target Start/End: Original strand, 30786643 - 30786684
Alignment:
Q  519 gaatgaccaatatatcctttaactgaaataaaaatttcaaat 560  Q
    ||||||| |||||| ||||||||| |||||||||||||||||    
T  30786643 gaatgactaatataccctttaactaaaataaaaatttcaaat 30786684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 519 - 564
Target Start/End: Original strand, 39429270 - 39429315
Alignment:
Q  519 gaatgaccaatatatcctttaactgaaataaaaatttcaaattaat 564  Q
    ||||||| |||||| ||||||| | |||||||||||||||||||||    
T  39429270 gaatgactaatataccctttaattaaaataaaaatttcaaattaat 39429315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 6e-30; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 18 - 109
Target Start/End: Original strand, 35595133 - 35595223
Alignment:
Q  18 cacgtggcatgtccaatcagcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgt 109  Q
    ||||||||||| | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||    
T  35595133 cacgtggcatgccaaatcagcattgacttggtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaatcttag-gggccaaaattgt 35595223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 32 - 127
Target Start/End: Complemental strand, 51684512 - 51684417
Alignment:
Q  32 aatcagcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    ||||||| |||||||||||||||||| || |||||||||||||||||||||||||||||||||| || ||||||||||||||| | ||| ||||||    
T  51684512 aatcagcgttgacttggtcaaaattggccaaaaggaccaaagatgcaaaggggctaaatcttagggggccaaaattgtagtttttatacatagggg 51684417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 39153077 - 39153159
Alignment:
Q  37 gcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtac 120  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||  |||||||||||||| |||||    
T  39153077 gcattgact-ggtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttagagggtcaaaattgtagtttttgtac 39153159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 48 - 127
Target Start/End: Complemental strand, 43058915 - 43058836
Alignment:
Q  48 gtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    ||||||||||||| |||||| |||||||| ||||||||||||||||||||| | ||||||||||||| ||||||||||||    
T  43058915 gtcaaaattgaccaaaaggatcaaagatgtaaaggggctaaatcttagagggctaaaattgtagtttttgtacttagggg 43058836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 37 - 127
Target Start/End: Original strand, 45157170 - 45157259
Alignment:
Q  37 gcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||| |||  |||||||||||||| ||||| ||||||    
T  45157170 gcattgact-ggtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttaaagggtcaaaattgtagtttttgtacatagggg 45157259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 37 - 127
Target Start/End: Complemental strand, 39152071 - 39151982
Alignment:
Q  37 gcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||| ||   |||||||||||||| ||||| ||||||    
T  39152071 gcattgact-ggtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttaaagagtcaaaattgtagtttttgtacatagggg 39151982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 40 - 128
Target Start/End: Original strand, 11437162 - 11437250
Alignment:
Q  40 ttgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggga 128  Q
    |||||| |||||||||||||| |||||| |||||||| ||| ||| |||||||||| || ||||||||||||||| |||||||| ||||    
T  11437162 ttgactcggtcaaaattgaccaaaaggatcaaagatgtaaaagggttaaatcttagggggccaaaattgtagtttttgtacttaaggga 11437250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 47 - 127
Target Start/End: Original strand, 39699737 - 39699817
Alignment:
Q  47 ggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    |||||||||||||| ||||||  |||| ||||| ||||||||||||||| || ||||||||||||||| ||||||||||||    
T  39699737 ggtcaaaattgaccaaaaggattaaagttgcaatggggctaaatcttagggggccaaaattgtagtttctgtacttagggg 39699817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 40 - 120
Target Start/End: Original strand, 51685728 - 51685808
Alignment:
Q  40 ttgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtac 120  Q
    |||| ||||| ||||||| || |||||||||||||||||||||||||||||||||| ||  |||||||||||||| |||||    
T  51685728 ttgaattggttaaaattggccaaaaggaccaaagatgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtac 51685808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 40 - 123
Target Start/End: Complemental strand, 11436180 - 11436097
Alignment:
Q  40 ttgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtactta 123  Q
    |||||| |||||||||||||| |||| |||||||||||||| ||| |||||||||| || ||||||||||||||| | ||||||    
T  11436180 ttgactcggtcaaaattgaccaaaagaaccaaagatgcaaatgggttaaatcttagggggccaaaattgtagtttttatactta 11436097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 48 - 127
Target Start/End: Complemental strand, 24422930 - 24422851
Alignment:
Q  48 gtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    ||||||||||||| |||||| ||||  ||||| ||||||||||||||| || ||||||||||||||| ||||||||||||    
T  24422930 gtcaaaattgaccaaaaggatcaaatttgcaatggggctaaatcttagggggccaaaattgtagtttttgtacttagggg 24422851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 40 - 127
Target Start/End: Original strand, 24426038 - 24426125
Alignment:
Q  40 ttgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    |||||| |||||||||||||| |||| | ||||  ||||| ||||||||||||||| |||| ||||||||||||| ||||||||||||    
T  24426038 ttgactaggtcaaaattgaccaaaagtatcaaatttgcaatggggctaaatcttaggggactaaaattgtagtttttgtacttagggg 24426125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 48 - 127
Target Start/End: Complemental strand, 50680461 - 50680382
Alignment:
Q  48 gtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    ||||||||||||| |||||| |||||||||||||||| |||||||||| |||| |||||| |||||| | ||||||||||    
T  50680461 gtcaaaattgaccaaaaggatcaaagatgcaaaggggttaaatcttaggggactaaaattatagtttttatacttagggg 50680382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 47 - 125
Target Start/End: Complemental strand, 40384856 - 40384778
Alignment:
Q  47 ggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagg 125  Q
    ||||||||||| || |||||||||||||||||||| |||||||| |||| ||| |||||||||||||| ||||| ||||    
T  40384856 ggtcaaaattggccaaaaggaccaaagatgcaaagaggctaaattttaggggatcaaaattgtagtttttgtacatagg 40384778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 40 - 128
Target Start/End: Original strand, 43378676 - 43378764
Alignment:
Q  40 ttgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggga 128  Q
    |||||||||||||||| |||| ||||||  ||||||||||||| ||||||||||||  |  |||||||||| ||| |||||||||||||    
T  43378676 ttgacttggtcaaaatcgaccaaaaggattaaagatgcaaaggtgctaaatcttaggtggtcaaaattgtaatttttgtacttagggga 43378764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 47 - 127
Target Start/End: Complemental strand, 44404573 - 44404493
Alignment:
Q  47 ggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    |||||||||||||| ||| |||||||||||||||  |||||||| |||| || |||||||| |||||| ||||||||||||    
T  44404573 ggtcaaaattgaccaaaatgaccaaagatgcaaattggctaaattttagggggccaaaattatagtttttgtacttagggg 44404493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 47 - 127
Target Start/End: Complemental strand, 45148711 - 45148632
Alignment:
Q  47 ggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    ||||||||||| || ||||||||||||||||||||||| |||||||||| ||  |||||||||||||| | ||||||||||    
T  45148711 ggtcaaaattggccaaaaggaccaaagatgcaaaggggttaaatcttaggggggcaaaattgtagttt-tttacttagggg 45148632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 48 - 127
Target Start/End: Original strand, 36613875 - 36613954
Alignment:
Q  48 gtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    ||||||||||| | ||||||| |||| ||||||| ||||||||||||| ||  |||||||||||||| ||||||||||||    
T  36613875 gtcaaaattgatcaaaaggactaaagttgcaaagaggctaaatcttagggggtcaaaattgtagtttttgtacttagggg 36613954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 48 - 123
Target Start/End: Original strand, 43059977 - 43060052
Alignment:
Q  48 gtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtactta 123  Q
    ||||||||||||| ||||||||||||||||||| | |||||||||||  ||  |||||||||||||| ||||||||    
T  43059977 gtcaaaattgaccaaaaggaccaaagatgcaaatgagctaaatcttaaggggtcaaaattgtagtttttgtactta 43060052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 48 - 127
Target Start/End: Complemental strand, 52275098 - 52275019
Alignment:
Q  48 gtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    ||||||||||||| |||||| ||||  ||||| | ||||||||||||| || ||||||||||||||| ||||||||||||    
T  52275098 gtcaaaattgaccaaaaggatcaaatttgcaatgaggctaaatcttaggggcccaaaattgtagtttttgtacttagggg 52275019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 126
Target Start/End: Original strand, 52828014 - 52828119
Alignment:
Q  21 gtggcatgtccaatcagcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtac 120  Q
    |||||||| | ||||||| |||||| |||||||||||  | |||||||||||| ||||| ||||||||||||||| ||  | ||||||| ||||  ||||    
T  52828014 gtggcatgccaaatcagcgttgactaggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtac 52828113  T
Q  121 ttaggg 126  Q
    ||||||    
T  52828114 ttaggg 52828119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 66 - 126
Target Start/End: Original strand, 23980455 - 23980515
Alignment:
Q  66 gaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttaggg 126  Q
    ||||||| ||||||||||||||||||||||  |||||||||| |||||| |||||||||||    
T  23980455 gaccaaaaatgcaaaggggctaaatcttaggagaccaaaattatagtttttgtacttaggg 23980515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 51 - 123
Target Start/End: Complemental strand, 36612979 - 36612907
Alignment:
Q  51 aaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtactta 123  Q
    |||||||||| ||| |||||||||||||||||| ||||||||||| ||   ||||||||||||| ||||||||    
T  36612979 aaaattgaccaaaatgaccaaagatgcaaagggactaaatcttagggggttaaaattgtagtttttgtactta 36612907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 48 - 127
Target Start/End: Original strand, 39222444 - 39222523
Alignment:
Q  48 gtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    |||||||||| || ||| ||||||||||||||| |||| |||||||||||| | || |||||||||| | ||||||||||    
T  39222444 gtcaaaattgcccaaaaagaccaaagatgcaaatgggcaaaatcttagagggctaacattgtagtttttatacttagggg 39222523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 127
Target Start/End: Original strand, 52276126 - 52276213
Alignment:
Q  40 ttgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    |||||| |||||||||||| | |||||| ||||  ||||| ||||||||||||||| |||| ||| || |||||| ||||||||||||    
T  52276126 ttgactaggtcaaaattgatcaaaaggatcaaatttgcaatggggctaaatcttaggggactaaatttatagtttttgtacttagggg 52276213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 114
Target Start/End: Original strand, 37526849 - 37526914
Alignment:
Q  48 gtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagttt 114  Q
    ||||||||||| | ||| |||||||||||||||||||||||||||||| || |||||||||| ||||    
T  37526849 gtcaaaattgatcaaaaagaccaaagatgcaaaggggctaaatcttag-gggccaaaattgtggttt 37526914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 90
Target Start/End: Complemental strand, 39221444 - 39221402
Alignment:
Q  48 gtcaaaattgacctaaaggaccaaagatgcaaaggggctaaat 90  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  39221444 gtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaat 39221402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 95
Target Start/End: Complemental strand, 41364985 - 41364911
Alignment:
Q  21 gtggcatgtccaatcagcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttag 95  Q
    |||||||| | ||||||| |||||| |||||||||||| | ||| |||||||| ||||| |||||||||||||||    
T  41364985 gtggcatgccaaatcagcgttgactaggtcaaaattgatcaaaatgaccaaagttgcaatggggctaaatcttag 41364911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 120
Target Start/End: Complemental strand, 45156181 - 45156107
Alignment:
Q  46 tggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtac 120  Q
    ||||||||||||||| ||| |||||||||| ||||| || |||||||||||||   ||||||||||||| |||||    
T  45156181 tggtcaaaattgaccaaaaagaccaaagatacaaagaggttaaatcttagagggttaaaattgtagtttttgtac 45156107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 488 - 570
Target Start/End: Complemental strand, 49740683 - 49740601
Alignment:
Q  488 tcacactccaaaaaactcaagttacatcttggaatgaccaatatatcctttaactgaaataaaaatttcaaattaatcaaaaa 570  Q
    |||||| ||||||||| ||||||||| |   || |||| |||||| ||||||||| |||||||||||||||||||||| ||||    
T  49740683 tcacaccccaaaaaacacaagttacaccccagactgactaatataccctttaactaaaataaaaatttcaaattaatctaaaa 49740601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 95
Target Start/End: Complemental strand, 52827504 - 52827430
Alignment:
Q  21 gtggcatgtccaatcagcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttag 95  Q
    |||||||| | |||| || ||||||||||||||||||  | |||||||||||| ||||| |||||||||||||||    
T  52827504 gtggcatgccaaatcggcgttgacttggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttag 52827430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 35594375 - 35594267
Alignment:
Q  18 cacgtggcatgtccaatcagcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatg 117  Q
    ||||||||||| | ||| ||| |||||   |||||||||| |  ||||||||||||||||||||||||||||| |||| ||  ||||||||||||||       
T  35594375 cacgtggcatgccaaataagcgttgaccaagtcaaaattggctaaaaggaccaaagatgcaaaggggctaaattttag-gggtcaaaattgtagttttaa 35594277  T
Q  118 tacttagggg 127  Q
    ||||||||||    
T  35594276 tacttagggg 35594267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 44411936 - 44412017
Alignment:
Q  47 ggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggga 128  Q
    ||||||||||| |  |||||| ||||| ||||||||| |||||||||| |||   ||||||||||||| |||||||||||||    
T  44411936 ggtcaaaattggcaaaaaggatcaaagttgcaaagggcctaaatcttaaaggggtaaaattgtagtttttgtacttagggga 44412017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 47 - 123
Target Start/End: Original strand, 45149940 - 45150017
Alignment:
Q  47 ggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatctta-gaggaccaaaattgtagtttatgtactta 123  Q
    ||||||||||| || |||||| |||||||||||||||||||||||||| | ||  ||||||||| |||| ||||||||    
T  45149940 ggtcaaaattggccaaaaggatcaaagatgcaaaggggctaaatcttagggggggcaaaattgttgtttttgtactta 45150017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 478 - 570
Target Start/End: Original strand, 17924993 - 17925085
Alignment:
Q  478 cagatactactcacactccaaaaaactcaagttacatcttggaatgaccaatatatcctttaactgaaataaaaatttcaaattaatcaaaaa 570  Q
    ||||| |||||||||| ||||||||  ||||||||| |   || |||| |||||| ||||||||| |||||||||||| ||||||||| ||||    
T  17924993 cagatgctactcacaccccaaaaaatacaagttacaccccagattgactaatataccctttaactaaaataaaaattttaaattaatctaaaa 17925085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 128
Target Start/End: Complemental strand, 25652844 - 25652764
Alignment:
Q  48 gtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggga 128  Q
    |||||||||| || ||| ||||||||||||||| |||||||||||||| || ||||| || || ||| |||||||| ||||    
T  25652844 gtcaaaattggccaaaatgaccaaagatgcaaatgggctaaatcttagcgggccaaatttataatttttgtacttaaggga 25652764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 127
Target Start/End: Complemental strand, 39698693 - 39698614
Alignment:
Q  47 ggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    |||||||||||||| ||||||  |||| ||||| | ||||||||||||| || |||||||| |||||| ||||||||||||    
T  39698693 ggtcaaaattgaccaaaaggattaaagttgcaacgaggctaaatcttagtgg-ccaaaattatagtttctgtacttagggg 39698614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 476 - 579
Target Start/End: Complemental strand, 18606030 - 18605927
Alignment:
Q  476 gacagatactactcacactccaaaaaactcaagttacatcttggaatgaccaatatatcctttaactgaaataaaaatttcaaattaatcaaaaactttt 575  Q
    |||| |||||||||||||  |||||||| |||||| || |    |||||| |||||| |||| |||| |||||||||||||||||||||| |||| | ||    
T  18606030 gacacatactactcacaccgcaaaaaacacaagttgcaccccataatgactaatatacccttgaactaaaataaaaatttcaaattaatctaaaattctt 18605931  T
Q  576 tcat 579  Q
    ||||    
T  18605930 tcat 18605927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 488 - 563
Target Start/End: Original strand, 28225563 - 28225638
Alignment:
Q  488 tcacactccaaaaaactcaagttacatcttggaatgaccaatatatcctttaactgaaataaaaatttcaaattaa 563  Q
    ||||||||||||||   ||||||||| | | ||||||| |||||||||||||| | |||||||||||| |||||||    
T  28225563 tcacactccaaaaataacaagttacaccctagaatgactaatatatcctttaattaaaataaaaattttaaattaa 28225638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 488 - 563
Target Start/End: Complemental strand, 49457601 - 49457526
Alignment:
Q  488 tcacactccaaaaaactcaagttacatcttggaatgaccaatatatcctttaactgaaataaaaatttcaaattaa 563  Q
    |||||| ||||||||  |||||| ||||   ||||||| |||||| ||||||||| ||||||||||||||||||||    
T  49457601 tcacaccccaaaaaaaacaagttgcatcccagaatgactaatataccctttaactaaaataaaaatttcaaattaa 49457526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 505 - 563
Target Start/End: Complemental strand, 8896306 - 8896248
Alignment:
Q  505 caagttacatcttggaatgaccaatatatcctttaactgaaataaaaatttcaaattaa 563  Q
    ||||||||| ||  ||||||| |||||| ||||||||| ||||||||||||||||||||    
T  8896306 caagttacacctcagaatgactaatataccctttaactaaaataaaaatttcaaattaa 8896248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 120
Target Start/End: Complemental strand, 31194169 - 31194111
Alignment:
Q  62 aaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtac 120  Q
    |||||||||||||||||||  |||||||||||| ||| |||||||| |||||| |||||    
T  31194169 aaaggaccaaagatgcaaaaaggctaaatcttaaagggccaaaattttagtttttgtac 31194111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 505 - 563
Target Start/End: Original strand, 37093235 - 37093293
Alignment:
Q  505 caagttacatcttggaatgaccaatatatcctttaactgaaataaaaatttcaaattaa 563  Q
    ||||||||||| | ||||||| |||||| ||||||||| |||||||||||| |||||||    
T  37093235 caagttacatcctagaatgactaatataccctttaactaaaataaaaattttaaattaa 37093293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 46525742 - 46525827
Alignment:
Q  18 cacgtggcatgtccaatcagcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaa 104  Q
    ||||||||||| | ||| ||| ||||||||||||||||||||| ||| || || |  ||||||||||||||||||||| || |||||    
T  46525742 cacgtggcatgccaaataagcgttgacttggtcaaaattgacc-aaaagatcacaattgcaaaggggctaaatcttagggggccaaa 46525827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 519 - 560
Target Start/End: Original strand, 11335087 - 11335128
Alignment:
Q  519 gaatgaccaatatatcctttaactgaaataaaaatttcaaat 560  Q
    ||||||| |||||||||||||||| |||||||||||||||||    
T  11335087 gaatgactaatatatcctttaactaaaataaaaatttcaaat 11335128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 519 - 560
Target Start/End: Original strand, 11493107 - 11493148
Alignment:
Q  519 gaatgaccaatatatcctttaactgaaataaaaatttcaaat 560  Q
    ||||||| |||||||||||||||| |||||||||||||||||    
T  11493107 gaatgactaatatatcctttaactaaaataaaaatttcaaat 11493148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 123
Target Start/End: Original strand, 33088602 - 33088663
Alignment:
Q  62 aaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtactta 123  Q
    |||| ||||||| ||||||||||||||||||||| |   |||||||||||||| ||||||||    
T  33088602 aaagaaccaaagttgcaaaggggctaaatcttagggaggcaaaattgtagtttttgtactta 33088663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 519 - 564
Target Start/End: Original strand, 48541945 - 48541990
Alignment:
Q  519 gaatgaccaatatatcctttaactgaaataaaaatttcaaattaat 564  Q
    ||||||| |||||| ||||||||| |||||||||||||||||||||    
T  48541945 gaatgactaatataccctttaactaaaataaaaatttcaaattaat 48541990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 495 - 563
Target Start/End: Complemental strand, 3771311 - 3771243
Alignment:
Q  495 ccaaaaaactcaagttacatcttggaatgaccaatatatcctttaactgaaataaaaatttcaaattaa 563  Q
    ||||||||  ||||||||| | | ||||| | |||||||||||||||| ||||| ||||||||||||||    
T  3771311 ccaaaaaaaacaagttacaccctagaatggctaatatatcctttaactaaaatagaaatttcaaattaa 3771243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 519 - 563
Target Start/End: Original strand, 15475323 - 15475367
Alignment:
Q  519 gaatgaccaatatatcctttaactgaaataaaaatttcaaattaa 563  Q
    ||||||| |||||| ||||||||| ||||||||||||||||||||    
T  15475323 gaatgactaatataccctttaactaaaataaaaatttcaaattaa 15475367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 519 - 563
Target Start/End: Complemental strand, 15910455 - 15910411
Alignment:
Q  519 gaatgaccaatatatcctttaactgaaataaaaatttcaaattaa 563  Q
    ||||||| |||||| ||||||||| ||||||||||||||||||||    
T  15910455 gaatgactaatataccctttaactaaaataaaaatttcaaattaa 15910411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 127
Target Start/End: Original strand, 35066973 - 35067052
Alignment:
Q  48 gtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    ||||||||||||| ||||||| |    |||||||||||||||| |||| || ||||||||||||||| ||| | ||||||    
T  35066973 gtcaaaattgaccaaaaggactattattgcaaaggggctaaatattagggggccaaaattgtagtttttgttcatagggg 35067052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 95
Target Start/End: Original strand, 41366086 - 41366149
Alignment:
Q  32 aatcagcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttag 95  Q
    ||||||| |||||| |||||||| ||  | |||||||||||| ||||| |||||||||||||||    
T  41366086 aatcagcgttgactaggtcaaaagtggtcaaaaggaccaaagttgcaatggggctaaatcttag 41366149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 505 - 563
Target Start/End: Complemental strand, 3047599 - 3047541
Alignment:
Q  505 caagttacatcttggaatgaccaatatatcctttaactgaaataaaaatttcaaattaa 563  Q
    |||||||||||   ||||||| |||||| ||||||||| |||||||||||| |||||||    
T  3047599 caagttacatcccagaatgactaatataccctttaactaaaataaaaatttaaaattaa 3047541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 34 - 72
Target Start/End: Complemental strand, 13574960 - 13574922
Alignment:
Q  34 tcagcattgacttggtcaaaattgacctaaaggaccaaa 72  Q
    |||||||||||||||||||||||||||||  ||||||||    
T  13574960 tcagcattgacttggtcaaaattgacctaggggaccaaa 13574922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 47 - 127
Target Start/End: Complemental strand, 14999412 - 14999335
Alignment:
Q  47 ggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    |||||||||||||  |||||| ||||| |||| | | |||||||   |||||| |||||||||||||| ||||||||||||    
T  14999412 ggtcaaaattgacaaaaaggatcaaagttgcagatgagctaaat---agaggatcaaaattgtagtttttgtacttagggg 14999335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 46524698 - 46524613
Alignment:
Q  18 cacgtggcatgtccaatcagcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaa 104  Q
    ||||||||||| | ||| ||| |||||||||||||||||| || ||| || || |  ||||||||||||||||||||| || |||||    
T  46524698 cacgtggcatgccaaataagcgttgacttggtcaaaattggcc-aaaagatcacaattgcaaaggggctaaatcttagggggccaaa 46524613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 109
Target Start/End: Complemental strand, 2940403 - 2940334
Alignment:
Q  40 ttgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgt 109  Q
    ||||||||||||||||| ||  |||||| ||||  ||||||| || |||||||||| ||| |||||||||    
T  2940403 ttgacttggtcaaaattaactaaaaggatcaaaattgcaaagaggttaaatcttaggggatcaaaattgt 2940334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 125
Target Start/End: Original strand, 7675450 - 7675507
Alignment:
Q  68 ccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagg 125  Q
    |||||||||||||||||||||||||||| ||  ||||||| || ||| | ||||||||    
T  7675450 ccaaagatgcaaaggggctaaatcttagggggtcaaaattataatttttttacttagg 7675507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 519 - 560
Target Start/End: Original strand, 29033165 - 29033206
Alignment:
Q  519 gaatgaccaatatatcctttaactgaaataaaaatttcaaat 560  Q
    ||||||| |||||| ||||||||| |||||||||||||||||    
T  29033165 gaatgactaatataccctttaactaaaataaaaatttcaaat 29033206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 120
Target Start/End: Complemental strand, 46066665 - 46066581
Alignment:
Q  35 cagcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtac 120  Q
    |||| |||| |||||||||||||| | ||| || || |||||||||  ||||||||||||| || | ||||||||||||| |||||    
T  46066665 cagcgttgagttggtcaaaattgatcaaaaagatcagagatgcaaattggctaaatcttag-gggctaaaattgtagtttttgtac 46066581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 519 - 560
Target Start/End: Complemental strand, 50501465 - 50501424
Alignment:
Q  519 gaatgaccaatatatcctttaactgaaataaaaatttcaaat 560  Q
    ||||||| |||||| ||||||||| |||||||||||||||||    
T  50501465 gaatgactaatataccctttaactaaaataaaaatttcaaat 50501424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 9e-29; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 22220548 - 22220439
Alignment:
Q  18 cacgtggcatgtccaatcagcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatg 117  Q
    ||||||||||| | |||||||||||||||| |||||||||| | ||||||||||||||||||| |||||||||||||| || ||||||||||||||| |     
T  22220548 cacgtggcatgccaaatcagcattgacttgctcaaaattgatcaaaaggaccaaagatgcaaatgggctaaatcttagggggccaaaattgtagttttta 22220449  T
Q  118 tacttagggg 127  Q
    ||| ||||||    
T  22220448 tacatagggg 22220439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 37 - 125
Target Start/End: Original strand, 30336461 - 30336549
Alignment:
Q  37 gcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagg 125  Q
    |||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||   ||||||||||||| ||||||||||    
T  30336461 gcattgacttggtcaaaattgaccaaaaggaccaaagatgcaaaatggctaaatcttagagggttaaaattgtagtttttgtacttagg 30336549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 48 - 128
Target Start/End: Original strand, 1824049 - 1824129
Alignment:
Q  48 gtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggga 128  Q
    ||||||||||||| |||||||||||||||||||  ||||||||||||| || ||||||||||||||| |||||||||||||    
T  1824049 gtcaaaattgaccaaaaggaccaaagatgcaaaatggctaaatcttagggggccaaaattgtagtttttgtacttagggga 1824129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 48 - 128
Target Start/End: Original strand, 1858494 - 1858574
Alignment:
Q  48 gtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggga 128  Q
    ||||||||||||| |||||||||||||||||||  ||||||||||||| || ||||||||||||||| |||||||||||||    
T  1858494 gtcaaaattgaccaaaaggaccaaagatgcaaaatggctaaatcttagggggccaaaattgtagtttttgtacttagggga 1858574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 48 - 127
Target Start/End: Original strand, 10007734 - 10007813
Alignment:
Q  48 gtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||| ||||||||||||| |||| | ||||||||||    
T  10007734 gtcaaaattgacgaaaaggaccaaagatgcaaaggggctaaatcttaggggaccaaaattgtggtttctatacttagggg 10007813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 22 - 114
Target Start/End: Original strand, 2379869 - 2379961
Alignment:
Q  22 tggcatgtccaatcagcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagttt 114  Q
    ||||||||| ||| ||| ||||||||||||||||||||| |||| |||||||||||||| | |||||||||||  || |||||||||||||||    
T  2379869 tggcatgtcaaataagcgttgacttggtcaaaattgaccaaaagaaccaaagatgcaaatgagctaaatcttaaggggccaaaattgtagttt 2379961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 47 - 127
Target Start/End: Complemental strand, 24123013 - 24122933
Alignment:
Q  47 ggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    |||||||||||||| ||||||||||||||||||||  |||||||||||| |||| |||||| |||||| ||||||||||||    
T  24123013 ggtcaaaattgaccaaaaggaccaaagatgcaaagaagctaaatcttaggggactaaaattatagtttttgtacttagggg 24122933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 40 - 124
Target Start/End: Complemental strand, 30335777 - 30335693
Alignment:
Q  40 ttgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttag 124  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||||||||||| ||   ||||||||| ||| |||||||||    
T  30335777 ttgacttggtcaaaattgaacaaaaggaccaaagatgcaaaggggctaaatcttagggggttaaaattgtaatttttgtacttag 30335693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 40 - 120
Target Start/End: Complemental strand, 43661403 - 43661323
Alignment:
Q  40 ttgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtac 120  Q
    |||||||||||||| |||||| |||| ||||||||||||||||||||||||||||| || |||||||| |||||| |||||    
T  43661403 ttgacttggtcaaagttgaccaaaagaaccaaagatgcaaaggggctaaatcttagggggccaaaattatagtttttgtac 43661323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 48 - 127
Target Start/End: Complemental strand, 5514111 - 5514032
Alignment:
Q  48 gtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    ||||||||||| | ||||||||||||||||||||||||||||| |||| ||  |||||||||||||| ||||||||||||    
T  5514111 gtcaaaattgatcaaaaggaccaaagatgcaaaggggctaaattttaggggggcaaaattgtagtttttgtacttagggg 5514032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 48 - 127
Target Start/End: Complemental strand, 10006474 - 10006395
Alignment:
Q  48 gtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| || |||||||||| ||||   ||||||||||    
T  10006474 gtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaatcttagggggccaaaattgttgttttgatacttagggg 10006395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 481 - 579
Target Start/End: Original strand, 1103858 - 1103956
Alignment:
Q  481 atactactcacactccaaaaaactcaagttacatcttggaatgaccaatatatcctttaactgaaataaaaatttcaaattaatcaaaaactttttcat 579  Q
    ||||||||||||  ||||||||| |||||||||  |  ||||||| |||||| |||||||||||||||||||||||||||||||| |||| | ||||||    
T  1103858 atactactcacatcccaaaaaacacaagttacacttcagaatgactaatataccctttaactgaaataaaaatttcaaattaatctaaaattctttcat 1103956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 32 - 120
Target Start/End: Original strand, 8389644 - 8389732
Alignment:
Q  32 aatcagcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtac 120  Q
    ||||||| ||||||||||||||||||  | ||||||||||| ||| ||||||| |||||||||| |||| ||||||||||||| |||||    
T  8389644 aatcagctttgacttggtcaaaattgttcaaaaggaccaaaaatgtaaaggggttaaatcttaggggactaaaattgtagtttttgtac 8389732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 46 - 120
Target Start/End: Complemental strand, 30569018 - 30568944
Alignment:
Q  46 tggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtac 120  Q
    |||||| ||||| || |||||||||||||||||||||||||||||||||| ||| ||||||| |||||| |||||    
T  30569018 tggtcacaattggccaaaaggaccaaagatgcaaaggggctaaatcttaggggatcaaaattatagtttttgtac 30568944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 54 - 126
Target Start/End: Original strand, 32207302 - 32207374
Alignment:
Q  54 attgacctaaaggaccaaagatgcaaaggggctaaatctt-agaggaccaaaattgtagtttatgtacttaggg 126  Q
    ||||||| |||||||||||||||||||| ||||||||||| ||||| ||||||||||||||| |||||||||||    
T  32207302 attgaccaaaaggaccaaagatgcaaagaggctaaatcttaagagg-ccaaaattgtagtttttgtacttaggg 32207374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 24123868 - 24123916
Alignment:
Q  47 ggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttag 95  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  24123868 ggtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaatcttag 24123916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 40 - 120
Target Start/End: Original strand, 43661786 - 43661866
Alignment:
Q  40 ttgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtac 120  Q
    ||||||||||||||||||| | ||||||||||||||||||  |||| ||||||||| || |||||||| |||||| |||||    
T  43661786 ttgacttggtcaaaattgatcaaaaggaccaaagatgcaattgggcgaaatcttagggggccaaaattttagtttttgtac 43661866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 37 - 128
Target Start/End: Original strand, 18488223 - 18488313
Alignment:
Q  37 gcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggga 128  Q
    ||||||||| |||||||| ||  | ||||||||||||||||||||||| || |||||||||| ||||||||||||||| ||||  |||||||    
T  18488223 gcattgact-ggtcaaaactggtcaaaaggaccaaagatgcaaaggggttatatcttagagggccaaaattgtagtttttgtatatagggga 18488313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 46 - 120
Target Start/End: Original strand, 30570225 - 30570299
Alignment:
Q  46 tggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtac 120  Q
    |||||||||||| || ||||||||||||||||||| |||||||||||||| || |||||||| || ||| |||||    
T  30570225 tggtcaaaattggccaaaaggaccaaagatgcaaaagggctaaatcttagggggccaaaattctaatttttgtac 30570299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 489 - 563
Target Start/End: Complemental strand, 36782342 - 36782268
Alignment:
Q  489 cacactccaaaaaactcaagttacatcttggaatgaccaatatatcctttaactgaaataaaaatttcaaattaa 563  Q
    ||||| ||||||||  ||||||||| ||| ||||||| |||||| ||||||||| ||||||||||||||||||||    
T  36782342 cacaccccaaaaaaaacaagttacaccttagaatgactaatataccctttaactaaaataaaaatttcaaattaa 36782268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 62 - 127
Target Start/End: Complemental strand, 18978135 - 18978070
Alignment:
Q  62 aaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    |||||| ||||| ||||||||||||||||||||  || ||||||||||||||| ||||||||||||    
T  18978135 aaaggatcaaagttgcaaaggggctaaatcttaaggggccaaaattgtagtttttgtacttagggg 18978070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 46 - 127
Target Start/End: Complemental strand, 29043530 - 29043449
Alignment:
Q  46 tggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    |||||||||||| |  |||||| ||||||| ||||||||||||||||||||||   ||||||||||||| ||||| ||||||    
T  29043530 tggtcaaaattgtctaaaaggatcaaagatacaaaggggctaaatcttagagggaaaaaattgtagtttttgtacatagggg 29043449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 49 - 124
Target Start/End: Complemental strand, 1823682 - 1823606
Alignment:
Q  49 tcaaaattgacctaaaggaccaaaga-tgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttag 124  Q
    ||||||||| || ||||||||||| | |||||| |||||||||||||| ||||| |||||||||||| |||||||||    
T  1823682 tcaaaattggccaaaaggaccaaaaaatgcaaatgggctaaatcttaggggaccgaaattgtagtttttgtacttag 1823606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 49 - 124
Target Start/End: Complemental strand, 1858127 - 1858051
Alignment:
Q  49 tcaaaattgacctaaaggaccaaaga-tgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttag 124  Q
    ||||||||| || ||||||||||| | |||||| |||||||||||||| ||||| |||||||||||| |||||||||    
T  1858127 tcaaaattggccaaaaggaccaaaaaatgcaaatgggctaaatcttaggggaccgaaattgtagtttttgtacttag 1858051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 47 - 127
Target Start/End: Complemental strand, 8388593 - 8388513
Alignment:
Q  47 ggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    |||||||||||  | ||||||||||| | |||||||||||||||||||| || |||||||| |||||| ||||| ||||||    
T  8388593 ggtcaaaattgggcaaaaggaccaaaaacgcaaaggggctaaatcttagggggccaaaattatagtttttgtacatagggg 8388513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 48 - 108
Target Start/End: Complemental strand, 11456739 - 11456679
Alignment:
Q  48 gtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattg 108  Q
    ||||||||||||| |||||||||||||||||| ||||||||||| ||| || |||||||||    
T  11456739 gtcaaaattgaccaaaaggaccaaagatgcaatggggctaaatcatagggggccaaaattg 11456679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 47 - 127
Target Start/End: Original strand, 29968307 - 29968387
Alignment:
Q  47 ggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    ||||||||||| || ||| ||  |||| ||||| ||||||||||||||| |||||| ||||||||||| ||||||||||||    
T  29968307 ggtcaaaattggccaaaatgattaaagttgcaatggggctaaatcttaggggaccagaattgtagtttttgtacttagggg 29968387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 488 - 563
Target Start/End: Complemental strand, 29998456 - 29998381
Alignment:
Q  488 tcacactccaaaaaactcaagttacatcttggaatgaccaatatatcctttaactgaaataaaaatttcaaattaa 563  Q
    |||||| ||||||||  ||||||||| ||  ||||||| |||||| ||||||||| ||||||||||||||||||||    
T  29998456 tcacaccccaaaaaaaacaagttacacctcagaatgactaatataccctttaactaaaataaaaatttcaaattaa 29998381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 481 - 571
Target Start/End: Complemental strand, 13175891 - 13175803
Alignment:
Q  481 atactactcacactccaaaaaactcaagttacatcttggaatgaccaatatatcctttaactgaaataaaaatttcaaattaatcaaaaac 571  Q
    |||||||||||||  |||||||| ||| |||||| | | ||||||||||||||||||||||| ||||||||| ||||| |||||| |||||    
T  13175891 atactactcacacctcaaaaaacccaaattacatat-gaaatgaccaatatatcctttaactaaaataaaaa-ttcaatttaatctaaaac 13175803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 119
Target Start/End: Original strand, 40471107 - 40471189
Alignment:
Q  37 gcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgta 119  Q
    ||||||||| |||||||||||||| ||| |||||||||| ||||| || |||||||||  || | ||||||||||||| ||||    
T  40471107 gcattgactcggtcaaaattgaccaaaatgaccaaagatacaaagaggttaaatcttaaggggctaaaattgtagtttttgta 40471189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 2379020 - 2378944
Alignment:
Q  18 cacgtggcatgtccaatcagcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatctta 94  Q
    |||||| |||| | ||| |||||||| |||||||||||||| | |||||||||||||||||||  ||||| ||||||    
T  2379020 cacgtgacatgccaaataagcattgatttggtcaaaattgatcaaaaggaccaaagatgcaaataggctagatctta 2378944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 127
Target Start/End: Complemental strand, 18971041 - 18970961
Alignment:
Q  47 ggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    ||||||||||| |  |||||||||||| |||||||||| ||||||||   ||  |||||||||||||| ||||||||||||    
T  18971041 ggtcaaaattggcaaaaaggaccaaagttgcaaaggggttaaatcttcaggggtcaaaattgtagtttttgtacttagggg 18970961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 488 - 560
Target Start/End: Original strand, 30699333 - 30699405
Alignment:
Q  488 tcacactccaaaaaactcaagttacatcttggaatgaccaatatatcctttaactgaaataaaaatttcaaat 560  Q
    |||||| ||||||||  ||||||||| ||  ||||||| |||||| ||||||||| |||||||||||||||||    
T  30699333 tcacaccccaaaaaaaacaagttacacctcagaatgactaatataccctttaactaaaataaaaatttcaaat 30699405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 519 - 563
Target Start/End: Complemental strand, 31098019 - 31097975
Alignment:
Q  519 gaatgaccaatatatcctttaactgaaataaaaatttcaaattaa 563  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||    
T  31098019 gaatgactaatatatcctttaactaaaataaaaatttcaaattaa 31097975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 48 - 127
Target Start/End: Original strand, 22221335 - 22221414
Alignment:
Q  48 gtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    |||||||||| |  |||||| |||||||| |||||||||||||||||| ||  ||||||||||||||   ||||||||||    
T  22221335 gtcaaaattggctaaaaggatcaaagatgtaaaggggctaaatcttagggggtcaaaattgtagttttaatacttagggg 22221414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 48 - 127
Target Start/End: Original strand, 22227677 - 22227756
Alignment:
Q  48 gtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    |||||||||| |  |||||| |||||||| |||||||||||||||||| ||  ||||||||||||||   ||||||||||    
T  22227677 gtcaaaattggctaaaaggatcaaagatgtaaaggggctaaatcttagggggtcaaaattgtagttttaatacttagggg 22227756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 40 - 119
Target Start/End: Complemental strand, 24359945 - 24359866
Alignment:
Q  40 ttgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgta 119  Q
    |||| |||||||||||||||| ||  ||| |||||||||||  ||||||||||||| ||  |||||||||||||| ||||    
T  24359945 ttgatttggtcaaaattgaccaaagtgactaaagatgcaaataggctaaatcttagggggtcaaaattgtagtttttgta 24359866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 109
Target Start/End: Original strand, 11283152 - 11283241
Alignment:
Q  19 acgtggcatgtccaatcagcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgt 109  Q
    |||||||||| ||| | ||| ||||||| ||||||||||||  ||| || ||||  |||||||||||||||| |||| |||||||||||||    
T  11283152 acgtggcatg-ccactaagcgttgactttgtcaaaattgactaaaatgatcaaaattgcaaaggggctaaattttaggggaccaaaattgt 11283241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 505 - 563
Target Start/End: Complemental strand, 32834945 - 32834887
Alignment:
Q  505 caagttacatcttggaatgaccaatatatcctttaactgaaataaaaatttcaaattaa 563  Q
    |||||||||||   ||||||| |||||| ||||||||| ||||||||||||||||||||    
T  32834945 caagttacatcccagaatgactaatataccctttaactaaaataaaaatttcaaattaa 32834887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 47 - 127
Target Start/End: Original strand, 12353331 - 12353410
Alignment:
Q  47 ggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    |||||||||||||| |||| |  |||  ||||| ||||||||||||||| || |||||||| |||||| ||||||||||||    
T  12353331 ggtcaaaattgaccaaaagaattaaaattgcaatggggctaaatcttagggggccaaaattatagttt-tgtacttagggg 12353410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 49 - 125
Target Start/End: Complemental strand, 17844403 - 17844328
Alignment:
Q  49 tcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagg 125  Q
    ||||||||| || ||||||||||||||  |||| || ||||| |||| |||||||||||||||||| ||||| ||||    
T  17844403 tcaaaattggccaaaaggaccaaagatataaagaggttaaatgttag-ggaccaaaattgtagtttttgtacatagg 17844328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 488 - 560
Target Start/End: Original strand, 35392843 - 35392915
Alignment:
Q  488 tcacactccaaaaaactcaagttacatcttggaatgaccaatatatcctttaactgaaataaaaatttcaaat 560  Q
    |||||| ||||||||  ||||||||| |   ||||||| |||||| ||||||||| |||||||||||||||||    
T  35392843 tcacaccccaaaaaaaacaagttacaccccagaatgactaatataccctttaactaaaataaaaatttcaaat 35392915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 614 - 665
Target Start/End: Complemental strand, 13175763 - 13175712
Alignment:
Q  614 ttcacgtattcatcattcaaaccccataaacttagttcacatattcatcatc 665  Q
    ||||||||||||| |||||||||||| |||||| |||||  |||||||||||    
T  13175763 ttcacgtattcatgattcaaaccccagaaacttggttcatgtattcatcatc 13175712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 94
Target Start/End: Complemental strand, 40469475 - 40469424
Alignment:
Q  43 acttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatctta 94  Q
    |||||||||||||||| | |||| ||||||||| ||||||| ||||||||||    
T  40469475 acttggtcaaaattgatcaaaagaaccaaagatacaaagggactaaatctta 40469424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 66 - 124
Target Start/End: Original strand, 5514260 - 5514317
Alignment:
Q  66 gaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttag 124  Q
    ||||||||||||||| ||||||||| |||||||  |||||||||||||| |||| ||||    
T  5514260 gaccaaagatgcaaatgggctaaattttagagg-tcaaaattgtagtttttgtatttag 5514317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 34 - 84
Target Start/End: Complemental strand, 11289095 - 11289045
Alignment:
Q  34 tcagcattgacttggtcaaaattgacctaaaggaccaaagatgcaaagggg 84  Q
    |||||||||||||||||||||||||||||  || |||||  ||||||||||    
T  11289095 tcagcattgacttggtcaaaattgacctagggggccaaaagtgcaaagggg 11289045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 505 - 563
Target Start/End: Complemental strand, 12987529 - 12987471
Alignment:
Q  505 caagttacatcttggaatgaccaatatatcctttaactgaaataaaaatttcaaattaa 563  Q
    ||||||||| ||  ||||||| |||||  ||||||||| ||||||||||||||||||||    
T  12987529 caagttacacctcagaatgactaatatgccctttaactaaaataaaaatttcaaattaa 12987471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 505 - 563
Target Start/End: Original strand, 24757287 - 24757345
Alignment:
Q  505 caagttacatcttggaatgaccaatatatcctttaactgaaataaaaatttcaaattaa 563  Q
    ||||||||| | | ||||||| | |||| ||||||||| ||||||||||||||||||||    
T  24757287 caagttacaccctagaatgactattataccctttaactaaaataaaaatttcaaattaa 24757345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 48 - 114
Target Start/End: Original strand, 32973907 - 32973973
Alignment:
Q  48 gtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagttt 114  Q
    |||||||||| || |||||||  || |||||||||||||||| | |||||| |||||||||| ||||    
T  32973907 gtcaaaattgtccaaaaggactgaaaatgcaaaggggctaaaacatagagggccaaaattgtggttt 32973973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 62
Target Start/End: Original strand, 6041368 - 6041397
Alignment:
Q  33 atcagcattgacttggtcaaaattgaccta 62  Q
    ||||||||||||||||||||||||||||||    
T  6041368 atcagcattgacttggtcaaaattgaccta 6041397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 62
Target Start/End: Original strand, 6045005 - 6045034
Alignment:
Q  33 atcagcattgacttggtcaaaattgaccta 62  Q
    ||||||||||||||||||||||||||||||    
T  6045005 atcagcattgacttggtcaaaattgaccta 6045034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 109
Target Start/End: Complemental strand, 11282154 - 11282077
Alignment:
Q  32 aatcagcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgt 109  Q
    ||||||| ||||||| ||||||||||| | ||| || ||||  |||||||||| |||||||||| ||  |||||||||    
T  11282154 aatcagcgttgactttgtcaaaattgatcaaaaagatcaaaattgcaaaggggttaaatcttagggggtcaaaattgt 11282077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 124
Target Start/End: Complemental strand, 45112972 - 45112923
Alignment:
Q  75 tgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttag 124  Q
    |||||||||||||| |||||| ||||||||||| || ||| |||||||||    
T  45112972 tgcaaaggggctaattcttaggggaccaaaattataatttttgtacttag 45112923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 64; Significance: 1e-27; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 32 - 127
Target Start/End: Original strand, 46721175 - 46721270
Alignment:
Q  32 aatcagcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    ||||||| |||||||||||||||||||||  |||||||||| |||||||||||||||||||||| |||| ||||||||||||| ||||| ||||||    
T  46721175 aatcagcgttgacttggtcaaaattgaccagaaggaccaaatatgcaaaggggctaaatcttaggggactaaaattgtagtttttgtacatagggg 46721270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 21 - 127
Target Start/End: Complemental strand, 46720097 - 46719992
Alignment:
Q  21 gtggcatgtccaatcagcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtac 120  Q
    |||||||| ||| ||||| |||||||| |||||||||||| ||||||||||| ||||||| ||||||||||||||||||| ||||||||||||| | |||    
T  46720097 gtggcatg-ccattcagcgttgacttgatcaaaattgaccaaaaggaccaaatatgcaaatgggctaaatcttagaggactaaaattgtagtttttatac 46719999  T
Q  121 ttagggg 127  Q
     ||||||    
T  46719998 atagggg 46719992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 40 - 127
Target Start/End: Complemental strand, 7758540 - 7758453
Alignment:
Q  40 ttgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    |||||| |||||||||||||| |||||||||||||| |||||||| |||||||||| || | ||||||||||||| ||||||||||||    
T  7758540 ttgactaggtcaaaattgaccaaaaggaccaaagatacaaaggggttaaatcttagggggcaaaaattgtagtttttgtacttagggg 7758453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 37 - 127
Target Start/End: Complemental strand, 19984989 - 19984900
Alignment:
Q  37 gcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||| |||  |||||||||||||| ||||| ||||||    
T  19984989 gcattgact-ggtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttaaagggtcaaaattgtagtttttgtacatagggg 19984900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 476 - 579
Target Start/End: Complemental strand, 41457590 - 41457487
Alignment:
Q  476 gacagatactactcacactccaaaaaactcaagttacatcttggaatgaccaatatatcctttaactgaaataaaaatttcaaattaatcaaaaactttt 575  Q
    |||| ||||||||||||| ||||||||| ||||||||| |    |||||| |||||||||||||||| |||||||||||||||||||||| |||| | ||    
T  41457590 gacacatactactcacaccccaaaaaacacaagttacaccccataatgactaatatatcctttaactaaaataaaaatttcaaattaatctaaaattctt 41457491  T
Q  576 tcat 579  Q
    ||||    
T  41457490 tcat 41457487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 37 - 114
Target Start/End: Original strand, 19986031 - 19986107
Alignment:
Q  37 gcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagttt 114  Q
    ||||||||| |||||||||||||| ||| ||||||||||||||||||| |||||||||||||  ||||||||||||||    
T  19986031 gcattgact-ggtcaaaattgaccgaaatgaccaaagatgcaaaggggttaaatcttagagggtcaaaattgtagttt 19986107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 40 - 120
Target Start/End: Original strand, 23770370 - 23770450
Alignment:
Q  40 ttgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtac 120  Q
    |||||||||||||| |||||| ||||||| ||||||||||||||| |||||||||| || | ||||||||||||| |||||    
T  23770370 ttgacttggtcaaagttgaccaaaaggactaaagatgcaaaggggttaaatcttagggggctaaaattgtagtttttgtac 23770450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 48 - 108
Target Start/End: Original strand, 47615548 - 47615608
Alignment:
Q  48 gtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattg 108  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| || |||||||||    
T  47615548 gtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaatcttagggggccaaaattg 47615608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 47 - 123
Target Start/End: Original strand, 54540760 - 54540836
Alignment:
Q  47 ggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtactta 123  Q
    |||||||||||||  |||||| ||||| ||||||||||||||||||||| || ||||||||||||||| ||||||||    
T  54540760 ggtcaaaattgacaaaaaggatcaaagttgcaaaggggctaaatcttagggggccaaaattgtagtttttgtactta 54540836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 48 - 127
Target Start/End: Complemental strand, 12700303 - 12700224
Alignment:
Q  48 gtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    ||||||||||||| |||||||||||||||||| | ||||||||| ||| ||  |||||||||||||| ||||||||||||    
T  12700303 gtcaaaattgaccaaaaggaccaaagatgcaatgtggctaaatcatagggggtcaaaattgtagtttttgtacttagggg 12700224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 49 - 127
Target Start/End: Original strand, 34019117 - 34019195
Alignment:
Q  49 tcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    |||||||||||| ||||||||||||||||||| | ||||||| |||| |||||||||||||||| | ||||| ||||||    
T  34019117 tcaaaattgaccaaaaggaccaaagatgcaaatgagctaaattttaggggaccaaaattgtagtgtttgtacctagggg 34019195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 21 - 125
Target Start/End: Complemental strand, 534656 - 534552
Alignment:
Q  21 gtggcatgtccaatcagcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtac 120  Q
    |||||||| | ||||||| |  |||| |||||||||| || || ||||||||||||||||  ||||||||||||| || ||||||||||||||| |||||    
T  534656 gtggcatgccaaatcagcgtacacttagtcaaaattggccaaatggaccaaagatgcaaataggctaaatcttagggggccaaaattgtagtttttgtac 534557  T
Q  121 ttagg 125  Q
     ||||    
T  534556 atagg 534552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 47 - 127
Target Start/End: Complemental strand, 7267774 - 7267694
Alignment:
Q  47 ggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    |||||||||||||| ||||||  |||| ||||| | ||||||||||||| || ||||||||||||||| ||||||||||||    
T  7267774 ggtcaaaattgaccaaaaggattaaagttgcaatgaggctaaatcttagggggccaaaattgtagtttctgtacttagggg 7267694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 128
Target Start/End: Original strand, 51470399 - 51470506
Alignment:
Q  21 gtggcatgtccaatcagcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtac 120  Q
    |||||||| | ||||||| |||||| |||||||||||| | |||||||||||| ||||| || |||||||||||| ||  | ||||||| ||||  ||||    
T  51470399 gtggcatgccaaatcagcgttgactaggtcaaaattgatcaaaaggaccaaagttgcaatggagctaaatcttaggggtgctaaattgtggttttggtac 51470498  T
Q  121 ttagggga 128  Q
    ||||||||    
T  51470499 ttagggga 51470506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 40 - 114
Target Start/End: Complemental strand, 23769994 - 23769921
Alignment:
Q  40 ttgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagttt 114  Q
    ||||||||||||||||||||| ||||||||||||||||||| | || ||||||||| ||  ||||||||||||||    
T  23769994 ttgacttggtcaaaattgaccaaaaggaccaaagatgcaaatgagcgaaatcttag-gggtcaaaattgtagttt 23769921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 21 - 95
Target Start/End: Complemental strand, 51470129 - 51470055
Alignment:
Q  21 gtggcatgtccaatcagcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttag 95  Q
    |||||||| | ||||||| |||||| |||||||||||| | |||||||||||| ||||| |||||||||||||||    
T  51470129 gtggcatgccaaatcagcgttgactaggtcaaaattgatcaaaaggaccaaagttgcaatggggctaaatcttag 51470055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 127
Target Start/End: Original strand, 12703489 - 12703550
Alignment:
Q  66 gaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    |||||||||||||| ||||||||||| ||| || ||||||||||||||| ||||||||||||    
T  12703489 gaccaaagatgcaatggggctaaatcatagggggccaaaattgtagtttttgtacttagggg 12703550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 40 - 128
Target Start/End: Complemental strand, 8456615 - 8456527
Alignment:
Q  40 ttgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggga 128  Q
    |||||| |||||||||||||  |||||| ||||  ||||| | ||||||||||||| || ||||||||||||||| |||| ||||||||    
T  8456615 ttgactaggtcaaaattgactaaaaggatcaaatttgcaatgaggctaaatcttagggggccaaaattgtagtttttgtatttagggga 8456527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 48 - 120
Target Start/End: Complemental strand, 8876036 - 8875964
Alignment:
Q  48 gtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtac 120  Q
    ||||||||||||  ||||||||||| |||||||  ||||||||||||| || ||||||||||||||| |||||    
T  8876036 gtcaaaattgactaaaaggaccaaatatgcaaattggctaaatcttagggggccaaaattgtagtttttgtac 8875964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 488 - 563
Target Start/End: Complemental strand, 10660373 - 10660298
Alignment:
Q  488 tcacactccaaaaaactcaagttacatcttggaatgaccaatatatcctttaactgaaataaaaatttcaaattaa 563  Q
    |||||| ||||||||  ||||||||| | | ||||||| |||||| ||||||||| ||||||||||||||||||||    
T  10660373 tcacaccccaaaaaaaacaagttacaccctagaatgactaatataccctttaactaaaataaaaatttcaaattaa 10660298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 119
Target Start/End: Original strand, 40426741 - 40426820
Alignment:
Q  40 ttgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgta 119  Q
    ||||||||||||||||| ||| |||||||||||||  |||||| |||||||| ||| || ||||||||||| ||| ||||    
T  40426741 ttgacttggtcaaaattaaccaaaaggaccaaagacacaaaggagctaaatcatagggggccaaaattgtaatttttgta 40426820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 48 - 127
Target Start/End: Complemental strand, 47614315 - 47614236
Alignment:
Q  48 gtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    ||||||||| ||| |||| ||||||||||||||| ||||||||||||| || |||||||||| ||||   ||||||||||    
T  47614315 gtcaaaattaaccaaaagcaccaaagatgcaaagaggctaaatcttagggggccaaaattgttgttttgatacttagggg 47614236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 65 - 127
Target Start/End: Original strand, 22776800 - 22776862
Alignment:
Q  65 ggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    |||||||| ||||||||||||||| |||||| || ||||||||||||||| ||||| ||||||    
T  22776800 ggaccaaatatgcaaaggggctaattcttagggggccaaaattgtagtttttgtacatagggg 22776862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 127
Target Start/End: Original strand, 47610536 - 47610630
Alignment:
Q  33 atcagcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    |||||| |||||| |||||||||||  | |||||||||||| ||||| ||||||||||||||| ||  | ||||||| ||||  |||||||||||    
T  47610536 atcagcgttgactaggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggg 47610630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 54986977 - 54987058
Alignment:
Q  47 ggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggga 128  Q
    ||||||||||| || ||| || |||||||||||||| |||||||||||||||  ||||||| |||||| | ||| |||||||    
T  54986977 ggtcaaaattggccaaaatgatcaaagatgcaaaggagctaaatcttagagggtcaaaattatagtttttatacatagggga 54987058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 127
Target Start/End: Complemental strand, 31645104 - 31645024
Alignment:
Q  47 ggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    |||||||||||  | ||||||||||||||||||| ||||||||||||||  |   ||||||||||||| || |||||||||    
T  31645104 ggtcaaaattggtcaaaaggaccaaagatgcaaatgggctaaatcttaggaggttaaaattgtagtttttgcacttagggg 31645024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 48 - 127
Target Start/End: Complemental strand, 29931356 - 29931277
Alignment:
Q  48 gtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    ||||||||||||| ||||||| |    |||||||||| |||||||||| || ||||||||||||||| |||| |||||||    
T  29931356 gtcaaaattgaccaaaaggactattattgcaaaggggttaaatcttagggggccaaaattgtagtttttgtatttagggg 29931277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 48 - 127
Target Start/End: Complemental strand, 29980510 - 29980431
Alignment:
Q  48 gtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    ||||||||||||| ||||||| |    |||||||||| |||||||||| || ||||||||||||||| |||| |||||||    
T  29980510 gtcaaaattgaccaaaaggactattattgcaaaggggttaaatcttagggggccaaaattgtagtttttgtatttagggg 29980431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 40 - 95
Target Start/End: Complemental strand, 47609835 - 47609780
Alignment:
Q  40 ttgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttag 95  Q
    ||||||||||||||||||  | |||||||||||| ||||| |||||||||||||||    
T  47609835 ttgacttggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttag 47609780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 488 - 563
Target Start/End: Original strand, 51166528 - 51166603
Alignment:
Q  488 tcacactccaaaaaactcaagttacatcttggaatgaccaatatatcctttaactgaaataaaaatttcaaattaa 563  Q
    |||||| ||||||||  ||||||||| |   ||||||| |||||| ||||||||| ||||||||||||||||||||    
T  51166528 tcacaccccaaaaaaaacaagttacaccccagaatgactaatataccctttaactaaaataaaaatttcaaattaa 51166603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 48 - 127
Target Start/End: Complemental strand, 54539885 - 54539806
Alignment:
Q  48 gtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    |||||||||| |  |||||| ||||| |||||| | |||||||||||| ||| |||||||||||||| |||| |||||||    
T  54539885 gtcaaaattggcaaaaaggatcaaagttgcaaatgagctaaatcttaggggatcaaaattgtagtttttgtatttagggg 54539806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 505 - 563
Target Start/End: Complemental strand, 3020068 - 3020010
Alignment:
Q  505 caagttacatcttggaatgaccaatatatcctttaactgaaataaaaatttcaaattaa 563  Q
    |||||||||| ||  |||||| |||||| ||||||||| ||||||||||||||||||||    
T  3020068 caagttacattttaaaatgactaatataccctttaactaaaataaaaatttcaaattaa 3020010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 476 - 542
Target Start/End: Original strand, 35512548 - 35512614
Alignment:
Q  476 gacagatactactcacactccaaaaaactcaagttacatcttggaatgaccaatatatcctttaact 542  Q
    |||| ||||||||||||||||||||||| ||||||||| |    |||||| ||||||||||||||||    
T  35512548 gacatatactactcacactccaaaaaacccaagttacaccccataatgactaatatatcctttaact 35512614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 519 - 564
Target Start/End: Original strand, 8067892 - 8067937
Alignment:
Q  519 gaatgaccaatatatcctttaactgaaataaaaatttcaaattaat 564  Q
    ||||||| |||||| ||||||||| |||||||||||||||||||||    
T  8067892 gaatgactaatataccctttaactaaaataaaaatttcaaattaat 8067937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 519 - 563
Target Start/End: Complemental strand, 2446685 - 2446641
Alignment:
Q  519 gaatgaccaatatatcctttaactgaaataaaaatttcaaattaa 563  Q
    ||||||| |||||| ||||||||| ||||||||||||||||||||    
T  2446685 gaatgactaatataccctttaactaaaataaaaatttcaaattaa 2446641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 48 - 128
Target Start/End: Complemental strand, 11670514 - 11670434
Alignment:
Q  48 gtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggga 128  Q
    ||||||||||| | ||||||| ||| |||||| ||| ||||||| ||  ||||||||||| |||||| | |||||||||||    
T  11670514 gtcaaaattgatcaaaaggacaaaaaatgcaatgggactaaatcataagggaccaaaattatagtttttatacttagggga 11670434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 488 - 560
Target Start/End: Complemental strand, 33584113 - 33584041
Alignment:
Q  488 tcacactccaaaaaactcaagttacatcttggaatgaccaatatatcctttaactgaaataaaaatttcaaat 560  Q
    |||||| ||||||||  ||||||||| |   ||||||| |||||| ||||||||| |||||||||||||||||    
T  33584113 tcacaccccaaaaaaaacaagttacaccccagaatgactaatataccctttaactaaaataaaaatttcaaat 33584041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 127
Target Start/End: Original strand, 6171214 - 6171292
Alignment:
Q  48 gtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    |||||||||| || |||||||||||||||||||  |  |||||||||||||  ||||||| |||||| ||||| ||||||    
T  6171214 gtcaaaattggccaaaaggaccaaagatgcaaa-tgtttaaatcttagagggtcaaaattatagtttttgtacatagggg 6171292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 505 - 560
Target Start/End: Complemental strand, 27450167 - 27450112
Alignment:
Q  505 caagttacatcttggaatgaccaatatatcctttaactgaaataaaaatttcaaat 560  Q
    ||||||||| | | ||||||| |||||| ||||||||| |||||||||||||||||    
T  27450167 caagttacaccctagaatgactaatataccctttaactaaaataaaaatttcaaat 27450112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 127
Target Start/End: Original strand, 29932662 - 29932749
Alignment:
Q  40 ttgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    |||||| ||||||||||| || ||||||| |    ||||||||| ||||||||||  ||  |||||||||||||| ||||||||||||    
T  29932662 ttgactaggtcaaaattggccaaaaggactattattgcaaagggactaaatcttaaggggtcaaaattgtagtttttgtacttagggg 29932749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 127
Target Start/End: Original strand, 29981816 - 29981903
Alignment:
Q  40 ttgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    |||||| ||||||||||| || ||||||| |    ||||||||| ||||||||||  ||  |||||||||||||| ||||||||||||    
T  29981816 ttgactaggtcaaaattggccaaaaggactattattgcaaagggactaaatcttaaggggtcaaaattgtagtttttgtacttagggg 29981903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 488 - 563
Target Start/End: Complemental strand, 51755165 - 51755090
Alignment:
Q  488 tcacactccaaaaaactcaagttacatcttggaatgaccaatatatcctttaactgaaataaaaatttcaaattaa 563  Q
    |||||| ||||||||  ||||||||| |   ||||||  |||||| ||||||||| ||||||||||||||||||||    
T  51755165 tcacaccccaaaaaaaacaagttacaccccagaatgattaatataccctttaactaaaataaaaatttcaaattaa 51755090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 488 - 563
Target Start/End: Original strand, 55273600 - 55273674
Alignment:
Q  488 tcacactccaaaaaactcaagttacatcttggaatgaccaatatatcctttaactgaaataaaaatttcaaattaa 563  Q
    |||||| ||||||||  ||||||||| ||  ||||||| |||||| | ||||||| ||||||||||||||||||||    
T  55273600 tcacaccccaaaaaaa-caagttacacctcagaatgactaatataccttttaactaaaataaaaatttcaaattaa 55273674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 34 - 84
Target Start/End: Complemental strand, 8240683 - 8240633
Alignment:
Q  34 tcagcattgacttggtcaaaattgacctaaaggaccaaagatgcaaagggg 84  Q
    |||||||||||||||||||||||||||||  || |||||  ||||||||||    
T  8240683 tcagcattgacttggtcaaaattgacctagggggccaaaagtgcaaagggg 8240633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 506 - 560
Target Start/End: Complemental strand, 24349991 - 24349937
Alignment:
Q  506 aagttacatcttggaatgaccaatatatcctttaactgaaataaaaatttcaaat 560  Q
    |||||||||| | ||||||  |||||| ||||||||| |||||||||||||||||    
T  24349991 aagttacatcctagaatgattaatataccctttaactaaaataaaaatttcaaat 24349937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 519 - 560
Target Start/End: Original strand, 5272878 - 5272919
Alignment:
Q  519 gaatgaccaatatatcctttaactgaaataaaaatttcaaat 560  Q
    ||||||| |||||| ||||||||| |||||||||||||||||    
T  5272878 gaatgactaatataccctttaactaaaataaaaatttcaaat 5272919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 519 - 560
Target Start/End: Original strand, 20607046 - 20607087
Alignment:
Q  519 gaatgaccaatatatcctttaactgaaataaaaatttcaaat 560  Q
    ||||||| |||||| ||||||||| |||||||||||||||||    
T  20607046 gaatgactaatataccctttaactaaaataaaaatttcaaat 20607087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 519 - 560
Target Start/End: Original strand, 26974902 - 26974943
Alignment:
Q  519 gaatgaccaatatatcctttaactgaaataaaaatttcaaat 560  Q
    ||||||| |||||||| ||||||| |||||||||||||||||    
T  26974902 gaatgactaatatatcttttaactaaaataaaaatttcaaat 26974943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 519 - 564
Target Start/End: Complemental strand, 37821808 - 37821763
Alignment:
Q  519 gaatgaccaatatatcctttaactgaaataaaaatttcaaattaat 564  Q
    ||||||| |||||| ||||||||| |||||||||||| ||||||||    
T  37821808 gaatgactaatataccctttaactaaaataaaaattttaaattaat 37821763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 519 - 560
Target Start/End: Complemental strand, 46529269 - 46529228
Alignment:
Q  519 gaatgaccaatatatcctttaactgaaataaaaatttcaaat 560  Q
    ||||||| |||||| ||||||||| |||||||||||||||||    
T  46529269 gaatgactaatataccctttaactaaaataaaaatttcaaat 46529228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 51038731 - 51038840
Alignment:
Q  18 cacgtggcatgtccaatcagcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatg 117  Q
    ||||||||||| | ||||||| |||||| |||||||||||    |||||||||    ||||||||||  || |||||  |||||||||||||||||| ||    
T  51038731 cacgtggcatgccaaatcagcgttgactcggtcaaaattgctaaaaaggaccactattgcaaaggggacaattcttaagggaccaaaattgtagtttttg 51038830  T
Q  118 tacttagggg 127  Q
    | | ||||||    
T  51038831 ttcatagggg 51038840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1303 (Bit Score: 63; Significance: 5e-27; HSPs: 1)
Name: scaffold1303
Description:

Target: scaffold1303; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 21 - 127
Target Start/End: Complemental strand, 1596 - 1490
Alignment:
Q  21 gtggcatgtccaatcagcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtac 120  Q
    |||||||| | ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||  ||||||| |||||| | |||    
T  1596 gtggcatgccaaatcagcattgacttggtcaaaattgaccaaaaggaccaaagatgcaaatgggctaaatcttagggggtcaaaattatagtttttatac 1497  T
Q  121 ttagggg 127  Q
     ||||||    
T  1496 atagggg 1490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 63; Significance: 5e-27; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 1834280 - 1834170
Alignment:
Q  18 cacgtggcatgtccaatcagcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatctta-gaggaccaaaattgtagtttat 116  Q
    ||||||||||| | |||||||||||| |||||||||||||||| ||||||||||||||||||| ||||||||||||| | || ||||||||||||||| |    
T  1834280 cacgtggcatgccaaatcagcattgatttggtcaaaattgaccaaaaggaccaaagatgcaaatgggctaaatcttaggggggccaaaattgtagttttt 1834181  T
Q  117 gtacttagggg 127  Q
     ||| ||||||    
T  1834180 atacatagggg 1834170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 37 - 127
Target Start/End: Original strand, 10448221 - 10448310
Alignment:
Q  37 gcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    ||||||||| ||||||||||| || |||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||||| ||||||    
T  10448221 gcattgact-ggtcaaaattggccaaaaggaccaaagatgcaaaggggctatatcttagagggccaaaattgtagtttttgtacatagggg 10448310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 29 - 127
Target Start/End: Original strand, 49307980 - 49308077
Alignment:
Q  29 tccaatcagcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||  |||||| ||||| ||| ||  |||||||||||||| ||||||||||||    
T  49307980 tccaatcagcattgacttggtcaaaattgacccaaaggaccaaagatgcgcaggggcaaaatcatag-ggggcaaaattgtagtttttgtacttagggg 49308077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 40 - 124
Target Start/End: Original strand, 1290161 - 1290245
Alignment:
Q  40 ttgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttag 124  Q
    |||||| |||||||||||||| ||||||||||||||||||||||| |||||||||| || | ||||||||||||| |||||||||    
T  1290161 ttgactcggtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttagggggctaaaattgtagtttttgtacttag 1290245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 33296381 - 33296276
Alignment:
Q  20 cgtggcatgtccaatcagcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgta 119  Q
    |||||||||||||||||||||||| ||||| |||||||||| ||| || |||||||||||| | |||||||  ||| ||||||||||| |||||| | ||    
T  33296381 cgtggcatgtccaatcagcattgatttggttaaaattgaccaaaatgatcaaagatgcaaatgagctaaattataggggaccaaaattatagtttttata 33296282  T
Q  120 cttagg 125  Q
    ||||||    
T  33296281 cttagg 33296276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 47 - 127
Target Start/End: Complemental strand, 31599920 - 31599840
Alignment:
Q  47 ggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    ||||||||||| |  |||||| ||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  31599920 ggtcaaaattggcaaaaaggatcaaagttgcaaaggggctaaatcttaggggaccaaaattgtagtttttgtacttagggg 31599840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 40 - 114
Target Start/End: Original strand, 13509322 - 13509396
Alignment:
Q  40 ttgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagttt 114  Q
    |||||||||||||||||| || |||||| ||||| ||||||||||||||||||||| ||| ||||||||||||||    
T  13509322 ttgacttggtcaaaattggccaaaaggagcaaaggtgcaaaggggctaaatcttaggggatcaaaattgtagttt 13509396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 21 - 124
Target Start/End: Complemental strand, 25685091 - 25684988
Alignment:
Q  21 gtggcatgtccaatcagcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtac 120  Q
    |||||||| | ||||||| ||||||||||||||||||| | |||||||||||| ||||| ||||||||||||||| ||  | ||||||| ||||  ||||    
T  25685091 gtggcatgccaaatcagcgttgacttggtcaaaattgatcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtac 25684992  T
Q  121 ttag 124  Q
    ||||    
T  25684991 ttag 25684988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 21 - 127
Target Start/End: Complemental strand, 5525516 - 5525410
Alignment:
Q  21 gtggcatgtccaatcagcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtac 120  Q
    |||||||| | ||||||| ||||||||||||||||||  | |||||||||||| ||||| ||||||||||||||| ||  | ||||||| ||||  ||||    
T  5525516 gtggcatgccaaatcagcgttgacttggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtac 5525417  T
Q  121 ttagggg 127  Q
    |||||||    
T  5525416 ttagggg 5525410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 478 - 579
Target Start/End: Original strand, 11379892 - 11379991
Alignment:
Q  478 cagatactactcacactccaaaaaactcaagttacatcttggaatgaccaatatatcctttaactgaaataaaaatttcaaattaatcaaaaactttttc 577  Q
    ||||| |||||||||| |||||||||  |||||||| ||  || |||| |||||||||||||||| |||||||||||||||||||||| |||| | ||||    
T  11379892 cagatgctactcacaccccaaaaaac--aagttacacctccgactgactaatatatcctttaactaaaataaaaatttcaaattaatctaaaattctttc 11379989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 1835043 - 1835152
Alignment:
Q  18 cacgtggcatgtccaatcagcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatg 117  Q
    ||||||||||| | ||| ||| |||||   |||||||||| |  |||||||||||||||||||||||||||||||||| ||  ||||||||||||||       
T  1835043 cacgtggcatgccaaataagcgttgaccaagtcaaaattggctaaaaggaccaaagatgcaaaggggctaaatcttagggggtcaaaattgtagttttaa 1835142  T
Q  118 tacttagggg 127  Q
    ||||||||||    
T  1835143 tacttagggg 1835152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 40 - 125
Target Start/End: Original strand, 37728528 - 37728613
Alignment:
Q  40 ttgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagg 125  Q
    ||||||||||||||||||||  |||||| |||||||||||||  ||||||||||| |||  |||||||||||||| ||||| ||||    
T  37728528 ttgacttggtcaaaattgactaaaaggatcaaagatgcaaagaagctaaatcttaaagggtcaaaattgtagtttttgtacatagg 37728613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 48 - 128
Target Start/End: Complemental strand, 8155867 - 8155787
Alignment:
Q  48 gtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggga 128  Q
    |||||| |||||| ||| ||| |||||||||||| ||||||||||||| || ||||||||||||||| || ||||||||||    
T  8155867 gtcaaagttgaccaaaatgactaaagatgcaaagcggctaaatcttagggggccaaaattgtagtttttgaacttagggga 8155787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 478 - 570
Target Start/End: Complemental strand, 11310066 - 11309974
Alignment:
Q  478 cagatactactcacactccaaaaaactcaagttacatcttggaatgaccaatatatcctttaactgaaataaaaatttcaaattaatcaaaaa 570  Q
    ||||| |||||||||| ||||||||| ||||||||| |   || |||| |||||| ||||||||| |||||||||||||||||||||| ||||    
T  11310066 cagatgctactcacaccccaaaaaacacaagttacaccccagactgactaatataccctttaactaaaataaaaatttcaaattaatctaaaa 11309974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 47 - 127
Target Start/End: Original strand, 35935503 - 35935583
Alignment:
Q  47 ggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    ||||||||||| || ||||||  |||| ||||| | ||||||||||||| || ||||||||||||||||||||||||||||    
T  35935503 ggtcaaaattggccaaaaggattaaagttgcaatgaggctaaatcttagggggccaaaattgtagtttatgtacttagggg 35935583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 476 - 564
Target Start/End: Complemental strand, 44879071 - 44878983
Alignment:
Q  476 gacagatactactcacactccaaaaaactcaagttacatcttggaatgaccaatatatcctttaactgaaataaaaatttcaaattaat 564  Q
    |||||||||||||||||| ||||||||| ||||||||||     |||||| |||||| ||||||||| |||||||||||| ||||||||    
T  44879071 gacagatactactcacaccccaaaaaacacaagttacattccataatgactaatataccctttaactaaaataaaaattttaaattaat 44878983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 40 - 127
Target Start/End: Original strand, 19750538 - 19750625
Alignment:
Q  40 ttgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    ||||||||||||||| ||||| |||||| ||||  ||||| ||||||||||||||| ||   ||||||||||||| ||||||||||||    
T  19750538 ttgacttggtcaaaagtgaccaaaaggatcaaatttgcaatggggctaaatcttaggggggtaaaattgtagtttttgtacttagggg 19750625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 40 - 127
Target Start/End: Complemental strand, 19789268 - 19789181
Alignment:
Q  40 ttgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    ||||||||||||||| ||||| |||||| ||||  ||||| ||||||||||||||| ||   ||||||||||||| ||||||||||||    
T  19789268 ttgacttggtcaaaagtgaccaaaaggatcaaatttgcaatggggctaaatcttaggggggtaaaattgtagtttttgtacttagggg 19789181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 123
Target Start/End: Complemental strand, 49306931 - 49306829
Alignment:
Q  20 cgtggcatgtccaatcagcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgta 119  Q
    ||||||||||||||||| ||||||||| |||||||||||   |||||||||||||||||||  | ||||||| ||  ||  |||||||||||||| ||||    
T  49306931 cgtggcatgtccaatcaacattgactttgtcaaaattgataaaaaggaccaaagatgcaaaatgactaaatcatattgg-gcaaaattgtagtttttgta 49306833  T
Q  120 ctta 123  Q
    ||||    
T  49306832 ctta 49306829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 33 - 95
Target Start/End: Complemental strand, 10470691 - 10470629
Alignment:
Q  33 atcagcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttag 95  Q
    |||||| ||||||||||||||||||| | |||||||||||| ||||| |||||||||||||||    
T  10470691 atcagcgttgacttggtcaaaattgatcaaaaggaccaaagttgcaatggggctaaatcttag 10470629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 40 - 124
Target Start/End: Complemental strand, 1289235 - 1289151
Alignment:
Q  40 ttgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatctt-agaggaccaaaattgtagtttatgtacttag 124  Q
    |||||| |||||||||||||| |||||||||||||||||| |||| |||||||| ||||| | ||||||||||||| | |||||||    
T  1289235 ttgactcggtcaaaattgaccaaaaggaccaaagatgcaagggggttaaatcttaagagg-ctaaaattgtagtttttatacttag 1289151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 488 - 564
Target Start/End: Original strand, 7553489 - 7553565
Alignment:
Q  488 tcacactccaaaaaactcaagttacatcttggaatgaccaatatatcctttaactgaaataaaaatttcaaattaat 564  Q
    |||||| ||||||||  ||||||||| ||  ||||||| |||||| ||||||||| |||||||||||||||||||||    
T  7553489 tcacaccccaaaaaaaacaagttacacctcagaatgactaatataccctttaactaaaataaaaatttcaaattaat 7553565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 47 - 127
Target Start/End: Original strand, 31600955 - 31601035
Alignment:
Q  47 ggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    |||||||||||||  |||||| ||||| |||||| |||||||||||||  ||  |||||||||||||| ||||||||||||    
T  31600955 ggtcaaaattgacaaaaaggatcaaagttgcaaatgggctaaatcttaaggggtcaaaattgtagtttttgtacttagggg 31601035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 47 - 114
Target Start/End: Original strand, 50909642 - 50909710
Alignment:
Q  47 ggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatctt-agaggaccaaaattgtagttt 114  Q
    |||||||||||| | |||||||||||||||||||||||||||||||| || ||  ||||||||||||||    
T  50909642 ggtcaaaattgatcaaaaggaccaaagatgcaaaggggctaaatcttaagggggtcaaaattgtagttt 50909710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 48 - 127
Target Start/End: Complemental strand, 8757804 - 8757725
Alignment:
Q  48 gtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    ||||||||||||| ||||||  |||  ||||| ||||||||||||||  || ||||||||||||||| ||||||||||||    
T  8757804 gtcaaaattgaccaaaaggattaaaattgcaatggggctaaatcttaagggtccaaaattgtagtttctgtacttagggg 8757725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 48 - 123
Target Start/End: Complemental strand, 12129753 - 12129678
Alignment:
Q  48 gtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtactta 123  Q
    ||||||||||| | ||| ||||||||||||||| |||||||||||||  ||  |||||||||||||| ||||||||    
T  12129753 gtcaaaattgatcaaaatgaccaaagatgcaaatgggctaaatcttaaggggtcaaaattgtagtttttgtactta 12129678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 488 - 563
Target Start/End: Original strand, 39677084 - 39677159
Alignment:
Q  488 tcacactccaaaaaactcaagttacatcttggaatgaccaatatatcctttaactgaaataaaaatttcaaattaa 563  Q
    |||||| ||||||||  |||||||||| |  ||||||| |||||| ||||||||| ||||||||||||||||||||    
T  39677084 tcacaccccaaaaaaaacaagttacatttcagaatgactaatataccctttaactaaaataaaaatttcaaattaa 39677159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 488 - 563
Target Start/End: Complemental strand, 45885786 - 45885711
Alignment:
Q  488 tcacactccaaaaaactcaagttacatcttggaatgaccaatatatcctttaactgaaataaaaatttcaaattaa 563  Q
    |||||| ||||||||  ||||||||||||  ||||||| ||||||  |||||||| ||||||||||||||||||||    
T  45885786 tcacaccccaaaaaaaacaagttacatctcagaatgactaatatactctttaactaaaataaaaatttcaaattaa 45885711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 127
Target Start/End: Complemental strand, 10447147 - 10447058
Alignment:
Q  37 gcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    ||||||||| ||| ||||||  || |||||||||||||||||||||||||||||||||| ||   |||||||| |||| ||||| ||||||    
T  10447147 gcattgact-ggttaaaattagccaaaaggaccaaagatgcaaaggggctaaatcttaggggggtaaaattgtggtttttgtacatagggg 10447058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 127
Target Start/End: Original strand, 10471344 - 10471438
Alignment:
Q  33 atcagcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    |||||| |||||| |||||||||||  | |||||||||||| ||||| ||||||||||||||| ||  | ||||||| ||||  |||||||||||    
T  10471344 atcagcgttgactaggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggg 10471438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 95
Target Start/End: Original strand, 13386476 - 13386550
Alignment:
Q  21 gtggcatgtccaatcagcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttag 95  Q
    |||||||| | ||||||| ||||||||||||||||||  | |||||||||||| ||||| ||||||| |||||||    
T  13386476 gtggcatgccaaatcagcgttgacttggtcaaaattggtcaaaaggaccaaagttgcaatggggctagatcttag 13386550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 127
Target Start/End: Original strand, 25685778 - 25685872
Alignment:
Q  33 atcagcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    |||||| |||||| |||||||||||  | |||||||||||| ||||| ||||||||||||||| ||  | ||||||| ||||  |||||||||||    
T  25685778 atcagcgttgactaggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttagggggtctaaattgtggttttggtacttagggg 25685872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 128
Target Start/End: Original strand, 17388182 - 17388262
Alignment:
Q  48 gtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggga 128  Q
    ||||||||||||||||||||| |    || ||||||||||| |||| | || |||||||||||||||||||||||| ||||    
T  17388182 gtcaaaattgacctaaaggactactattgtaaaggggctaattcttggggggccaaaattgtagtttatgtacttaaggga 17388262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 128
Target Start/End: Original strand, 46638680 - 46638776
Alignment:
Q  32 aatcagcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggga 128  Q
    ||||||| ||||||| ||||||||||| | ||| ||| |||| ||||||||| ||||||||||| || | ||||||||| ||| ||| | |||||||    
T  46638680 aatcagcgttgactttgtcaaaattgatcaaaaagactaaagttgcaaagggactaaatcttagggggctaaaattgtaatttttgttcatagggga 46638776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 124
Target Start/End: Original strand, 52491578 - 52491654
Alignment:
Q  48 gtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttag 124  Q
    ||||||||||||| ||||||  |||| ||||| |||||||||| |||| || ||||||||||||||| |||| ||||    
T  52491578 gtcaaaattgaccaaaaggattaaagttgcaatggggctaaattttagggggccaaaattgtagtttctgtatttag 52491654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 114
Target Start/End: Complemental strand, 3927796 - 3927730
Alignment:
Q  48 gtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagttt 114  Q
    |||||||||| || |||||||  || ||||||| |||||||| | ||||||||||||||||||||||    
T  3927796 gtcaaaattgcccaaaaggactgaaaatgcaaatgggctaaaacatagaggaccaaaattgtagttt 3927730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 509 - 563
Target Start/End: Original strand, 7326933 - 7326987
Alignment:
Q  509 ttacatcttggaatgaccaatatatcctttaactgaaataaaaatttcaaattaa 563  Q
    ||||||||| ||||||  |||||| ||||||||| ||||||||||||||||||||    
T  7326933 ttacatcttagaatgattaatataccctttaactaaaataaaaatttcaaattaa 7326987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 127
Target Start/End: Original strand, 8758809 - 8758887
Alignment:
Q  49 tcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    |||||||||||| ||||||  |||  ||||| || |||||||||||  || ||||||||||||||| ||||||||||||    
T  8758809 tcaaaattgaccaaaaggattaaaattgcaatggagctaaatcttaaggggccaaaattgtagtttctgtacttagggg 8758887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 95
Target Start/End: Complemental strand, 13386161 - 13386099
Alignment:
Q  33 atcagcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttag 95  Q
    |||||| |||||| |||||||||||| | |||||||||||| ||||| | |||||||||||||    
T  13386161 atcagcgttgactaggtcaaaattgatcaaaaggaccaaagttgcaatgaggctaaatcttag 13386099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 519 - 560
Target Start/End: Original strand, 3874932 - 3874973
Alignment:
Q  519 gaatgaccaatatatcctttaactgaaataaaaatttcaaat 560  Q
    ||||||| |||||||||||||||| |||||||||||||||||    
T  3874932 gaatgactaatatatcctttaactaaaataaaaatttcaaat 3874973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 48 - 128
Target Start/End: Complemental strand, 17383122 - 17383042
Alignment:
Q  48 gtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggga 128  Q
    ||||||||||||||||||||| |    |||||||||| ||| |||| | || ||||||||||||||| |||||||| ||||    
T  17383122 gtcaaaattgacctaaaggactactattgcaaaggggataattcttggggggccaaaattgtagtttttgtacttaaggga 17383042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 128
Target Start/End: Complemental strand, 35934482 - 35934392
Alignment:
Q  37 gcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggga 128  Q
    ||||||||| |||||||||||||| |||| |  |||| ||||| ||||||||||||||  || |||||||| || ||| | |||||||||||    
T  35934482 gcattgact-ggtcaaaattgaccaaaagaattaaagttgcaatggggctaaatcttaaggggccaaaattataatttctttacttagggga 35934392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 505 - 560
Target Start/End: Original strand, 36224470 - 36224525
Alignment:
Q  505 caagttacatcttggaatgaccaatatatcctttaactgaaataaaaatttcaaat 560  Q
    |||||||||||   ||||||| |||||| ||||||||| |||||||||||||||||    
T  36224470 caagttacatcccagaatgactaatataccctttaactaaaataaaaatttcaaat 36224525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 33 - 95
Target Start/End: Original strand, 5526082 - 5526144
Alignment:
Q  33 atcagcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttag 95  Q
    |||||| |||||| |||||||||||  | |||||||||||  ||||| |||||||||||||||    
T  5526082 atcagcgttgactaggtcaaaattggtcaaaaggaccaaaattgcaatggggctaaatcttag 5526144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 476 - 513
Target Start/End: Original strand, 23114498 - 23114535
Alignment:
Q  476 gacagatactactcacactccaaaaaactcaagttaca 513  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  23114498 gacagatactactcacaccccaaaaaattcaagttaca 23114535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 127
Target Start/End: Complemental strand, 48780364 - 48780299
Alignment:
Q  62 aaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    |||||||||||| ||||| ||||||||||||||| ||  | ||||||| ||||  |||||||||||    
T  48780364 aaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggg 48780299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 519 - 560
Target Start/End: Complemental strand, 50622434 - 50622393
Alignment:
Q  519 gaatgaccaatatatcctttaactgaaataaaaatttcaaat 560  Q
    ||||||| |||||| ||||||||| |||||||||||||||||    
T  50622434 gaatgactaatataccctttaactaaaataaaaatttcaaat 50622393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 494 - 563
Target Start/End: Original strand, 55281644 - 55281713
Alignment:
Q  494 tccaaaaaactcaagttacatcttggaatgaccaatatatcctttaactgaaataaaaatttcaaattaa 563  Q
    |||||||||  ||||||||| |   ||||||  |||||| ||||||||| ||||||||||||||||||||    
T  55281644 tccaaaaaaaacaagttacaccccagaatgattaatataccctttaactaaaataaaaatttcaaattaa 55281713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 48466 - 48358
Alignment:
Q  18 cacgtggcatgtccaatcagcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatg 117  Q
    |||||||||||   ||||| ||||||||||||||||||||||| ||||||||||||||||||||||  |||||||||| ||||||||||| |||||| ||    
T  48466 cacgtggcatgctaaatcaacattgacttggtcaaaattgacc-aaaggaccaaagatgcaaagggaataaatcttaggggaccaaaattatagtttttg 48368  T
Q  118 tacttagggg 127  Q
    ||| ||||||    
T  48367 tacatagggg 48358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 2e-23; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 47 - 127
Target Start/End: Original strand, 1829573 - 1829653
Alignment:
Q  47 ggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||| || ||||||||||||||| | ||||||||||    
T  1829573 ggtcaaaattgaccaaaatgaccaaagatgcaaaggggctaaatcttagggggccaaaattgtagtttttatacttagggg 1829653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 22 - 114
Target Start/End: Complemental strand, 27437984 - 27437892
Alignment:
Q  22 tggcatgtccaatcagcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagttt 114  Q
    ||||||| | ||||||| |||| ||||||||||||| || |||||||||||| |||||||| |||||||||||| ||  ||||||||||||||    
T  27437984 tggcatgccaaatcagcgttgatttggtcaaaattggccaaaaggaccaaagttgcaaaggagctaaatcttagggggtcaaaattgtagttt 27437892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 45 - 126
Target Start/End: Complemental strand, 5658889 - 5658808
Alignment:
Q  45 ttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttaggg 126  Q
    |||||||||||||||| |||||| ||||| |||||| |||||||||||||  ||| |||||||||||||| ||||| |||||    
T  5658889 ttggtcaaaattgaccaaaaggatcaaagttgcaaatgggctaaatcttaagggatcaaaattgtagtttttgtacataggg 5658808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 48 - 127
Target Start/End: Complemental strand, 7315009 - 7314930
Alignment:
Q  48 gtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||| ||  ||||||||| ||||   ||||||||||    
T  7315009 gtcaaaattgaccaaaatgaccaaagatgcaaaggggctaaatcttagggggtcaaaattgttgttttgatacttagggg 7314930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 236 - 287
Target Start/End: Complemental strand, 28899164 - 28899113
Alignment:
Q  236 tgcgttaaccactaaatttgtttttatctaatgttatttgtttaccaaaact 287  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  28899164 tgcgttaaccactaaatttgtttttatctattattatttgtttaccaaaact 28899113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 48 - 114
Target Start/End: Original strand, 7316265 - 7316331
Alignment:
Q  48 gtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagttt 114  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||  || |||||||||| ||||    
T  7316265 gtcaaaattgaccaaaaggaccatagatgcaaaggggctaaatcttaaggggccaaaattgtggttt 7316331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 49 - 127
Target Start/End: Original strand, 16704469 - 16704547
Alignment:
Q  49 tcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    |||||||||||  |||||| || || ||||||| |||||||||||| |||| |||||||||||||| ||||||||||||    
T  16704469 tcaaaattgacaaaaaggatcatagttgcaaagaggctaaatcttaaaggatcaaaattgtagtttttgtacttagggg 16704547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 127
Target Start/End: Complemental strand, 8659410 - 8659316
Alignment:
Q  33 atcagcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    |||||| |||||| |||||||||||  | |||||||||||| ||||| ||||||||||||||| ||  | ||||||| ||||  |||||||||||    
T  8659410 atcagcgttgactaggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggg 8659316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 127
Target Start/End: Original strand, 26949146 - 26949235
Alignment:
Q  37 gcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    ||||||||| |||||||||||| | |||  || ||||||||||||||| ||||||||||| ||  ||||||||||||| | ||||||||||    
T  26949146 gcattgact-ggtcaaaattgatcaaaaacactaaagatgcaaaggggttaaatcttagaagattaaaattgtagtttttatacttagggg 26949235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 95
Target Start/End: Original strand, 34834523 - 34834597
Alignment:
Q  21 gtggcatgtccaatcagcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttag 95  Q
    |||||||| | ||||||| |||||| |||||||||||  | |||||||||||| ||||| |||||||||||||||    
T  34834523 gtggcatgccaaatcagcgttgactaggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttag 34834597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 21 - 90
Target Start/End: Original strand, 3722467 - 3722536
Alignment:
Q  21 gtggcatgtccaatcagcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaat 90  Q
    |||||||| | ||||||| ||||||||||||||||||  | |||||||||||| ||||| ||||||||||    
T  3722467 gtggcatgccaaatcagcgttgacttggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaat 3722536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 62 - 127
Target Start/End: Complemental strand, 10784709 - 10784644
Alignment:
Q  62 aaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    |||||| ||||| ||||||||||||||||||| | || ||||||||||||||| | ||||||||||    
T  10784709 aaaggatcaaagttgcaaaggggctaaatctttgggggccaaaattgtagtttttatacttagggg 10784644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 48 - 124
Target Start/End: Complemental strand, 17496928 - 17496851
Alignment:
Q  48 gtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatctta-gaggaccaaaattgtagtttatgtacttag 124  Q
    ||||||||||| | |||||||||||||||||||| || ||||||||| | || ||||||||| ||||| |||||||||    
T  17496928 gtcaaaattgatcaaaaggaccaaagatgcaaagaggttaaatcttaggggggccaaaattgcagtttttgtacttag 17496851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 123
Target Start/End: Original strand, 26575024 - 26575100
Alignment:
Q  47 ggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtactta 123  Q
    ||||||||||| |  |||||| ||||| |||||||| | |||||||||| || ||||||||||||||| ||||||||    
T  26575024 ggtcaaaattggcaaaaaggatcaaagttgcaaaggagttaaatcttagggggccaaaattgtagtttttgtactta 26575100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 32 - 127
Target Start/End: Original strand, 6842238 - 6842333
Alignment:
Q  32 aatcagcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    ||||||| |||||||||||||||||| || |||||| ||||||||||||  | |||||| |||  | || ||||||||||||| || || ||||||    
T  6842238 aatcagctttgacttggtcaaaattggccaaaaggatcaaagatgcaaacagactaaattttaaggaactaaaattgtagtttttgcacatagggg 6842333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 32 - 127
Target Start/End: Original strand, 8660159 - 8660254
Alignment:
Q  32 aatcagcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    ||||||| ||||||||||||||||||  | |||||| ||||| ||||| || |||||||||||| ||  | ||||||| ||||  |||||||||||    
T  8660159 aatcagcgttgacttggtcaaaattggtcaaaaggatcaaagttgcaatggagctaaatcttaggggggctaaattgtggttttggtacttagggg 8660254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 488 - 563
Target Start/End: Original strand, 18676041 - 18676116
Alignment:
Q  488 tcacactccaaaaaactcaagttacatcttggaatgaccaatatatcctttaactgaaataaaaatttcaaattaa 563  Q
    |||||| ||||||||  ||||||||| |   ||||||| |||||| ||||||||| ||||||||||||||||||||    
T  18676041 tcacaccccaaaaaaaacaagttacaccccagaatgactaatataccctttaactaaaataaaaatttcaaattaa 18676116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 94
Target Start/End: Original strand, 26717072 - 26717130
Alignment:
Q  36 agcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatctta 94  Q
    ||||||||||||||||||||||| | |||||| ||||| |||||| | |||||||||||    
T  26717072 agcattgacttggtcaaaattgatcaaaaggatcaaagttgcaaaagagctaaatctta 26717130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 127
Target Start/End: Original strand, 3333011 - 3333076
Alignment:
Q  62 aaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    |||||| ||||| |||||||||||||||| |||||||   ||||||||||||| ||||| ||||||    
T  3333011 aaaggatcaaagttgcaaaggggctaaattttagagggttaaaattgtagtttttgtacatagggg 3333076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 94
Target Start/End: Complemental strand, 3721757 - 3721696
Alignment:
Q  33 atcagcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatctta 94  Q
    |||||| |||||| |||||||||||  | |||||||||||| ||||| ||||||||||||||    
T  3721757 atcagcgttgactaggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatctta 3721696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 127
Target Start/End: Original strand, 10785898 - 10785963
Alignment:
Q  62 aaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    |||||| ||||| ||||||||||||||||||||  ||   ||||||||||||| ||||||||||||    
T  10785898 aaaggatcaaagttgcaaaggggctaaatcttaaggggttaaaattgtagtttttgtacttagggg 10785963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 124
Target Start/End: Complemental strand, 26574749 - 26574673
Alignment:
Q  47 ggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttag 124  Q
    |||||||||||||  ||| || ||||| ||||||||||||||||||||  ||| ||||| |||||||| |||||||||    
T  26574749 ggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttaagggatcaaaa-tgtagtttttgtacttag 26574673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 519 - 560
Target Start/End: Original strand, 28913542 - 28913583
Alignment:
Q  519 gaatgaccaatatatcctttaactgaaataaaaatttcaaat 560  Q
    ||||||| |||||||||||||||| |||||||||||||||||    
T  28913542 gaatgactaatatatcctttaactaaaataaaaatttcaaat 28913583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 38 - 114
Target Start/End: Original strand, 3333486 - 3333562
Alignment:
Q  38 cattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagttt 114  Q
    ||||||||  |||||||||| || |||||| ||||| ||| ||||||||||||| ||||||   |||||||||||||    
T  3333486 cattgactaagtcaaaattggccaaaaggatcaaagttgcgaaggggctaaatcatagagggttaaaattgtagttt 3333562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 519 - 563
Target Start/End: Complemental strand, 33490419 - 33490375
Alignment:
Q  519 gaatgaccaatatatcctttaactgaaataaaaatttcaaattaa 563  Q
    ||||||| |||||| ||||||||| ||||||||||||||||||||    
T  33490419 gaatgactaatataccctttaactaaaataaaaatttcaaattaa 33490375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 127
Target Start/End: Complemental strand, 34831044 - 34830953
Alignment:
Q  36 agcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    |||||||||| |||||||||||  | || ||||||||| ||||| | ||||||||||||| ||  | ||||||| ||||  |||||||||||    
T  34831044 agcattgactaggtcaaaattggtcaaagggaccaaagttgcaatgtggctaaatcttaggggggctaaattgtggttttggtacttagggg 34830953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 506 - 563
Target Start/End: Original strand, 742223 - 742280
Alignment:
Q  506 aagttacatcttggaatgaccaatatatcctttaactgaaataaaaatttcaaattaa 563  Q
    |||||||| | | ||||||| |||||| | ||||||| ||||||||||||||||||||    
T  742223 aagttacaccctagaatgactaatataccatttaactaaaataaaaatttcaaattaa 742280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 119
Target Start/End: Complemental strand, 6840308 - 6840251
Alignment:
Q  62 aaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgta 119  Q
    |||||| |||||||||||||||  |||||||||||||  ||||||| |||||| ||||    
T  6840308 aaaggatcaaagatgcaaagggattaaatcttagagggtcaaaattatagtttttgta 6840251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 12382652 - 12382761
Alignment:
Q  18 cacgtggcatgtccaatcagcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatg 117  Q
    ||||||||||| | ||| ||| |||||   |||||||||  |  ||||||||||||||||||| ||| |||||||| | ||| ||||||| ||||||       
T  12382652 cacgtggcatgccaaataagcgttgaccaagtcaaaattagctaaaaggaccaaagatgcaaaagggttaaatctttggggatcaaaattatagttttaa 12382751  T
Q  118 tacttagggg 127  Q
    ||||||||||    
T  12382752 tacttagggg 12382761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 22 - 114
Target Start/End: Original strand, 49378 - 49470
Alignment:
Q  22 tggcatgtccaatcagcattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagttt 114  Q
    ||||||| | ||||||| |||| ||||||||||||| || |||||||||||| |||||||| |||||||||||| ||  ||||||||||||||    
T  49378 tggcatgccaaatcagcgttgatttggtcaaaattggccaaaaggaccaaagttgcaaaggagctaaatcttagggggtcaaaattgtagttt 49470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 48; Significance: 5e-18; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 48 - 127
Target Start/End: Complemental strand, 19618 - 19539
Alignment:
Q  48 gtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    ||||||||||||| ||| || |||||||||||||||| |||||||||| ||| |||||||||||||| | ||||||||||    
T  19618 gtcaaaattgaccaaaatgatcaaagatgcaaaggggttaaatcttaggggatcaaaattgtagtttttatacttagggg 19539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0548 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0548
Description:

Target: scaffold0548; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 478 - 570
Target Start/End: Original strand, 8336 - 8428
Alignment:
Q  478 cagatactactcacactccaaaaaactcaagttacatcttggaatgaccaatatatcctttaactgaaataaaaatttcaaattaatcaaaaa 570  Q
    ||||| |||||||||| ||||||||| ||||||||| |   || |||| |||||| ||||||||| |||||||||||||||||||||| ||||    
T  8336 cagatgctactcacaccccaaaaaacacaagttacaccccagactgactaatataccctttaactaaaataaaaatttcaaattaatctaaaa 8428  T

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Target: scaffold2034 (Bit Score: 39; Significance: 0.000000000001; HSPs: 2)
Name: scaffold2034
Description:

Target: scaffold2034; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 128
Target Start/End: Complemental strand, 349 - 283
Alignment:
Q  62 aaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggga 128  Q
    |||||| |||| ||||||||||||||| |||||| ||||||||||| |||||| ||||| |||||||    
T  349 aaaggatcaaatatgcaaaggggctaattcttaggggaccaaaattatagtttttgtacatagggga 283  T

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Target: scaffold2034; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 62 - 120
Target Start/End: Original strand, 963 - 1021
Alignment:
Q  62 aaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtac 120  Q
    ||||||||||| ||||||||||||||| |||| | || |||||||| |||||| |||||    
T  963 aaaggaccaaatatgcaaaggggctaattcttggggggccaaaattatagtttttgtac 1021  T

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Target: scaffold0632 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 120
Target Start/End: Original strand, 3293 - 3351
Alignment:
Q  62 aaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtac 120  Q
    |||||| ||||| ||||||||||||||||||||| ||||||||||| |||||| |||||    
T  3293 aaaggatcaaagttgcaaaggggctaaatcttaggggaccaaaattatagtttttgtac 3351  T

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Target: scaffold0586 (Bit Score: 38; Significance: 0.000000000004; HSPs: 2)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 62 - 127
Target Start/End: Complemental strand, 6459 - 6394
Alignment:
Q  62 aaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    |||||||||||||||||||  ||||||||||||| ||  |||||||||||||| ||||| ||||||    
T  6459 aaaggaccaaagatgcaaaaaggctaaatcttagggggtcaaaattgtagtttttgtacatagggg 6394  T

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Target: scaffold0586; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 125
Target Start/End: Original strand, 8998 - 9074
Alignment:
Q  48 gtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagg 125  Q
    ||||||||||  | |||||| ||||||||||   |||||||||||||| || ||||||||||||||| ||||| ||||    
T  8998 gtcaaaattggtcaaaaggatcaaagatgcatgagggctaaatcttag-gggccaaaattgtagtttttgtacatagg 9074  T

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Target: scaffold0081 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 476 - 565
Target Start/End: Complemental strand, 12286 - 12198
Alignment:
Q  476 gacagatactactcacactccaaaaaactcaagttacatcttggaatgaccaatatatcctttaactgaaataaaaatttcaaattaatc 565  Q
    |||| ||||||||||||||||| ||||| ||||||||| |   ||||||| |||||| ||||||||| |||||||| ||| |||||||||    
T  12286 gacacatactactcacactcca-aaaacacaagttacaccccagaatgactaatataccctttaactaaaataaaatttttaaattaatc 12198  T

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Target: scaffold0049 (Bit Score: 38; Significance: 0.000000000004; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 62 - 127
Target Start/End: Original strand, 7400 - 7465
Alignment:
Q  62 aaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    |||||| ||||| ||||||||||||||||||||| ||  |||||||||||||| ||||| ||||||    
T  7400 aaaggatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttctgtacatagggg 7465  T

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Target: scaffold0049; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 91
Target Start/End: Original strand, 7880 - 7933
Alignment:
Q  38 cattgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatc 91  Q
    ||||||||  |||||||||| || |||||| ||||| |||||||||||||||||    
T  7880 cattgactaagtcaaaattggccaaaaggatcaaagttgcaaaggggctaaatc 7933  T

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Target: scaffold0294 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 40 - 123
Target Start/End: Original strand, 5401 - 5484
Alignment:
Q  40 ttgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtactta 123  Q
    ||||||||||||||||| ||| |||||| ||||  || || ||||||||||||||  ||  |||||||||||||| ||||||||    
T  5401 ttgacttggtcaaaattaaccaaaaggatcaaatttgtaatggggctaaatcttaagggggcaaaattgtagtttttgtactta 5484  T

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Target: scaffold0562 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0562
Description:

Target: scaffold0562; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 519 - 560
Target Start/End: Original strand, 5751 - 5792
Alignment:
Q  519 gaatgaccaatatatcctttaactgaaataaaaatttcaaat 560  Q
    ||||||| |||||||||||||||| |||||||||||||||||    
T  5751 gaatgactaatatatcctttaactaaaataaaaatttcaaat 5792  T

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Target: scaffold0041 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 519 - 563
Target Start/End: Original strand, 104919 - 104963
Alignment:
Q  519 gaatgaccaatatatcctttaactgaaataaaaatttcaaattaa 563  Q
    ||||||| |||||| ||||||||| ||||||||||||||||||||    
T  104919 gaatgactaatataccctttaactaaaataaaaatttcaaattaa 104963  T

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Target: scaffold0112 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 127
Target Start/End: Complemental strand, 37285 - 37198
Alignment:
Q  40 ttgacttggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggg 127  Q
    |||||| |||||||||||||| ||| ||  |||  | ||| ||||||||||| ||| || |||||||||| |||| ||||||||||||    
T  37285 ttgactaggtcaaaattgaccaaaatgatgaaattttcaatggggctaaatcgtagggggccaaaattgttgtttttgtacttagggg 37198  T

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Target: scaffold0017 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 27850 - 27900
Alignment:
Q  34 tcagcattgacttggtcaaaattgacctaaaggaccaaagatgcaaagggg 84  Q
    |||||||||||||||||||||||||||||  || |||||  ||||||||||    
T  27850 tcagcattgacttggtcaaaattgacctagggggccaaaagtgcaaagggg 27900  T

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Target: scaffold0302 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 18746 - 18827
Alignment:
Q  47 ggtcaaaattgacctaaaggaccaaagatgcaaaggggctaaatcttagaggaccaaaattgtagtttatgtacttagggga 128  Q
    |||||||||||||| ||| ||  |||| ||||| |||||||||| |||  || |||||||| |||||| ||||| |||||||    
T  18746 ggtcaaaattgaccaaaatgattaaagttgcaatggggctaaattttaaggggccaaaattatagtttttgtacctagggga 18827  T

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Target: scaffold0057 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 519 - 560
Target Start/End: Original strand, 42060 - 42101
Alignment:
Q  519 gaatgaccaatatatcctttaactgaaataaaaatttcaaat 560  Q
    ||||||| |||||| ||||||||| |||||||||||||||||    
T  42060 gaatgactaatataccctttaactaaaataaaaatttcaaat 42101  T

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